BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486605
Length=3038
Score E
Sequences producing significant alignments: (Bits) Value
AT3G61300.1 | Symbols: | C2 calcium/lipid-binding plant phosph... 4759 0.0
> AT3G61300.1 | Symbols: | C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein | chr3:22687570-22690619
FORWARD LENGTH=3050
Length=3050
Score = 4759 bits (2577), Expect = 0.0
Identities = 2894/3048 (95%), Gaps = 17/3048 (1%)
Strand=Plus/Plus
Query 2 AGACAAGTCTCCACGATCTCATAAGTGCCGAAGAAACTTTCAAAAACCTCTGCTCTGTTT 61
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 9 AGACAAGTCTCCACGATCTCATAAGTGTAGAAGAAACTTTCAAAAACCTCTGCTCTGTTT 68
Query 62 TC--CACAGA------AAGTAAAAATGATGAGTAATCTGAAACTTGGCGTTGAAGTCATA 113
|| || | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 69 TCTTCAGAAATTTTTTAAGTAAAAATGATGAGTAATCTGAAACTTGGCGTTGAAGTCATA 128
Query 114 AGCGCAAGACTCAAACCTAGAGAGGACTATGGCCGTGTTAACGCTTTCGTCGAGCTACGA 173
|||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 129 AGCGCAAGGCTCAAACCTAGAGAGGACTATGGCGGTGTTAACGCTTACGTCGAGCTACGA 188
Query 174 TTTGAGGATCAGAAAGTCATAACTACGACTAAGATCGATGACTCAAGTCCGGTGTGGAAC 233
||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct 189 TTTGACGATCAGAAAGTCATAACTATGACTAAGATCGATGACTCTAGTCCGGTGTGGAAC 248
Query 234 GAGAAGTTCTTCTTCAACATCTCTGATACAGAGGATTTATCAAATCAGTTTCTTGAGGCT 293
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 249 GAGAAGTTCTTCTTCAACATCTCTGATACAGAGGATTTATCAAATCAATTTCTTGACGCT 308
Query 294 TACGTTTACAATAAAACCAGCAGCATAACGAAATCATGTCTAGGTAAGATTCGAATTTTG 353
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||
Sbjct 309 TACGTTTACAATAAAACCAGCAGCATAACAAAATCTTGTCTAGGTAAGATTCGAATATTG 368
Query 354 GGAACTGCGTTTCTGCCGTATTCAGAAGCTGTTGGATTGCCTTACCCTCTTGAGAAAGAG 413
|||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct 369 GGAACTGCGTTTCTCCCGTACTCAGAAGCTGTTGGATTGCCTTATCCTCTAGAGAAAGAG 428
Query 414 AAATGGAGTATGTTCTCTTCCGCTGCCGCCATTGGAGGCGAGCTCGCTCTAAAAGTGTTC 473
|||||||| |||||||||||||||||||||| |||||| ||||||||||| ||||| |||
Sbjct 429 AAATGGAGCATGTTCTCTTCCGCTGCCGCCAATGGAGGTGAGCTCGCTCTCAAAGTTTTC 488
Query 474 CTCACTGATAACCCCTATCCCAAGGTACCGAATCTAACCCT-TACAAAGAAGATTCCTTC 532
|||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct 489 CTCACTGATAACCCCTCTCCCAAGGTACCGAATCTAA-TCTCTACAAAGAAGATTCCTTC 547
Query 533 TAAATCAAGGCACAAATTTCACAACATCCCCACAAATGAGAAAAGTAAACATAGCCCACA 592
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 548 TAAATCAAGGCACAAATTTCACAACATCCCCACAAATGAG---AGTAACCATAGCCCACG 604
Query 593 AGGGAATCAGCAACCGTCTCAACCTCAACCGCAAT-CGCTTCAACCGCAACCGCCTCAAC 651
||||||||||||| ||| |||||| ||||||| | ||| |||| ||||| || ||| ||
Sbjct 605 AGGGAATCAGCAATCGTTTCAACCGCAACCGC-CTCCGCCTCAATCGCAAACGGCTCTAC 663
Query 652 CGCCACCGATTATGGACTCTTCTCTGTTTCAAGCACCGAGGTTTAGTTCTCCGATACCTA 711
|||||||||| ||||| |||||||| | |||||||||||||||| || ||||||||||||
Sbjct 664 CGCCACCGATGATGGAGTCTTCTCTCTATCAAGCACCGAGGTTTGGTACTCCGATACCTA 723
Query 712 CAACTATGGGATTTAATCCGAATCCACCGGATTATTCTGTCAAAGAGACGAATCCGATTC 771
|||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 724 CAACTATGGGGTTTAATCCGAATCCACCGGATTATTCTATCAAAGAGACGAAACCGATTC 783
Query 772 TCGGAGGAGGCAAACGAGCAAGATCGAGTGATCATGATCTCGTCGAGCCAATGGAGTTTC 831
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 784 TCGGAGGAGGCAAACGAGCAAGATCAAGTGATCATGATCTCGTCGAGCCAATGGAGTTTC 843
Query 832 TCTTCATCAAAATCGTGAAAGCTAGAAATCTTCCATCCATGGACATAACCGGAAGTCTAG 891
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 844 TCTTCATCAAAATCGTGAAAGCTAGAAATCTTCCATCCATGGACTTAACCGGAAGTCTAG 903
Query 892 ATCCGTACATCGAAGTCAAACTCGGAAACTTTACCGGCAAAACAAAACATTTCGAGAAGA 951
|||| ||||||||||||||||||||||||| |||||||||||| |||||||| |||||||
Sbjct 904 ATCCATACATCGAAGTCAAACTCGGAAACTATACCGGCAAAACCAAACATTTTGAGAAGA 963
Query 952 ATCAAAACCCGATTTGGAACGAAGTCTTCGCTTTCTCCAAATCCAATCAACAATCAAACG 1011
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 ATCAAAACCCGGTTTGGAACGAAGTCTTCGCTTTCTCCAAATCCAATCAACAATCAAACG 1023
Query 1012 TTCTTGAAGTTATCGTGATGGACAAAGACATGGTCAAAGATGATTTCGTCGGTTTAATCC 1071
|||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1024 TTCTTGAAGTCATCGTCATGGACAAAGACATGGTCAAAGACGATTTCGTCGGTTTAATCC 1083
Query 1072 AGTTTGATCTCAATGAGATTCCGACACGTGTCGCACCAGACAGTCCTTTAGCTCCAGAAT 1131
||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1084 GGTTCGATCTCAATCAGATTCCGACACGTGTCGCACCAGACAGTCCTTTAGCTCCAGAAT 1143
Query 1132 GGTACAGAGTCAACAACGAGAAAGGAGGCGAGATTATGTTGGCTGTTTGGTTCGGTACTC 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1144 GGTACAGAGTCAACAACGAGAAAGGAGGCGAGATTATGTTGGCTGTTTGGTTCGGTACTC 1203
Query 1192 AAGCCGACGAAGCGTTCTCAGACGCGACATACTCAGACGCGTTAAACGCTGTTAACAAAT 1251
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1204 AAGCCGACGAAGCGTTCTCAGACGCGACATACTCAGACGCTTTAAACGCTGTTAACAAAT 1263
Query 1252 CGAGTTTGCGTTCCAAAGTCTATCATTCTCCTAGGCTTTGGTACCTCCGGGTTAATGTCA 1311
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1264 CGAGTTTGCGTTCTAAAGTCTATCATTCTCCAAGGCTTTGGTACCTCCGGGTTAATGTCA 1323
Query 1312 TCGAGGCACAAGACTTAGTTATTGTACCAGACCGGACTCGATTGCCAAATCCATATGTTA 1371
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1324 TCGAGGCACAAGACTTAGTTATTGTACCAGACCGGACTCGATTGCCAAATCCATATGTAA 1383
Query 1372 AAATCCGGTTGAATAACCAATTGGTTCGAACCAAACCGAGTCAGTCGCTGAATCCAAGAT 1431
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 1384 AAATCCGGTTGAATAACCAAGTGGTTCGAACCAAACCGAGTCACTCGCTGAATCCAAGAT 1443
Query 1432 GGAACGAAGAGTTCACGCTCGTCGCGGCTGAACCGTTTGAGGATCTGATAATCTCGATTG 1491
|||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1444 GGAACGAAGAGTTCACTCTCGTCGCGGCTGAACCGTTTGAAGATCTGATCATCTCGATTG 1503
Query 1492 AAGACCGAGTCGCGGCTAACCGAGAGGAAACGCTGGGAGAGGTACATATACCGATTGGTA 1551
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1504 AAGACCGAGTCGCACCTAACCGAGAGGAAACGCTGGGAGAGGTACATATACCGATTGGTA 1563
Query 1552 CAATTGATAAACGAATTGACGATAACCGGACAGTACCTAACCGTTGGTTTAGTCTTAAAA 1611
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1564 CAATTGATAAACGGATTGACGATAACCGGACAGTGCCTAACCGTTGGTTTAGTCTTAAAA 1623
Query 1612 CTGAGAACCAGAGAAGAGTCAGATTCGCGGCGACGAGGCTTCATCTAAACGTTTGTCTAG 1671
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 1624 CTGAGAACCAGAGAAGAGTCAGATTCGCGACGACGAGACTTCATCTAAACGTTTGTCTAG 1683
Query 1672 AAGGAGGTTATCACGTTCTTGATGAATCTACCTATTATAGCAGCGATTTAAGACCGTCGA 1731
||||||| || |||||||||||||||||||| || || ||||||||||| ||||||||||
Sbjct 1684 AAGGAGGCTACCACGTTCTTGATGAATCTACTTACTACAGCAGCGATTTCAGACCGTCGA 1743
Query 1732 TGAAAGAGTTGTTGAGTCATAAGCAGCCGTCTATTGGTGTTCTTGAATTAGGAATCTTGA 1791
|||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||
Sbjct 1744 TGAAAGAGTTGTTGAGTCATAAACAACCGTCTTTTGGTGTTCTTGAATTAGGAATCTTGA 1803
Query 1792 GAATGGAAGGTTTGAGTTTGAGCCAAGAAGGTAAGAAAGAGACGGTGGATGCTTACTGTG 1851
|||| |||||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||
Sbjct 1804 GAATTGAAGGTTTGAATTTGAGCCAAGAAGGGAAGAAGGAGACGGTGGATGCTTATTGTG 1863
Query 1852 TGGCTAAGTATGGAACCAAATGGGTCAGGACTCGGACCGTTACGGAGTGTTTAAACCCGC 1911
| |||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||
Sbjct 1864 TAGCTAAGTATGGAACCAAATGGGTCAGGACTCGAACCGTTACGAACTGTTTAAACCCGC 1923
Query 1912 GGTTCAACGAGCAGTACACATGGGAGGTTTATGAGCCAGCAACCGTAATCACAATTGGTG 1971
||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct 1924 GGTTCAATGAGCAGTACACATGGGAGGTTTATGAGCCAGCAACTGTAATAACAATCGGTG 1983
Query 1972 TTTTCGATAACAATCAGATCAATGGTGGTAACGGTAACAAAGGAGATGGGAAAATTGGGA 2031
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 1984 TTTTCGATAACAATCAGATCAATAGTGGTAATGGTAACAAAGGAGATGGGAAAATTGGGA 2043
Query 2032 AAATCAGAGTTAGAATCTCGACTCTCGAAGCCGGAAGGATCTACACTAACTCGTATCCGC 2091
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 2044 AAATCAGAGTTAGAATCTCGACTCTCGAAGCCGGAAGGATCTACAGTCACTCGTATCCGC 2103
Query 2092 TTCTTGTTCTTCGACCTTCAGGTTTAAAGAAAATGGGGGAATTGCATTTGGCGATTCGGT 2151
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||
Sbjct 2104 TTCTTGTTCTTCGACCTTCAGGTTTAAAGAAAATGGGGGAGTTGCATTTAGCGATTAGGT 2163
Query 2152 TTTCTTGCTCGTCGATGTTTCAGATGCTAATGCAGTACTGGAAACCTCTTCTTCCCAAAA 2211
|||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 2164 TTTCCTGCTCATCGATGTTTCAGATGCTAATGCAGTACTGGAAACCGCTTCTTCCCAAGA 2223
Query 2212 TGCATTACGCGAGACCGTTGAAAGTCGTGCATCAGGAGATTCTTAGGCAGCATGCGGTTA 2271
|||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 2224 TGCATTACGCAAGACCGTTGAAAGTAGTGCAGCAGGAGATTCTTAGGCAGCATGCGGTTA 2283
Query 2272 ACTTAGTGGCAGCTCGGTTAAGTAGAGCCGAGCCGCCACTTAGAAAAGAAGTAGTTGAAT 2331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2284 ACTTAGTGGCAGCTCGGTTAAGTAGAGCCGAGCCGCCACTTAGAAAAGAAGTAGTTGAAT 2343
Query 2332 ACATTTCGGATTCAAATTCGCATTTATGGAGCATGAGGAAGAGCCGTGCGAATCTCTTCA 2391
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2344 ACATTTCGGATTCAAATTCGCATTTATGGAGCATGAGGAAGAGCCGTGCAAATCTCTTCA 2403
Query 2392 GATTAAGTTCAGTTTTCTCTGGTTTACTCGGAACCGGAGAATGGTTTCAAGACATCTGCA 2451
|||| ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 2404 GATTGAGTTCTGTTTTCTCTGGTTTACTAGGAACCGGAGAATGGTTTCAAGATATCTGCA 2463
Query 2452 GGTGGAAGAAACCGGTAGCAAGTACAGCTATTCATGTAATCTACCTTG-TGTTAGTGTGT 2510
|||||||||||||||||| || ||||||||||||| |||||| | ||| |||||||||||
Sbjct 2464 GGTGGAAGAAACCGGTAGAAACTACAGCTATTCATATAATCTTC-TTGGTGTTAGTGTGT 2522
Query 2511 TCGCCGGAGATGATTCTTCCGGTGATGTCGCTTTGCTTGTTCATGCTTGGGGTATGGAAC 2570
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 2523 TCGCCGGAGATGATTCTTCCAGTGATGTCTCTTTGCTTGTTCATGCTTGGGGTATGGAAC 2582
Query 2571 TATAGGCTCCGTCCAAGACAACCTCCACACATGGACACAAGACTTTCATTTGCAGACAAT 2630
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2583 TACAGGCTCCGTCCAAGACAACCTCCACACATGGACACAAGACTATCATTTGCAGACAAT 2642
Query 2631 ATCCACCCGGAAGAGCTTAACGAAGAGTTTGATACCTTCCCTTTTTCGTCTCAAGACCCG 2690
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2643 ATCCACCCGGAAGAGCTTAACGAAGAGTTCGATACCTTCCCTTTTTCGTCTCAAGACCCG 2702
Query 2691 GGGATTGTAAAAATGCGGTACGAGCGGTTGAGGAGTATCGCAAGTAGAGCTCAAACTGTT 2750
||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||
Sbjct 2703 GGGATTGTAAAAATGCGGTACGAGCGGTTAAGGAGTATCGCTAGTAGAGCTCAAACGGTT 2762
Query 2751 GTGGGAGATATAGCAGGTCAAGGAGAAAGAGTTCAGGCTTTATTAAGCTGGAGAGATCCA 2810
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct 2763 GTGGGAGATATAGCAGGTCAAGGAGAACGAGTTCAGGCTCTGTTAAGCTGGAGAGATCCA 2822
Query 2811 AGAGCAACTTCAATCTTCATGGTGCTTTGTTTGGTTTCTACTGTCATTTTGTATGTTGTG 2870
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2823 AGAGCAACTTCGATCTTCATGGTGCTTTGTTTGGTTTCTACTGTCGTTTTGTATGTTGTG 2882
Query 2871 CCGTTTAAGGTTTTTGTTCTTCTAGCCGGACTATACATCATGAGACATCCAAGATTCAGG 2930
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 2883 CCGTTTAAGGTTTTTGTTCTTCTCGCCGGACTATACATCATGAGACCTCCAAGATTCAGG 2942
Query 2931 GGAAAGACACCTCCTGGACTTATTAATTTCTTCCGACGACTTCCTGCTAAAACAGATTGT 2990
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2943 GGTAAGACACCTCCTGGACCTATTAATTTCTTCCGACGACTTCCTGCTAAAACAGATTGT 3002
Query 2991 ATGCTGTAGAATGCTAAAACGTATAAGAAACAAGCAAAtttttttCCC 3038
||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3003 ATGCTGTAGAATGCTAAAACGTATAAGAAACAAGCAATTTTTTTTCCC 3050
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 151052665373
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5