BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486808 Length=464 Score E Sequences producing significant alignments: (Bits) Value AT3G63050.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 542 1e-153 > AT3G63050.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G48075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:23297891-23298389 REVERSE LENGTH=499 Length=499 Score = 542 bits (293), Expect = 1e-153 Identities = 393/439 (90%), Gaps = 16/439 (4%) Strand=Plus/Plus Query 1 ATGCAGAGAGGAAAAGATGATG---ACAAGAGAGGCATTTTTCGCCGGCTTTTAAGGTTG 57 |||||||||| ||| ||||||| |||||||||| ||||||| |||||||||| |||| Sbjct 18 ATGCAGAGAGCAAATGATGATGACAACAAGAGAGGGTTTTTTCGGCGGCTTTTAAAGTTG 77 Query 58 GTGGTCGTTAAACTCAT-----G-AAGGGTCACAAGGAAGATAGGTCTGTGACGAAGAAA 111 ||| ||||||||||||| | ||||||||||||||||| ||||||||| |||||| Sbjct 78 GTGTTCGTTAAACTCATGGCGGGTGCGGGTCACAAGGAAGATAAGTCTGTGACAAAGAAA 137 Query 112 CTGATCAAGAAAGAATCAAAATCTGATATCACAATTTATTTCAAGCAAAGAGAAGACTCC 171 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 138 CTGATCAAGAAAGAATCAAAGTCTGATATCACAATTTATTTCAAGCAAAGAGAAGAGTCC 197 Query 172 GAGGATAAC---GCAAATCCCATCAATTTCTCAAGAAGCTCGGAGAAAGAGAGGGTGATC 228 ||||||||| || |||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 198 GAGGATAACAACGCTAATCCCATCAATATCTCAAGAAGCTCGGAGAAAGATAGGGTGATC 257 Query 229 ATGCTGGTTAATGGTAGTAACGGCTCAAAGAAGAACTTGGCGAGTGAGCTGAGCGTTAGG 288 |||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| Sbjct 258 ATGCTGGTTAATGGTAGTAACGGCTCAAAGAAGAACTTAGCGAGTGAGCTAAACGTTAGG 317 Query 289 CGATCAGTAGCTCAAACTGGAGCTGGTA-TG--ACACAGCCGAAGCCTCTTTTCAATGAT 345 ||||||||||||||||||||||||||| || |||||||||||||||||||| |||||| Sbjct 318 CGATCAGTAGCTCAAACTGGAGCTGGTGGTGTGACACAGCCGAAGCCTCTTTTGAATGAT 377 Query 346 ATAAATACGAAATCGCATGCTTTCATTGAGAGTAGACTCGCCAAGATGCGAAAAGGCTTA 405 ||||| || ||||| |||||||||||| |||||||||||| ||||||||||||||||| Sbjct 378 ATAAACACTAAATCACATGCTTTCATTCAGAGTAGACTCGAGAAGATGCGAAAAGGCTTG 437 Query 406 TAGCCAAAAAACATGATGA 424 |||||||| |||||||| Sbjct 438 TAGCCAAATG-CATGATGA 455 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22052790533 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5