BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486813 Length=710 Score E Sequences producing significant alignments: (Bits) Value AT3G63095.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 880 0.0 > AT3G63095.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:23315506-23316258 FORWARD LENGTH=753 Length=753 Score = 880 bits (476), Expect = 0.0 Identities = 673/758 (89%), Gaps = 53/758 (7%) Strand=Plus/Minus Query 1 TCAGCTAATGAGTCTGCCTCCACAGACGAAAGTGACGATGCATGACTCATCCACAAAGAC 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 753 TCAGCTAATGAGTCTGCCTCCACAGACGAAAGTGACGATACATGACTCATCCACAAAGAC 694 Query 61 TGTATAGTTATGAATTGGTTTGGCTAGCAATGGCGGAAGCCGGACCAGAAGGTCGCACAC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 693 TGTATAGTTATGAATTGGTTTGGCTAGCAATGGCGGAAGCCGGACCAGAAGGTCGCACAC 634 Query 121 GCACTCGTTGTCCATTTGCTTCAACCACTTGCAGCAATCTTGTTGCGCAAACGTCTCTTC 180 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 633 GCACTCGTTGTCCATTTGCTTCAACCACTTGCAGCACTCTTGTTGCGCAAACGTCTCTTC 574 Query 181 ACtgtgtcgatgatggtgtcggtggtggtggcggtggtgtcgacggcggtggtgatcgtc 240 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 573 TCTGTGTCGATGATGGTGGCGGTGGTGGTGGCGGTGGTGTCGACGGCGGTGTTGATCGT- 515 Query 241 gtggCTGTTGTCGTCATTATTGTGGTGGTCG-CTGTCATGATCATGGTCGTGATTATGGT 299 | | |||||||||||||| |||||||||||| | |||||||| |||||||||||| | || Sbjct 514 G-G-CTGTTGTCGTCATTGTTGTGGTGGTCGGC-GTCATGATTATGGTCGTGATTGTTGT 458 Query 300 CATTGTGATCATTGTCACGGTCGTGGTTATGGTTATggtcatcgtgatcacggtcacgat 359 ||||||||||||||||| |||| |||||||||| ||||||||||||| |||||||| ||| Sbjct 457 CATTGTGATCATTGTCATGGTCATGGTTATGGTCATGGTCATCGTGAGCACGGTCATGAT 398 Query 360 c------acggtc----tcg---tca---tca---tca---t---ggtcatcgtc---at 391 | |||||| ||| ||| ||| ||| | |||||||||| || Sbjct 397 CGCGGTCACGGTCACGGTCGCGGTCACGGTCACGGTCACGGTCACGGTCATCGTCGTCAT 338 Query 392 ggtcgtgatcgtggtcatcatcgtggtcgtggtcatcatcatcatcgtggtcatcgtcat 451 |||||||||| | ||||| ||||| |||||||||||||| | || |||||||| |||| Sbjct 337 GGTCGTGATCATCGTCATGGTCGTGATCGTGGTCATCATCGTGGTCATGGTCATCATCAT 278 Query 452 gatcgtggtc---gt-g-g-tcatggtc------atggtcatggtcgtggt-g-g-t--- 493 ||||||||| || | | || ||||| ||||||||||||||||| | | | Sbjct 277 CATCGTGGTCATCGTCGTGGTCGTGGTCGTGGTCATGGTCATGGTCGTGGTCGTGGTGGT 218 Query 494 catggtcaggaggcgggggagcgatgggaggaggaggtggggtaatgggggcaggtggtg 553 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 217 CATGTTCAGGAGGCGGGGGAGCGATGGGAGCAGGAGGTGGGGTAATGGGGGCAGGTGGTG 158 Query 554 ggaCAGTGTGCATTGGGAGACGTGAGCAGGCGTAGTTAGCCAGAGCGTATTGAGACGCGC 613 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct 157 GGACAGTGTGCATTGGGAGACGTGAGCAGGCGTAGTTAGCTAGGGCGTATTGAGACGCGC 98 Query 614 ACAGTGGACGTGGCGGTGGAATCTGTATCACTCTCTGGCCTCTTGTGAAAGAGGAGAGAG 673 | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 97 ATAGTGGACGTGGTGGTGGAATCTGTATCACTCTCTGGCCTCTTGTGAAAGAGGAGAGAG 38 Query 674 CGAGAGCCAGAGT-AGCTGCAATAAAAAGTGTATCCAT 710 ||||||||||||| | |||||||||||||||||||||| Sbjct 37 CGAGAGCCAGAGTTA-CTGCAATAAAAAGTGTATCCAT 1 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34410390695 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5