BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486562 Length=1439 Score E Sequences producing significant alignments: (Bits) Value AT3G60880.2 | Symbols: DHDPS, DHDPS1 | dihydrodipicolinate synt... 2067 0.0 AT2G45440.1 | Symbols: DHDPS2 | dihydrodipicolinate synthase | ... 1035 0.0 > AT3G60880.2 | Symbols: DHDPS, DHDPS1 | dihydrodipicolinate synthase 1 | chr3:22494852-22496697 FORWARD LENGTH=1487 Length=1487 Score = 2067 bits (1119), Expect = 0.0 Identities = 1357/1467 (93%), Gaps = 36/1467 (2%) Strand=Plus/Plus Query 1 TTACTTTTGCCGGAATCTGACGTCAGCATGCCCTGCAACCACTTCCAGAGCTCAATCGAT 60 ||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct 29 TTACTTTTGTCGGAATCTGACGTCAGCAT-ACCTGCTACCACTTCCAGAGTTCAATCGAT 87 Query 61 CTT-GACCTCGTTGCGACGTTTT-CCGCTTCGATTATCGACAGTGTGC-CCACTATTATC 117 ||| | |||||||| ||||||| || ||||||||||| ||||||| | ||||| |||| Sbjct 88 CTTCG-CCTCGTTGAAACGTTTTCCCTCTTCGATTATCAACAGTGT-CTCCACTCGTATC 145 Query 118 ATCACCTCCTACAACTGATTTTGTCTTCTCTCTCGTCGTTCGAATTTGA-T-T-C---T- 170 |||||| ||| ||||| |||||| | |||||||||| |||| ||||||| | | | | Sbjct 146 ATCACCGCCTCCAACTAATTTTGCCATCTCTCTCGTTGTTCCAATTTGATTCTACTAGTG 205 Query 171 A----C----T-ATTTA--------AAAGATGGCAGCTTTGAAAGGTCACGGCTTGATCT 213 | | | ||||| ||||||| ||||||||||| | |||||||||||| Sbjct 206 AGCTCCGATTTAATTTAGGGTTTTGAAAGATGTCAGCTTTGAAAAATTACGGCTTGATCT 265 Query 214 CCATTGACTCTGCCCTCCATTTTCCTCGCTCACATCAATTGGAGAGCTACAAGAGAAGGA 273 ||||||| |||||||||||||||||||| ||| |||||||| ||||||| |||||||||| Sbjct 266 CCATTGATTCTGCCCTCCATTTTCCTCGATCAAATCAATTGCAGAGCTATAAGAGAAGGA 325 Query 274 ATGCGAAATGGGTCTCTCCAAAAGCAGCTGTTGTACCTAACTTCCATCTTCCAATGCGCA 333 |||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 326 ATGCAAAATGGGTCTCTCCAATAGCAGCTGTTGTACCTAACTTCCATCTTCCTATGCGCA 385 Query 334 GTCTCGAGGATAAAAACAGGACAAACACAGACGACATAAGGTCCCTTAGAGTGATCACAG 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 386 GTCTCGAGGATAAAAACAGGACAAACACAGACGACATAAGGTCCCTTAGAGTGATCACAG 445 Query 394 CCATTAAGACACCGTATCTACCTGATGGAAGATTCGATCTCCAAGCGTACGATGACTTAG 453 ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||| Sbjct 446 CCATTAAGACACCGTATTTACCTGATGGAAGATTCGACCTCCAAGCATACGATGACTTAG 505 Query 454 TCAACACGCAGATAGAAAACGGTGCTGAAGGTGTGATTGTTGGTGGTACAACCGGTGAAG 513 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 506 TCAACACGCAGATAGAAAACGGTGCTGAAGGTGTGATTGTTGGTGGTACAACTGGTGAAG 565 Query 514 GCCAATTGATGAGCTGGGATGAGCATATAATGCTTATAGGCCATACCGTAAATTGTTTTG 573 ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct 566 GCCAATTGATGAGCTGGGATGAGCACATAATGCTTATCGGCCATACTGTAAATTGTTTTG 625 Query 574 GCGGAAGAATCAAAGTCATTGGAAACACTGGAAGCAACTCGACTAGGGAAGCTATACATG 633 | ||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 626 GGGGAAGGATCAAAGTCATTGGAAACACTGGAAGTAACTCGACTAGGGAAGCTATTCATG 685 Query 634 CCACTGAGCAAGGATTCGCTGTGGGAATGCACGGGGCACTGCACATTAACCCTTACTATG 693 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 686 CCACTGAGCAAGGATTCGCCATGGGAATGCACGGGGCACTGCACATTAACCCTTACTATG 745 Query 694 GAAAAACATCCATTGAAGGCATGACCGCGCATTTTCAAACCGTTCTTCATATGGGACCGA 753 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 746 GAAAAACATCCATTGAAGGCATGAATGCGCATTTTCAAACCGTTCTTCATATGGGACCGA 805 Query 754 CGATTATATACAATGTGCCAGGTCGAACGAGTCAAGATATACCTCCCCAGGTTATCTTTA 813 | ||||||||||| ||||||||||||||| | || ||||||||||||||||||||||||| Sbjct 806 CTATTATATACAACGTGCCAGGTCGAACGTGCCAGGATATACCTCCCCAGGTTATCTTTA 865 Query 814 AACTCTCTCGGAACCCTAATATGGCTGGGGTTAAGGAATGCGTTGGTAATAACCGAGTTG 873 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 866 AACTCTCTCAGAACCCTAATATGGCTGGGGTTAAGGAATGCGTTGGTAATAACCGAGTTG 925 Query 874 AAGAGTATACTGAGAATGGAATTGTAGTGTGGAGTGGAAATGATGATCAGTGCCATGATT 933 |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct 926 AAGAGTATACTGAGAAGGGAATTGTCGTTTGGAGTGGAAATGATGATCAGTGCCATGATT 985 Query 934 CAAGATGGGATCACGGCGCAACTGGAGTGATATCGGTTACTAGCAATTTAGTTCCGGGTT 993 | |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 986 CTAGATGGGATCACGGTGCCACTGGAGTGATATCGGTTACTAGCAATTTAGTTCCGGGTT 1045 Query 994 TGATGAGGAAGTTAATGTTTGAAGGTAGAAACTCAGCGTTGAACTCAAAGCTACTTCCTC 1053 ||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| Sbjct 1046 TGATGAGGAAGTTGATGTTTGAAGGTAGAAACTCAGCGTTGAACGCAAAGCTTCTTCCTT 1105 Query 1054 TAATGGATTGGCTATTCCAAGAACCCAATCCGATTGGTGTTAATACTGCTTTGGCTCAGT 1113 ||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||||| Sbjct 1106 TAATGGATTGGCTATTCCAAGAACCGAATCCCATTGGTGTAAACACTGCTTTGGCTCAGT 1165 Query 1114 TAGGAGTTGCTAGGCCTGTTTTTCGGTTACCTTATGTGCCATTGCCTCTGTCCAAAAGGA 1173 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1166 TAGGAGTTGCGAGGCCGGTTTTTCGGTTACCTTATGTGCCATTGCCTCTGTCCAAAAGGA 1225 Query 1174 TTGAGTTCG-TAAGGCTGGTGAAGGAAATCGGAAGGGAGCATTTTGTAGGAGACAGAGAT 1232 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1226 TTGAGTTCGTTAA-ACTGGTGAAGGAAATCGGAAGGGAGCATTTTGTAGGAGACAGAGAT 1284 Query 1233 GTTCAGGTACTTGATGATGATGACTTCATCTTAATCGGTCGATATTAGAGTCTCTTCCTT 1292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1285 GTTCAGGTACTTGATGATGATGACTTCATCTTAATCGGTCGATATTAGAGTCTCTTCCCT 1344 Query 1293 GAAGATTGGTTGTGTTTATACTCTCTTCGTTCAGTTATTAGTTATTTAGCTTATGAGAAA 1352 |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| Sbjct 1345 GAAGATTGGTTGTGTTTATACTTTCTTCGTTCAGTTGTTAGTTATTTAGCTGATGAGAAA 1404 Query 1353 CTTACAGATGGATCATAGAGTTGTTCTACTTGTTGTAATGTTTGGTCTGTTACTTTTGGT 1412 || |||||||||||| ||| || ||||||||||||||||||||||||||||||||||| Sbjct 1405 CTCACAGATGGATCA-AGACTT---CTACTTGTTGTAATGTTTGGTCTGTTACTTTTGGT 1460 Query 1413 GATGAATCTGATGGCTTTTGCTTACTC 1439 ||||||||| ||||||||||||||||| Sbjct 1461 GATGAATCTAATGGCTTTTGCTTACTC 1487 > AT2G45440.1 | Symbols: DHDPS2 | dihydrodipicolinate synthase | chr2:18730840-18733015 FORWARD LENGTH=1700 Length=1700 Score = 1035 bits (560), Expect = 0.0 Identities = 939/1121 (84%), Gaps = 30/1121 (3%) Strand=Plus/Plus Query 175 TTTAAAAGATGGCAGCTTTGAAAGGTCACGGCTTGAT-CTCCATTGACTCTGC-CCTCCA 232 ||| ||||||||| |||||||||||| | |||||| | || || |||||||| | || | Sbjct 447 TTTCAAAGATGGCTGCTTTGAAAGGTTATGGCTTG-TGTTCTATGGACTCTGCTCTTCAA 505 Query 233 TTTTCC--TCGCTCACATCAATTGGAGAGCTACAAGAGAAGGA-ATGCGAAATGGGTCTC 289 || || || || | | | ||| | |||||||||||||||| | ||||||||||||| Sbjct 506 TTCCCCTGTC-CT-A-AGCTATTCAATAGCTACAAGAGAAGGAGCT-CGAAATGGGTCTC 561 Query 290 TCCAAAAGCAGCTGTTGTACCTAACTTCCATCTTCCAATGCGCAGTC-TCGAGGATAAAA 348 ||| ||||||||||||||||| || |||||||| ||||||||||| | | |||| ||||| Sbjct 562 TCCCAAAGCAGCTGTTGTACCCAATTTCCATCTCCCAATGCGCAG-CTTGGAGGTTAAAA 620 Query 349 ACAGGACAAACACAGACGACA-TAAGGTCCCTTA-GAGTGATCACAGCCATTAAGACACC 406 ||||||||||||||||||||| ||| | | | || | ||||||||||| || || ||||| Sbjct 621 ACAGGACAAACACAGACGACATTAAAG-CTC-TACGTGTGATCACAGCTATCAAAACACC 678 Query 407 GTATCTACCTGATGGAAGATTCGATCTCCAAGCGTACGATGACTTAGTCAACACGCAGAT 466 |||||||||||||||||||||||| || |||| ||||||||||| ||||||| ||||| Sbjct 679 GTATCTACCTGATGGAAGATTCGACCTTGAAGCCTACGATGACTTGGTCAACATTCAGAT 738 Query 467 AGAAAACGGTGCTGAAGGTGTGATTGTTGGTGGTACAACCGGTGAAGGCCAATTGATGAG 526 | ||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||| Sbjct 739 ACAAAACGGTGCTGAAGGTGTCATTGTTGGTGGTACAACTGGTGAAGGACAACTGATGAG 798 Query 527 CTGGGATGAGCATATAATGCTTATAGGCCATACCGTAAATTGTTTTGGCGGAAGAATCAA 586 |||||| || || || |||||||||||||||||||| || |||||||||||||| ||||| Sbjct 799 CTGGGACGAACACATTATGCTTATAGGCCATACCGTTAACTGTTTTGGCGGAAGCATCAA 858 Query 587 AGTCATTGGAAACACTGGAAGCAACTCGACTAGGGAAGCTATACATGCCACTGAGCAAGG 646 |||||||||||||||||||||||| |||||||| ||||| || || || ||||| ||||| Sbjct 859 AGTCATTGGAAACACTGGAAGCAATTCGACTAGAGAAGCAATCCACGCGACTGAACAAGG 918 Query 647 ATTCGCTGTGGGAATGCACGGGGCACTGCACATTAACCCTTACTATGGAAAAACATCCAT 706 |||||| || |||||||| | || || || || |||||||||||||| || || || || Sbjct 919 ATTCGCGGTTGGAATGCATGCTGCTCTTCATATAAACCCTTACTATGGCAAGACTTCTAT 978 Query 707 TGAAGGCA-TGACCGCGCATTTTCAAACCGTTCTTCATATGGGACCGACGATTATATACA 765 || ||| | ||| || ||||| || | ||||||||||||||||||||||||||||||| Sbjct 979 TG-AGGGACTGATTGCACATTTCCAGTCTGTTCTTCATATGGGACCGACGATTATATACA 1037 Query 766 ATGTGCCAGGTCGAAC-GAGTCAAGATATACCTCCCCAG-GTTATCTTTAAACTCTCTCG 823 ||||||| |||||||| | | ||||||||||| || | | | ||||| ||||| |||| Sbjct 1038 ATGTGCCTGGTCGAACAGGG-CAAGATATACCGCCTC-GTGCCATCTTCAAACTTTCTCA 1095 Query 824 GAACCCTAATATGGCTGGGGTTAAGGAATGCGTTGGTAATAACCGAGTTGAAGAGTATAC 883 ||| || ||| | ||||| || |||||||| ||||| || || ||||| |||||||| || Sbjct 1096 GAATCCGAATTTAGCTGGTGTGAAGGAATGTGTTGGGAACAAGCGAGTCGAAGAGTACAC 1155 Query 884 TGAGAATGGAATTGTAGTGTGGAGTGGAAATGATGATCAGTGCCATGATTCAAGATGGGA 943 ||||||||| |||| ||||||||||| ||||||||| |||| |||||||| |||||||| Sbjct 1156 TGAGAATGGGGTTGTTGTGTGGAGTGGGAATGATGATGAGTGTCATGATTCCAGATGGGA 1215 Query 944 TCACGGCGCAACTGGAGTGATATCGGTTACTAGCAATTTAGTTCCGGGTTTGATGAGGAA 1003 | | || ||||| ||||| ||||| |||||||| |||||||||||||||||||||||||| Sbjct 1216 TTATGGAGCAACAGGAGTTATATCAGTTACTAGTAATTTAGTTCCGGGTTTGATGAGGAA 1275 Query 1004 GTTAATGTTTGAAGGTAGAAACTCAGCGTTGAACTCAAAGCTACTTCCTCTAATGGATTG 1063 ||| |||||||||||||| || ||| | |||||||||||||| || ||| | |||| ||| Sbjct 1276 GTTGATGTTTGAAGGTAGGAATTCATCTTTGAACTCAAAGCTTCTACCTTTGATGGCTTG 1335 Query 1064 GCTATTCCAAGAACCCAATCCGATTGGTGTTAATACTGCTTTGGCTCAG-TTAGGAGTTG 1122 ||| ||||| || || || |||||||| | || ||||||||||||||| || |||||| Sbjct 1336 GCTGTTCCACGAGCCAAACCCGATTGGAATCAACACTGCTTTGGCTCAGCTT-GGAGTTT 1394 Query 1123 CTAGGCCTGTTTTTCGGTTACCTTATGTGCCATTGCCTCTGTCCAAAAGGATTGAGTTCG 1182 | ||||| |||||| ||||||| ||||| |||||||| ||||| || ||| ||||||| | Sbjct 1395 CGAGGCCGGTTTTTAGGTTACCATATGTACCATTGCCACTGTCTAAGAGGCTTGAGTTTG 1454 Query 1183 T-AAGGCTGGTGAAGGAAATCGGAAGGGAGCATTTTGTAGGAGACAGAGATGTTCAGG-T 1240 | || ||||||||||| || ||| | ||||||||||| || || | ||||||||||| | Sbjct 1455 TGAAA-CTGGTGAAGGAGATTGGACGAGAGCATTTTGTGGGTGAGAAAGATGTTCAGGCT 1513 Query 1241 ACTTGATGATGATGACTTCATC-TTAATCGGTCGATATTAG 1280 |||||||||||||| || ||| ||| |||||||||||||| Sbjct 1514 -CTTGATGATGATGATTTTATCCTTA-TCGGTCGATATTAG 1552 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70933370085 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5