BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486889
Length=4299
Score E
Sequences producing significant alignments: (Bits) Value
AT5G01770.1 | Symbols: RAPTOR1A, ATRAPTOR1A, RAPTOR2 | HEAT rep... 2410 0.0
AT3G08850.1 | Symbols: RAPTOR1B, ATRAPTOR1B, RAPTOR1 | HEAT rep... 859 0.0
> AT5G01770.1 | Symbols: RAPTOR1A, ATRAPTOR1A, RAPTOR2 | HEAT repeat
;WD domain, G-beta repeat protein protein | chr5:294313-301984
REVERSE LENGTH=4448
Length=4448
Score = 2410 bits (1305), Expect = 0.0
Identities = 1525/1633 (93%), Gaps = 7/1633 (0%)
Strand=Plus/Plus
Query 2669 GCAGCATCAGCATCTCACACTCCTTTGGCTGGCCTAGTTCGCTCATCCTCATGGTTTGAT 2728
|||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 2801 GCAGCATCAGCATCTCACACTCCTCTGGCTGGCCTAGTTCGCTCATCCTCTTGGTTTGAC 2860
Query 2729 ATGCATACAGGTCACCTGCCGCTAACATTTAGGACTCCTCCGGTAAGCCCTCCTCAAACA 2788
||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 2861 ATGCATACAGGCCACCTACCGTTAACATTTAGGACTCCTCCGGTAAGCCCTCCGCAAACA 2920
Query 2789 AGTTATTTAACTGGACTGAGGAGAGTTTGTTCACTAGAGCTCCGACCTCATCTGCTGGGT 2848
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2921 AGCTATTTAACTGGACTGAGGAGAGTTTGTTCGCTAGAGCTCCGACCTCATCTGCTGGGT 2980
Query 2849 TCTCCAGACTCTGGATTGGCTGATCCGCTTTTAGGCGTAAGCGGGTCTGAACGGAGTTTG 2908
||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct 2981 TCTCCCGACTCTGGATTGGCTGATCCGATTTTAGGTGTAAGCGGGTCTGAACGGAGTTTG 3040
Query 2909 CTTCCACAATCAACTATCTACAACTGGAGCTGTGGTTACTTTTCTAAACCTCTTCTTGGT 2968
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 3041 CTTCCACAATCAACTATCTACAACTGGAGCTGTGGTCACTTTTCCAAACCTCTTCTTGGC 3100
Query 2969 GGAGCAGATGCTAATGAAGAGATAGTAGGCCAAAGAGAAGAGAAAGAAAAGTTTTCGCTT 3028
||||||||||||||||||||||||| || |||||||||||| ||| |||||||||||||
Sbjct 3101 GGAGCAGATGCTAATGAAGAGATAGCAGCCCAAAGAGAAGAAAAAAAAAAGTTTTCGCTG 3160
Query 3029 GAGCGTATTGCAAAATGCCAGCATTCATCAATCAGCGGGATCAACAATATTCCTATTGCT 3088
|||| ||||||||||||||||||||||||||| |||||| ||| ||||||||| ||||||
Sbjct 3161 GAGCATATTGCAAAATGCCAGCATTCATCAATAAGCGGGCTCAGCAATATTCCGATTGCT 3220
Query 3089 AATTGGGATACAAAGTTTGAAACGGGAACAAAGATGGCCCTCCTTCACCCTTTTTCTCCT 3148
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3221 AATTGGGATACAAAGTTTGAAACGGGAACAAAGACGGCCCTCCTTCACCCTTTTTCTCCT 3280
Query 3149 ATTGTAGTTGCTGCCGATGAGAATGAACGGATCAGAGTGTGGAATTACGAGGAAGCAACT 3208
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 3281 ATTGTAGTTGCTGCCGATGAGAATGAACGGATTAGGGTGTGGAATTACGAGGAAGCAACT 3340
Query 3209 CTTCTTAATGGCTTTGATAATCACGATTTTCCCGAGAAAGGAATTTCAAAGCTCTGCTTT 3268
||||||||||||||||| ||| |||||||||| || |||||||||||||| |||||| ||
Sbjct 3341 CTTCTTAATGGCTTTGACAATAACGATTTTCCTGACAAAGGAATTTCAAATCTCTGCCTT 3400
Query 3269 GTCAATGAACTTGATGACTCTCTGCTACTTGTTGCCTCATGTGATGTTCCAACTCTTGCC 3328
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||
Sbjct 3401 GTCAATGAACTTGATGACTCTCTGCTACTTGTTGCCTCTTGTAATGTTCCAACTCTTTCC 3460
Query 3329 AGAGTGTCTTTTGCAATCCGTATATGGAAAGACTACGCAACAAAGGGTAGACAAAAACTT 3388
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3461 AGAGCGTCTTTTGCAATCCGTATATGGAAAGACTACGCAACAAAGGGTAGACAAAAACTT 3520
Query 3389 GTCACAGGGTTTTCTTCAATCCAAGGTCACAAGCCTGGTGCACGTGGCCTGAACGCTGTC 3448
|||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 3521 GTCACAGGGTTTTCGTCAATCCAAGGTCAGAAGCCTGGTGCAAGTGGCCTGAACGCTGTC 3580
Query 3449 GTGGACTGGCAACAGCAATCGGGTTACCTGTATGTTTCTGGGGAATCGTCATCAATCATG 3508
|||||||||||||| || || |||||||||||||||||||||||||||| ||||||||||
Sbjct 3581 GTGGACTGGCAACAACAGTCAGGTTACCTGTATGTTTCTGGGGAATCGTTATCAATCATG 3640
Query 3509 CTTTGGGACCTGGAGAGAGAACAGCTCGTCAAATCTGTGCCCTCTGAATCAGAGTGCAGC 3568
||||||||||||| | ||||||||||||||||||| |||||| |||||| | |||||||
Sbjct 3641 GTTTGGGACCTGGATAAAGAACAGCTCGTCAAATCTATGCCCTTTGAATCCGGGTGCAGC 3700
Query 3569 GTCACAGCCCTTTCGGCTTCTCAAGTGCATGGGAGTCAACTTGCTGCTGGTTTTGCGGAT 3628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 GTCACAGCCCTTTCGGCTTCTCAAGTGCATGGGAGTCAACTTGCTGCTGGTTTTGCGGAT 3760
Query 3629 GGATCTGTAAGACTCTACGACGTTCGGACACCTGACTTGCTTGTGTGTGCCACTCGGCCT 3688
|||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct 3761 GGATCTGTAAGACTCTACGACGTTCGCACACCTGACTTTCTTGTGTGCGCCACTCGGCCT 3820
Query 3689 CATCAGAGAGTAGAAAAAGTAGTTGGACTCAGCTTTCAGCCTGGACTCGATCCGGCAAAG 3748
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3821 CATCAGCGAGTAGAAAAAGTAGTTGGACTCAGCTTTCAGCCTGGACTCGATCCAGCAAAG 3880
Query 3749 ATTGTGAGCGCATCACAAGCAGGTGACATTCAGTTTCTGGACCTAAAAATAACAAAGAAG 3808
||||||||||||||||||||||||||||||||||||||||| || | || | ||||| ||
Sbjct 3881 ATTGTGAGCGCATCACAAGCAGGTGACATTCAGTTTCTGGATCTGAGAAGACCAAAGGAG 3940
Query 3809 ACATACCTAACGATAGACGCGCACCGAGGATCACTGACAGCATTGGGTGTCCATAGACAC 3868
|||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 3941 ACATACCTGACTATAGACGCGCATAGAGGATCACTGACAGCATTGGGTGTTCATAGACAT 4000
Query 3869 GCTCCAATCATAGCGAGCGGGTCAGCCAAACAGCTAATAAAAGTGTTCAGCCTTAAGGGA 3928
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 4001 GCTCCAATCATAGCGAGCGGGTCAGCAAAACAGCTAATAAAAGTGTTCAGCCTTAAAGGA 4060
Query 3929 GAACAACTTGGGATCATAAAGTACCACACTTCCTTCATGGCCCAAAAGATTGGCCCAGTC 3988
|| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 4061 GAGCAACTTGGGATCATAAAGTACCACACTTCCTTCATGGGCCAACAGATTGGCCCAGTC 4120
Query 3989 AGTTGCCTCGCCTTTCACCCTTACCAGGTATTGCTAGCTGCCGGAGCTGCTGGCTCCTTC 4048
||||||||||||||||||||||||||| | ||| |||| || || |||||||||||||||
Sbjct 4121 AGTTGCCTCGCCTTTCACCCTTACCAGATGTTGTTAGCCGCAGGGGCTGCTGGCTCCTTC 4180
Query 4049 GTCTCTTTATACACCCACCACAACACGCAACCACCTAGATAGATCATGACAACTAGTAAG 4108
||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||
Sbjct 4181 GTCTCCTTATACACCCACCACAACACACAATTACCAAGATAGATCATGACAACTAGTAAG 4240
Query 4109 TTAGTGAA-TGCAAAATGAATTTAGGGAGTTGGGGTAAAATTGGGTATTATTTGTAGAGT 4167
||| | || |||||| ||||| | || ||||||||||||||| ||| |||||| |||| |
Sbjct 4241 TTAATCAAATGCAAAGTGAATAT-GG-AGTTGGGGTAAAATTAGGTGTTATTTATAGAAT 4298
Query 4168 TGATTAATTAGCCTCCGATGAAAAGATGCAAGCAATACTAATTGAGGAGGCTTTGCCAAA 4227
||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct 4299 TGATTAACTAGCCTCCGATGAGAAGATCCAAGCAAAACTAATTGAGGAGGCTTTGCCAAA 4358
Query 4228 TA-AATTTACGCATATAAATGCTTTGTAAATAGTTCTTGTCATTCTCTGTCAACTTTAAC 4286
|| ||||||||||| ||||||||||||||||||| |||||||| ||||||||| |||
Sbjct 4359 TAGAATTTACGCATGTAAATGCTTTGTAAATAGTA---GTCATTCTGTGTCAACTTCAAC 4415
Query 4287 TATTTATTCCTTA 4299
|||||||||||||
Sbjct 4416 TATTTATTCCTTA 4428
Score = 1458 bits (789), Expect = 0.0
Identities = 1050/1168 (90%), Gaps = 49/1168 (4%)
Strand=Plus/Plus
Query 93 TTTGGATGGCATTAGGGGACTCGATGGTCTCCAGGCTCTCTCAATCTTCCGTTACCGTTG 152
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 207 TTTGGATGGCATTAGGGGACTTGATGGTCTCCAGGCTCTCTCAATCTTCCGTTACTGTTG 266
Query 153 TCACCAATCACCGCTAC-A--ACGACGACGACTGCG---CCTCCACTCACGATGATTCCC 206
|||||||||||| |||| | |||||||| |||||| ||||| |||||||||||||||
Sbjct 267 TCACCAATCACCTCTACGACGACGACGACAACTGCGCCTCCTCCGCTCACGATGATTCCC 326
Query 207 GCATGTCCATCATCGCCTCTCCCCCAAGCATTTACAATCATTTTGCTAGCAGCAGCTATG 266
| ||||||||||||||||| ||| || | || || || ||||||||||
Sbjct 327 GTGTGTCCATCATCGCCTCT--CCC-AG-------AGTC-----GCAAGTAGCAGCTATG 371
Query 267 AGAATCTCTCCTCCGCCACAAGCATGGCATACTTGCCTCAGACTGTTGTGCTCTGCGACC 326
|||| |||||| |||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 372 AGAACCTCTCCGCCGCCACAAGCATGGCATACTTGCCTCAGACTCTTGTGCTCTGTGACC 431
Query 327 TTAGACACGAGGCCTCCGAGGCCTTAGACATCGTCCGATCCCCC-AGATGGCGCCTTAAA 385
|||||||||| ||| || | |||||||||| | ||||| |||||||||||||||
Sbjct 432 TTAGACACGA------CGACGCATCCGACATCGTCC-AACCCCCAAGATGGCGCCTTAAA 484
Query 386 GAGCGAATGAAAACAGGATGTGTAGCTCTAGTTATGTGTTTGCACATTAGTGTTGATCCC 445
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct 485 GAGCGAATGAAAACAGGATGTGTTGCTCTAGTTATGTGTTTGCACATTACTGTTGATCCC 544
Query 446 CCTGATGTTATTAAGATCTCTCCATGCGCCACACTGGAATGCTGGATAGATCCTTTTTCT 505
||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||||||||||
Sbjct 545 CCTGATGTTATTAAGATTTCTCCCTGCGCAAGACTCGAATGCTGGATAGATCCTTTTTCT 604
Query 506 ATCTATCCACCAAGAAGAGCTCTTGAGACTATAGGCCAAAGCTTGAGCATTCAGTACGAG 565
|| | ||| |||||||||||||||||| |||| ||||||| |||||||||||||||||||
Sbjct 605 ATGTTTCCCCCAAGAAGAGCTCTTGAGGCTATTGGCCAAAACTTGAGCATTCAGTACGAG 664
Query 566 AGATGGCTGCCTCGGGCTCGATATAAGGTGGAACTGGATCCTACAAAGGACGATGTCAGG 625
||||||||| |||||||||||||||| || ||| ||||||||||||||||||||||||||
Sbjct 665 AGATGGCTGGCTCGGGCTCGATATAAAGTCGAATTGGATCCTACAAAGGACGATGTCAGG 724
Query 626 AAGCTGTGCTTGTCTTGCCGGAAA-ACTGCTAAGACTGAGCGAGTTTTGTTTCATTATAA 684
||||| |||||||||||||||||| | ||| ||||||||| ||||||||||||| |||||
Sbjct 725 AAGCTCTGCTTGTCTTGCCGGAAATA-TGCAAAGACTGAGAGAGTTTTGTTTCACTATAA 783
Query 685 CGGCCATGGTGTCCCCAAACCTACACCTAATGGTGAAATCTGGGTTTACAATAAGAATTT 744
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 784 CGGGCATGGTGTCCCTAAACCTACACCTAATGGTGAAATCTGGGTTTACAATAAGAATTT 843
Query 745 TACGCAGTACATTCCCTTGCCAGTCAGCCAACTTGATTCCTGGTTGAAGACACCCGCAAT 804
|||||||||||||||||||||||||||| | ||||||||||||||||| |||||| | ||
Sbjct 844 TACGCAGTACATTCCCTTGCCAGTCAGCGAGCTTGATTCCTGGTTGAAAACACCCACCAT 903
Query 805 TTATGTTTTTGACTGCTCTGCTGCTAGGCTCCTTGTCAATGCCTTCGCTGAGCTTCATGT 864
||| |||||||||||||||||||||||| | | ||||||||||||| ||| |
Sbjct 904 TTACGTTTTTGACTGCTCTGCTGCTAGGGTGATCCTCAATGCCTTCGCCGAG------G- 956
Query 865 TGGGGAATCTTCTGGCTCGTCTGGGCCCCCGAAAGACTGCATTCTACTGGCTGCTTGTGA 924
||| |||||||||| | | ||| ||| ||||| ||||||||||||||||||||
Sbjct 957 -GGG-AATCTTCTGGA-C--C----CCC--GAAGGACTGTATTCTACTGGCTGCTTGTGA 1005
Query 925 TGTACATGAGACACTTCCTCAGAGTGTTGAATTTCCAGCTGACGTGTTTACTTCTTGCCT 984
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1006 TGTACATGAGACACTTCCTCAGAGTGTTGAATTTCCAGCTGACGTTTTTACTTCTTGCCT 1065
Query 985 TACCACACCTATTAAGATCGCATTGAAATGGTTCTGCAGACGTTCTCTTCTGAAGGAATT 1044
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1066 CACAACACCTATTAATATCGCATTGAAATGGTTCTGCAGACGTTCTCTTCTGAAAGAATT 1125
Query 1045 TATAGATGAATCACTTATTGATAGAATTCCCGGCCGCCAAAATGACCGCAAAACATTGTT 1104
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1126 TATAGATGAATCACTTATTGATAGAATTCCCGGTCGCCAAAATGACCGTAAAACATTGTT 1185
Query 1105 AGGAGAGTTGAACTGGATCTTTACTGCAGTCACGGACACCATTGCCTGGAATGTGCTTCC 1164
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1186 AGGAGAGTTGAACTGGATCTTCACTGCAGTCACAGACACCATTGCCTGGAATGTGCTTCC 1245
Query 1165 TCGCGAACTTTTCCAGAGATTATTCAGACAGGACTTGTTGGTTGCTAGCCTTTTCCGGAA 1224
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1246 ACGCGAACTTTTCCAGAGATTATTCAGACAGGACTTGTTGGTTGCTAGCCTTTTCCGAAA 1305
Query 1225 TTTCTTACTTGCTGAGAGGATAATGCGG 1252
||||||||| ||||||||||||||||||
Sbjct 1306 TTTCTTACTAGCTGAGAGGATAATGCGG 1333
Score = 977 bits (529), Expect = 0.0
Identities = 606/643 (94%), Gaps = 5/643 (1%)
Strand=Plus/Plus
Query 2029 GGCTGCTGCTGTTTTTGCCTTGGGTACCTTACTTGATGTTGGGTTTGACTCTGGTAAAGG 2088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2128 GGCTGCTGCTGTTTTTGCCTTGGGTACCTTACTTGATGTTGGGTTTGACTCTGGTAAAGG 2187
Query 2089 TGTTCGTGACGAAGAATTTGATGATGATGAAAATATTATAATTGAAGATATTATGATAAA 2148
|||| |||| |||||||||||||||||||||||||| | ||||||||||||| |||||
Sbjct 2188 TGTTTGTGATGAAGAATTTGATGATGATGAAAATAT-AG--TTGAAGATATTATCATAAA 2244
Query 2149 AAGTCTCTTAGATGTAGTTTCAGATGGGAGCCCGCTTGTCCGAGCAGAAGTTGCTGTAGC 2208
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 2245 AAGTCTCTTAGATGTAGTTTCAGATGGGAGCCCGCTTGTCCGAACAGAGGTTGCTGTAGC 2304
Query 2209 TCTCGCACGGTTTGCCTTTGGACACAAACAACATCTAAAGTCAGTTGCAGCTTCATATTG 2268
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 2305 TCTCGCACGGTTTGCTTTTGGACACAAACAACATCTAAAGTCAGTTGCAGATTCATACTG 2364
Query 2269 GAAGCCCCAAAGTTCTCTGCGAACTTCTTTCCCTTCAATGGCCAAGTTTCACGACGCTGG 2328
||||||||||| |||||||||||||||| |||||||||||||||||||||| ||| ||||
Sbjct 2365 GAAGCCCCAAAATTCTCTGCGAACTTCTCTCCCTTCAATGGCCAAGTTTCATGACTCTGG 2424
Query 2329 AACTTCAACAATTGTTTCTTCACACATGGGTTCTCTGACTAGAGCTAGCCCTGATAGCCA 2388
||||||| | ||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2425 GACTTCAATAGTTGCTTCTTCAGACATGGGTTCTCTGACTAGAGCTAGCCCTGATAGCCA 2484
Query 2389 ACCAGTGGCTCGTGAAGGGAGGATCTCAAGCAGCCTCCATGAAGCTTCTTCCGGGCCAAT 2448
|||||||||||||||||| |||||||||||||||||||| ||| ||| |||||||| |||
Sbjct 2485 ACCAGTGGCTCGTGAAGGAAGGATCTCAAGCAGCCTCCAAGAACCTTTTTCCGGGCTAAT 2544
Query 2449 GCAAGGATCTCCATTATCTGATGATTCTTCCTTGCATTCTGAT-TCTGGAATCATCCATG 2507
|||||||||||||||| ||||||| || ||||||||||||||| | ||||||||||||||
Sbjct 2545 GCAAGGATCTCCATTAGCTGATGACTCCTCCTTGCATTCTGATGT-TGGAATCATCCATG 2603
Query 2508 ATGGTGTCAACAATGGAGTTGTCCATCAGCCAAGACCGCTGGATAATGCTATCTATTCGC 2567
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2604 ATGGTGTCAGCAATGGAGTTGTCCATCAGCCAAGACCGCTGGATAATGCTATCTATTCGC 2663
Query 2568 AGTGTGTTCTGGCTATGTTTACGTTAGCTAAAGATCCATCTCCACGTATTGCAAGCCTTG 2627
|| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2664 AGAGTGTTCTAGCTATGTTTACCTTAGCTAAAGATCCATCTCCACGTATTGCAAGCCTTG 2723
Query 2628 GGCGGCGTGTGCTATCTGTTCTTGGGATTGAACAAATTGTTGC 2670
||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 2724 GGCGGCGTGTGCTTTCTGTTATTGGGATTGAACAAATTGTTGC 2766
Score = 815 bits (441), Expect = 0.0
Identities = 495/521 (95%), Gaps = 4/521 (1%)
Strand=Plus/Plus
Query 1510 TCAGGTCTTACTTAGCCAGTGCCATCGGTTTCGTGCTCTTGTACTTCTTGGACGATTTCT 1569
||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||
Sbjct 1573 TCAGGTCTTACTTAGCCAGTGCCATCGGTATCGTGCTCTGGTGCTTCTTGGAAGATTTCT 1632
Query 1570 TGATATGGGTCCTTGGGCTGTCGATTTGGCCTTATCCGTTGGAATATATCCTTGCGTAGT 1629
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1633 TGATATGGGTCCTTGGGCTGTCGATTTGGCCTTATCTGTTGGAATATATCCTTGCGTAGT 1692
Query 1630 AAAGCTGCTGC-AGCAAACAACTATTGAGCTACGGCAGATTCTTGTTTTCATATGGACAA 1688
|||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1693 GAAGCTGCTGCAAAC-AACAACTATTGAGCTACGGCAGATTCTTGTTTTCATATGGACAA 1751
Query 1689 AGATTCTTGCATTTGATAAGTCATGTCAAGTAGATCTTGTGAAGGACCGGGGCCACATAT 1748
|||| || ||| |||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1752 AGATCCTAGCACTTGATAAGTCCTGTCAAGTTGATCTTGTGAAGGACCGGGGCCACATAT 1811
Query 1749 ATTTCATCCGATTTTTAGATAGTTCTGATGCATTCCCAGAACAACGTGCTATGGCTGTGT 1808
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1812 ATTTCATTCGATTTTTAGATAGTTCTGATGCATTCCCAGAACAACGTGCTATGGCTGCGT 1871
Query 1809 TTGTTTTGGCTGTTATTGTCGATGGCTACAAACAAGGCCAAGAATCTTGTCTTGAAGCTA 1868
|| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 1872 TTATTTTGGCTGTTATTGTCGATGGCTACAAACGAGGCCAAGAATCATGTCTTGAAGCTA 1931
Query 1869 ATTTAATTGGTGTTTGTCTGGGCCACCTCGAAGCAACCCAACCATGTGATCCACCGCCAG 1928
||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 1932 ATTTAATTGCTGTTTGTCTGGGGCACCTCGAAGCAACCCAACTATGTGATCCACCGCCAG 1991
Query 1929 AACCATTGTTTCTTCAATGGCTTTGTCTTTGTCTTGGAAAGTTGTGGGAGGACT-TTGTG 1987
||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1992 AACCATTGTTTCTACAATGGCTTTGTCTTTGTCTTGGAAAGTTGTGGGAGGACTATT-TG 2050
Query 1988 GAGGCCCAGATAATGGGTAAGGAGGCAAATGCTTCTGAGAA 2028
||||||||||||||||||| |||||||||||||||||||||
Sbjct 2051 GAGGCCCAGATAATGGGTAGGGAGGCAAATGCTTCTGAGAA 2091
Score = 267 bits (144), Expect = 9e-70
Identities = 161/169 (95%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 1247 ATGCGGGATGCATGGGACATGGCTGCTGAAATCTGCCTTTCTCAGCTTCCTAAACTTTTT 1306
||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1391 ATGTGGGATGCATGGGACATGGCTGCTGAAATCTGCCTTTCTCAGCTTCCTCAATTTTTT 1450
Query 1307 CTGGACCCAAATACGGAGTTTCAGCCAAGT-CTATTTTTTACTGAGCAACTGACAGCTTT 1365
|||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||
Sbjct 1451 CTGGACCCAAATACGGAGTTTCAGCCAAGTTC-ATTTTTCACTGAGCAACTGACAGCTTT 1509
Query 1366 TGAGGTCTGGCTTGATCATGGATCTGAGCATAAGAAGCCACCGGAGCAG 1414
|||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1510 TGAGGTCTGGCTGGATCATGGATCTGAGCATAAGAAGCCACCAGAGCAG 1558
> AT3G08850.1 | Symbols: RAPTOR1B, ATRAPTOR1B, RAPTOR1 | HEAT repeat
;WD domain, G-beta repeat protein protein | chr3:2686583-2695300
REVERSE LENGTH=4819
Length=4819
Score = 859 bits (465), Expect = 0.0
Identities = 831/1003 (83%), Gaps = 43/1003 (4%)
Strand=Plus/Plus
Query 279 CCGCCACAAGCATGGCATACTTGCCTCAGACTGTTGTGCTCTGCGACCTTAGACACGAGG 338
||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||||||| |
Sbjct 568 CCGCCACCAGCATGGCTTACTTGCCTCAGACTATTGTGCTCTGCGAGCTTAGACACGACG 627
Query 339 CCTCCGA-G-----G---CCTT--AGACATC---G-TCCG-A-T--CCCCCAGATGGCGC 379
| ||||| | | |||| ||| || | | || | | ||||| ||||||
Sbjct 628 CATCCGAGGCTTCTGCTCCCTTGGGGACTTCTGAGAT-CGTATTGGTCCCCAAATGGCGG 686
Query 380 CTTAAAGAGCGAATGAAAACAGGATGTGTAGCTCTAGTTATGTGTTTGCACATTAGTGTT 439
|||||||| |||||||||||||||||||||||| ||||| ||||||| |||||| ||||
Sbjct 687 CTTAAAGAACGAATGAAAACAGGATGTGTAGCTTTAGTTCTGTGTTTAAACATTACTGTT 746
Query 440 GATCCCCCTGATGTTATTAAGATCTCTCCATGCGCCACACTGGAATGC-TGGATAGATCC 498
||||| || |||||||| ||||| ||||| || || | | | | | || |||||||||||
Sbjct 747 GATCCGCCGGATGTTATAAAGATATCTCCTTGTGCTAGAATCG-AGGCATGGATAGATCC 805
Query 499 TTTTTCTAT--CTATCCACCAAGAAGAGCTCTTGAGACTATAGGCCAAAGCTTGAGCATT 556
|||||||| | | || || || |||||| ||||| || || ||| ||||||| |
Sbjct 806 ATTTTCTATGGC-A-CCGCC--TAA-AGCTCTCGAGACAATTGGAAAAAATTTGAGCACT 860
Query 557 CAGTACGAGAGATGGCTGCCTC-GGGCTCGATATAAGGTGGAACTGGATCCTACA-AAGG 614
||||| |||||||||| || | |||| || |||||||| | || ||||| ||| | |
Sbjct 861 CAGTATGAGAGATGGCAACC-CAGGGCCCGCTATAAGGTTCAGCTTGATCCGACAGTA-G 918
Query 615 ACGATGTCAGGAAGCTGTGCTTGTCTTGCCGGAAA-ACTGCTAAGACTGAGCGAGTTTTG 673
| || || ||||||||||||||| |||| |||||| | ||| ||||| ||| ||||| |
Sbjct 919 ATGAGGTGAGGAAGCTGTGCTTGACTTGTCGGAAATA-TGCAAAGACCGAGAGAGTTCTA 977
Query 674 TTTCATTATAACGGCCATGGTGTCCCCAAACCTACACCTAATGGTGAAATCTGGGT-TTA 732
|| |||||||| || |||||||| || ||||||||| ||||||||||||| ||||| ||
Sbjct 978 TTCCATTATAATGGGCATGGTGTGCCAAAACCTACAGCTAATGGTGAAATTTGGGTATT- 1036
Query 733 CAATAAGAATTTTACGCAGTACATTCCCTTGCCAGTCAGCCAACTTGATTCCTGGTTGAA 792
|| |||| || ||| |||||||||||||||||| |||| |||||||||||||||||||
Sbjct 1037 TAACAAGAGTTATACACAGTACATTCCCTTGCCAATCAGTGAACTTGATTCCTGGTTGAA 1096
Query 793 GACACCCGCAATTTATGTTTTTGACTGCTCTGCTGCTAGGCTCCTTGTCAATGCCTTCGC 852
||||||| | || |||||||| |||||||||||||||||| | || | |||||||| ||
Sbjct 1097 GACACCCTCCATCTATGTTTTCGACTGCTCTGCTGCTAGGATGATTCTGAATGCCTTTGC 1156
Query 853 TGAGCTTCATG-TTGGGGAATCTTCTGGCTCGTCTGGGCCCCCGAA-AGACTGCATTCTA 910
||||||||||| |||||| |||||||| || ||||| || | || ||||||||||||
Sbjct 1157 TGAGCTTCATGATTGGGG-TTCTTCTGGTTCCTCTGGATCCTC-AAGGGACTGCATTCTA 1214
Query 911 CTGGCTGCTTGTGATGTACATGAGACACTTCCTCAGAGTGTTGAATTTCCAGCTGACGTG 970
|| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct 1215 CTTGCTGCTTGTGATGTACATGAGACACTTCCTCAGAGCGTTGAGTTTCCAGCTGATGTT 1274
Query 971 TTTACTTCTTGCCTTACCACACCTATTAAGATCGCATTGAAATGGTTCTGCAGACGTTCT 1030
||||| |||||||| || || || ||||| || || ||||||||||||||||| |||||
Sbjct 1275 TTTACGTCTTGCCTGACAACGCCCATTAAAATGGCGTTGAAATGGTTCTGCAGGCGTTCG 1334
Query 1031 CTTCTGAAGGAATTTATAGATGAATCACTTATTGATAGAATTCCCGGCCGCCAAAATGAC 1090
|||||||| ||| |||| |||||||||||||| || || ||||| ||||| ||||| ||
Sbjct 1335 CTTCTGAAAGAAATTATCGATGAATCACTTATCGACAGGATTCCAGGCCGGCAAAACGAT 1394
Query 1091 CGCAAAACATTGTTAGGAGAGTTGAACTGGATCTTT-ACTGCAGTCACGGACACCATTGC 1149
|| || ||||||||||| |||||||||||||| ||| || ||||| ||||| || |||||
Sbjct 1395 CGTAAGACATTGTTAGGGGAGTTGAACTGGAT-TTTCACAGCAGTGACGGATACAATTGC 1453
Query 1150 CTGGAATGTGCTTCCTCGCGAACTTTTCCAGAGATTATTCAGACAGGACTTGTTGGTTGC 1209
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1454 TTGGAATGTGCTTCCTCATGAACTTTTCCAGAGATTATTCAGACAGGACTTGTTGGTCGC 1513
Query 1210 TAGCCTTTTCCGGAATTTCTTACTTGCTGAGAGGATAATGCGG 1252
||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1514 TAGCCTTTTCCGGAATTTCTTACTTGCTGAGAGAATAATGCGG 1556
Score = 621 bits (336), Expect = 2e-176
Identities = 548/650 (84%), Gaps = 16/650 (2%)
Strand=Plus/Plus
Query 2029 GGCTGCTGCTGTTTTTGCCTTGGGTACCTTACTTGATGTTGGGTTTGACTCTGGTAAAGG 2088
||||||||| ||||||||| |||||||||| |||||| |||||||||||||| |||| |
Sbjct 2354 GGCTGCTGCAGTTTTTGCCCTGGGTACCTTGCTTGATATTGGGTTTGACTCTAATAAAAG 2413
Query 2089 TGTTCGT-GACGAAGAATTTGATGATGATGAAAATATTATAATTGAAGATATTATGATAA 2147
|| | || || || |||||||||||||||||||| |||| | ||||| ||| || |
Sbjct 2414 TG-TGGTGGAGGATGAATTTGATGATGATGAAAAGATTAGAGCCGAAGACGCTATCATTA 2472
Query 2148 AAAGTCTCTTAGATGTAGTTTCAGATGGGAGCCCGCTTGTCCGAGCAGAAGTTGCTGTAG 2207
||||||||||||||||||||||||||||||| || |||||||||||||| ||||| ||||
Sbjct 2473 AAAGTCTCTTAGATGTAGTTTCAGATGGGAGTCCACTTGTCCGAGCAGAGGTTGCCGTAG 2532
Query 2208 CTCTCGCACGGTTTGCCTTTGGACACAAACAACATCTAAAGTCAGTTGCAGCTTCATATT 2267
|||| ||||| ||||||||||| |||||||| || || |||| || |||||||||||||
Sbjct 2533 CTCTTGCACGTTTTGCCTTTGGCCACAAACAGCACCTTAAGTTAGCCGCAGCTTCATATT 2592
Query 2268 GGAAGCCCCA---AAGTTCTCTGCGAACTTCTTTCCCTTCAATGGCCAAGTTTCACGA-C 2323
||||||| || ||||||| ||| |||||| | |||||||| || || || || || |
Sbjct 2593 GGAAGCCTCAGTCAAGTTCTTTGCTTACTTCTCTACCTTCAATAGCTAAATTCCATGATC 2652
Query 2324 GCTGGAACTTCAACAATTGTTTCTTCACACATGGGTTCTCTGACTAGAGCTAGCCCTGAT 2383
|||| | | ||||||||||||||| ||||||| || ||||||||||||||||| | |||
Sbjct 2653 -CTGGGAGTGCAACAATTGTTTCTTTACACATGAGTCCTCTGACTAGAGCTAGCACGGAT 2711
Query 2384 AGCCAACCAGTGGCTCGTGAAG-GGAGGATCTCAAGCAG-CCTCCATGAAGCTTCTTCCG 2441
||||||||||||||||||| || |||||||||||||| ||| | || || || || |
Sbjct 2712 AGCCAACCAGTGGCTCGTG-AGTCTAGGATCTCAAGCAGCCCT-CTTG--GC-TCCTCTG 2766
Query 2442 GGCCAATGCAAGGATCTCCATTATCTGATGATTCTTCCTTGCATTCTGATTCTGGAATCA 2501
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| |
Sbjct 2767 GGCTGATGCAAGGATCTCCATTATCTGATGATTCTTCGTTACATTCTGATTCTGGAATGA 2826
Query 2502 TCCATGATGGTGTCAACAATGGAGTTGTCCATCAGCCAAGACCGCTGGATAATGCTATCT 2561
| ||||| |||||| |||||||| |||||||||||||||| | ||||||||||| | |
Sbjct 2827 TGCATGACAGTGTCAGCAATGGAGCGGTCCATCAGCCAAGACTGTTGGATAATGCTGTTT 2886
Query 2562 ATTCGCAGTGTGTTCTG-GCTATGTTTACGTTAGCTAAAGATCCATCTCCACGTATTGCA 2620
|||||||||| || | | ||||||||| | ||||||||||||||||||||||||||||||
Sbjct 2887 ATTCGCAGTGCGTCC-GAGCTATGTTTGCATTAGCTAAAGATCCATCTCCACGTATTGCA 2945
Query 2621 AGCCTTGGGCGGCGTGTGCTATCTGTTCTTGGGATTGAACAAATTGTTGC 2670
|| || || ||||||||||| ||| || |||| || ||||| |||||||
Sbjct 2946 AGTCTCGGACGGCGTGTGCTTTCTATTATTGGAATCGAACAGGTTGTTGC 2995
Score = 534 bits (289), Expect = 2e-150
Identities = 451/528 (85%), Gaps = 16/528 (3%)
Strand=Plus/Plus
Query 1510 TCAGGTCTTACTTAGCCAGTGCCATCGGTTTCGTGCTCTTGTACTTCTTGGACGATTTCT 1569
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1796 TCAGGTGTTACTTAGCCAGTGCCATCGGTTTCGTGCTCTTGTACTTCTTGGAAGATTTCT 1855
Query 1570 TGATATGGGTCCTTGGGCTGTCGATTTGGCCTTATCCGTTGGAATATATCCT-TGCGTAG 1628
|||||||||| | |||||||| ||| ||||||| || |||||||||| ||| | || |
Sbjct 1856 TGATATGGGTTCATGGGCTGTGGATCTGGCCTTGTCTGTTGGAATAT-TCCCATATGT-G 1913
Query 1629 -TAAAGCTGCTGCAG-CAAACAACTATTGAGCTACGGCAGATTCTTGTTTTCATATGGAC 1686
| ||||| ||||| ||| |||| | ||||||| | ||||| || ||||||||||||||
Sbjct 1914 CTGAAGCTTCTGCAAACAA-CAACGAATGAGCTAAGACAGATCCTGGTTTTCATATGGAC 1972
Query 1687 AAAGATTCTTGCATTTGATAAGTCATGTCAAGTAGATCTTGTGAAGGACCGGGGCCACAT 1746
||| ||||||||| |||| |||||||||||| | |||||||||||||| |||| || |
Sbjct 1973 AAAAATTCTTGCACTTGACAAGTCATGTCAAATTGATCTTGTGAAGGATGGGGGGCATAC 2032
Query 1747 ATATTTCATCCGATTTTTAGATAGTTCTGATGCATTCCCAGAACAACGTGCTATGGCTG- 1805
||| ||||| |||||| ||||||| || | |||||| ||||||||||| ||||||||||
Sbjct 2033 ATACTTCATACGATTTCTAGATAGCTCGGGTGCATTTCCAGAACAACGAGCTATGGCTGC 2092
Query 1806 TGTTTGTTTTGGCTGTTATTGTCGATGG-C-TACAAACAAGGCCAAGAATCTTGTCTTGA 1863
| |||||| ||||||| ||||| ||||| | | | | | |||||| ||| | ||||||||
Sbjct 2093 T-TTTGTTCTGGCTGTCATTGTGGATGGACAT-CGA-CGAGGCCAGGAAGCATGTCTTGA 2149
Query 1864 AGCTAATTTAATTGGTGTTTGTCT-GGGCCACCTCGAAGCAACCCA-ACCATGTGATCCA 1921
|||||||||||||||||||||||| |||| |||| |||||| || | |||| ||||||||
Sbjct 2150 AGCTAATTTAATTGGTGTTTGTCTCGGGC-ACCTTGAAGCATCC-AGACCAAGTGATCCA 2207
Query 1922 CCGCCAGAACCATTGTTTCTTCAATGGCTTTGTCTTTGTCTTGGAAAGTTGTGGGAGGAC 1981
| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct 2208 CAACCAGAACCATTGTTTCTACAATGGCTTTGTCTTTGTCTTGGAAAGTTATGGGAAGAT 2267
Query 1982 TTTGTGGAGGCCCAGATAATGGGTAAGGAGGCAAATGCTTCTGAGAAG 2029
||| |||||||||| |||||||| | |||||||||||||| ||| |||
Sbjct 2268 TTTATGGAGGCCCAAATAATGGGCAGGGAGGCAAATGCTTTTGAAAAG 2315
Score = 244 bits (132), Expect = 4e-63
Identities = 156/168 (93%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 1247 ATGCGGGATGCATGGGACATGGCTGCTGAAATCTGCCTTTCTCAGCTTCCTAAACTTTTT 1306
||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct 1614 ATGTGGGATGCATGGGACATGGCTGCTGAAATCTGTCTTTCTCAGCTTCCCCAACTTGTT 1673
Query 1307 CTGGACCCAAATACGGAGTTTCAGCCAAGTCTATTTTTTACTGAGCAACTGACAGCTTTT 1366
|||||||||| || ||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 1674 CTGGACCCAAGCACAGAGTTCCAGCCAAGTCCGTTTTTTACTGAGCAACTGACAGCTTTT 1733
Query 1367 GAGGTCTGGCTTGATCATGGATCTGAGCATAAGAAGCCACCGGAGCAG 1414
||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1734 GAGGTGTGGCTTGATCATGGATCTGAGCATAAGAAGCCACCGGAGCAG 1781
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 214313180496
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5