BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486604 Length=1538 Score E Sequences producing significant alignments: (Bits) Value AT3G61270.1 | Symbols: | Arabidopsis thaliana protein of unkno... 2381 0.0 AT2G45830.1 | Symbols: DTA2 | downstream target of AGL15 2 | ch... 1083 0.0 > AT3G61270.1 | Symbols: | Arabidopsis thaliana protein of unknown function (DUF821) | chr3:22678151-22680379 FORWARD LENGTH=1783 Length=1783 Score = 2381 bits (1289), Expect = 0.0 Identities = 1461/1545 (95%), Gaps = 8/1545 (1%) Strand=Plus/Plus Query 1 ATGAAGATGAATATCAAAGCCGACCAAC---ATAAACCGGTGACGTTTCCTCGAAAAAGC 57 ||||||||||||| ||| | || ||||| ||||| ||||||| ||||||||||||||| Sbjct 120 ATGAAGATGAATAACAACGACGGCCAACATAATAAAACGGTGACATTTCCTCGAAAAAGC 179 Query 58 ATCGTGAAGGCTACTGTTTTCATCGTCGTTCTATTCATTTCAGCTGCTCTCTTAGACTTT 117 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 180 ATCGTGAAGGCTACTGTTTTCATCGTCGTTCTATTCATTTCAGCTGCTATCTTAGACTTA 239 Query 118 CTTGGCTATCTCGATTTCAATGCTTTTGCAGGTTTAAAGCGAATAACGAAGAGAAAAGAA 177 || ||||||||||||||||||||||||||||||||||||| || ||| |||| ||||||| Sbjct 240 CTGGGCTATCTCGATTTCAATGCTTTTGCAGGTTTAAAGCTAACAACAAAGACAAAAGAA 299 Query 178 CCAAATCCTTACGGATGCGACTTCGTACAAAACCAATCAAACCAAACTCATTTCTCACAA 237 ||||||||||||||||||||||||||||| |||||||||| ||||||| | |||||||| Sbjct 300 CCAAATCCTTACGGATGCGACTTCGTACAGAACCAATCAAGTCAAACTCCTATCTCACAA 359 Query 238 AACCGTGCCTCGAGATTAAATCCTATC--C-GTTCAAAATCATCCACGTGTCCTTCTTAT 294 ||||| ||||||||||| || | | | ||||||||||||||||||||||||||||| Sbjct 360 AACCGCAAATCGAGATTAAACCCCAACAACAGTTCAAAATCATCCACGTGTCCTTCTTAT 419 Query 295 TTCCGTTGGATCCATGAAGATCTACGGCCGTGGAAACAAACGGGGATAACTAGAGGGATG 354 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 420 TTCCGTTGGATCCATGAAGATCTACGGCCATGGAAACAAACGGGGATAACTAGAGGGATG 479 Query 355 ATCGAAGAAGCGAGTAGAACGGCGCATTTTAGATTGGTGATCCGTAACGGGAAGGCGTAC 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 ATCGAAGAAGCGAGTAGAACGGCGCATTTTAGATTGGTGATCCGTAACGGGAAGGCGTAC 539 Query 415 GTTAAGAGATATAGGAAGTCAATTCAAACAAGAGATGATTTTACTCTGTGGGGAATCGTA 474 ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| || Sbjct 540 GTTAAGAGATATAAGAAGTCAATACAAACAAGAGATGAATTTACTCTGTGGGGAATCTTA 599 Query 475 CAGTTGTTACGGTGGTACCCTGGTAAATTACCTGATCTGGAGCTTATGTTCGACGCTGAT 534 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 600 CAGTTGTTACGGTGGTACCCTGGTAAATTACCTGATCTCGAGCTAATGTTCGACGCTGAT 659 Query 535 GACCGTCCCGTCGTCCGATCAGCTGACTTTATTGGTCAACAGAAGAAACCACCTCCAGTT 594 || ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct 660 GATCGTCCCGTCGTCCGATCAGTTGACTTTATTGGTCAACAGAAGGAACCACCTCCAGTT 719 Query 595 TTCCGTTACTGTTCAGATGACGCCAGCTTGGACATTGTCTTCCCTGATTGGTCCTTTTGG 654 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 720 TTCCGTTACTGTTCAGATGACGCAAGCTTGGACATTGTCTTCCCTGATTGGTCCTTTTGG 779 Query 655 GGCTGGGCTGAAGTGAACATAAAGCCAT-GGGGAGAATCGTTGGAGGCAATAAAAGAAGG 713 |||||||||||||||||| |||| |||| ||||| ||||||||||||||||||||||||| Sbjct 780 GGCTGGGCTGAAGTGAACGTAAAACCATGGGGGA-AATCGTTGGAGGCAATAAAAGAAGG 838 Query 714 GAACAATATGACGCAATGGAAGGAACGCGTGGCGTACGCTTATTGGAGAGGTAATCCTTA 773 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 839 GAACAGTATGACGCAATGGAAGGACCGCGTGGCGTACGCTTATTGGAGAGGTAATCCTTA 898 Query 774 TGTTGATCCTGGAAGAGGAGATCTTCTCAAGTGTAATGTTTCAGAACATGAAGAGTGGAA 833 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 899 TGTTGATCCTGGAAGAGGAGATCTTCTCAAGTGTAATGCTACAGAACATGAAGAGTGGAA 958 Query 834 TACTCGTCTCTATATTCAGGATTGGGATAAAGAATCAAAAGAAGGATACAAGAACTCAAA 893 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 959 TACTCGTCTCTATATTCAGGATTGGGATAAAGAAACAAAAGAAGGATTCAAGAACTCAAA 1018 Query 894 TCTAGAGAACCAGTGCACCCATAGATACAAGATATATATAGAAGGATGGGCATGGTCGGT 953 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1019 TCTAGAGAACCAGTGCACTCATAGATACAAGATATATATAGAAGGATGGGCATGGTCGGT 1078 Query 954 TAGTGAGAAATACATAATGGCATGCGACTCAATGACATTATATGTTAAACCAAGATTCTA 1013 ||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 1079 TAGCGAGAAATACATAATGGCATGTGACTCAATGACATTATATGTAAAACCAAGATTCTA 1138 Query 1014 CGATTTCTACATACGAGGAATGATGCCATTACAACATTATTGGCCAATCAGAGACGATTC 1073 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1139 CGATTTCTACATACGAGGAATGATGCCATTACAACATTATTGGCCAATCAGAGACGATTC 1198 Query 1074 CAAGTGTACTTCTCTCAAATTCGCCGTACATTGGGGAAATACACACGTGGACAAGGCTCG 1133 |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 1199 CAAGTGTACTTCTCTCAAATTCGCCGTACATTGGGGCAATACACACGAGGACAAGGCTCG 1258 Query 1134 TGAGATAGGAGAGCTAGGGAGTAGATTTATAAGAGAGGAAGTGAATATGAAGTATGTGTA 1193 ||||||||||||| |||| |||||||||||||||||||| ||||||||| |||||||||| Sbjct 1259 TGAGATAGGAGAGGTAGGAAGTAGATTTATAAGAGAGGAGGTGAATATGCAGTATGTGTA 1318 Query 1194 TGACTACATGTTTCATTTACTCAAAGAGTATGCAACACTCTTGAAATTTAAGCCGGAGAT 1253 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1319 TGACTATATGTTTCATTTACTCAAAGAGTATGCAACACTCTTGAAATTTAAGCCGGAGAT 1378 Query 1254 TCCTTTGGATGCGGAGGAGATCACGCCGGATAGTATGGGATGTCCCGCGACGGAACGGTG 1313 ||| || ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 1379 TCCGTTAGATGCAGAGGAGATCACGCCGGATAGTATGGGGTGTCCCGCGACGGAAAGGTG 1438 Query 1314 GAGAGATTTCATGGCGGAGTCTATGGTTCTATCTCCAAGTGAAGAGTCTCCTTGTGAAAT 1373 ||||||||| | ||||||||| ||| || ||||||| |||||||||||||||||||| || Sbjct 1439 GAGAGATTTTAAGGCGGAGTCAATGATTATATCTCCTAGTGAAGAGTCTCCTTGTGAGAT 1498 Query 1374 GCTTCCTCCTTATGACCCTCTAGCTTTAAAAGAGGTTCTTGAGAGAAAAGCTAATTTAAC 1433 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1499 GCTTCCTCCTTATGATCCTCTAGCTTTAAAAGAGGTTCTTGAGAGAAAAGCTAATTTAAC 1558 Query 1434 ACGTCAGGTTGAGTTGTGGGAAAACAAATACTTTCAAGATCTTACCAACAAAACTTAAAT 1493 |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| Sbjct 1559 TCGTCAGGTTGAGTTGTGGGAAAACCAATACTTTCAAAATCTTACCAACAAACCTTAAAT 1618 Query 1494 TGTTCTGtttttttCTTCCTCATTGACGAGATCAACCGCAACCAA 1538 |||| |||||||| |||| || ||||||||||||||||||||||| Sbjct 1619 TGTTTTGTTTTTTCCTTCTTCGTTGACGAGATCAACCGCAACCAA 1663 > AT2G45830.1 | Symbols: DTA2 | downstream target of AGL15 2 | chr2:18866061-18868542 FORWARD LENGTH=2033 Length=2033 Score = 1083 bits (586), Expect = 0.0 Identities = 1030/1240 (83%), Gaps = 47/1240 (4%) Strand=Plus/Plus Query 267 TTCAA-AATCATCCACGTGTCCTTCTTATTTCCGTTGGATCCATGAAGATCTACGGCCGT 325 ||||| ||| |||||||||||||||||| |||||||||||||| |||||||||||||| | Sbjct 602 TTCAAGAAT-ATCCACGTGTCCTTCTTACTTCCGTTGGATCCACGAAGATCTACGGCCAT 660 Query 326 GGAAACAAAC-GGGGATAACTAGAGGGATGATCGAAG-AAGCGAGTAGAACGGCGCATTT 383 ||||| | || || | |||| ||||||||| | | || |||| || || ||||||||||| Sbjct 661 GGAAAGAGACAGGTG-TAACGAGAGGGATGCTTG-AGAAAGCCAGGAGGACGGCGCATTT 718 Query 384 TAGATTGGTGATCCGT-AACGGGAAG-GCGTACGTTAAGAGATATAGGAAGTCAATTCAA 441 ||| | || |||| | ||||| || | ||||||||||| |||||| |||||||| ||| Sbjct 719 CAGAGTAGTAATCC-TCGACGGG-AGAGTGTACGTTAAGAAATATAGAAAGTCAATCCAA 776 Query 442 ACAAGAGATGATTTTACTCTGTGGGGAATCGTACAGTTGTTACGGTGGTACCCTGGTAAA 501 |||||||| | ||||||||||||||| ||||||||||| ||||||||||||| |||| Sbjct 777 ACAAGAGACGTTTTTACTCTGTGGGGCATCGTACAGTTACTACGGTGGTACCCAGGTAGG 836 Query 502 TTACCTGATCTGGAGCTTATGTTCGACGCTGATGACCGTCCCGTCGTCCGATC-AGCTGA 560 ||||| ||||| ||||| ||||| ||| | ||||| | || ||||||||| | || Sbjct 837 TTACCGGATCTTGAGCTCATGTTTGACCCAGATGATAGACCAACCGTCCGATCTA-AAGA 895 Query 561 CTTT-ATTGGTCAAC-AGA--AGAAACCACCTCCAGTT-TTCCGTTACTGTTCAGATGAC 615 |||| | ||||||| | | | || ||||| || |||||||| || || |||||| Sbjct 896 CTTTCA-AGGTCAACAACACCCGGCCCCGCCTCC-TTTGTTCCGTTATTGCTCTGATGAC 953 Query 616 GCCAGCTTGGACATTGTCTTCCCTGATTGGTCCTTTTGGGGCTGGGCTGAAGTGAACATA 675 ||||||||||| ||||||||||||||||||||||| |||||||||||||| || || ||| Sbjct 954 GCCAGCTTGGATATTGTCTTCCCTGATTGGTCCTTCTGGGGCTGGGCTGAGGTTAATATA 1013 Query 676 AAGCCATGGGGA-GAATCGTTGGAGGCAATAAAAGAAGGGAACAATATGACGCAATGGAA 734 ||||| | |||| ||||| | | ||| ||| |||||||||| || ||||| |||||||| Sbjct 1014 AAGCC-TTGGGATAAATCGCTAGTGGCGATAGAAGAAGGGAATAAGATGACTCAATGGAA 1072 Query 735 GGAACGCGTGGCGTACGCTTATTGGAGAGGTAATCCTTATGTTGATCCTGGAAGAGGAGA 794 || ||||||||||| |||||||||||||| || ||| |||| | ||| ||| |||| Sbjct 1073 AGACCGCGTGGCGTATGCTTATTGGAGAGGAAACCCTAATGTGGCTCCAACTAGAAGAGA 1132 Query 795 TCTTCTCAAG-TGTAATGTTTCAGAACATGAAGAGTGGAATACTCGTCTCTATATTCAGG 853 ||||||| || |||||||| |||| || ||||| ||||| || |||||||| ||||||| Sbjct 1133 TCTTCTC-AGATGTAATGTCTCAGCTCAAGAAGATTGGAACACACGTCTCTACATTCAGG 1191 Query 854 ATTGGGATAAAGAATCAAAAGAAGGATACAAGAACTCAAATCTAGAGAACCAGTGCACCC 913 ||||||||| ||| |||| |||||||| ||||||||| || ||||||||||| ||||||| Sbjct 1192 ATTGGGATAGAGAGTCAAGAGAAGGATTCAAGAACTCTAACCTAGAGAACCAATGCACCC 1251 Query 914 ATAGATACAAGATATATATAGAAGGATGGGCATGGTCGGTTAGTGAGAAATACATAATGG 973 | || |||||||| ||||||||||||||||||||||| || ||||||||||| ||||||| Sbjct 1252 ACAGGTACAAGATTTATATAGAAGGATGGGCATGGTCAGTGAGTGAGAAATATATAATGG 1311 Query 974 CATGCGACTCAATGACATTATATGTTAAACCAA-GATTCTACGATTTCTACATACGAGGA 1032 |||| || ||||||||||| || || | ||| | | ||||| ||||| ||| |||||||| Sbjct 1312 CATGTGATTCAATGACATTGTACGTGAGACCTATG-TTCTATGATTTTTACGTACGAGGA 1370 Query 1033 ATGATGCCATTACAACATTATTGGCCAATCAGAGACGAT-TCCAAGTGTACTTCTCTCAA 1091 |||||||||||||||||||| ||||||||||||||| | || ||||||||||| ||||| Sbjct 1371 ATGATGCCATTACAACATTACTGGCCAATCAGAGAC-ACCTCTAAGTGTACTTCCCTCAA 1429 Query 1092 ATTCGCCGTACATTGGGGAAATACACACGTGGACAAGGCTCGTGAGATAGGAGA-GCTAG 1150 |||||||||||||||||| ||||| || ||||| |||| || |||||||||| | || Sbjct 1430 ATTCGCCGTACATTGGGGGAATACTCATTTGGACCAGGCGAGTAAGATAGGAGAAGA-AG 1488 Query 1151 GGAGTAGATTTATAAGAGAGGAAGTGAATATG-AAGTATGTGTATGACTACATGTTTCAT 1209 ||||||| ||||| |||||||||||||| ||| || |||||||||||||||||||| ||| Sbjct 1489 GGAGTAGGTTTATTAGAGAGGAAGTGAAAATGGAA-TATGTGTATGACTACATGTTCCAT 1547 Query 1210 TT-ACTCAAAGAGTATGCAACACTCTTGAAATTTAAGCCGGAGATTCCTTTGG-ATGCGG 1267 || | | || |||||||||| ||| ||||| ||||| || |||||||| | || | || Sbjct 1548 TTGA-TGAACGAGTATGCAAAACTTTTGAAGTTTAAACCAGAGATTCCGTGGGGA-GCC- 1604 Query 1268 A-GGAGATCACGCCGGATAGTATGGGATGTCCCG-CGACGGAACGGTGGAGAGATTTCAT 1325 | |||||| |||||||||| |||||| || | || |||||| |||||||||||||||||| Sbjct 1605 ACGGAGATTACGCCGGATATTATGGGCTG-CTCGGCGACGGGACGGTGGAGAGATTTCAT 1663 Query 1326 GGCGGAGTCTATGGTTCTATCTCCAAGTGAAGAGTCTCCTTGTGAAATGC-TTCCTCCTT 1384 || ||||||||||||| | | ||| |||||||||||||||||||| |||| ||| ||||| Sbjct 1664 GGAGGAGTCTATGGTTATGTTTCCTAGTGAAGAGTCTCCTTGTGAGATGCCTTC-TCCTT 1722 Query 1385 ATGACCCTC-TAGCTTTAAAAGAGGTTCTTGAGAGAAAAGCTAATTTAACACGTCAGGTT 1443 | |||||| | | |||||||||| |||||||||||||| ||||||| || ||||| ||| Sbjct 1723 TTAACCCTCAT-GATTTAAAAGAGATTCTTGAGAGAAAAACTAATTTGACTCGTCAAGTT 1781 Query 1444 GAGTTGTGGGAAAA-CAAATACTTTCAAGATCTTA-CCAA 1481 |||| ||||||| | ||| || ||||| ||| ||| |||| Sbjct 1782 GAGTGGTGGGAAGATCAA-TATTTTCATGAT-TTAGCCAA 1819 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75903224040 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5