BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486918 Length=432 Score E Sequences producing significant alignments: (Bits) Value AT5G01570.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 438 2e-122 > AT5G01570.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G08880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:221367-222836 FORWARD LENGTH=644 Length=644 Score = 438 bits (237), Expect = 2e-122 Identities = 274/292 (94%), Gaps = 2/292 (1%) Strand=Plus/Plus Query 1 ATGGGAGATCAGTTGAGGAATTTCGAAATGGCGATATCATGGGGAGACGAATTGATCCAT 60 ||| ||||||||| ||||||||||||||||| || ||||||||||| |||||||||||| Sbjct 1 ATGAGAGATCAGTCGAGGAATTTCGAAATGGTAATTTCATGGGGAGATGAATTGATCCAT 60 Query 61 GTTTTGGATGATAGGAAAGGATTTGGTGTGTTGGTACAAACTCTCGAGCAACTGAGAGCT 120 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 61 GTTTTGGATGATAGGAAAGGATTTGACGTGTTGGTACAAACTCTCGAGCAACTGAGAGCT 120 Query 121 A-TCCAATTCTCCTGCGACGACGATTTTAGCGAGATACATGAATCTCTCCAAGATTTGCA 179 | ||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct 121 ATTCC-ATTCTCCTGCGACGAAGATTTTAAAGAGATACATGAATCTCTCCAAGATTTGCA 179 Query 180 GAAGAAACTCGATGTTTGCAAGGAGAAGACTGATGAGGCAAATTCAGAGATTGCTGATGA 239 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 180 GAAGAAACTCGATGTTTGCAAGGAGAAGACAGATGAGGCAAATTCAGAGATTGCGGATGA 239 Query 240 AGAAGAAACTGAGCGTCTTCATAAAGAGCTTGATGAAGAGCTAGAACTGGAG 291 |||||||| |||||||||||| |||||||||||||||||||||||||| ||| Sbjct 240 AGAAGAAATTGAGCGTCTTCAGAAAGAGCTTGATGAAGAGCTAGAACTAGAG 291 Score = 150 bits (81), Expect = 9e-36 Identities = 97/105 (92%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 291 GAATAAGCAGGAACAGTTGAGAACCGAGAAAAAGCTTTCTATGTATGTTTCTGTCACTAG 350 ||| |||| ||| |||||||||||||||| ||||||| ||||||||| |||||||||| | Sbjct 357 GAACAAGCGGGACCAGTTGAGAACCGAGACAAAGCTTCCTATGTATGCTTCTGTCACTCG 416 Query 351 AGTTATACCAAACATTGATGATTCATTGAAGACCTCAGGCTGTAT 395 ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 417 AGTTATACCAAACATTGATGATTCATTGAAGACCTCAGGCTATAT 461 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20509241592 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5