BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486710 Length=781 Score E Sequences producing significant alignments: (Bits) Value AT3G62020.1 | Symbols: GLP10 | germin-like protein 10 | chr3:22... 1190 0.0 > AT3G62020.1 | Symbols: GLP10 | germin-like protein 10 | chr3:22971358-22972268 REVERSE LENGTH=824 Length=824 Score = 1190 bits (644), Expect = 0.0 Identities = 744/791 (94%), Gaps = 11/791 (1%) Strand=Plus/Plus Query 1 ATATCACACAGTTTCAAATTAGAGCTTCGAATCTAGTTTACTTGCTCTTCTACAGTACAT 60 |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| Sbjct 1 ATATCACACAGTTTCAAATTAGAGCTTCAAATCTAG-TTACTTGTTCTTCTACAGTACAT 59 Query 61 GATCAAAA-T------CATGGACTCGAGATGTTATGGCTTCTTCTTTGCTCTGTTCTCTT 113 ||||||| | ||||||||||||||||| ||||||||||||| || |||| ||| Sbjct 60 CATCAAAAGTCAAAACCATGGACTCGAGATGTTTTGGCTTCTTCTTTACTTTGTTATCTC 119 Query 114 TAACTGTGGTTGCTCTTGCTTACGATCCTGACACGCTTCAAGATCTCTGCGTTGCAGATC 173 ||| |||| ||| ||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 120 TAAATGTGATTGTTCTTGCTTACGATCCTGACACACTTCAAGATCTCTGCGTTGCGGATC 179 Query 174 GCTCTTCAGGGATCAAAGTGAATGGTTTCACATGTAAGCCGGAATCAAACATCACCGCCT 233 || |||||||||| ||||||||||||||||||||||| || ||||||||||||||||| | Sbjct 180 GCACTTCAGGGATAAAAGTGAATGGTTTCACATGTAAACCCGAATCAAACATCACCGCTT 239 Query 234 CAGATTTTTTCTTCGCCGGAATCGGAAAACCCGCCGTCGTTAACAACACAGTCGGGTCAG 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 CAGATTTTTTCTTCGCCGGAATCGGAAAACCCGCCGTCGTTAACAACACAGTCGGGTCAG 299 Query 294 CCGTCACGGGAGCAAACGTAGAGAAGATCGCAGGGCTTAACACGCTCGGAGTCTCACTCG 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 CCGTCACGGGAGCAAACGTAGAGAAGATCGCAGGGCTTAACACGCTCGGAGTCTCACTCG 359 Query 354 CGCGTATCGACTACGCTCCCGGAGGTTTAAACCCGCCGCACACGCATCCACGCGCCACTG 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 360 CGCGTATCGACTACGCTCCCGGAGGTTTAAACCCGCCGCACACGCATCCACGCGCCACCG 419 Query 414 AAGTGATCTTCGTTTTGGAAGGCGAGCTTGACGTCGGATTCATAACGACGGCGAACAAGC 473 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 420 AAGTGATCTTCGTTTTGGAAGGCGAGCTTGACGTTGGATTCATAACGACGGCGAACAAGC 479 Query 474 TATTCGCTAAGACGGTGAAGAAAGGAGAAGTTTTCGTCTTCCCGAGAGGATTGATTCATT 533 | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 480 TCTTCGCTAAGACGGTGAAGAAAGGAGAAGTGTTCGTCTTCCCTAGAGGATTGATTCATT 539 Query 534 ACCAGAAGAACAACGACAAAGCGAAACCTGCGTCGGTGATCTCTGCGTTCAACAGTCAGT 593 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 540 ACCAGAAAAACAACGACAAAGCGAAACCGGCGTCGGTGATCTCTGCGTTCAACAGTCAAT 599 Query 594 TACCGGGAACACAATCGATTGCCGCCACGCTATTCACGGCCACTCCGGCGATTCCGGATC 653 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 600 TACCGGGAACACAATCGATCGCCGCCACGCTATTCACAGCCACTCCGGCGATTCCGGATC 659 Query 654 ACGTTTTAACGACGGCGTTTCAGATCGGAACGAAAGAAATCGAAAAGATCAAATCCAAGT 713 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| |||| Sbjct 660 ACGTTTTAACGACGACGTTTCAAATCGGAACGAAAGAAATCGAAAAAATCAAATCTAAGT 719 Query 714 TTGCTCCCAAGAAAGTCTAAAAATTGCGt--ttgt-tatatatatttttaattttattaa 770 |||||||||||||||||||||||| |||| || | |||||||||||| ||||||||||| Sbjct 720 TTGCTCCCAAGAAAGTCTAAAAATCGCGTCGTTATATATATATATTTTAAATTTTATTAA 779 Query 771 tttgtttttaA 781 || |||||||| Sbjct 780 TTGGTTTTTAA 790 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37977015132 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5