BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486656
Length=2373
Score E
Sequences producing significant alignments: (Bits) Value
AT3G61680.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 3624 0.0
> AT3G61680.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:22823481-22826992 FORWARD LENGTH=2374
Length=2374
Score = 3624 bits (1962), Expect = 0.0
Identities = 2255/2392 (94%), Gaps = 37/2392 (2%)
Strand=Plus/Plus
Query 1 CGTATATATTAATCTGGCTTGCATCTACATCTGTGAAagagagagagagagaTTCATGAA 60
|||||||||||||||||| | |||||||||||||| || |||||||||||||||||||||
Sbjct 1 CGTATATATTAATCTGGC-TCCATCTACATCTGTG-AA-AGAGAGAGAGAGATTCATGAA 57
Query 61 TCTTTTTACAGAAACACGAACAAGTTTCAGAATCTGGTCTGACTCTTTGTAACCTTCCCG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 58 TCTTTTTACAGAAACACGAACAAGTTTCAGAATCTGGTCTGACTCTTTGTAACCTTCTCG 117
Query 121 TTTAAGATTCATCATACGTATTCAAATCTCCATTTCTTTGCCATTGTTGGAATCTCCGCC 180
|||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 118 TTTAAGATTCATTGTACGTATTCAAATCTACATTTCTTTGCCATTGTTGGAATCTCCGCC 177
Query 181 TCGATCGTTTGTTATTAAAAGGATCTGGTATTCGACTTTTGTTATCG-TTCAAAGCATGG 239
|||||||||| ||| | |||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct 178 TCGATCGTTTCTTA-TCAAAGGATCTGGTATTCGATTTTTGCTATCGTTTCAAAGCATGG 236
Query 240 TCTGACGATGATCATGATCTCCGGCTGATCC---AACGGTTAAACAAAGCTATTTTTGAT 296
||| | ||||||| ||||||||| ||||||| ||||||||| ||| ||| ||||||||
Sbjct 237 TCTAATGATGATCCTGATCTCCGACTGATCCAATAACGGTTAAGCAACGCTGTTTTTGAT 296
Query 297 CCTCCA---TTG--T----T--ATCAACACTCAGAAATAAGGTGGAGTTTTGTTCATAAA 345
|||||| ||| | | ||||||||||||||||||| ||||||||||||||||||
Sbjct 297 CCTCCATTGTTGTTTGCCATCGATCAACACTCAGAAATAAGTTGGAGTTTTGTTCATAAA 356
Query 346 GAATGGCGTTTAATACGGCTATGGCGTCTACATCTCCAGCGGCAGCAAATGACGTTTTAA 405
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 357 GAATGGCGTTTAATACGGCTATGGCGTCTACATCTCCAGCGGCGGCAAATGACGTTTTAA 416
Query 406 GAGAACATATTGGCCTCCGTAGATCGTTGTCCGGGCAAGATCTCGTCGTGAAAGGCGGTG 465
|||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||
Sbjct 417 GAGAACATATTGGCCTCCGTAGATCGTTGTCCGGTCAAGATCTCGTCTTAAAAGGCGGTG 476
Query 466 GTATACGAAGATCGAGTTCCGACAATCACTTGTGTTGTCGCTCTGGTAATAATAATCA-- 523
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 477 GTATACGGAGATCGAGTTCCGACAATCACTTGTGTTGTCGCTCCGGTAATAATAATAATC 536
Query 524 G-ATTCTTGCTGTGTCTGTACGTCCAGGGATGAAAACGAGTCGATCTGTGGGAATGTTCT 582
| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||
Sbjct 537 GCATTCTTGCTGTGTCTGTTCGTCCGGGGATGAAAACGAGTCGATCTGTGGGAGTGTTCT 596
Query 583 CGTTTCAGATATCGAGTTCTATAATCCCAAGTCCGATAAAAACGTTGCTATTTGAAACGG 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 CGTTTCAGATATCGAGTTCTATAATCCCAAGTCCGATAAAAACGTTGCTATTTGAAACGG 656
Query 643 ACACGTCTCAAGACGAGAAAGAGATCGATGAGATTGAGATTGAGACTGAGCCAAATCTAG 702
||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 657 ACACGTCTCAAGACGAGCAAGAGAGCGATGAGATTGAGATTGAGACAGAGCCAAATCTAG 716
Query 703 ATGGAGCCAAAAAGGCAAATTGGGTCGAGAGGTTGCTTGAGATAAGGAGACAGTGGAAGA 762
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 717 ATGGAGCCAAGAAGGCAAATTGGGTCGAGAGGCTGCTTGAGATAAGGAGACAGTGGAAGA 776
Query 763 AAGAGCAAAGAACAGAGAGTGGAAACGGTGACGTTGCAGAGGAAAGTGTTGATGTTACCT 822
|||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||| |
Sbjct 777 GAGAGCAAAAAACAGAGAGTGGAAACAGTGACGTTGCAGAGGAAAGTGTTGACGTTACGT 836
Query 823 GTGGTTGTGAAGACGAAGAAGAAGGTTGCATTGCGAATTACGGGTCTG-AGAACGGTGAT 881
||||||||| | | ||||||||||||||||||||||||||||| |||| | || ||||||
Sbjct 837 GTGGTTGTG-A-A-GAAGAAGAAGGTTGCATTGCGAATTACGGATCTGTA-AATGGTGAT 892
Query 882 TGGGGACGCGAATCGTTCTCTAGATTGCTTGTGAAGGTTTCTTGGTCTGAGGCTAAAAAG 941
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 893 TGGGGACGAGAATCGTTCTCTAGATTGCTTGTGAAGGTTTCTTGGTCTGAGGCTAAAAAG 952
Query 942 CTTTCTCAGTTAGCTTATTTGTGTAACTTGGCTTACACGATACCTGAGATCAAGGGTGAG 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 CTTTCTCAGTTAGCTTATTTGTGTAACTTGGCTTACACGATACCTGAGATCAAGGGTGAG 1012
Query 1002 GATTTGAGAAGAAACTATGGGTTAAAGTTTGTGACATCTTCATTGGAAAAGAAAGCGAAA 1061
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1013 GATTTGAGAAGAAACTATGGGTTAAAGTTTGTGACATCTTCATTGGAAAAGAAAGCTAAA 1072
Query 1062 GCAGCCATACTTAGAGAGAAACTAGAGCAAGATCCAACACGTGTTCCTGTTATTACATCT 1121
||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 1073 GCAGCGATACTTAGAGAGAAACTAGAGCAAGATCCAACACATGTCCCTGTTATTACATCC 1132
Query 1122 CCAGAATTAGAATCCGAGAAGCAGCCTCAACGATCAGCTTCATCTTCTGCTTCTGCTTAC 1181
|| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1133 CCGGATTTAGAATCCGAGAAGCAGTCTCAACGATCAGCTTCATCTTCTGCTTCTGCTTAC 1192
Query 1182 AAGATTGCTGCTTCAGCTGCGTCTTACATTCACTCTTGCAAAGAGTATGATCTTTCAGAA 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1193 AAGATTGCTGCTTCAGCTGCGTCTTACATTCACTCTTGCAAAGAGTATGATCTTTCAGAA 1252
Query 1242 TCGAGCAACCCGGTTTATAAATCAGCTGCTGCTGCTCAGGCGGCAGCGTCTACGATGACA 1301
| ||| |||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1253 -C---CAA-----TTTATAAATCAGCTGCTGCTGCTCAGGCTGCAGCGTCTACCATGACC 1303
Query 1302 GCCGTGGTTGCTGCGGGTGAGGAGGAGAAGCTAGAAGCGGCAAGGGAGTTACAGTCGCTA 1361
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1304 GCGGTGGTTGCTGCGGGTGAGGAGGAGAAGCTAGAAGCGGCAAGGGAGTTACAGTCGCTA 1363
Query 1362 CAATCATCTCCTTGTGAGTGGTTTGTTTGCGACGATCCAAACACATACACTAGGTGCTTT 1421
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1364 CAATCATCTCCTTGTGAGTGGTTTGTTTGTGATGATCCAAACACATACACTAGGTGCTTT 1423
Query 1422 GTGATTCAGGGATCTGATTCTTTAGCTTCTTGGAAAGCAAACCTCTTCTTTGAGCCAGCT 1481
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||
Sbjct 1424 GTGATTCAGGGATCTGATTCTTTAGCTTCTTGGAAAGCAAACCTTTTCTTCGAGCCAACT 1483
Query 1482 AAGTTTGAGGAAACAGATGTATTAGTCCACAGAGGAATCTACGAGGCAGCAAAAGGAATA 1541
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1484 AAGTTTGAGGACACAGATGTATTAGTCCACAGAGGAATCTACGAGGCAGCAAAAGGAATA 1543
Query 1542 TACGAACAGTTCTTACCAGAAATAACAGAGCATTTGTCTAGACACGGAGATAGAGCTAAG 1601
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1544 TACGAACAGTTCTTACCAGAAATAACAGAGCATTTGTCTAGACATGGAGATAGAGCTAAG 1603
Query 1602 TTTCAGTTTACGGGTCATTCTCTTGGAGGCAGTCTTTCATTAATAGTGAATTTGATGCTT 1661
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1604 TTTCAGTTCACGGGTCATTCTCTTGGAGGCAGTCTCTCATTAATAGTGAATTTGATGCTT 1663
Query 1662 ATCTCTAGAGGACTCGTTAGCTCTGAAGCTATGAAATCCGTTGTCACGTTCGGTTCACCG 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1664 ATCTCTAGAGGACTCGTTAGCTCTGAAGCTATGAAATCCGTTGTCACGTTCGGTTCACCG 1723
Query 1722 TTTGTGTTTTGTGGCGGTGAGAAGATTCTAGCTGAGCTTGGCCTTGACGAGAGTCATGTT 1781
|||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1724 TTTGTGTTTTGTGGTGGTGAGAAGATTCTAGCGGAGCTTGGTCTTGACGAGAGTCATGTT 1783
Query 1782 CACTGTGTGATGATGCATAGAGATATCGTCCCACGAGCCTTCTCGTGTAATTATCCTGAC 1841
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1784 CACTGTGTGATGATGCATAGAGATATCGTCCCACGAGCCTTTTCGTGTAATTATCCTGAC 1843
Query 1842 CATGTTGCTCTCGTTCTCAAGCGTTTGAATGGGTCTTTCCGTACACATCCTTGTCTCAAC 1901
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 1844 CATGTTGCTCTCGTTCTCAAGCGTTTGAATGGCTCCTTCCGTACACATCCTTGTCTCAAC 1903
Query 1902 AAAAACAAACTGTTGTATTCACCGATGGGGAAAGTTTTTATTCTACAGCCGAGTGAGAGC 1961
||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 1904 AAAAATAAACTGTTGTATTCACCGATGGGGAAAGTATATATTCTACAGCCGAGTGAGAGC 1963
Query 1962 GTCTCGCCGACGCACCCTTGGCTACCACCGGGTAACGCTCTCTACATTTTAGAAAAGAGC 2021
||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||
Sbjct 1964 GTCTCGCCGACGCACCCATGGCTTCCACCGGGAAACGCTCTGTACATTTTAGAAAATAGC 2023
Query 2022 AATGAAGGTTACTCTCCTACGGCGTTACGTGCGTTTTTGAACCGCCCTCACCCTCTCGAA 2081
|| |||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||
Sbjct 2024 AACGAAGGTTACTCTCCTACGGCGTTACGAGCATTTTTAAACCGCCCTCACCCGCTCGAA 2083
Query 2082 ACACTGAGTCAACGCGCAGCTTATGGCTCGGAAGGTTCGGTCTTGAGGGATCACGATTCC 2141
|| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||
Sbjct 2084 ACGCTGAGTCAACGCGCAGCTTATGGCTCGGAAGGTTCAGTCTTGAGGGACCACGACTCC 2143
Query 2142 AAAAACTACGTCAAAGCCGTGAACGGAGTTCTCAGGCAACACACGAAGCTCATAGTTAGG 2201
|| |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2144 AAGAACTACGTTAAGGCCGTGAACGGAGTTCTCAGGCAGCACACGAAGCTCATAGTTAGG 2203
Query 2202 AAAGCCAGGATACAGAGGAGGAGTGTTTGGCCGGTGCTGACGTCAGCAGGGCGTGGATTA 2261
|||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct 2204 AAAGCCAGGATACAAAGGAGGAGTGTTTGGCCCGTGCTGACATCAGCAGGACGTGGATTA 2263
Query 2262 AACGGGAACCTGCCGACGACCGAGGAGATCATGACACGTGTCTAATGAGGGGAAAATCTA 2321
|||| || |||| ||||| ||||||||||||||||||||||||||||| || ||||| ||
Sbjct 2264 AACGAGAGCCTGACGACGGCCGAGGAGATCATGACACGTGTCTAATGAAGG-AAAATGTA 2322
Query 2322 CGGTTGTATATAAGTGGAATCTCTTCTGATTATGCGTTTGTTTACATTTCTT 2373
||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 2323 CGGTTGTATATAAGTGGAATCACTTCTGATTATGCGTTTATTTACATTTCTT 2374
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117820679115
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5