BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486584 Length=2510 Score E Sequences producing significant alignments: (Bits) Value AT3G61130.1 | Symbols: GAUT1, LGT1 | galacturonosyltransferase ... 3888 0.0 > AT3G61130.1 | Symbols: GAUT1, LGT1 | galacturonosyltransferase 1 | chr3:22621969-22625716 FORWARD LENGTH=2569 Length=2569 Score = 3888 bits (2105), Expect = 0.0 Identities = 2410/2549 (95%), Gaps = 53/2549 (2%) Strand=Plus/Plus Query 1 AATCGATAAAAGAGATCTGTGTC--AAGTACGCGTGAGGTTCTCTCTTCCCTGCAAACAA 58 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 4 AATCGATAAAAGAGATCTGTGTCAAAAGTACGCGTGAGGTTCTCTCTTCTCTGCAAACAA 63 Query 59 AAATCCTGGCGTTGATAGCGATTGGTTAATTGTCGGTGTATCAACGTTTTTCTGTTGCAC 118 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 64 AAATCCTGGCGTTGATAGCGATTGGTTAATTGTCGGTGAATCAACGTTTTTCTGTTACAC 123 Query 119 ACGTCAATCAATCATCA---tcttc-t--t-tcttcatac-tc-tcttc-t--tc-tt-- 163 | |||||||||||||| ||||| | | ||||| | | || || || | || || Sbjct 124 ATATCAATCAATCATCATCCTCTTCATACTCTCTTC-TTCTTCTTCATCGTAATCATTAG 182 Query 164 cttcaattcctagttttctcttcATCGCCGTTGTGCTAGAG-TTTGTCAGATCTCGCCGG 222 |||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 183 CTTCAATTCCGAGTTTTCTCTTCGTCGCCGTTGTGCTAGAGTTTTGTCAGATCTCGCCGG 242 Query 223 GAAATTCGCAATGGCGTTTTAGTCTGTTTACCTGTGAA--------G----C-CTGGATT 269 |||||| ||||||||||||||||||||||||||||||| | | ||||||| Sbjct 243 GAAATTAGCAATGGCGTTTTAGTCTGTTTACCTGTGAAGCTTTTGCGTAAACGCTGGATT 302 Query 270 CTTCTCAAA--TCTCTGACCTGATCTCTCATTAGATTCCGA--ATGGCGCTAAAGCGAGG 325 ||||||||| ||||| ||||||||||| |||||||||||| ||||||||||||||||| Sbjct 303 CTTCTCAAATCTCTCTCACCTGATCTCTTATTAGATTCCGAGGATGGCGCTAAAGCGAGG 362 Query 326 GCTATCTGGAGTTAACCGGATTAGAGGAAGTGGTGGTGGATCTCGATCTGTACTTGTTCT 385 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 363 GCTATCTGGAGTTAACCGGATTAGAGGAAGTGGTGGTGGATCTCGATCTGTGCTTGTGCT 422 Query 386 GCTCATCTTTTTCTGTGTTTTCGCACCTC-TTGTCTTCTTCGTTGGCCGAGGAGTGTACA 444 ||||| |||||||||||||| ||||||| ||| |||||| ||||||||||||||||| | Sbjct 423 TCTCATATTTTTCTGTGTTTTTGCACCTCTTTG-CTTCTTTGTTGGCCGAGGAGTGTATA 481 Query 445 TCGATTCCTCAACTGATTATTCAAATGCTTCTGTGAAGCAGAATCTTGACTGGAGAGAAC 504 |||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 482 TCGATTCCTCAAATGATTATTCAATTGTTTCTGTGAAGCAGAATCTTGACTGGAGAGAAC 541 Query 505 GTTTAGCAATGCAATCTGTTAGATCTCTTTTCTCGAAAGAGGTACTGGATGTTATCGAAA 564 ||||||||||||||||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 542 GTTTAGCAATGCAATCTGTTAGATCTCTTTTCTCGAAAGAGATACTAGATGTTATAGCAA 601 Query 565 CTAGCACAGCTGATTTGGGTCCTCTTAGCCTTGATTCTTTCAAGAAAAACAATTTGTCTG 624 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 602 CCAGCACAGCTGATTTGGGTCCTCTTAGCCTTGATTCTTTTAAGAAAAACAATTTGTCTG 661 Query 625 CATCATGGCGGGGAGTTGGAGTAGATACCTCCTTTAGACATTCTGAGAACCCAACAACTC 684 |||||||||||||| |||||||| |||||||||||||||||||||| ||| |||||| Sbjct 662 CATCATGGCGGGGAACCGGAGTAGACCCCTCCTTTAGACATTCTGAGAATCCAGCAACTC 721 Query 685 CTGATATCAGATCTAATATCCTGAATGAAAAACGTGACAGCATTTCAAAAGACAGTAGCC 744 ||||| ||| |||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct 722 CTGATGTCAAATCTAATAACCTGAATGAAAAACGTGACAGCATTTCAAAAGATAGTATCC 781 Query 745 ATCAGAAAGTTGAGACACCTACAAAGATTCACAGAAGGCAACTAAGAGAGAAAAGGCGTG 804 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 782 ATCAGAAAGTTGAGACACCTACAAAGATTCACAGAAGGCAACTAAGAGAGAAAAGGCGTG 841 Query 805 AGATGCGAGCAAATGAGTTGGTTCAGCACAATGATGACACAATTTTGAAACTCGAAAATG 864 ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 842 AGATGCGGGCAAATGAGTTAGTTCAGCACAATGATGACACGATTTTGAAACTCGAAAATG 901 Query 865 CGGCCATTGAACGCTCTAAATCTGTTGATTCTGCAGTCCTTGGTAAATACAGTATTTGGA 924 | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 902 CTGCCATTGAACGCTCTAAGTCTGTTGATTCTGCAGTCCTTGGTAAATACAGTATTTGGA 961 Query 925 GAAGAGAAAATGAGAATGACAACTCTGATTCAAATATACGCTTGATGCGGGATCAAGTAA 984 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 962 GAAGAGAAAATGAGAATGACAACTCTGATTCAAATATACGCTTGATGCGGGATCAAGTAA 1021 Query 985 TAATGGCTAGAGTCTATAGTGGGATTGCAAAATTGAAAAACAAGAATGATTTGTTACAAG 1044 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1022 TAATGGCTAGAGTCTATAGTGGGATTGCAAAATTGAAAAACAAGAACGATTTGTTACAAG 1081 Query 1045 AACTCCAGGCCCGACTTAAGGACAGCCAACGGGTTTTGGGGGAATCAACATCTGATGCTG 1104 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1082 AACTCCAGGCCCGACTTAAGGACAGCCAACGGGTTTTGGGGGAAGCAACATCTGATGCTG 1141 Query 1105 ATCTTCCTCGGAGTGCACATGAGAAACTCAGAGCCATGGGTCAAGTCTTGGCTAAAGCTA 1164 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1142 ATCTTCCTCGGAGTGCGCATGAGAAACTCAGAGCCATGGGTCAAGTCTTGGCTAAAGCTA 1201 Query 1165 AGATGCAGTTATATGACTGCAAGTTGGTTACTGGAAAGCTGAGAGCAATGCTTCAGACTG 1224 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1202 AGATGCAGTTATATGACTGCAAGCTGGTTACTGGAAAGCTGAGAGCAATGCTTCAGACTG 1261 Query 1225 CCGACGAACAAGTCAGGAGCTTAAAGAAGCAGAGTACTTTTCTGGCTCAGTTAGCAGCAA 1284 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1262 CCGACGAACAAGTGAGGAGCTTAAAGAAGCAGAGTACTTTTCTGGCTCAGTTAGCAGCAA 1321 Query 1285 AAACAATTCCAAATCCTATCCATTGCCTATCGATGCGCTTGACCATCGATTACTATCTTC 1344 |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 1322 AAACCATTCCAAATCCTATCCATTGCCTATCAATGCGCTTGACTATCGATTACTATCTTC 1381 Query 1345 TGTCTCCAGAGAAAAGAAAATTCCCTCGGAGTGAAAACCTAGAAAACCCTAATCTTTATC 1404 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1382 TGTCTCCGGAGAAAAGAAAATTCCCTCGGAGTGAAAACCTAGAAAACCCTAATCTTTATC 1441 Query 1405 ATTATGCCCTCTTTTCTGACAATGTACTAGCTGCATCAGTGGTTGTTAACTCAACCATCA 1464 |||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 1442 ATTATGCCCTCTTTTCCGACAATGTATTAGCTGCATCAGTAGTTGTTAACTCAACCATCA 1501 Query 1465 TGAATGCCAAGGATCCTTCTAAGCATGTTTTTCACCTTGTCACGGATAAACTGAATTTTG 1524 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 1502 TGAATGCCAAGGATCCTTCTAAGCATGTTTTTCACCTTGTCACGGATAAACTCAATTTCG 1561 Query 1525 GAGCAATGAACATGTGGTTCCTCCTAAACCCACCCGGAAAGGCAACCATACATGTGGAAA 1584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1562 GAGCAATGAACATGTGGTTCCTCCTAAACCCACCCGGAAAGGCAACCATACATGTGGAAA 1621 Query 1585 ACGTTGATGAGTTTAAGTGGCTCAATTCATCTTACTGCCCTGTCCTTCGTCAGCTTGAAT 1644 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1622 ACGTCGATGAGTTTAAGTGGCTCAATTCATCTTACTGTCCTGTCCTTCGTCAGCTTGAAT 1681 Query 1645 CTGCAGCAATGAGAGAATACTATTTTAAAGCAGACCATCCAACTTCAGGCTCTTCAAATC 1704 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 1682 CTGCAGCAATGAGAGAGTACTATTTTAAAGCAGACCATCCAACTTCAGGCTCTTCGAATC 1741 Query 1705 TGAAATATAGAAACCCAAAGTATCTATCCATGTTGAATCACTTGAGATTCTACCTCCCTG 1764 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1742 TAAAATACAGAAACCCAAAGTATCTATCCATGTTGAATCACTTGAGATTCTACCTCCCTG 1801 Query 1765 AGGTTTATCCCAAGCTGAACAAAATCCTCTTCCTGGACGACGACATCATTGTTCAGAAAG 1824 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1802 AGGTTTATCCCAAGCTGAACAAAATCCTCTTCCTGGACGATGACATCATTGTTCAGAAAG 1861 Query 1825 ACTTGACTCCACTCTGGGAAGTTAACCTGAACGGCAAAGTCAACGGTGCAGTTGAAACCT 1884 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1862 ACTTGACTCCACTCTGGGAAGTTAACCTGAACGGCAAAGTCAACGGTGCAGTCGAAACCT 1921 Query 1885 GTGGGGAAAGTTTCCACAGATTCGACAAGTATCTTAACTTTTCGAATCCTCACATTGCGA 1944 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1922 GTGGGGAAAGTTTCCACAGATTCGACAAGTATCTCAACTTTTCGAATCCTCACATTGCGA 1981 Query 1945 GGAACTTCAATCCAAATGCTTGTGGATGGGCTTATGGAATGAACATGTTCGACCTAAAGG 2004 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1982 GGAACTTCAATCCAAATGCTTGTGGATGGGCTTATGGAATGAACATGTTCGACCTAAAGG 2041 Query 2005 AATGGAAGAAGAGAGACATCACTGGTATATACCATAAGTGGCAAAACATGAATGAGAACA 2064 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2042 AATGGAAGAAGAGAGACATCACTGGTATATACCACAAGTGGCAAAACATGAATGAGAACA 2101 Query 2065 GGACACTATGGAAACTAGGGACATTACCACCAGGATTAATAACATTCTACGGATTAACAC 2124 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2102 GGACACTATGGAAGCTAGGGACATTGCCACCAGGATTAATAACATTCTACGGATTAACAC 2161 Query 2125 ATCCCTTAAACAAGGCGTGGCATGTGCTTGGACTTGGATATAATCCGAGTATTGATAGGA 2184 |||||||||||||||||||||||||||| |||||||||||||| |||||||| || | || Sbjct 2162 ATCCCTTAAACAAGGCGTGGCATGTGCTGGGACTTGGATATAACCCGAGTATCGACAAGA 2221 Query 2185 AAGACATTGAGAATGCAGCAGTGGTTCACTATAACGGGAACATGAAACCTTGGTTGGAGT 2244 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2222 AGGACATTGAGAATGCAGCAGTGGTTCACTATAACGGGAACATGAAACCATGGTTGGAGT 2281 Query 2245 TGGCAATGTCCAAGTATCGGCCGTATTGGACCAAGTACATCAAGTTTGATCACCCATATC 2304 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2282 TGGCAATGTCCAAATATCGGCCGTATTGGACCAAGTACATCAAGTTTGATCACCCATATC 2341 Query 2305 TACGTCGATGCAACCTTCATGAATAAA-TCAAATCTTTGTTAGATGATTTGAGGTAATTA 2363 | ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2342 TTCGTCGTTGCAACCTTCATGAATAAAATCAAATCTTTGTTAGATGATTTGAGGTAATTA 2401 Query 2364 CTTCTAATGCTCTGTTGTTCCCATCTC-ATTCCTCTTTATTCCACAGATTGTTAATTGTT 2422 ||||||||| |||||||||||||| || ||| |||||||||||||| ||||||||||||| Sbjct 2402 CTTCTAATGTTCTGTTGTTCCCAT-TCCATTGCTCTTTATTCCACACATTGTTAATTGTT 2460 Query 2423 TATTCATATC-TTTGTTTAGTCAttcttttctctttcttcttcttcttcttctttcGGGC 2481 |||||||||| ||| ||||||||||||||||| | || ||||||||| | | ||| Sbjct 2461 TATTCATATCGTTT-TTTAGTCATTCTTTTCT-T--CT-CTTCTTCTT-T-C----GGGT 2509 Query 2482 TAAAAACACTTGTGTTATTTTTTGAGTTT 2510 ||||||||||| ||||||||||||||||| Sbjct 2510 TAAAAACACTTATGTTATTTTTTGAGTTT 2538 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 124564519469 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5