BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486545 Length=1661 Score E Sequences producing significant alignments: (Bits) Value AT3G60730.1 | Symbols: | Plant invertase/pectin methylesterase... 2495 0.0 > AT3G60730.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr3:22444890-22447273 FORWARD LENGTH=1672 Length=1672 Score = 2495 bits (1351), Expect = 0.0 Identities = 1561/1663 (94%), Gaps = 11/1663 (1%) Strand=Plus/Plus Query 1 ACTTAAAACGCATTTCAAGAAAATTACTAAAACACTACAACAATCTTATAATAACATCTA 60 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct 1 ACTTAAAACGCATTTCAAGAAAATTACT-AAACACTACAACAATCTTATAATAACATTTA 59 Query 61 CTAAAAATGTACACGTTTGTAAAAGTAACCGACTTAATCACCATCATGTTCTTGCTAGCC 120 |||||||||| ||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct 60 CTAAAAATGTCCACGTTTGTAAAAGTCACCGACTTAATCACTATCATGTTCTTTCTAGCC 119 Query 121 ATTGCAGCCGTCGTAACCGCCTCAAACACAGCCGAATTGGATGTACTTGAGATGGCTCGA 180 ||||| |||||| |||||||||||||||||||||| |||||||||||||| |||||| || Sbjct 120 ATTGCTGCCGTCATAACCGCCTCAAACACAGCCGAGTTGGATGTACTTGAAATGGCTAGA 179 Query 181 ACAGCTGTGGTTGAAGCCCGGGCTAGTTTTGGGTCAGTGGCTGTGGTTGAGGCAACGAGT 240 || ||||||||||||||| | |||||||||||||| |||||||| ||||||||| ||| Sbjct 180 ACTGCTGTGGTTGAAGCCAAGACTAGTTTTGGGTCAATGGCTGTGACTGAGGCAACTAGT 239 Query 241 GAAGTTGCTACTAGTAGTTATTATAATTTGGGATTAAGTGAATGTGAAAAGCTCTACGAT 300 ||||||| || ||||||||||||| ||||| ||||||||||| || |||||||||||| Sbjct 240 GAAGTTG---CTGGTAGTTATTATAAATTGGGGTTAAGTGAATGCGAGAAGCTCTACGAT 296 Query 301 GTGAGTGAAGCTAGGCTATCGAAACTTGTCGTGGCTCATGAGAATTTTACCGTTGAAGAT 360 | |||||||||||||||||||||||| ||||| | |||||||||||| |||||||||||| Sbjct 297 GAGAGTGAAGCTAGGCTATCGAAACTGGTCGTAGATCATGAGAATTTCACCGTTGAAGAT 356 Query 361 GTTAGAACGTGGCTAAGTGGCGTGCTTGCGAACCATCACACTTGTTTAGACGGTTTGGTT 420 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 357 GTTAGAACGTGGCTAAGTGGCGTGCTTGCGAATCATCACACTTGTTTAGACGGTTTAATT 416 Query 421 CAGCAACGTGAAGGTCATAAGCCTTTGGTCCATAGCAACGTCACGTTCGTGCTCCATGAA 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 417 CAGCAACGTCAAGGTCATAAGCCTTTGGTCCATAGCAACGTCACGTTCGTGCTCCATGAA 476 Query 481 GCTTTGGCTTTCTATAAAAAGTCTAGAGGTCATATGAAAAAGACGCTCCATGGACCAGCT 540 |||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||| Sbjct 477 GCTTTGGCTTTCTACAAAAAGTCTAGAGGTCATATGAAAAAGAGGCTGCATGGACCAGCG 536 Query 541 AGAGAGAACCATGGACCTGAA--AGACCAAAACATGGACCAACGAGATCAAATCATGGAC 598 ||| || ||||||||| || |||||||||||| ||||||||||| |||||||||||| Sbjct 537 AGACAGGGCCATGGACC--AACGAGACCAAAACATAGACCAACGAGACCAAATCATGGAC 594 Query 599 CAGGACGACCAAACCATGAACCATCGAGACCAAACCAAAGCGGTGGAATGTTAGTGTCAT 658 ||||| || || |||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct 595 CAGGAAGATCACACCATGGACCATCAAGACCAAACCAAAACGGTGGAATGTTAGTGTCAT 654 Query 659 GGAATCCAACAAGTTCAAGGGCAGATTTCGTGGTGGCTCAGGACGGTTCGGGGACTCATC 718 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 655 GGAATCCAACAAGTTCAAGGGCAGATTTCGTGGTGGCTCGGGACGGTTCGGCGACTCATC 714 Query 719 GGACGATAAACCAAGCGTTAGCCGCCGTTTCAAGAATGGGTAAAAGTCGGTTGAATAGAG 778 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 715 GGACGATAAACCAAGCATTAGCCGCCGTTTCAAGAATGGGTAAAAGTCGGTTGAATAGAG 774 Query 779 TGATAATCTACATAAAAGCTGGTGTTTATAACGAAAAAGTCGATATAGATAGACACATGA 838 ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 775 TGATAATATACATAAAAGCTGGTGTTTATAACGAAAAAATCGAAATAGATAGACACATGA 834 Query 839 AAAACATCATGCTAGTTGGTGATGGTATGGACCGTACAATCGTCACCAATAACCGAAACG 898 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 835 AAAACATCATGCTAGTTGGTGATGGTATGGACCGTACAATTGTCACCAATAACCGAAACG 894 Query 899 TCCCGGATGGTTCCACGACTTATGGATCAGCGACATTTGGAGTGTCCGGGGATGGATTTT 958 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 895 TCCCGGACGGTTCCACGACTTATGGATCAGCGACATTCGGAGTGTCCGGGGATGGATTTT 954 Query 959 GGGCGCGGGACATGACATTCGAGAACACTGCAGGACCACATAAACACCAAGCTGTGGCGT 1018 |||| |||||||| || |||||||| |||||||||||||||||||| ||||||||||||| Sbjct 955 GGGCACGGGACATAACGTTCGAGAATACTGCAGGACCACATAAACATCAAGCTGTGGCGT 1014 Query 1019 TGAGAGTGAGCTCGGACTTGTCTTTATTCTATCGTTGTAGTTTCAAAGGATATCAAGATA 1078 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1015 TGAGAGTGAGCTCAGACTTGTCTTTATTCTATCGGTGTAGTTTCAAAGGATATCAAGATA 1074 Query 1079 CTCTTTTCACCCACTCACTTCGTCAATTCTACCGAGATTGTCATATTTATGGTACGATTG 1138 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1075 CTCTTTTCACGCACTCACTTCGTCAATTCTACCGCGATTGTCATATTTATGGTACGATTG 1134 Query 1139 ATTTCATATTTGGAGATGCGACAGCTGTTTTTCAGAACTGTGATATATTTGTGAGACGGC 1198 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct 1135 ATTTCATATTTGGAGATGCGGCAGCTGTTTTTCAGAACTGTGATATATTTGTGAGGCGGC 1194 Query 1199 CTATGGATCATCAAGGCAATATGATCACAGCTCAAGGGAGAGACGACCCACATTCAAATT 1258 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct 1195 CTATGGATCATCAAGGCAACATGATCACAGCTCAAGGAAGAGACGACCCACATACAAATT 1254 Query 1259 CAGGCATTTCGATCCAACATTCACGGATCAGGGCCGCACCAGAATTCGAGGCGGTTAAAG 1318 ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| Sbjct 1255 CAGGCATTTCGATCCAACACTCACGGATCAGGGCCGCACCAGAATTCGAAGCAGTTAAAG 1314 Query 1319 GCCGGTTTAAGAGCTACTTGGGCCGGCCATGGAAGAAGTACTCACGGACAGTGCTTCTCA 1378 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1315 GCCGGTTTAAGAGCTACTTGGGCCGGCCATGGAAGAAGTACTCACGGACAGTGTTTCTCA 1374 Query 1379 AAACGGATATCGACGAGTTGATTGACCCGAGAGGGTGGAGAGAATGGAGTGGCAGTTATG 1438 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1375 AAACAGATATCGACGAGTTGATTGACCCGAGAGGGTGGAGAGAATGGAGTGGCAGTTATG 1434 Query 1439 CTCTGTCAACGTTGTATTACGGCGAGTTTATGAACACCGGAGCTGGAGCAGGGACAAGCC 1498 || |||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1435 CTTTGTCGACGTTGTATTACGGCGAGTTTATGAACACCGGAGCTGGAGCAGGGACTGGTA 1494 Query 1499 GAAGGGTGAACTGGCCGGGATTTCACGTCCTTCGCGGCCAGGAGGAGGCTTCTCCGTTCA 1558 ||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||| | Sbjct 1495 GAAGGGTGAACTGGCCGGGATTTCACGTCCTACGCGGTGAGGAAGAGGCTTCTCCGTTTA 1554 Query 1559 CGGTCAGCCGATTCATTCAAGGAGATTCTTGGATCCCTATCACCGGTGTGCCGTTTTCAG 1618 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1555 CCGTCAGCCGATTCATACAAGGAGATTCTTGGATCCCTATCACCGGTGTGCCGTTTTCAG 1614 Query 1619 CCGGGGTTTGAGTCACTTTTGACTCTTGAATGAATCATCAACA 1661 | |||||||||||||||||||| | |||| ||||||||||| Sbjct 1615 CTGGGGTTTGAGTCACTTTTGAAT---GAATAAATCATCAACA 1654 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 82077891075 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5