BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486898
Length=2113
Score E
Sequences producing significant alignments: (Bits) Value
AT5G01712.1 | Symbols: CPuORF48 | conserved peptide upstream op... 3011 0.0
AT5G01710.1 | Symbols: | methyltransferases | chr5:263511-2656... 3011 0.0
> AT5G01712.1 | Symbols: CPuORF48 | conserved peptide upstream
open reading frame 48 | chr5:263511-265633 REVERSE LENGTH=2123
Length=2123
Score = 3011 bits (1630), Expect = 0.0
Identities = 1974/2136 (92%), Gaps = 39/2136 (2%)
Strand=Plus/Plus
Query 1 TTTTCCGATTCCCCTCTATCTCTCTTTCTTCTTCAtttttttGCTCACTCCAGATTCCAT 60
|||||||||||| ||| ||||||||||||||||| ||||| | ||| ||||| |||||||
Sbjct 4 TTTTCCGATTCCTCTCAATCTCTCTTTCTTCTTC-TTTTTCT-CTCGCTCCAAATTCCAT 61
Query 61 GTCTCTATCTC-TT--TCCTCCGCCGTAT-AGCCGCCGGAAAAA--CTC-CCCTTGtttt 113
|||| | |||| || ||||||||||||| | ||||||||||| || ||| | ||
Sbjct 62 GTCTGTGTCTCTTTCCTCCTCCGCCGTATAATTCGCCGGAAAAATTATCTCCC-T-TTGA 119
Query 114 ttttCCGAAAACCGT-GGCGAACTATGCGCTTCTTTTGCCGTTATCCTCCAACTACTTGT 172
|||| |||| ||| | ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 120 TTTT-CGAACACC-TCCGCGAACTATGCGCTTCTTTTGCCCTTATCCTCCAACTACTTGT 177
Query 173 CCGATCTGCAATTCGTATTGTCTATTCCCAACCCTAATCGGAGCTAATCACACCTCTGCT 232
| |||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 178 CGGATCTGCAATTCTTCTTGTCAATTCCCAACCCTAATCGGAGCTAATCACACCTCTGCT 237
Query 233 AGGTTCTCTTCTCGTTAGTCTTTGTTCCA---CCTCCTCAGATTTAGGGTTGATTTAAGT 289
| |||||||||||||||||| || |||| ||||||||||||||||| | |||| |
Sbjct 238 CGTTTCTCTTCTCGTTAGTCTCTGCTCCATCTCCTCCTCAGATTTAGGGAT-ATTTGCTT 296
Query 290 CTAA-GAAACAAACCTACCGAGAGCTATTCTTTCGTTCTTTATTCTCTCTGTCTTGTAAA 348
| || ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 297 CCAATTTAACAAACAAACCAAGAGCTATTCTTTCGTTCTTTATTCTCTCCGTCTTGTAAA 356
Query 349 GCAGTTTTAGCAGTGAGATACATATATACAATGGAGACTTCCATGGGGAAACCCAGCTTC 408
| ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||
Sbjct 357 GTAGTTTTAGCAGTGAGATAC--ATACA-AATGGAGACTTCCATGGGGAAACCCAGCTTC 413
Query 409 TTGCGGAATATTATGGTTCGCGTGCTTCTCTTTGGTGTTCTTATCATCGTTGTCAGATTT 468
|| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 414 TTACGGAATATAATGGTTCGCGTGCTTCTCTTTGGTGTTCTTATCATCGTTGTGAGATTT 473
Query 469 GCTTATGTTGTCACCATCACCGGTGAATCATGCAATCGCGGCGACTTCTGCTTCTTCTCT 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 474 GCTTATGTTGTCACCATCACCGGTGAATCATGCAATCGCGGCGACTTCTGCTTCTTCTCT 533
Query 529 CTCCCTGAGAATCTCAACTTTGTCATCTCCGGTCCTGGCTCCGGCGCTTCTGCTATCGAC 588
||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct 534 CTCCCTGAGAATCTCAACTTTGTCATCTCCGGTGCTGCCTCCGGCTCTTCTGCTATCGAC 593
Query 589 GCCATCAGATCTACTTCTCCAGGCGATGATCTGTATACCAGCAGGGATTGGATCAAAGCC 648
||||||||||||||||| || || |||||||| || |||| |||||||||||||||| ||
Sbjct 594 GCCATCAGATCTACTTCCCCTGGGGATGATCTCTACACCACCAGGGATTGGATCAAATCC 653
Query 649 GTTCAGTTTTACTCCTCCATCTTTCAGGATCTGATCGCCGACGGTTATCTCTCCCCGGAA 708
||||||||||||||||||||||| |||||||||||||||||||||||||| || || |||
Sbjct 654 GTTCAGTTTTACTCCTCCATCTTCCAGGATCTGATCGCCGACGGTTATCTATCGCCTGAA 713
Query 709 TCGAAGACGCTTTGTGTGGAAACGGCGATTGGACAAGAGGTTCACTCACTCAGAGAGATT 768
||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||
Sbjct 714 TCGAAGACGCTTTGTGTAGAGACGGCGATTGGACAAGAGGTTCACTCGCTCAGAGAGATT 773
Query 769 GGGGTCAAGAACTCCGTCGGGATCTCTAAGAAGGCTTTTAGGCCGTTGGTGGTCAGAGGC 828
||||| |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||
Sbjct 774 GGGGTGAAGAACTCCGTCGGGATCTCTAAGAAAGCTTCTAGGCCGTTGGTGGTTAGAGGC 833
Query 829 GAGGGACATGCTATTCCCTTCGAGGATAACGCTTTCGATTTTGTCTTCTCCGGTGGTGGT 888
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 834 GAGGGACATGCTATTCCCTTTGAGGATAACGCTTTCGATTTTGTATTCTCCGGTGGTGAC 893
Query 889 CGCCTCGGGAAGTCGTTGAAGCAGTTGGAATTCGCCGACGAGATTACTCGAACACTGAAA 948
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 894 CGCCTTGGGAAGTCGTTGAAGCAGTTGGAATTCGCCGATGAGATTACTCGAACACTGAAA 953
Query 949 CCCCAAGGGTTTGCGGTGGTTCATGTTGGGGCTACAGATACGTACAGTTTCAATTCATTC 1008
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 CCCGAAGGGTTTGCGGTGGTTCATGTTGGGGCTACAGATACGTACAGTTTCAATTCATTC 1013
Query 1009 CTTGATTTGTTTAATTCTTGCAGATTGGTGAAGATGCGTGATATTGATGGTTTTGATTCT 1068
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 1014 CTTGATTTGTTTAATTCTTGCAGATTGGTGAAGATGCGTGATATCGATGGTTTTGATCCT 1073
Query 1069 TCAATGCCTCATATCAGAGAATTCGTTATTCAAAAATACTCAGATATTGATGGTCAT--- 1125
|| |||||||||||||||||||| |||||||| ||||||||||| ||||||||| |
Sbjct 1074 TCGATGCCTCATATCAGAGAATTTGTTATTCAGAAATACTCAGAGATTGATGGTGGTGGT 1133
Query 1126 CATCACCGGAAGAATTCCGGTGATGATTCTGGTGGAAAGTGCTGGATTCCCGGTTACAAA 1185
||||||| | | |||| ||||||||||||||||||||||||||| |||||||||
Sbjct 1134 CATCACCACC-GTGGT--GGTGGTGATTCTGGTGGAAAGTGCTGGATTCCGGGTTACAAA 1190
Query 1186 AGAGATTTGATTCGGGATGCAGAGCCACTGATTCAAGAGGAGCCTCTTAAGCCATGGATT 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1191 AGAGATTTGATTCGGGATGCAGAGCCACTGATTCAAGAGGAGCCTCTTAAGCCATGGATT 1250
Query 1246 ACCCTTAAGAGGAACATTAAGAATATTAAATATGTGCCTTCTATGGTAGATATACGTTTC 1305
|| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1251 ACACTTAAGAGGAACATCAAGAATATTAAATATGTGCCTTCTATGGTTGATATACGTTTC 1310
Query 1306 AAGAGTAGATATGTATACGTTGATGTTGGTTCTCGAAGTTACGGGTCCAGTATTGGGAGT 1365
||||||||||| || ||||||||||||||| || ||||||| || |||||||||||||||
Sbjct 1311 AAGAGTAGATACGTTTACGTTGATGTTGGTGCTAGAAGTTATGGATCCAGTATTGGGAGT 1370
Query 1366 TGGTTCAAGAAAGAGTACCCTAAGCAGAACAAAACTTTCGATGTTTTCGCCATTGAGGCC 1425
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1371 TGGTTCAAGAAAGAGTACCCTAAGCAGAACAAAACTTTTGATGTTTTCGCCATTGAGGCT 1430
Query 1426 GACAAAGCCTTTCATGAAGAGTATAAGATTAAGAAAAAGGTGAACCTATTGCCATACGCA 1485
|||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct 1431 GACAAAGCCTTTCACGAAGAGTATAAGATAAAGAAGAAGGTGAACCTGTTGCCATACGCA 1490
Query 1486 GCATGGGTGAGGAACGAGACATTATCATTTGAGATAAATCACGATCCGGGAAAGGAAGCG 1545
|| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||| |
Sbjct 1491 GCGTGGGTGAGGAACGAGACGTTATCGTTTGAGATCAATCACGATCCGGGAAAGGAAGTG 1550
Query 1546 GAAGCCAAAGCAAAGGGCAGGGGAATGGGCAGAATCCAGCCGGTTAAAAAGTCTTCCTCC 1605
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 1551 GAAGCCAAAGCAAAGGGCAGGGGGATGGGCAGAATCCAGCCGGTTAAAAAGTCTGACTCG 1610
Query 1606 AGTGACTTAGCTGGAGAGGTCAATTTGATTCAAGGGTTTGATTTCGCTGACTGGTTGAAG 1665
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1611 AGTGACTTAGCTGGAGAGGTGAATTTGATTCAAGGGTTTGATTTCGCTGACTGGTTGAAG 1670
Query 1666 AAGAGTGTGAGGGAGAGGGACTTTGTTGTGATGAAGATGGATGTGGAAGGAACCGAATTC 1725
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1671 AAGAGTGTGAGAGAGAGGGACTTTGTTGTGATGAAGATGGATGTTGAAGGAACCGAATTC 1730
Query 1726 GATCTGATCCCGAGGCTAATCAAGACAGGAGCGATTTGTCTAATCGACGAGTTGTTCCTT 1785
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1731 GATCTGATCCCGAGGCTAATCAAGACAGGAGCGATTTGTCTAATAGATGAGTTGTTCCTT 1790
Query 1786 GAATGCCATTACAACAGGTGGCAGAGATGTTGTCCTGGTCAAAGGAGCCAAAAGTACAAC 1845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1791 GAATGCCATTACAACAGGTGGCAGAGATGTTGTCCTGGTCAAAGGAGCCAAAAGTACAAC 1850
Query 1846 AAGACTTATAACCAATGCTTAGAGCTCTTCACTTCGCTCAGACAAAGAGGGGTGCTTGTC 1905
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1851 AAGACTTATAACCAATGCTTAGAGCTCTTCAATTCGCTCAGACAAAGAGGGGTGCTTGTC 1910
Query 1906 CATCAGTGGTGGTAATGGTTAGGATGCTGCATAA---TCTCcttcttcttcttcttcttc 1962
||||| |||||||||||||||||||||||||||| |||||||||||| | | | ||
Sbjct 1911 CATCAATGGTGGTAATGGTTAGGATGCTGCATAAAAGTCTCCTTCTTCTA-TGCAT-TTG 1968
Query 1963 tatgcaaaatgtactttcttcttctAGAATATA-AAA-CGG-ATATTGTAGGTTTCTATT 2019
|| |||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||
Sbjct 1969 G-TGAAAAATGTACTTTCTTCTTCTAGAATATATAAAGCGGGATATTGTAGGTTTCTATT 2027
Query 2020 AAAAATACGTTGTCTATGCTGAAATTCCCTTT-ACTGTAAGAAAAAAGAAGTTTAGCTTG 2078
||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2028 AAAAATACGTTGTCTGTGCTGAAATTCCCTTTTACTGTAAGAAAAAAGAAGTTTAGCTTT 2087
Query 2079 AAATG-AAATTTGAGTTTCTTTTACTCTCGCAACTG 2113
||||| ||||||||||||||||||| ||||||||||
Sbjct 2088 AAATGGAAATTTGAGTTTCTTTTACGCTCGCAACTG 2123
> AT5G01710.1 | Symbols: | methyltransferases | chr5:263511-265633
REVERSE LENGTH=2123
Length=2123
Score = 3011 bits (1630), Expect = 0.0
Identities = 1974/2136 (92%), Gaps = 39/2136 (2%)
Strand=Plus/Plus
Query 1 TTTTCCGATTCCCCTCTATCTCTCTTTCTTCTTCAtttttttGCTCACTCCAGATTCCAT 60
|||||||||||| ||| ||||||||||||||||| ||||| | ||| ||||| |||||||
Sbjct 4 TTTTCCGATTCCTCTCAATCTCTCTTTCTTCTTC-TTTTTCT-CTCGCTCCAAATTCCAT 61
Query 61 GTCTCTATCTC-TT--TCCTCCGCCGTAT-AGCCGCCGGAAAAA--CTC-CCCTTGtttt 113
|||| | |||| || ||||||||||||| | ||||||||||| || ||| | ||
Sbjct 62 GTCTGTGTCTCTTTCCTCCTCCGCCGTATAATTCGCCGGAAAAATTATCTCCC-T-TTGA 119
Query 114 ttttCCGAAAACCGT-GGCGAACTATGCGCTTCTTTTGCCGTTATCCTCCAACTACTTGT 172
|||| |||| ||| | ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 120 TTTT-CGAACACC-TCCGCGAACTATGCGCTTCTTTTGCCCTTATCCTCCAACTACTTGT 177
Query 173 CCGATCTGCAATTCGTATTGTCTATTCCCAACCCTAATCGGAGCTAATCACACCTCTGCT 232
| |||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 178 CGGATCTGCAATTCTTCTTGTCAATTCCCAACCCTAATCGGAGCTAATCACACCTCTGCT 237
Query 233 AGGTTCTCTTCTCGTTAGTCTTTGTTCCA---CCTCCTCAGATTTAGGGTTGATTTAAGT 289
| |||||||||||||||||| || |||| ||||||||||||||||| | |||| |
Sbjct 238 CGTTTCTCTTCTCGTTAGTCTCTGCTCCATCTCCTCCTCAGATTTAGGGAT-ATTTGCTT 296
Query 290 CTAA-GAAACAAACCTACCGAGAGCTATTCTTTCGTTCTTTATTCTCTCTGTCTTGTAAA 348
| || ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 297 CCAATTTAACAAACAAACCAAGAGCTATTCTTTCGTTCTTTATTCTCTCCGTCTTGTAAA 356
Query 349 GCAGTTTTAGCAGTGAGATACATATATACAATGGAGACTTCCATGGGGAAACCCAGCTTC 408
| ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||
Sbjct 357 GTAGTTTTAGCAGTGAGATAC--ATACA-AATGGAGACTTCCATGGGGAAACCCAGCTTC 413
Query 409 TTGCGGAATATTATGGTTCGCGTGCTTCTCTTTGGTGTTCTTATCATCGTTGTCAGATTT 468
|| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 414 TTACGGAATATAATGGTTCGCGTGCTTCTCTTTGGTGTTCTTATCATCGTTGTGAGATTT 473
Query 469 GCTTATGTTGTCACCATCACCGGTGAATCATGCAATCGCGGCGACTTCTGCTTCTTCTCT 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 474 GCTTATGTTGTCACCATCACCGGTGAATCATGCAATCGCGGCGACTTCTGCTTCTTCTCT 533
Query 529 CTCCCTGAGAATCTCAACTTTGTCATCTCCGGTCCTGGCTCCGGCGCTTCTGCTATCGAC 588
||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct 534 CTCCCTGAGAATCTCAACTTTGTCATCTCCGGTGCTGCCTCCGGCTCTTCTGCTATCGAC 593
Query 589 GCCATCAGATCTACTTCTCCAGGCGATGATCTGTATACCAGCAGGGATTGGATCAAAGCC 648
||||||||||||||||| || || |||||||| || |||| |||||||||||||||| ||
Sbjct 594 GCCATCAGATCTACTTCCCCTGGGGATGATCTCTACACCACCAGGGATTGGATCAAATCC 653
Query 649 GTTCAGTTTTACTCCTCCATCTTTCAGGATCTGATCGCCGACGGTTATCTCTCCCCGGAA 708
||||||||||||||||||||||| |||||||||||||||||||||||||| || || |||
Sbjct 654 GTTCAGTTTTACTCCTCCATCTTCCAGGATCTGATCGCCGACGGTTATCTATCGCCTGAA 713
Query 709 TCGAAGACGCTTTGTGTGGAAACGGCGATTGGACAAGAGGTTCACTCACTCAGAGAGATT 768
||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||
Sbjct 714 TCGAAGACGCTTTGTGTAGAGACGGCGATTGGACAAGAGGTTCACTCGCTCAGAGAGATT 773
Query 769 GGGGTCAAGAACTCCGTCGGGATCTCTAAGAAGGCTTTTAGGCCGTTGGTGGTCAGAGGC 828
||||| |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||
Sbjct 774 GGGGTGAAGAACTCCGTCGGGATCTCTAAGAAAGCTTCTAGGCCGTTGGTGGTTAGAGGC 833
Query 829 GAGGGACATGCTATTCCCTTCGAGGATAACGCTTTCGATTTTGTCTTCTCCGGTGGTGGT 888
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 834 GAGGGACATGCTATTCCCTTTGAGGATAACGCTTTCGATTTTGTATTCTCCGGTGGTGAC 893
Query 889 CGCCTCGGGAAGTCGTTGAAGCAGTTGGAATTCGCCGACGAGATTACTCGAACACTGAAA 948
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 894 CGCCTTGGGAAGTCGTTGAAGCAGTTGGAATTCGCCGATGAGATTACTCGAACACTGAAA 953
Query 949 CCCCAAGGGTTTGCGGTGGTTCATGTTGGGGCTACAGATACGTACAGTTTCAATTCATTC 1008
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 CCCGAAGGGTTTGCGGTGGTTCATGTTGGGGCTACAGATACGTACAGTTTCAATTCATTC 1013
Query 1009 CTTGATTTGTTTAATTCTTGCAGATTGGTGAAGATGCGTGATATTGATGGTTTTGATTCT 1068
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 1014 CTTGATTTGTTTAATTCTTGCAGATTGGTGAAGATGCGTGATATCGATGGTTTTGATCCT 1073
Query 1069 TCAATGCCTCATATCAGAGAATTCGTTATTCAAAAATACTCAGATATTGATGGTCAT--- 1125
|| |||||||||||||||||||| |||||||| ||||||||||| ||||||||| |
Sbjct 1074 TCGATGCCTCATATCAGAGAATTTGTTATTCAGAAATACTCAGAGATTGATGGTGGTGGT 1133
Query 1126 CATCACCGGAAGAATTCCGGTGATGATTCTGGTGGAAAGTGCTGGATTCCCGGTTACAAA 1185
||||||| | | |||| ||||||||||||||||||||||||||| |||||||||
Sbjct 1134 CATCACCACC-GTGGT--GGTGGTGATTCTGGTGGAAAGTGCTGGATTCCGGGTTACAAA 1190
Query 1186 AGAGATTTGATTCGGGATGCAGAGCCACTGATTCAAGAGGAGCCTCTTAAGCCATGGATT 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1191 AGAGATTTGATTCGGGATGCAGAGCCACTGATTCAAGAGGAGCCTCTTAAGCCATGGATT 1250
Query 1246 ACCCTTAAGAGGAACATTAAGAATATTAAATATGTGCCTTCTATGGTAGATATACGTTTC 1305
|| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1251 ACACTTAAGAGGAACATCAAGAATATTAAATATGTGCCTTCTATGGTTGATATACGTTTC 1310
Query 1306 AAGAGTAGATATGTATACGTTGATGTTGGTTCTCGAAGTTACGGGTCCAGTATTGGGAGT 1365
||||||||||| || ||||||||||||||| || ||||||| || |||||||||||||||
Sbjct 1311 AAGAGTAGATACGTTTACGTTGATGTTGGTGCTAGAAGTTATGGATCCAGTATTGGGAGT 1370
Query 1366 TGGTTCAAGAAAGAGTACCCTAAGCAGAACAAAACTTTCGATGTTTTCGCCATTGAGGCC 1425
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1371 TGGTTCAAGAAAGAGTACCCTAAGCAGAACAAAACTTTTGATGTTTTCGCCATTGAGGCT 1430
Query 1426 GACAAAGCCTTTCATGAAGAGTATAAGATTAAGAAAAAGGTGAACCTATTGCCATACGCA 1485
|||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct 1431 GACAAAGCCTTTCACGAAGAGTATAAGATAAAGAAGAAGGTGAACCTGTTGCCATACGCA 1490
Query 1486 GCATGGGTGAGGAACGAGACATTATCATTTGAGATAAATCACGATCCGGGAAAGGAAGCG 1545
|| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||| |
Sbjct 1491 GCGTGGGTGAGGAACGAGACGTTATCGTTTGAGATCAATCACGATCCGGGAAAGGAAGTG 1550
Query 1546 GAAGCCAAAGCAAAGGGCAGGGGAATGGGCAGAATCCAGCCGGTTAAAAAGTCTTCCTCC 1605
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 1551 GAAGCCAAAGCAAAGGGCAGGGGGATGGGCAGAATCCAGCCGGTTAAAAAGTCTGACTCG 1610
Query 1606 AGTGACTTAGCTGGAGAGGTCAATTTGATTCAAGGGTTTGATTTCGCTGACTGGTTGAAG 1665
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1611 AGTGACTTAGCTGGAGAGGTGAATTTGATTCAAGGGTTTGATTTCGCTGACTGGTTGAAG 1670
Query 1666 AAGAGTGTGAGGGAGAGGGACTTTGTTGTGATGAAGATGGATGTGGAAGGAACCGAATTC 1725
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1671 AAGAGTGTGAGAGAGAGGGACTTTGTTGTGATGAAGATGGATGTTGAAGGAACCGAATTC 1730
Query 1726 GATCTGATCCCGAGGCTAATCAAGACAGGAGCGATTTGTCTAATCGACGAGTTGTTCCTT 1785
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1731 GATCTGATCCCGAGGCTAATCAAGACAGGAGCGATTTGTCTAATAGATGAGTTGTTCCTT 1790
Query 1786 GAATGCCATTACAACAGGTGGCAGAGATGTTGTCCTGGTCAAAGGAGCCAAAAGTACAAC 1845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1791 GAATGCCATTACAACAGGTGGCAGAGATGTTGTCCTGGTCAAAGGAGCCAAAAGTACAAC 1850
Query 1846 AAGACTTATAACCAATGCTTAGAGCTCTTCACTTCGCTCAGACAAAGAGGGGTGCTTGTC 1905
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1851 AAGACTTATAACCAATGCTTAGAGCTCTTCAATTCGCTCAGACAAAGAGGGGTGCTTGTC 1910
Query 1906 CATCAGTGGTGGTAATGGTTAGGATGCTGCATAA---TCTCcttcttcttcttcttcttc 1962
||||| |||||||||||||||||||||||||||| |||||||||||| | | | ||
Sbjct 1911 CATCAATGGTGGTAATGGTTAGGATGCTGCATAAAAGTCTCCTTCTTCTA-TGCAT-TTG 1968
Query 1963 tatgcaaaatgtactttcttcttctAGAATATA-AAA-CGG-ATATTGTAGGTTTCTATT 2019
|| |||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||
Sbjct 1969 G-TGAAAAATGTACTTTCTTCTTCTAGAATATATAAAGCGGGATATTGTAGGTTTCTATT 2027
Query 2020 AAAAATACGTTGTCTATGCTGAAATTCCCTTT-ACTGTAAGAAAAAAGAAGTTTAGCTTG 2078
||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2028 AAAAATACGTTGTCTGTGCTGAAATTCCCTTTTACTGTAAGAAAAAAGAAGTTTAGCTTT 2087
Query 2079 AAATG-AAATTTGAGTTTCTTTTACTCTCGCAACTG 2113
||||| ||||||||||||||||||| ||||||||||
Sbjct 2088 AAATGGAAATTTGAGTTTCTTTTACGCTCGCAACTG 2123
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104768537415
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5