BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486638 Length=1221 Score E Sequences producing significant alignments: (Bits) Value AT3G61530.1 | Symbols: PANB2 | Phosphoenolpyruvate carboxylase ... 1925 0.0 AT2G46110.1 | Symbols: PANB1, KPHMT1 | ketopantoate hydroxymeth... 885 0.0 > AT3G61530.1 | Symbols: PANB2 | Phosphoenolpyruvate carboxylase family protein | chr3:22771442-22773356 REVERSE LENGTH=1358 Length=1358 Score = 1925 bits (1042), Expect = 0.0 Identities = 1167/1225 (95%), Gaps = 18/1225 (1%) Strand=Plus/Plus Query 1 AATTCCAAAATCGCTTTCATCAGCAACAACAATGGCTGCTTCGCTCGTCAGGA---GTTG 57 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 13 AATTCCAAAATCGCTTTCATCAGCAACAACAATGGCTGCTTCGCTCGTCAGGAGTTGTTG 72 Query 58 CTCTCGTGCTTCGAGGGCCATCACCACCGTCCGGTTTATGAGCAACGTACCGGAGAACAC 117 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 73 CTCTCGTGCTTCGAGAGCCATCACCACCGTCCGGTTTATGAGCAACGTACCGGAGGACAC 132 Query 118 GGTTTACGGAGGACCGAAATCGCAGAACCCGAATCAGAGAGTGACTTTGACGCAATTGAG 177 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 133 GGTTTACGGAGGACCGAAACCGCAGAACTCGAATCAGAGAGTGACTTTGACGCAATTGAG 192 Query 178 ACAGAAGCATCGGAAAGGTGAGCCGATTACTATGGTCACCGCCTATGATTATCCGTCTGC 237 ||||||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||| Sbjct 193 ACAGAAGCATCGGAAAGGTGAGCCGATAACTATGGTCACCGCCTACGATTACCCTTCTGC 252 Query 238 CGTTCACATCGATACAGCCGGAATTGATGTTTGTCTCGTCGGAGATTCAGCTGCAATGGT 297 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct 253 CGTTCACATCGATACAGCTGGAATCGATGTTTGTCTCGTCGGAGATTCAGCTGCCATGGT 312 Query 298 TGTTCATGGCTATGACACCACTCTTCCTATCTCCTTAGAGGAGATGCTTGTTCACTGTCG 357 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 313 TGTCCATGGCTATGACACCACTCTTCCTATCTCCTTAGAGGAGATGCTTGTTCACTGTCG 372 Query 358 CGCCGTCGCTCGTGGAGCCAAAAGACCACTTCTTGTTGGCGATTTGCCATTTGGTACTTA 417 |||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 373 CGCCGTTGCTCGCGGAGCCAAAAGACCACTTCTTGTCGGCGATTTGCCGTTTGGTACTTA 432 Query 418 TGAATCTAGCACCAATCAGGCGGTTGATACTGCAGTAAGAGTGTTGAAAGAAGGAGGAAT 477 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 433 TGAATCTAGCACCAATCAGGCGGTTGATACTGCAGTTAGGGTGTTGAAAGAAGGAGGAAT 492 Query 478 GGATGCTATTAAACTTGAAGGAGGATCACCTTCAAGGATCACTGCTGCAAAATCCATTGT 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 493 GGATGCTATTAAACTTGAAGGAGGATCACCTTCAAGGATCACTGCTGCAAAATCCATTGT 552 Query 538 GGAAGCAGGAATTGCTGTTATGGGACATGTTGGGTTGACTCCTCAAGCTATCAGTGTTCT 597 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 553 GGAAGCAGGGATTGCCGTTATGGGACATGTTGGGTTGACTCCTCAAGCTATCAGTGTTCT 612 Query 598 TGGTGGTTTTAGGCCACAGGGCAAAAACATTGCTAGTGCTGTTAAGGTTGTGGAAACTGC 657 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 613 TGGTGGTTTCAGGCCACAGGGCAAAAACATTGCTAGTGCTGTTAAGGTTGTGGAAACTGC 672 Query 658 AATGGCTTTACAAGAAGCTGGATGTTTTTCGGTTGTTTTAGAATGTGTTCCGCCTCCTGT 717 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 673 TATGGCTTTGCAAGAAGCTGGATGTTTTTCGGTTGTTTTAGAATGTGTTCCACCTCCTGT 732 Query 718 GGCTGCTGCTGCAACCTCTGCTCTTCATATTCCAACCATTGGCATAGGAGCTGGCCCTTT 777 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 733 GGCTGCTGCTGCAACCTCTGCTCTTAATATTCCAACCATTGGCATAGGAGCTGGCCCTTT 792 Query 778 CTGCAGTGGTCAGGTTTTAGTCTACCATGATCTTCTGGGAATGATGCAGCATCCACATCA 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 793 CTGCAGTGGTCAGGTTTTAGTCTACCATGATCTTCTGGGAATGATGCAGCATCCACATCA 852 Query 838 TGCTAAGGTTACTCCAAAGTTTTGCAAACAGTACGCTCAAGTAGGAGAAGTGATCAACAA 897 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 853 CGCTAAGGTTACTCCAAAGTTTTGCAAACAGTACGCTCAAGTAGGAGAAGTGATCAACAA 912 Query 898 AGCCCTCTTAGAGTATAAGGAAGAAGTATCTAAACACTTGTTTCCAGGTCTTTCTCATAG 957 ||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| || Sbjct 913 AGCCCTCTTGGAGTATAAGGAAGAAGTATCCAAACACTTGTTTCCAGGTCCTTCTCACAG 972 Query 958 CCCTTACAAGATCGCCTCAAGCGACCTGGACGGATTCTTAAGCGAGTTACAGAA-TCTGG 1016 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 973 CCCTTACAAGATCTCCTCAAGCGACCTGGACGGATTCTTAAGCGAGTTACAGAAAT-TGG 1031 Query 1017 GATTAGATAAGGCTGCTTCTGCTGCAGCAGCATCAGCTGAAAAGATGGAGCATTCAGATT 1076 |||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 1032 GATTAGATAAAGCTGCTTCTGATGCAGCAGCATCAGCTGAAAAGATGGATCATTCAGATT 1091 Query 1077 CACCATCTTCTCAGTGACAAAGCTGTACCAATTCTCTTAGCTCTTCATTTTGAGTAGGCA 1136 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 1092 CACCATCTTCTCAGTGACAAAGCTGTTGCAATTCTCGTAGCTCTTCATTTTGAGTAGG-- 1149 Query 1137 GGCAGATCTGGTTCAAGAAATAAAAATCCTTTAATAGGATAGTTTTTTGCGGGTAAAATT 1196 | || |||||||||||||||||||||||||||||| || |||||||||| | Sbjct 1150 ------T-TG----AAGAAATAAAAATCCTTTAATAGGATAGTTATTAGCGGGTAAAACT 1198 Query 1197 AGTGTAATCCATAGGAGCTATTTCA 1221 ||||||||||||||||||||||||| Sbjct 1199 AGTGTAATCCATAGGAGCTATTTCA 1223 > AT2G46110.1 | Symbols: PANB1, KPHMT1 | ketopantoate hydroxymethyltransferase 1 | chr2:18954570-18956530 REVERSE LENGTH=1400 Length=1400 Score = 885 bits (479), Expect = 0.0 Identities = 875/1067 (82%), Gaps = 24/1067 (2%) Strand=Plus/Plus Query 16 TTCATCAGCAACAACAATGGCTG-CTTCGCTCGTC-AGGAGTTGCTCTCG-TGCTTCGAG 72 |||||| | ||||||||||| | | || ||| | |||| ||||||||| | | || | Sbjct 105 TTCATCTTC-ACAACAATGGC-GTCCTCACTC-ACTAGGAATTGCTCTCGCTTC-TCAAA 160 Query 73 GGCCATCACCACCGTCCGGTTT-ATGAGCAACGTACCGGAGAACACGGTTTACGGAGGAC 131 ||||| | | |||| |||| ||||| ||| ||||||| ||||| || |||||||||| Sbjct 161 AGCCAT---CTCTGTCC-GTTTCATGAGTAACCTACCGGAAAACACCGTCTACGGAGGAC 216 Query 132 CGAAA-TCGCAGAACCCGAATCAGAGAGTGACTTTGACGCAAT-TGAGACAGAAGCATCG 189 | ||| | || ||||| || || |||||||| | |||| || | ||||| || || || Sbjct 217 C-AAAGCCACAAAACCCAAACCAAAGAGTGACGCTAACGC-ATCTCAGACAAAAACACCG 274 Query 190 GAAAGGTGAGCCGATTACTATGGTCACCGCCTATGATTATCCGTCTGCCGTTCACATCGA 249 || ||| || ||||| || | || || ||||| ||||| || || |||||||| | || Sbjct 275 GAGAGGAGAACCGATCACCGTCGTAACTGCCTACGATTACCCATCCGCCGTTCATTTAGA 334 Query 250 TACAGCCGGAATTGATGTTTGTCTCGTCGGAGATTCAGCTGCAATGGTTGTTCATGGCT- 308 ||||| || || ||||||||||| ||||| || |||||| | |||||||||||||| | Sbjct 335 CACAGCTGGTATCGATGTTTGTCTTGTCGGTGACTCAGCTTCCATGGTTGTTCATGG-TC 393 Query 309 ATGACACCACTCTTCCTATCTCCTTAGAGGAGATGCTTGTTCACTGTCGCGCCGTCGCTC 368 | ||||| || ||||||||||||||||| |||||||||||||| ||||| ||||| |||| Sbjct 394 ACGACACAACACTTCCTATCTCCTTAGACGAGATGCTTGTTCATTGTCGTGCCGTTGCTC 453 Query 369 GTGGAGCCAAAAGACCACTTCTTGTTGGCGATTTGCCATTTGGTACTTATGAATCTAGCA 428 | || || ||| |||| || || ||||| || |||||||||||||| || || || ||| Sbjct 454 GAGGCGCTAAACGACCTCTCCTAGTTGGTGACTTGCCATTTGGTACCTACGAGTCAAGCT 513 Query 429 CCAATCAGGCGGTTGATACTGCAGTAAGAGTGTTGAAAGAAGGAGGAATGGATGCTATTA 488 | | |||||||||||||||||| || || || ||||| ||||||||||||||||| |||| Sbjct 514 CTAGTCAGGCGGTTGATACTGCGGTTAGGGTTTTGAAGGAAGGAGGAATGGATGCGATTA 573 Query 489 AACTTGAAGGAGGATCACCTTCAAGGATCACTGCTGCAAAATCCATTGTGGAAGCAGGAA 548 | || |||||||||||| |||| |||||||||||||||||| | || || |||||||||| Sbjct 574 AGCTCGAAGGAGGATCAGCTTCTAGGATCACTGCTGCAAAAGCTATAGTTGAAGCAGGAA 633 Query 549 TTGCTGTTATGGGACATGTTGGGT-TGACTCCTCAAGCTATCAGTGTTCTTGGTGGTTTT 607 |||| ||||| || |||| ||||| | || ||||| || || || |||||||||||||| Sbjct 634 TTGCGGTTATTGGTCATG-TGGGTCTAACCCCTCAGGCGATTAGCGTTCTTGGTGGTTTC 692 Query 608 AGGCCACAGGGCAAAAACATTGCTAGTGCTGTTAAGGTTGTGGAAACTGCAATGGCTTTA 667 || || || |||| |||||| |||||||||||||| ||||| || ||||||||||||||| Sbjct 693 AGACCCCAAGGCAGAAACATAGCTAGTGCTGTTAAAGTTGTTGAGACTGCAATGGCTTTA 752 Query 668 CAAGAAGCTGGATGTTTTTCGGTTGTTTTAGAATGTGTTCCGCCTCCTGTGGCTGCTGCT 727 ||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||| Sbjct 753 CAAGAAGCTGGATGTTTTTCGGTTGTTTTGGAATGCGTTCCACCTCCTGTAGCTGCTGCT 812 Query 728 GCAACCTCTGCTCTTCAT-ATTCCAACCATTGGCATAGGAGCTGGCCCTTTCTGCAGTGG 786 ||||| ||||| || || || |||||||||||||| || ||||| |||||||||||||| Sbjct 813 GCAACTTCTGCCCT-CAAGATACCAACCATTGGCATTGGGGCTGGACCTTTCTGCAGTGG 871 Query 787 TCAGGTTTTAGTCTACCATGATCTTCTGGGAATGATGCAGCATCCACATCATGCTAAGGT 846 ||||| |||| |||||||||||||| || |||||||| |||||||||||||| ||||| Sbjct 872 ACAGGTGCTAGTTTACCATGATCTTCTTGGTATGATGCAACATCCACATCATGCCAAGGT 931 Query 847 TACTCCAAAGTTTTGCAAACAGTACGCTCAA-GTAGGAGAAGTGATCAACAAAGCCCTCT 905 |||||||||||||||||| ||||||||| || || ||||||||||| ||||||||||| Sbjct 932 TACTCCAAAGTTTTGCAAGCAGTACGCT-AATGTCGGAGAAGTGATTAACAAAGCCCTAA 990 Query 906 TAGAGTATAAGGAAGAAGTATCTAAACACTTGTTTCCAGGTCTTTCTCATAGCCCTTACA 965 | || || || |||||||| |||||| | |||||||||||| |||||| || ||||||| Sbjct 991 TGGAATACAAAGAAGAAGTCTCTAAAAAAGTGTTTCCAGGTCCTTCTCACAGTCCTTACA 1050 Query 966 AGATCGCCTCAAGCGACCTGGACGGATTCTTAAGCGAGTTACAGAATCTGGGATTAGATA 1025 ||||| | |||| || || || || ||||||| |||||| ||||| || || || || | Sbjct 1051 AGATCACAGCAAGTGAGCTCGATGGGTTCTTAACCGAGTTGCAGAAGCTTGGTTTTGACA 1110 Query 1026 AGGCTGCTTCTGCTGCAGCAGCATCAGCTGAAAAGATGGAGCATTCA 1072 ||||||||||||| ||||| | ||||||| || ||||||| |||| Sbjct 1111 AGGCTGCTTCTGCAGCAGCTTTAGCAGCTGAGAACATGGAGCCTTCA 1157 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59989651275 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5