BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486999 Length=338 Score E Sequences producing significant alignments: (Bits) Value AT5G02220.1 | Symbols: | unknown protein; Has 30201 Blast hits... 451 2e-126 > AT5G02220.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:441707-442146 REVERSE LENGTH=440 Length=440 Score = 451 bits (244), Expect = 2e-126 Identities = 319/352 (91%), Gaps = 17/352 (5%) Strand=Plus/Plus Query 1 GAGAGAAGAATGGAGGTGGTGGAGA-GAGCGACGGAAATGGCGGAGGAAGGATGTACGAC 59 ||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| Sbjct 36 GAGAGAAGAATGGAGGTGGTGGAGAGGA-AGACGGAGATGGCGGAGGAAGGATGTACGAC 94 Query 60 GCCGAGAAGCAGGATTTATAGGATTCCGGTGGCGTCTGTTTGTCCACCGCCGCCGAGGAA 119 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 95 GCCGAGAAGCACGATGTATAGGATTCCGGTGGCGTCTGTTTGTCCACCGCCGCCGAGGAA 154 Query 120 GAAATTGATGGTGGTGAGGAAACGAGATCCGCCGAGGAACGGGTATTTTCAACCACCGGA 179 ||| |||||||||||||| |||||||||||||||||||||||||| ||||| ||||| || Sbjct 155 GAAGTTGATGGTGGTGAGAAAACGAGATCCGCCGAGGAACGGGTACTTTCAGCCACCAGA 214 Query 180 TCTGGAAACTTTGTTCTACGCACAGCCTCGAAGAAAAGCTTGCGCTTAGATATTGAGATT 239 ||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 215 TCTTGAAACTTTGTTCTACGCACAGCCTCGAAGAGAAGCTTGCGCTTAGATTTTGAGATT 274 Query 240 TGATTTGAT---A-TT-TCTAGGGTTTTT----ACTTTCTTCTCTGTAGATACATGTTTA 290 ||||||||| | || |||||| ||||| ||||||||||||||||||||||||||| Sbjct 275 TGATTTGATTTGAATTATCTAGGTTTTTTTTTTACTTTCTTCTCTGTAGATACATGTTTA 334 Query 291 TGATTTGTTCTCTTAGATTAGATTTTATC-AT-T--CAGAGAGATGACTTTG 338 | |||||||||||| ||||||||||| || | |||||||||||||||| Sbjct 335 GGGTTTGTTCTCTTA--TTAGATTTTATTTATCTTTCAGAGAGATGACTTTG 384 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15784073186 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5