BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486601
Length=2313
Score E
Sequences producing significant alignments: (Bits) Value
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prot... 3273 0.0
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prot... 1452 0.0
> AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666183-22669757 FORWARD LENGTH=2402
Length=2402
Score = 3273 bits (1772), Expect = 0.0
Identities = 2086/2228 (94%), Gaps = 59/2228 (3%)
Strand=Plus/Plus
Query 81 CTTCTTCTTCAGATTG-TGATAATTCCAATCGGAACTCTCGATTCGCTTTCTTCTCCAGT 139
||||||||| |||||| || ||||||||||||||||||||||||||||||||||||| ||
Sbjct 129 CTTCTTCTTTAGATTGTTG-TAATTCCAATCGGAACTCTCGATTCGCTTTCTTCTCC-GT 186
Query 140 T-TT-TCTGGCGGACCGGTTTTGTGG--TTTTATTTGAACATTCCCGATCTTGCCCTGAG 195
| || | ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 187 TCTTCTGTGGCGGACCGGTTTTGTGGTTTTTTATTTGAACATTCCCGATCTTGCCCTGAG 246
Query 196 TTCCATGATCAGTTTCTTTAAACCCTAGGTTTTCA-ACGAGCA------ttct-c---tt 244
||||| ||||||||||||||||||||||||||| | || |||| |||| | ||
Sbjct 247 TTCCACGATCAGTTTCTTTAAACCCTAGGTTTT-ACACAAGCATTCTGTTTCTCCAGATT 305
Query 245 -t--c--tctctttcgttctcttcttTGTAGTTTTTGTAAAAGGTATTTTCGGTAGATTT 299
| | |||||||||||| |||||||||| |||||||||||||| |||||||||||||
Sbjct 306 ATCGCAGACTCTTTCGTTCTATTCTTTGTAG-TTTTGTAAAAGGTA-TTTCGGTAGATTT 363
Query 300 AGGGTTTGTCTGTCTCTAGTTTTCGAGATCGAGAGAGATTTGTGATG-A-A-TAACAGAG 356
||||||||||||| ||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct 364 AGGGTTTGTCTGTGTCTAGTTTTCGAGATCGAGAGAGATTTGTGATGAATACTAACAGAG 423
Query 357 GAAGATATCCACCGGGTGTTGGAACCGGACGTGGTGCGCCGCCGAATCCAGA-T-T-ATC 413
||||||||||||||||||||||||| || ||||||||||| ||||||||||| | | |||
Sbjct 424 GAAGATATCCACCGGGTGTTGGAACGGGTCGTGGTGCGCCTCCGAATCCAGATTATCATC 483
Query 414 AGTCGTATCGGCAGCAAC-A--ACCTCAAGATCAGCAGTATGTTCAACGCGGTTATTCGC 470
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |
Sbjct 484 AGTCGTATCGGCAGCAACAACCACCTCAAGATCAGCAGTATGTTCAACGCGGTTATTCTC 543
Query 471 AGAATCCTCAGCAGATGCAACTGCAGCAACAACATCATCAACAGCAACAGCAGCAACAGT 530
|||| ||||||||||||||||| |||||||||||||| ||||| || |||||||||||||
Sbjct 544 AGAACCCTCAGCAGATGCAACTCCAGCAACAACATCAACAACAACAGCAGCAGCAACAGT 603
Query 531 GGTCAAGACGCCCTCAGCTTCCTGGAAACGCTAGTAACGCTAACGA---GGTTCAACAGA 587
||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||
Sbjct 604 GGTCAAGACGCCCTCAGCTTCCTGGAAACGCTAGTAACGCTAATGAGGTGGTTCAGCAGA 663
Query 588 CGTCTCAGCCCGAAACTAGCAGCGATGCTAATGGTCAAGACTGGAAGGCAACGTTAAGGC 647
|| | ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 664 CGACCCAGCCCGAAGCTAGCAGCGATGCTAATGGTCAAGACTGGAAGGCTACGTTAAGGC 723
Query 648 TCCCACCTCCTGATACTCGTTATCAGACAGCGGATGTGACAGCTACGAAA-GGAAATGAA 706
| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 724 TACCACCTCCTGATACTCGTTATCAGACAGCGGATGTGACAGCTAC-AAAGGGAAATGAA 782
Query 707 TTCGAAGATTACTTTCTGAAAAGAGATCTGTTAAAGGGAATATATGAGAAGGGTTTTGAG 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 783 TTCGAAGATTACTTTCTGAAAAGAGATCTGTTAAAGGGAATATATGAGAAGGGTTTTGAG 842
Query 767 AAGCCATCTCCAATTCAAGAAGAGAGCATTCCAATCGCTTTAACTGGTAGTGATATTCTT 826
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 843 AAGCCATCTCCAATTCAAGAAGAGAGCATTCCAATTGCTTTAACTGGTAGTGATATTCTT 902
Query 827 GCTAGAGCCAAAAACGGTACAGGAAAGACTGGTGCCTTCTGCATTCCAGTCCTCGAGAAA 886
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 903 GCTAGAGCTAAAAACGGTACAGGAAAGACTGGTGCCTTCTGCATTCCAGTCCTCGAGAAA 962
Query 887 ATTGATCCATCTAACAACGTTATTCAAGCCATGATTCTAGTTCCAACGCGAGAGCTGGCC 946
||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATTGACCCAAATAACAATGTTATTCAAGCCATGATTCTAGTTCCAACGCGAGAGCTGGCC 1022
Query 947 CTTCAGACATCACAAGTTTGCAAGGAGCTTTCCAAATATCTGAATATCCAGGTTATGGTC 1006
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1023 CTTCAGACATCACAAGTTTGCAAGGAGCTTTCCAAATATTTGAATATCCAGGTTATGGTC 1082
Query 1007 ACTACTGGCGGTACCAGTCTGAGAGATGATATTATGCGATTACATCAGCCTGTGCATCTA 1066
|| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1083 ACCACTGGCGGTACCAGTCTGAGAGATGATATTATGCGATTACATCAACCTGTGCATCTG 1142
Query 1067 CTGGTTGGAACTCCTGGAAGAATATTGGATCTTACAAAAAAGGGTGTCTGTGTTTTGAAA 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1143 CTGGTTGGAACTCCTGGAAGAATATTGGATCTTACAAAAAAGGGTGTCTGTGTTTTGAAA 1202
Query 1127 GACTGTGCGATGCTTGTAATGGATGAGGCCGACAAGCTTTTATCTGCGGAATTCCAACCT 1186
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1203 GACTGTGCGATGCTTGTAATGGATGAGGCCGACAAGCTTTTGTCTGCAGAATTCCAACCT 1262
Query 1187 TCTCTTGAGGAATTGATACAGTTTCTGCCCCAAAATCGTCAATTTTTGATGTTTTCTGCT 1246
||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| ||
Sbjct 1263 TCTCTAGAGGAATTGATACAGTTTCTACCCCAAAATCGTCAGTTTTTGATGTTTTCCGCC 1322
Query 1247 ACATTCCCTGTCACTGTGAAGGCTTTTAAGGATCGACATCTCCGGAAGCCCTATGTTATC 1306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1323 ACATTCCCTGTCACTGTTAAGGCTTTTAAGGATCGACATCTCCGGAAGCCCTATGTTATC 1382
Query 1307 AATCTCATGGATCAACTCACGCTTATGGGTGTCACGCAATATTATGCTTTTGTTGAAGAA 1366
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1383 AATCTCATGGATCAACTCACGCTTATGGGTGTCACGCAATATTATGCTTTTGTCGAAGAA 1442
Query 1367 AGACAGAAGGTTCACTGCCTCAACACACTTTTCTCTAAGCTGCAAATAAATCAATCGATA 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1443 AGACAGAAGGTTCACTGCCTCAACACACTTTTCTCTAAGCTGCAAATAAATCAATCGATA 1502
Query 1427 ATCTTTTGCAACTCTGTCAATCGCGTGGAGCTGTTGGCTAAGAAAATCACAGAACTTGGT 1486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1503 ATCTTTTGCAACTCTGTCAATCGCGTGGAGCTGTTGGCTAAGAAAATCACAGAACTTGGT 1562
Query 1487 TATTCATGCTTCTACATTCATGCGAAGATGGTTCAAGACCATAGGAACAGAGTATTCCAC 1546
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 1563 TATTCATGCTTCTACATTCATGCAAAGATGGTTCAAGACCACAGGAACAGAGTATTCCAC 1622
Query 1547 GAGTTCCGCAATGGTGCCTGCAGGAATCTCGTTTGCACTGATCTGTTTACTCGAGGAATT 1606
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623 GAGTTCCGCAATGGTGCTTGCAGGAATCTCGTTTGCACTGATCTGTTTACTCGAGGAATT 1682
Query 1607 GACATTCAAGCTGTGAATGTAGTGATCAACTTCGATTTTCCAAGGACTTCTGAGTCATAT 1666
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct 1683 GACATTCAAGCTGTGAATGTCGTGATCAACTTTGATTTTCCTAGGACTTCTGAGTCATAT 1742
Query 1667 CTACACAGGGTGGGCCGATCAGGACGGTTTGGACACCTTGGGTTGGCTGTGAATTTGGTA 1726
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1743 CTACACAGGGTGGGTCGATCAGGACGGTTTGGACACCTTGGATTGGCTGTGAATTTGGTA 1802
Query 1727 ACTTACGAGGACCGTTTCAAAATGTATCAGACTGAACAAGAACTTGGGACTGAAATCAAA 1786
||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1803 ACTTATGAGGACCGTTTCAAAATGTATCAGACTGAGCAAGAACTTGGGACCGAAATCAAA 1862
Query 1787 CCAATTCCTTCTAATATCGATCAAGCTATCTACTGTCAGTAAACTTGTAACCGTGCATGA 1846
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 1863 CCAATTCCTTCTAATATCGATCAAGCAATCTACTGTCAGTAAACTTGTAACTGTGCATGA 1922
Query 1847 AACGTGTCTCCACCCGAGGAGAGATACAGGATGATTAAAATGGTGTTTCTCAAGCTCGAT 1906
||||||||||||||| | ||||| |||| |||| |||||||||||||||||||||||||
Sbjct 1923 AACGTGTCTCCACCCAATGAGAGGTACAAGATGGTTAAAATGGTGTTTCTCAAGCTCGAG 1982
Query 1907 GGGAGGAGATGAGGCAACAAGTACTTGGCGGTTCATGTAAAGACTCGTTACTGAGTGGTT 1966
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct 1983 GGGAGGAGATGAGGCAACTAGTACTTGGCGGTTCATGTAAAGACTCGTTACTCAGTGGTT 2042
Query 1967 TGGTTTCTAATCTCTCTTTAAGACT-TATGTTTTCTGGTTCTATG-AAACCTTTTTACGT 2024
||||| |||||||||||| ||||| | |||| |||||||||||| |||||| ||||||
Sbjct 2043 TGGTTCCTAATCTCTCTTAAAGACACT-TGTTATCTGGTTCTATGGAAACCTCTTTACGC 2101
Query 2025 TGCACTTATTATGAGACTCTCTTTTGACTTGGTTAGTAATAAAGATAGACCGTATGACTC 2084
||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||
Sbjct 2102 TGCACTTATTATGAGACTCCCTTT-GACTTGGTTAGTAATAAAGATAGAACGTATGACTC 2160
Query 2085 TCCTCTTTTTTATTTTCGTGTTGGGCTTTGTTTGGAATTATAAAGCCCACTTAGGATC-T 2143
||||||||||||||||||||||||||| ||||||||||||| || ||| || |
Sbjct 2161 TCCTCTTTTTTATTTTCGTGTTGGGCTCTGTTTGGAATTATGG-GCT---TTA---TCCT 2213
Query 2144 CTTTA--ATCT-TT-ATCATGAAAGTTGCACTTTTTAATTTTTGCTTCCCCAAGGAATTA 2199
|||| |||| || |||||||||||||||||| ||||||||||||||| | |||||||
Sbjct 2214 ATTTAGGATCTATTTATCATGAAAGTTGCACTTCTTAATTTTTGCTTCCAC--GGAATTA 2271
Query 2200 TTTGGATTTT-CCAAAATAGTTTCTTCCGCATGCTTATTATTCTCGTTTGGTTTTAAGCT 2258
||| |||||| |||||||| |||||||| ||||||||||||||| ||||||| |||||||
Sbjct 2272 TTTTGATTTTTCCAAAATATTTTCTTCCACATGCTTATTATTCTAGTTTGGTATTAAGCT 2331
Query 2259 ATTTTCGT 2266
||||||||
Sbjct 2332 ATTTTCGT 2339
Score = 124 bits (67), Expect = 3e-27
Identities = 77/81 (95%), Gaps = 3/81 (4%)
Strand=Plus/Plus
Query 1 GGAGAAAATCCATTGACGCCCTAACaaaaaaaGACGCCGGCGAGTGTATTCGTCACTTTC 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1 GGAGAAAATCCATTGACGCCCTAAC---AAAAGACGCCGGCGAGTGTATTCGTCACTTTC 57
Query 61 TCTAGTTTCCTCTAACCCAAC 81
||||||||||| |||||||||
Sbjct 58 TCTAGTTTCCTGTAACCCAAC 78
> AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859599-18862918 FORWARD LENGTH=2329
Length=2329
Score = 1452 bits (786), Expect = 0.0
Identities = 1208/1411 (86%), Gaps = 32/1411 (2%)
Strand=Plus/Plus
Query 442 TCAGCAGTATGTTCAACGCGGTTAT--TC-GCAGAATCCTCAGC-AGATGCAACT---GC 494
||||||||| ||||| || |||||| | ||||| || |||| | | |||||| ||
Sbjct 429 TCAGCAGTACGTTCAGCGAGGTTATCCCCAGCAGATTCAACAGCAACA-GCAACTGCAGC 487
Query 495 AGCAACAACATCATCAACAGCAACAGC-AG--CAACAGTGGTCAAGACGCCCTCAGCTTC 551
|||||||||| || |||||||| |||| || ||||| ||||| |||| |||||||||
Sbjct 488 AGCAACAACAACAACAACAGCAGCAGCAAGAACAACAATGGTCTCGACGGGCTCAGCTTC 547
Query 552 CTGG-AAACGCTAGTAACGCTA-ACGAGGTTC-AACAGAC-GTCTCAGCCCGAAACTAGC 607
|||| | | | ||| || || | |||| || || | || || ||| | ||| |||
Sbjct 548 CTGGTGATC-CAAGTTAC-ATAGATGAGG-TCGAAAAAACGGT-TCAATCTGAAGCTATT 603
Query 608 AGCGATGCTAATGGTCAAGACTGGAAGGCAACGTTAAGGCTCCCACCTCCTGATACTCGT 667
|||||| ||||| | |||||||||| ||||| |||| ||| ||||| | |||| ||||
Sbjct 604 AGCGATTCTAATAATGAAGACTGGAAAGCAACCTTAAAGCTGCCACCACGAGATAATCGT 663
Query 668 TATCAGACAGCGGATGTGACAGCTACGAAAGGAAATGAATTCGAAGATTACTTTCTGAAA 727
|| ||||||| ||||||||| || || |||||||||||||| |||||||||||| ||||
Sbjct 664 TACCAGACAGAGGATGTGACTGCCACTAAAGGAAATGAATTTGAAGATTACTTTTTGAAG 723
Query 728 AGAGATCTG-TTAAAGGGAATATATGAGAAGGGTTTTGAGAAGCCATCTCCAATTCAAGA 786
|| |||||| || | |||||||||||||||||||||||| || |||||||| ||||| ||
Sbjct 724 AGGGATCTGCTT-AGGGGAATATATGAGAAGGGTTTTGAAAAACCATCTCCTATTCAGGA 782
Query 787 AGAGAGCATTCCAATCGCTTTAACTGGTAGTGATATTCTTGCTAGAGCCAAAAACGGTAC 846
||| |||||||| || ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 783 AGAAAGCATTCCCATTGCTTTGACTGGTAGTGATATTCTTGCTAGAGCCAAAAATGGTAC 842
Query 847 AGGAAAGACTGGTGCCTTCTGCATTCC-AGTCCTCGAGAAAATTGATCCATCTAACAACG 905
|| ||||||||||||||||||||||| | ||| ||||||||||||||| ||||| |
Sbjct 843 TGGGAAGACTGGTGCCTTCTGCATTCCTA-CCCTTGAGAAAATTGATCCAGAGAACAATG 901
Query 906 TTATTCAAGCCATGATTCTAGTTCCAACGCGAGAGCTGGCCCTTCAGACATCACAAGTTT 965
| ||||||||| | |||||||||||||| |||||||| |||||||||||||| || ||||
Sbjct 902 TCATTCAAGCCGTAATTCTAGTTCCAACCCGAGAGCTCGCCCTTCAGACATCCCAGGTTT 961
Query 966 GCAAGGAGCTTTCCAAATATCTGAATATCCAGGTTATGGTCACTACTGGCGGTACCAGTC 1025
|||||||||||||||||||| |||| || ||||||||||||| ||||||||||||||||
Sbjct 962 GCAAGGAGCTTTCCAAATATTTGAAAATTGAGGTTATGGTCACCACTGGCGGTACCAGTC 1021
Query 1026 TGAGAGATGATATTATGCGATTACATCAGCCTGTGCATCTACTGGTTGGAACTCCTGGAA 1085
|||| |||||||| |||||||| |||| ||||| ||| |||||||||||||||||||||
Sbjct 1022 TGAGGGATGATATCATGCGATTGTATCAACCTGTCCATTTACTGGTTGGAACTCCTGGAA 1081
Query 1086 GAATATTGGATCTTACAAAAAAGGGTGTCTGTGTTTTGAAAGACTGTGCGATGCTTGTAA 1145
||||||| |||||| | ||||||||||| |||||||||||||| ||||| ||||||||||
Sbjct 1082 GAATATTAGATCTTGCCAAAAAGGGTGTGTGTGTTTTGAAAGATTGTGCCATGCTTGTAA 1141
Query 1146 TGGATGAGGCCGACAAGCTTTTATCTGCGGAATTCCAACCTTCTCTTGAGGAATTGATAC 1205
|||||||||||||||||||||| |||| ||||| ||||||||| | ||||| |||||||
Sbjct 1142 TGGATGAGGCCGACAAGCTTTTGTCTGTAGAATTTCAACCTTCTATAGAGGAGTTGATAC 1201
Query 1206 AGTTTC-TGCCCCAAAATCGTCA-ATTTTTGATGTTTTCTGCTACATTCCCTGTCACTGT 1263
|| ||| |||| | | || || | ||||||||||||| |||||||| |||||||||||
Sbjct 1202 AG-TTCTTGCCAGAGAGCCGGCAGA-TTTTGATGTTTTCAGCTACATTTCCTGTCACTGT 1259
Query 1264 GAAGGCTTTTAAGGATCGACATCTCCGGAAGCCCTATGTTATCAATCTCATGGATCAACT 1323
|||| |||| |||||||| ||||| |||||| || ||||||||||||||||||| ||
Sbjct 1260 GAAGTCTTTCAAGGATCGGTATCTCAAGAAGCCTTACATTATCAATCTCATGGATCAGCT 1319
Query 1324 CACGCTTATGGGTGTCACGCAATATTATGCTTTTGTTGAAGAAAGACAGAAGGTTCACTG 1383
||| ||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1320 CACACTTATGGGTGTTACCCAATATTATGCTTTTGTTGAAGAGAGACAGAAGGTGCACTG 1379
Query 1384 CCTCAACACACTTTTCTCTAAGCTGCAAATAAATCAATCGATAATCTTTTGCAACTCTGT 1443
||| ||||| || ||||||||||| |||||||| ||||| || |||||||||||||||||
Sbjct 1380 CCTTAACACGCTATTCTCTAAGCTCCAAATAAACCAATCCATTATCTTTTGCAACTCTGT 1439
Query 1444 CAATCGCGTGGAGCTGTTGGCTAAGAAAATCACAGAACTTGGTTATTCATGCTTCTACAT 1503
||||| || ||||||||||| |||||||| |||||||||||||| ||||||||||| ||
Sbjct 1440 TAATCGTGTTGAGCTGTTGGCCAAGAAAATTACAGAACTTGGTTACTCATGCTTCTATAT 1499
Query 1504 TCATGCGAAGATGGTTCAAGACCATAGGAACAGAGTATTCCACGAGTTCCGCAATGGTGC 1563
||||| |||||||||||||||||| ||||||| || ||||| || ||||||||||||||
Sbjct 1500 CCATGCAAAGATGGTTCAAGACCATCGGAACAGGGTTTTCCATGATTTCCGCAATGGTGC 1559
Query 1564 CTGCAGGAATCTCGTTTGCACTGATCTGTTTACTCGAGGAATTGACATTCAAGCTGTGAA 1623
||||| ||||| |||||||||||| ||||||| || || ||||||||||||||||||||
Sbjct 1560 ATGCAGAAATCTTGTTTGCACTGATTTGTTTACACGTGGGATTGACATTCAAGCTGTGAA 1619
Query 1624 TGTAGTGATCAACTTCGATTTTCCAAGGACTTCTGAGTCATATCTACACAGGGTGGGCCG 1683
||| ||||| || ||||||||||| |||||||||||||| |||||||| ||||| ||| |
Sbjct 1620 TGTGGTGATAAATTTCGATTTTCCTAGGACTTCTGAGTCGTATCTACATAGGGTAGGCAG 1679
Query 1684 ATCAGGACGGTTTGGACACCTTGGGTTGGCTGTGAATTTGGTAACTTACGAGGACCGTTT 1743
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1680 ATCAGGACGATTTGGACACCTTGGGTTGGCTGTGAATTTGGTAACTTATGAGGACCGCTT 1739
Query 1744 CAAAATGTATCAGACTGAACAAGAACTTGGGACTGAAATCAAACCAATTCCTTCTAAT-A 1802
||||||||||||||| || ||||||||||| ||||||||||| || || ||||| | | |
Sbjct 1740 CAAAATGTATCAGACAGAGCAAGAACTTGGAACTGAAATCAAGCCCATACCTTC-ACTTA 1798
Query 1803 TCGATCAAG-CTATCTACTGTCAGTAAACTT 1832
|||| |||| | ||||||||||||||| |||
Sbjct 1799 TCGA-CAAGGCAATCTACTGTCAGTAA-CTT 1827
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114808646415
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5