BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486659
Length=1779
Score E
Sequences producing significant alignments: (Bits) Value
AT3G61700.2 | Symbols: | Plant protein 1589 of unknown functio... 2566 0.0
AT2G46420.1 | Symbols: | Plant protein 1589 of unknown functio... 913 0.0
> AT3G61700.2 | Symbols: | Plant protein 1589 of unknown function
| chr3:22835207-22839089 FORWARD LENGTH=1872
Length=1872
Score = 2566 bits (1389), Expect = 0.0
Identities = 1688/1820 (93%), Gaps = 70/1820 (4%)
Strand=Plus/Plus
Query 1 CAGTCTACTCTACTGTTTGGtctctctctctct-ttttttttttttAACTCTTATCTCTG 59
||||||||||| ||||||||||||||||||||| | |||||||||| |||||||||||||
Sbjct 2 CAGTCTACTCTCCTGTTTGGTCTCTCTCTCTCTCTCTTTTTTTTTT-ACTCTTATCTCTG 60
Query 60 TGCAAGCAACTTCGTCTCTCTCGATAATGGCGTTCCGATATCTTCTCGCTGTCTCCGTCT 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TGCAAGCAACTTCGTCTCTCTCGATAATGGCGTTCCGATATCTTCTCGCTGTCTCCGTCT 120
Query 120 TCGGAGATTTTGTTTG-A--CTTCAAAGGACAGTCGGATCTTTGTTAAACACTATCTTCT 176
|||||| ||||||||| | |||||||||||||||||||||||||| |||||||| | |
Sbjct 121 TCGGAGTTTTTGTTTGAATTCTTCAAAGGACAGTCGGATCTTTGTTTTACACTATC-T-T 178
Query 177 CCAGTTCAAATCTCTTATTGGATTTCATCAGAGTTCTC-TCGT-TTAATCCATCGCGTTT 234
|| | ||||| || ||||||||||||||| || || | | ||||||||||||||||
Sbjct 179 -CA--T--AATCT-TTGTTGGATTTCATCAGACTTGTCAT-TTATTAATCCATCGCGTTT 231
Query 235 CTCAGTGTTTCTAGTTGGCAAATTTCGGTGTGTATATTGGCTATTATTAAAAATTCGTCG 294
|||||||||||||||| || ||||||||| | ||||||||| |||||| |||||||||
Sbjct 232 CTCAGTGTTTCTAGTTCGCCAATTTCGGTTTTTATATTGGC---TATTAACAATTCGTCG 288
Query 295 AGATAACTTTGTGT-TCATCAAGAGTGTGTGAG------A--------T-TTCAAAGGCT 338
| |||||||||||| | || ||||||||||| | | ||||||||||
Sbjct 289 ACATAACTTTGTGTGTTTTC--GAGTGTGTGAGATTTTTAGGGTTCGTTCTTCAAAGGCT 346
Query 339 TCAAGTTCGCGGGAAGGTAAGATTCTGTTTGGTAGAAAATTTTGATACGAATTGAGCAAG 398
||| | |||||||||||| || |||||| | |||||||||||||| |||||| |||
Sbjct 347 TCAGGGTCGCGGGAAGGT----TTATGTTTGCTTGAAAATTTTGATACAAATTGACCAAT 402
Query 399 ATGTTGAACTCTATCGACTGCATTGTTGTATGTGGTGCTAAAGAGAACACTTCTGATTGA 458
|||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 403 ATGTTGAACTCTATGGACTGCATTGTTGTTTTTGGTGCTAAAGAGAACACTTCTGATTGA 462
Query 459 AGGATGCATTCACTTTACATTCAGCAGTAATGAAGAAAGGACAGTGCGCACAGGAACTAC 518
|||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 463 AGGATGTTTTCACTTTACATTCAGCAGTAATGAAGAACGGACAGTGCGCACAGGAGCTAC 522
Query 519 ATTCTTCCACTCAAGCTTCACATGACTCTCAAGGTGAACAGAAAACCAACCTATCAATAG 578
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 523 AATCTTCCACTCAAGCTTCACATGACTCTCAAGGTGACCAGAAAACCAACCTATCAATAG 582
Query 579 AGGCTCCTATACAAGATTCTGGTTCTGTATCTGCTTCAAGCAATGACAGTAGGAAAGTTT 638
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 583 ATGCTCCTATACAAGATTCTGGTTCTGTATCTGCTTCAAGCAATGACAGTAGGAAAGTTT 642
Query 639 CAAGACAAGATATTGAACTTGTTCAAAATTTGATAGAAAGATGTCTTCAGTTGTACATGA 698
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 643 CACGACAAGATATTGAACTTGTTCAAAATTTGATAGAAAGATGTCTTCAGTTGTACATGA 702
Query 699 ACAGAGATGAGGTCGTGAAGACCCTCTTGACTCGTGCAAGGATAGACCCTGGATTTACAA 758
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 703 ACAGAGATGAGGTCGTGAAGACTCTCTTGACTCGTGCAAGGATAGACCCTGGATTTACAA 762
Query 759 CCTTGGTTTGGCAGAAATTGGAAGAAGAAAACGCAGACTTTTTCAGGGCTTATTATATAA 818
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 763 CCTTGGTTTGGCAGAAATTGGAAGAAGAAAACGCAGACTTTTTCAGGGCATATTATATAA 822
Query 819 GGTTGAAACTGAAGAAGCAAATAATTTTGTTCAATCATTTGCTTGAGCACCAGTACCATC 878
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 823 GGCTGAAACTGAAGAAGCAAATAATTTTGTTCAATCATTTGCTTGAGCACCAGTACCATC 882
Query 879 TCATGAAGTATCCTCCTGGACCTCCAAAAATTCCTCTGGCACCGATACAAAACGGAATGC 938
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 883 TCATGAAGTATCCTCCTGGACCTCCAAAAGTTCCTCTGGCACCGATACAAAACGGAATGC 942
Query 939 ATCCCATGGCACCTGTTAACATGCCAATGGGATACCCAGTACTACAACATCCTCAAATGC 998
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 943 ATCCCATGGCACCTGTTAACATGCCGATGGGATACCCAGTACTACAACATCCTCAAATGC 1002
Query 999 ATGTTCCAGGCCATCCCCATC-T-T-GATGCAATGGGAGTATCGAGCTGCCATGTTGTTA 1055
||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||
Sbjct 1003 ATGTTCCAGGCCATCCCCATCATCTTGATGCAATGGGAGTATCGAGCTGCCATGTTGTTA 1062
Query 1056 ATGGAGTCCCTGCCCCTGCGAATTTCCATCCTTTGAGGATGAATACAGCGAATGATATGG 1115
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1063 ATGGAGTCCCTGCCCCTGCTAATTTCCATCCTTTGAGAATGAATACAGCGAATGATATGG 1122
Query 1116 TGATCGATACAACTGCGAATGGTGCAACTCCTCAAGTGATTCCACCAAACAGTGGGGGGA 1175
||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||
Sbjct 1123 TGATCGATACAACTGCGAACGATGCAACTCCTCAAGTGATTCCACCAAACAGTGGTGCGA 1182
Query 1176 TGCCTGAGATGGCAGCGAGCCCAGCTTCTGTGGCGTCAAGTGGACACTTTCCGTTTGCTG 1235
|||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 1183 TGCCTGAGATGGTAGCGAGTCCAGCTTCTGTGGCGTCAAGTGGACACTTTCCATTTGCTG 1242
Query 1236 CTTCAGACATGTCGGGTATGGTAATGGACACTTCAGTGCTTGATTCAGCATTCACATCTG 1295
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1243 CTTCAGACATGTCGGGTATGGTAATGGACACTTCAGTACTTGATTCGGCATTCACATCTG 1302
Query 1296 ACGTTGGACCGGATGGAGAAGGAGCCGGGAATTCCAGAGATTCCCTCAGGTCATTTGATC 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1303 ACGTTGGACCGGATGGAGAAGGAGCCGGGAATTCCAGAGATTCCCTCAGGTCATTTGATC 1362
Query 1356 AGATTCCTTGGAACTTTAGCCTTTCTGATCTCACGGCAGATTTGTCAAATCTGGGAGAT- 1414
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1363 AGATCCCTTGGAACTTTAGCCTTTCTGATCTCACCGCAGATTTGTCAAATCTGGGAGATA 1422
Query 1415 T-TA-G--G-AG---------CCTTAGGAAACTATCCAGGCTCTCCATTTCTTCCATCTG 1460
| || | | || |||||||||||||||||||||||||||||||||||||||
Sbjct 1423 TGTATGTTGCAGATTTAGGAGCCTTAGGAAACTATCCAGGCTCTCCATTTCTTCCATCTG 1482
Query 1461 ATTCAGAGATTTTCCTGGATTCTCCTGAACAAGAGGACATAGAGGAGTTTTTCGTGGATT 1520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1483 ATTCAGAGATTTTCCTGGATTCTCCTGAACAAGAGGACATAGAGGAGTTTTTCGTGGATT 1542
Query 1521 CGGTGCCTGGACCTCGTTCTAATTCAGATGAAGAGAAGCCTTGAATTGAAAAGTAGCGAC 1580
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 1543 CGGTGCCTGGACCTCGTTCTAATTCAGATGAAGAGAAGCCTTGAATTGAAAGGTAGAGAC 1602
Query 1581 GGCCATAATCATCTTTCAGATAAACCACCAAAGCATTATTAAAATAACAAATATTGATAT 1640
|||||||||||||| ||| | | ||||| |||||||||||||||||| |||||||||
Sbjct 1603 GGCCATAATCATCTA-CAG-T---C-ACCAA-GCATTATTAAAATAACAAGTATTGATAT 1655
Query 1641 ATATAAATCAAAGCATTATGAATAAAATGAAGCTGCAGTTGTAGTCTCCTTGTACCTCTA 1700
||| || ||| || |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1656 ATA-AA-TCAGAGTATTATGAATAAAATGAAGCTGCAGTTGTAGTCTCCTTGTATCTCTA 1713
Query 1701 TTACAATTCTCTTAAATGAAGCAAGAAATAGGCTTAGACTAGTTTC-TTTGTCTTTTATT 1759
||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||
Sbjct 1714 TTACAATTCTCTTAAATGAAGCAAGAAATAGGCGTAGACTAGTTTCCTTT-TCTTTTATT 1772
Query 1760 TGTTTCAATCCTATGCTTTG 1779
||||||||||||||||||||
Sbjct 1773 TGTTTCAATCCTATGCTTTG 1792
> AT2G46420.1 | Symbols: | Plant protein 1589 of unknown function
| chr2:19053686-19057096 FORWARD LENGTH=1868
Length=1868
Score = 913 bits (494), Expect = 0.0
Identities = 910/1102 (83%), Gaps = 63/1102 (6%)
Strand=Plus/Plus
Query 508 ACAGGAACTACATTCTTCCACTCAAGCTTCACATGACTCTCAAGGTGAACAGAAAACCAA 567
|||||| | || ||||| || |||| ||||||||| || ||||||||||||||| ||
Sbjct 522 ACAGGAGTTGCAGTCTTCTACCCAAGTTTCACATGAGTCCCAAGGTGAACAGAAAGTTAA 581
Query 568 CCTATCAATAGAGGCTCCTATACAAGATTCTGGTTCTGTATCTGCTTCAAGCAATGACAG 627
||||| |||| ||||| |||||||||||||||||||||||||| ||||| |||||| |
Sbjct 582 TTTATCAGTAGAAGCTCCAATACAAGATTCTGGTTCTGTATCTGCCTCAAGTAATGACGG 641
Query 628 TAGGAAAGTTTCAAGACAAGATATTGAACTTGTTCAAAATTTGATAGAAAGATGTCTTCA 687
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 642 TAGGAAAGTGTCAAGACAAGATATTGAACTTGTCCAAAATTTGATAGAAAGATGTCTCCA 701
Query 688 GTTGTACATGAACAGAGATGAGGTCGTGAAGACCCTCTTGACTCGTGCAAGGATAGACCC 747
||||||||||| ||||||||||||||| ||||| |||||||| ||||||||||| |||||
Sbjct 702 GTTGTACATGAGCAGAGATGAGGTCGTAAAGACACTCTTGACCCGTGCAAGGATTGACCC 761
Query 748 TGGATTTACAACCTTGGTTTGGCAGAAATTGGAAGAAGAAAACGCAGACTTTTTCAGGGC 807
||| |||||||| || || ||||| ||| ||||||||||||||||||| |||||||||||
Sbjct 762 TGGTTTTACAACATTAGTATGGCAAAAACTGGAAGAAGAAAACGCAGAGTTTTTCAGGGC 821
Query 808 TTATTATATAAGGTTGAAACTGAAGAAGCAAATAATTTTGTTCAATCATTTGCTTGAGCA 867
||||| || || |||||||||||||||||||| || | ||||||||||||||||||||
Sbjct 822 ATATTACATCAGACTGAAACTGAAGAAGCAAATAGTTGTATTCAATCATTTGCTTGAGCA 881
Query 868 CCAGTACCATCTCATGAAGTATCCTCCTGGACCTCCAAAAATTCCTCTGG-CACCGATAC 926
||||| || |||| ||||||| | | || | ||||| ||||||||| | || || |
Sbjct 882 TCAGTATCACCTCACGAAGTATAATG-T--ACATTCAAAAGTTCCTCTGGTC-CCAATGC 937
Query 927 AAAACGGAATGCATCCCATGGCACCTGTTAACA---TGCCAATGGGATACCCAGTACTAC 983
| ||||| || ||||| |||||| |||| |||| |||| |||||||||||||||||||
Sbjct 938 AGAACGGTATTCATCCTATGGCATCTGTGAACAACATGCCCATGGGATACCCAGTACTAC 997
Query 984 AACATCCTCAAATGCATGTTCCAGGCCATCCCCATCTTGATGC-A--A--TG-GGAGTAT 1037
|||||||||| ||||||| || ||| ||||||||||||||| | | | || ||| | |
Sbjct 998 AACATCCTCAGATGCATGCTCAAGGTCATCCCCATCTTGATCCTATGAGCTGTGGAATGT 1057
Query 1038 CGAGCTGCCATGTTGTTAATGGAGTCCCTGCCCCTGCGAATTTCCATCCTTTGAGGATGA 1097
| ||||||||||| ||||||||||||||||| ||||| |||||||| || ||||||| |
Sbjct 1058 CAAGCTGCCATGTGGTTAATGGAGTCCCTGCACCTGCTAATTTCCAACCAATGAGGATCA 1117
Query 1098 A-TACAGCGAATGATATGGTGATCGATACAACTGCGAATGG-TG--C-AACTCCTCAAGT 1152
| | ||| |||||||||||| || |||||||| | | ||| || | |||||| || |
Sbjct 1118 ACT-CAGGGAATGATATGGTAATAGATACAAC--C-A-TGGCTGAACCAACTCC--AA-T 1169
Query 1153 GATTCCACCAAACAGTGGGGGGATGCCTGAGATGGCAGCGAGCCCAGCTTCTGTGGCGTC 1212
|||||||||||| ||||| ||| | || ||| ||| || |||||||||||||||||
Sbjct 1170 GATTCCACCAAATAGTGGT---ATGTCGGATATGCCAGTAAGTCCAGCTTCTGTGGCGTC 1226
Query 1213 AAGTGGACACTTTCCGTTTGCTGCTTCAGACATGTC-GGGTATGGTAATGGACACTTCAG 1271
||| ||||||||||| |||||||||||||||||||| ||| |||| ||||||||| ||||
Sbjct 1227 AAGCGGACACTTTCCATTTGCTGCTTCAGACATGTCAGGG-ATGGGAATGGACACGTCAG 1285
Query 1272 -TGCTTGATTCAGCATTCACATCTGACGTTGGA-C--C-G--G----A----T-GGA--- 1312
| ||||| || || ||||||||||| || ||| | | | | | | |||
Sbjct 1286 CT-CTTGACTCTGCTTTCACATCTGATGTCGGAACTTCAGTAGGGTTACAACTTGGATCA 1344
Query 1313 GA---AGGAGCCGGGAATTCCAGAGATTCC-CTCAGGTCATTTGATCAGATTCCTTGGAA 1368
|| |||||| || ||||| ||||| || |||||| ||||||||||||| ||||||||
Sbjct 1345 GATGGAGGAGCTGGAAATTCTAGAGAC-CCTCTCAGGCCATTTGATCAGATACCTTGGAA 1403
Query 1369 CTTTAGCCTTTCTGATCTCACGGCAGATTTGTCAAATCTGGGAGATTTAGGAGCCTTAGG 1428
|||||| || ||||| ||||| ||||||||||||||||| ||||||||||| || |||||
Sbjct 1404 CTTTAGTCTCTCTGACCTCACTGCAGATTTGTCAAATCTTGGAGATTTAGGGGCTTTAGG 1463
Query 1429 AAACTATCCAGGCTCTCCATTTCTTCCATCTGATTCAGAGATTTTCCTGGATTCTCCTGA 1488
||||||||| || ||||| ||||| |||||||||||||||||||| || || ||||| ||
Sbjct 1464 AAACTATCCCGGTTCTCCTTTTCTGCCATCTGATTCAGAGATTTTACTTGACTCTCCCGA 1523
Query 1489 ACAAGAGGACATAGAGGAGTT-TTTCGTGGATTCGGTGCCTGGACCTC---GTTCTAATT 1544
||||||||||||||| || || ||| ||||||||| | || ||||||| ||||| | |
Sbjct 1524 ACAAGAGGACATAGATGAATTCTTT-GTGGATTCGATTCCAGGACCTCCATGTTCTCAGT 1582
Query 1545 CAGATGAAGAGAAGCCTTGAAT 1566
|||| ||||| ||| ||| |||
Sbjct 1583 CAGAAGAAGACAAGTCTT-AAT 1603
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88001555385
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5