BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486733
Length=2654
Score E
Sequences producing significant alignments: (Bits) Value
AT3G62270.1 | Symbols: | HCO3- transporter family | chr3:23042... 4098 0.0
AT2G47160.2 | Symbols: BOR1 | HCO3- transporter family | chr2:1... 2010 0.0
> AT3G62270.1 | Symbols: | HCO3- transporter family | chr3:23042284-23046048
REVERSE LENGTH=2771
Length=2771
Score = 4098 bits (2219), Expect = 0.0
Identities = 2505/2637 (95%), Gaps = 44/2637 (2%)
Strand=Plus/Plus
Query 1 ACTCTTCGCCACTTTCTTGTCATCCAAACAATTACACAGTTCCCTTTTTCTCCATTATTG 60
|||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1 ACTCTTCGTCACTTTCTTGTCATCCAAACAA-TACACAGTCCCCTTTTTCTCCATTATTA 59
Query 61 CTTCTCaaaaaaaaTCATGTAAATTTGTTTCATGAATCGTTCTCAATTTTCTTCAACGAG 120
||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||||||||
Sbjct 60 CTTCTCAAAAAAAATCATGTAAATTTGTTCCATGAATCATTCCCAATCTTCTTCAACGAG 119
Query 121 ATTCATTGTTGTTACGAGCT-CTTCAATATTGGGTTCTTTGCTTCT-G-T-GT-CT-TCT 174
|||||||||| ||||||||| ||| |||||| |||| ||||||| | | | | | |||
Sbjct 120 ATTCATTGTTATTACGAGCTCCTT-AATATTTGGTTTTTTGCTTTTAGCTCTTATTGTCT 178
Query 175 ---TATCTG-G-A----T-TTCTATACCCTAAAC-T-T-GTATTGAGAATGTTCTGTAAT 221
| | || | | | |||||| |||||||| | | |||||||||||||||| ||||
Sbjct 179 GGATTTTTGTGCATTTTTCTTCTATCCCCTAAACTTGTAGTATTGAGAATGTTCTCTAAT 238
Query 222 ATGGGTTTCTTCGATTTCAAGTAGTCTCCTTTTTCGTGTCTCCCTCATATCGGGTTTAAA 281
|| || | ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 239 AT-GG-------G-TTTCAAGTAGTCTCC-TTTTCGTGTCTCCCTCATATCGGGTTTAAA 288
Query 282 CTCA---TCT---TC-TC--CGAGAGTGTTTAACCGAAGAAGCCCTCCAAGTGTTTGACG 332
|||| ||| || || || |||||| ||||| ||||||| ||||||||||| ||||
Sbjct 289 CTCATCTTCTAACTCTTCTTCGCGAGTGTCTAACCAAAGAAGCTCTCCAAGTGTTCGACG 348
Query 333 ATTTGTCTGAGAGAGATaa--aaaaaCAGAGGAACTTGAAAACAGAGTAATTTACAGAAA 390
|||||||||| ||| | || |||||||||| ||||| |||||||||||||||||||| |
Sbjct 349 ATTTGTCTGATAGA-A-AACGAAAAACAGAGTAACTTAAAAACAGAGTAATTTACAGAGA 406
Query 391 GAAGCCATCATGGAAGAGACTTTTGTTCCGTTTGAAGGTATCAAGAATGATGTTAAAGGA 450
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 407 GAAGCCACCATGGAAGAGACTTTTGTTCCGTTTGAAGGTATCAAGAATGATCTTAAAGGA 466
Query 451 AGGTTAATGTGCTATAAACAAGATTGGACCGGAGGAATCAAAGCTGGATTTAGGATTCTA 510
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 467 AGGTTAATGTGCTACAAACAAGATTGGACCGGAGGAATCAAAGCTGGGTTTAGGATTCTG 526
Query 511 GCTCCTACCACATACATATTCTTCGCGTCTGCGATTCCTGTTATTTCATTCGGCGAACAG 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 527 GCTCCTACCACATACATATTCTTCGCGTCTGCGATTCCTGTTATTTCATTCGGCGAACAG 586
Query 571 TTGGAACGAAGCACTGATGGAGTTCTTACCGCTGTTCAGACACTGGCCTCTACAGCCATC 630
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 TTGGAACGAAGCACTGATGGAGTTCTTACCGCTGTTCAGACACTGGCCTCTACAGCCATT 646
Query 631 TGCGGAATCATTCACTCGATCATCGGAGGCCAGCCTCTGCTTATACTCGGAGTTGCTGAG 690
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 647 TGTGGAATCATTCACTCGATCATCGGAGGCCAGCCTCTGCTTATACTCGGAGTTGCAGAG 706
Query 691 CCAACTGTAATTATGTACACATTCATGTTCAACTTTGCTAAAGGGAGACCTGAACTGGGA 750
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 707 CCAACTGTTATTATGTACACATTCATGTTTAACTTTGCTAAAGGGAGACCTGAACTGGGA 766
Query 751 CGCAATTTGTTCTTGGCTTGGTCTGGATGGGTTTGTGTCTGGACTTCGTTGATACTGTTT 810
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 767 CGCAATTTATTCTTGGCTTGGTCTGGATGGGTTTGTGTCTGGACTTCGTTGATACTGTTT 826
Query 811 GTGTTGGCTATATGTGGAGCTTGTTCAATTATCAACAGATTCACCAGAGTAGCTGGAGAA 870
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 827 GTGTTGGCTATATGTGGAGCTTGTTCATTTATCAACAGATTCACCAGAGTAGCTGGAGAA 886
Query 871 TTGTTTGGACTTCTTATAGCTATGCTCTTCATGCAACAAGCCATCAAAGGATTAGTCGAT 930
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 TTGTTTGGCCTTCTTATAGCTATGCTCTTCATGCAACAAGCCATCAAAGGATTAGTCGAT 946
Query 931 GAATTTCGAGCTCCTGCGAGAGAGGATCTGAAACTTGTGGAGTTTTTACCTTCCTGGAGA 990
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 947 GAATTTCGCGCTCCTGCGAGAGAGGATCTGAAACTTGTGGAGTTTTTACCTTCCTGGAGA 1006
Query 991 TTTGCAAATGGGATGTTTGCTTTGGTTCTTTCCTTTGGTCTTCTGATAACTGCACTTAGA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1007 TTTGCAAATGGGATGTTTGCTTTGGTTCTTTCCTTTGGTCTTCTGATAACTGCACTTAGA 1066
Query 1051 AGCAGAAAAGCCAGATCATGGAGATATGGAACAGGCTGGCTTAGAAGTTTAATAGCTGAC 1110
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1067 AGCAGAAAAGCAAGATCATGGAGATATGGAACAGGCTGGCTTAGAAGTTTAGTAGCTGAC 1126
Query 1111 TATGGTGTGCCACTCATGGTTCTGGTGTGGACCGGTGTCTCGTACATCCCAACAGGAGAT 1170
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1127 TATGGTGTGCCACTCATGGTTCTGGTGTGGACCGGTGTCTCCTACATCCCAACAGGAGAT 1186
Query 1171 GTTCCAAAAGGAATTCCTCGGCGACTTTTTAGCCCAAATCCTTGGTCCCCTGGTGCTTAT 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1187 GTTCCAAAAGGAATTCCTCGGCGACTTTTTAGCCCAAATCCTTGGTCCCCTGGTGCTTAT 1246
Query 1231 GAGAATTGGACTGTCGTAAAGGAGATGCTTCAAGTTCCAATTGTCTACATAATTGGGGCA 1290
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1247 GAGAATTGGACTGTTGTAAAGGAGATGCTTCAAGTTCCAATTGTCTACATAATTGGAGCA 1306
Query 1291 TTCATTCCAGCAACAATGATTGCAGTTCTTTACTACTTCGATCATAGTGTAGCATCACAG 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1307 TTCATTCCAGCAACAATGATTGCAGTTCTTTACTACTTCGATCATAGTGTAGCATCACAG 1366
Query 1351 CTTGCGCAGCAGAAAGAATTTAATTTGAGAAAACCATCTTCTTACCACTATGATCTGCTG 1410
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1367 CTTGCGCAGCAGAAAGAATTCAATTTGAGAAAACCATCTTCTTACCACTATGATCTGCTT 1426
Query 1411 CTTCTTGGGTTTCTGACCTTAATGTGTGGTCTACTTGGAATTCCTCCATCAAATGGAGTC 1470
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1427 CTTCTTGGATTTCTGACCTTAATGTGTGGTCTACTTGGAATTCCTCCATCAAATGGAGTC 1486
Query 1471 ATCCCTCAGTCACCAATGCATACCAAGAGCTTAGCAACACTAAAATATCAGCTGCTTCGG 1530
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1487 ATCCCTCAATCACCAATGCATACTAAGAGCTTAGCAACACTAAAATATCAGCTGCTTCGG 1546
Query 1531 AACAGACTAGTTGCAACTGCACGCAGAAGCATCAAGCAGAATGCGAGTTTAGGACAGTTG 1590
|||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||
Sbjct 1547 AACAGACTAGTTGCAACTGCTCGCAAAAGCATCAAGCAGAATGCGAGTCTAGGACAGTTG 1606
Query 1591 TATGGAAACATGCAAGATGCTTATAATCAGATGCAGACTCCATTAGTCTACCAGCAGCCT 1650
||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1607 TATGGAAACATGCAAGATGTTTATAATCAAATGCAGACTCCATTAGTCTACCAACAGCCT 1666
Query 1651 CAGGGTCTGAAAGAGCTAAGAGAATCAACAATCCAAGCAACAACATTCACAGGAAATCTT 1710
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1667 CAGGGTCTGAAAGAGCTAAGAGAATCAACAATCCAAGCAACAACATTCACAGGAAATCTC 1726
Query 1711 GATGCTCCAGTTGATGAGACTCTGTTTGATATCGAGAAAGAGATCGATGATTTATTGCCA 1770
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1727 GATGCTCCAGTTGATGAGACTCTGTTTGATATCGAGAAAGAGATTGATGATTTATTGCCA 1786
Query 1771 ATTGAAGTCAAAGAACAGAGAGTAAGCAACTTGCTTCAAGCAATAATGGTTGGAGGATGT 1830
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 1787 ATTGAAGTCAAAGAACAGAGAGTAAGCAACTTGCTTCAAGCAGTAATGGTTGGAGGGTGT 1846
Query 1831 GTTGCAGCTATGCCTCTCCTTAAAATGATCCCTACATCAGTCCTTTGGGGCTACTTTGCC 1890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1847 GTTGCAGCTATGCCTCTCCTTAAAATGATCCCTACATCAGTCCTTTGGGGCTACTTTGCC 1906
Query 1891 TTCATGGCAATTGAGAGCTTACCCGGAAACCAATTCTGGGAAAGAATCTTACTTCTCTTC 1950
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1907 TTCATGGCAATCGAAAGCTTACCCGGAAACCAATTCTGGGAAAGAATCTTACTTCTCTTC 1966
Query 1951 ACAGCCCCAAGTCGTCGATTCAAGGTCCTTGAAGATAACCACGCAACATTCGTGGAAACC 2010
||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1967 ACAGCTCCTAGTCGTCGATTCAAGGTCCTTGAAGATAACCACGCGACATTCGTGGAAACC 2026
Query 2011 GTTCCATTCAAAACGATCGCAATGTTCACAATTTTCCAAACAACTTATCTCTTAACTTGC 2070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2027 GTTCCATTCAAAACGATCGCAATGTTCACAATTTTCCAAACAACTTATCTCTTAACTTGC 2086
Query 2071 TTTGGTCTCACGTGGATCCCAATCGCTGGAGTTATGTTCCCTCTAATGATCATGTTTCTA 2130
||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct 2087 TTTGGTCTCACGTGGATACCAATCGCTGGAGTTATGTTCCCTCTACTGATCATGTTTCTG 2146
Query 2131 ATACCCGTAAGGCAATATACCCTCCCAAGATTCTTCAAAAGTGCTCATCTTCAGGACTTA 2190
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 ATACCCGTAAGGCAATATATCCTCCCAAGATTCTTCAAAAGTGCTCATCTTCAGGACTTA 2206
Query 2191 GACGCAGCAGAGTATGAAGAAGCACCCGCTTTACCATTCCATCTCGCAGTACCGGAAGCT 2250
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2207 GACGCAGCAGAGTACGAAGAAGCACCCGCTTTACCGTTCCATCTCGCAGTACCGGAAGCT 2266
Query 2251 GAGATGGGATCAACAGCTTCGTATCCATGTGATTCTGAGATTCTTGATGAGTTTATTACA 2310
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2267 GAGATGGGATCAACTGCTTCGTATCCATGTGATTCTGAGATTCTTGATGAGTTTATTACA 2326
Query 2311 AGAAGCAGAGGAGAGTTTAGACACACATGTAGTCCTAAAGTTACTAGTTCGACTTCAACG 2370
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2327 AGAAGCAGAGGAGAGTTTAGACACACATGTAGTCCTAAAGTTACTAGTTCGACTTCAACA 2386
Query 2371 CCGGTTTATAATCGGAATCTGTCTCAAGTGTTTAGTCCTAGAGTGAATGATTTAAGAGGT 2430
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct 2387 CCGGTTTATAATCGGAATCTCTCTCAAGTGTTTAGTCCTAGAGTGATTGATTTAAGAGGT 2446
Query 2431 GAGATGAGTCCTAGGCTCGCCGGGAAAGGGCAAAGTAGTCCAAAGCCGAGTCCTTTAAAC 2490
||||||||||| |||||| |||||||||| |||| |||||||||||||||||||||||||
Sbjct 2447 GAGATGAGTCCAAGGCTCTCCGGGAAAGGCCAAAATAGTCCAAAGCCGAGTCCTTTAAAC 2506
Query 2491 CCATCATCGTCGTCGAAATGAGTTTACCGATGATGGAGGCTTAATGAAACTGGAGGAGAT 2550
|||||||| ||||||||||||||||||||||||||||||||| || |||| |||||||||
Sbjct 2507 CCATCATCATCGTCGAAATGAGTTTACCGATGATGGAGGCTTGATAAAACCGGAGGAGAT 2566
Query 2551 TATGTTTAAAATTAGTTGATTAATTGATCTTGGATCTAATGCTTTCTTGAGTTTTTT 2607
||||||||||||||||| |||||||||| ||| |||| |||| ||||||||||||||
Sbjct 2567 TATGTTTAAAATTAGTTAATTAATTGATGTTGTATCTTATGCATTCTTGAGTTTTTT 2623
> AT2G47160.2 | Symbols: BOR1 | HCO3- transporter family | chr2:19357478-19361147
REVERSE LENGTH=2812
Length=2812
Score = 2010 bits (1088), Expect = 0.0
Identities = 1639/1903 (86%), Gaps = 45/1903 (2%)
Strand=Plus/Plus
Query 586 GATGGAGTTCTTACCGCTGTTCAGACAC-TGGCCTCTACAGCCATCTGCGGAATCATTCA 644
||||||||||| || |||||||| || | | || ||||||||||| ||||| || || ||
Sbjct 622 GATGGAGTTCTCACGGCTGTTCAAAC-CTTAGCATCTACAGCCATTTGCGGTATGATACA 680
Query 645 CTCGATCATCGGAGGCCAGCCTCTGCTTATACTCGGAGTTGCTGAGCCAACTGTAATTAT 704
||||| |||||||| ||||| |||||||| ||||| ||||| ||||| ||||| |||||
Sbjct 681 TTCGATTATCGGAGGTCAGCCACTGCTTATTCTCGGTGTTGCAGAGCCTACTGTGATTAT 740
Query 705 GTACACATTCATGTTCAACTTTGCTAAAGG-GAGACCTGAACTGGGACGCA-ATTTGTTC 762
||||||||||||||| |||||||| ||||| ||||||||| ||||||| | | |||||
Sbjct 741 GTACACATTCATGTTTAACTTTGC-AAAGGCCAGACCTGAATTGGGACG-AGACCTGTTC 798
Query 763 TTGGCTTGGTCTGGATGGGTTTGTGTCTGGACTTCGTTGATACTGTTTGTGTTGGCTATA 822
||||| |||||||||||||||||||| |||||| | ||||| |||||||||||||| |||
Sbjct 799 TTGGCGTGGTCTGGATGGGTTTGTGTTTGGACTGCTTTGATGCTGTTTGTGTTGGCAATA 858
Query 823 TGTGGAGCTTGTTCAATTATCAACAGATTCAC-CAGAGTAGCTGGAGAATTGTTTGGACT 881
|||||||||||||| || ||||| || || || | |||||||||||||||||||||||||
Sbjct 859 TGTGGAGCTTGTTCTATCATCAATAGGTTTACTC-GAGTAGCTGGAGAATTGTTTGGACT 917
Query 882 TCTTATAGCTATGCTCTTCATGCAACAAGCCATCAAAGGATTAGTCGATGAATTTCG-AG 940
||||| |||||||| |||||||| |||||||||||||| |||| |||||||| || |
Sbjct 918 GCTTATTGCTATGCTTTTCATGCAGCAAGCCATCAAAGGGCTAGTTGATGAATTCCGCA- 976
Query 941 CTCCTGCGA-GAGAGGATCTGAAACTTG-TGGAGTTTTTACCTTCCTGGAGATTTGCAAA 998
||||| | |||| ||| ||| | || |||||| |||||||||||||| ||||| ||
Sbjct 977 TTCCTG-AACGAGAAAATCAGAAGC-TGAAGGAGTTCTTACCTTCCTGGAGGTTTGCTAA 1034
Query 999 TGGGATGTTTGCTTTGGTTCTTTCCTTTGGTCTTCTGATAACTGCACTTAGAAGCAGAAA 1058
||||||||||||| ||||||| |||||||| ||||| | |||| |||||||||||||||
Sbjct 1035 TGGGATGTTTGCTCTGGTTCTCTCCTTTGGCCTTCTTCTGACTGGACTTAGAAGCAGAAA 1094
Query 1059 AGCCAGATCATGGAGATATGGAACAGGCTGGCTTAGAAGTTTAATAGCTGACTATGGTGT 1118
||||||||||||| | || ||||| |||||||| ||||| ||||||||||||||||||||
Sbjct 1095 AGCCAGATCATGGCGGTACGGAACTGGCTGGCTCAGAAGCTTAATAGCTGACTATGGTGT 1154
Query 1119 GCCACTCATGGTTCTGGTGTGGACCGGTGTCTCGTACATCCCAACAGGAGATGTTCCAAA 1178
||||||||||| || ||||||||||||||||| ||||| ||| ||||||||||||||||
Sbjct 1155 ACCACTCATGGTGCTCGTGTGGACCGGTGTCTCCTACATTCCAGCAGGAGATGTTCCAAA 1214
Query 1179 AGGAATTCCTCGGCGACTTTTTAGCCCAAATCCTTGGTCCCCTGGTGCTTATGAGAATTG 1238
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||
Sbjct 1215 AGGAATTCCTCGGCGACTTTTTAGCCCAAATCCTTGGTCTCCTGGTGCTTATGGGAACTG 1274
Query 1239 GACTGTCGTAAAGGAGATGCTTCAAGTTCCAATTGTCTACATAATTGGGGCATTCATTCC 1298
||| || ||||||||||||||| | |||||||| |||||||||||||| || ||||||||
Sbjct 1275 GACCGTAGTAAAGGAGATGCTTGATGTTCCAATCGTCTACATAATTGGAGCTTTCATTCC 1334
Query 1299 AGCAACAATGATTGCAGTTCTTTACTACTTCGATCATAGTGTAGCATCACAGCTTGCGCA 1358
|||| |||||||||| || |||||||||||||| ||||||||||| |||||||| |||||
Sbjct 1335 AGCATCAATGATTGCTGTGCTTTACTACTTCGACCATAGTGTAGCTTCACAGCTCGCGCA 1394
Query 1359 GCAGAAAGAATTTAATTTGAGAAAACCATCTTCTTACCACTATGATCT-GCTGCTTCTTG 1417
|||||||||||| |||||||||||||| ||||||||||||||||| || ||| |||||||
Sbjct 1395 GCAGAAAGAATTCAATTTGAGAAAACCGTCTTCTTACCACTATGA-CTTGCTTCTTCTTG 1453
Query 1418 GGTTTCTGACCTTAATGTGTGGTCTACTTGGAATTCCTCCATCAAATGGAGTCATCCCTC 1477
|||||||||| ||||||||||||||||||||| | ||||||||||| || ||||| ||||
Sbjct 1454 GGTTTCTGACATTAATGTGTGGTCTACTTGGAGTCCCTCCATCAAACGGTGTCATTCCTC 1513
Query 1478 AGTCACCAATGCATACCAAGAGCTTAGCAACACTAAAATATCAGCTGCTTCGGAACAGAC 1537
| || |||||||||||||||||||||||||| || ||||| ||| ||||||| |||||||
Sbjct 1514 AATCTCCAATGCATACCAAGAGCTTAGCAACTCTTAAATACCAGTTGCTTCGTAACAGAC 1573
Query 1538 TAGTTGCAACTGCACGCAGAAGCATCAAG-CAGAATGCGAGTTTAGGACAGTTGTATGGA 1596
| || ||||| ||||| ||||| ||||| || ||||||||||| || || | |||| |
Sbjct 1574 TGGTCGCAACAGCACGAAGAAGTATCAAAACA-AATGCGAGTTTGGGTCAACTCTATG-A 1631
Query 1597 -AACATGCAAGATGCTTATAATCAGATGCAGACTCCATTAGTCTACCAGCAGCCTCAGGG 1655
|| |||||||| ||||| |||| |||||||| |||||||| |||||||| || || ||
Sbjct 1632 CAATATGCAAGAAGCTTACCATCACATGCAGACACCATTAGTATACCAGCAACCCCAAGG 1691
Query 1656 TCTGAAAGAGCT-AAGAGAATCAACAATCCAAGCAACAACATTCACAGGAAATCTTGATG 1714
||| |||||||| ||| ||||| ||||||||||| || |||||||| ||||| || |||
Sbjct 1692 TCTAAAAGAGCTCAAG-GAATCGACAATCCAAGCTACTACATTCACCGGAAACCTCAATG 1750
Query 1715 CTCCAGTTGATGAGACTCTGTTTGATATCGAGAAAGAGATCGATGATTTATTGCCAATTG 1774
||||||||||||| |||||||| || || |||||||| || ||||||||| | ||| |||
Sbjct 1751 CTCCAGTTGATGAAACTCTGTTCGACATAGAGAAAGAAATAGATGATTTACTACCAGTTG 1810
Query 1775 AAGTCAAAGAACAGA-GAGTAAGCAACTTGCTTCAAG-CAATAATGGTTGGAGGATGTGT 1832
||||||||||||| | | ||||||||||||||||| | | | |||||| |||||||| ||
Sbjct 1811 AAGTCAAAGAACA-ACGGGTAAGCAACTTGCTTCA-GTCTACAATGGTAGGAGGATGCGT 1868
Query 1833 TGCAGCTATGCCTCTCCTTAAAATGATCCCTACATCAGTCCTTTGGGGCTACTTTGCCTT 1892
||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1869 TGCAGCTATGCCTATCCTTAAAATGATCCCAACATCAGTCCTTTGGGGCTATTTTGCCTT 1928
Query 1893 CATGGCAATTGAGAGCTTACCCGGAAACCAATTCTGGGAAAGAATCTTACTTCTCTTCAC 1952
|||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1929 CATGGCCATCGAAAGCTTACCCGGAAACCAATTCTGGGAAAGAATCTTACTTCTGTTCAC 1988
Query 1953 AGCCCCAAGTCGTCGATTCAAGGTCCTTGAAGATAACCACGCAACATTCGTGGAAACCGT 2012
||||||||||| || |||||||| ||||||||| ||||||| |||||||||||||||||
Sbjct 1989 CGCCCCAAGTCGCCGCTTCAAGGTTCTTGAAGATTACCACGCGACATTCGTGGAAACCGT 2048
Query 2013 TCCATTCAAAACGATCGCAATGTTCACAATTTTCCAAACAACTTATCTCTTAA-CTTGCT 2071
||||||||| ||||| |||||||| || |||||||||| ||||||||||| | || |||
Sbjct 2049 TCCATTCAAGACGATTGCAATGTTTACTCTTTTCCAAACGACTTATCTCTTGATCT-GCT 2107
Query 2072 TTGGTCTCACGTGGATCCCAATCGCTGGAGTTATGTTCCCTCTAATGATCATGTTTCT-A 2130
|||||||||| ||||| |||||||| ||||| ||||||||| ||||||||||||| || |
Sbjct 2108 TTGGTCTCACATGGATACCAATCGCAGGAGTCATGTTCCCTTTAATGATCATGTT-CTTA 2166
Query 2131 ATACCCGTAAGGCAATATAC-CCTCCCAAGATTCTTCAAAAGTGCTCATCTTCAGGACTT 2189
|| |||||| | |||||| | |||||| |||||||||||| | |||||||||||||||||
Sbjct 2167 ATCCCCGTACGACAATAT-CTCCTCCCTAGATTCTTCAAAGGAGCTCATCTTCAGGACTT 2225
Query 2190 AGACGCAGCAGAGTATGAAGAAGCACCCGCTTTACCATTCCATCTCGCAGTACCGGAAGC 2249
||| |||||||||||||||||||| || |||||||| ||| ||||||||| | |||| |
Sbjct 2226 AGATGCAGCAGAGTATGAAGAAGCTCCAGCTTTACCCTTCAATCTCGCAG--C-GGAAAC 2282
Query 2250 TGAGATGGGATCAACAGCTTCGTATCCATGTGATTCTG-AGATTCTTGATGAGTTTATTA 2308
||||| ||||| ||| | |||||||| | |||| || |||||||||||||| |||| |
Sbjct 2283 GGAGATTGGATCCACAACATCGTATCCGGGAGATT-TGGAGATTCTTGATGAGGTTATGA 2341
Query 2309 CAAGAAGCAGAGGAGAGTTTAGACACAC-ATGTAGTCCTAAAGTTACTAGTTCGACTTCA 2367
| ||||||||||||||||||||||||| | |||||||||| || || ||||| | |||
Sbjct 2342 CCCGAAGCAGAGGAGAGTTTAGACACACGA-GTAGTCCTAAGGTGACAAGTTCAAGTTCG 2400
Query 2368 ACGCCGGTTTATAATCGGAATCTGTCTCAAGTGTTTAGTCCTAGAGTGAATG-ATTTAAG 2426
|| || || ||||||||| | |||| |||||||||||||| ||||||| || | | | |
Sbjct 2401 ACTCCAGTCAATAATCGGAGTTTGTCACAAGTGTTTAGTCCAAGAGTGAGTGGAATCAGG 2460
Query 2427 A-GG-TGAGATGAGTCCTAG-GCTCGCCGGGAA-AGGGCAAAG 2465
|| | ||||||||||| | | ||| |||||| || |||||
Sbjct 2461 TTGGGTCAGATGAGTCCTCGAG-TCGTCGGGAATAGTCCAAAG 2502
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 131788559261
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5