BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487095
Length=1188
Score E
Sequences producing significant alignments: (Bits) Value
AT5G03240.1 | Symbols: UBQ3 | polyubiquitin 3 | chr5:771752-773... 1349 0.0
AT5G20620.1 | Symbols: UBQ4 | ubiquitin 4 | chr5:6973071-697494... 1197 0.0
AT4G02890.3 | Symbols: UBQ14 | Ubiquitin family protein | chr4:... 833 0.0
AT1G65350.1 | Symbols: UBQ13 | ubiquitin 13 | chr1:24272518-242... 682 0.0
AT4G05050.1 | Symbols: UBQ11 | ubiquitin 11 | chr4:2588004-2589... 183 2e-45
> AT5G03240.1 | Symbols: UBQ3 | polyubiquitin 3 | chr5:771752-773363
REVERSE LENGTH=1237
Length=1237
Score = 1349 bits (730), Expect = 0.0
Identities = 1035/1176 (88%), Gaps = 46/1176 (4%)
Strand=Plus/Plus
Query 38 CGATTCTCTCTTTCAAGATGCAAATCTTTGTGAAAACACTCACTGGCAAGACCATCACTC 97
||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 76 CGACTCTCTCTTTCAAGATGCAAATCTTCGTGAAAACACTCACTGGCAAGACTATCACTC 135
Query 98 TCGAGGTTGAGAGCTCTGACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAG 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 136 TCGAGGTTGAGAGCTCTGACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAG 195
Query 158 GCATTCCTCCGGACCAGCAGAGATTAATCTTCGCCGGTAAACAGCTAGAAGATGGTCGTA 217
||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||
Sbjct 196 GCATTCCTCCGGATCAGCAAAGATTAATATTCGCCGGTAAACAGCTAGAAGATGGCCGTA 255
Query 218 CCTTGACCGATTACAATATCCAGAAAGAATCAACCCTCCACTTGGTTCTTCGTTTAAGAG 277
||||| |||||||||| || ||||||||||||||||| || |||||||| ||||||||||
Sbjct 256 CCTTGGCCGATTACAACATTCAGAAAGAATCAACCCTTCATTTGGTTCTCCGTTTAAGAG 315
Query 278 GTGGTATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAAGTTGAGA 337
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 316 GTGGTATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGA 375
Query 338 GCTCTGACACTATTGACAACGTCAAAGCAAAGATTCAGGACAAAGAAGGAATCCCTCCGG 397
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 376 GCTCTGACACTATTGACAACGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGG 435
Query 398 ACCAGCAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGAAGAACTCTTGCTGACT 457
| |||||||| |||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 436 ATCAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTTGCTGACT 495
Query 458 ACAACATCCAGAAGGAGTCGACACTTCACCTTG-TCCTTCGTCTTC-GTGGTGGTATGCA 515
||||||| || ||||||||||| ||||| ||| | |||||||| | | |||||||||||
Sbjct 496 ACAACATTCAAAAGGAGTCGACCCTTCAT-TTGGTGCTTCGTCT-CAGAGGTGGTATGCA 553
Query 516 GATCTTTGTGAAGACCCTCACTGGTAAAACAATTACCCTCGAGGTTGAGAGTTCAGACAC 575
|||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 554 AATCTTTGTCAAGACCCTCACTGGTAAAACAATCACCCTTGAGGTTGAGAGTTCAGACAC 613
Query 576 CATTGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAACAGAG 635
|||||| ||||||||||| |||||||| || || || |||||||||||||| || |||||
Sbjct 614 CATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATTCCTCCGGATCAGCAGAG 673
Query 636 GCTTATCTTTGCCGGTAAGCAGCTTGAGGACGGAAGAACTCTTGCTGACTACAACATCCA 695
|||||||||||||||||||||||| || || ||| | || ||||| || |||||||||||
Sbjct 674 GCTTATCTTTGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTGCAGATTACAACATCCA 733
Query 696 GAAAG-AGTCTACTCTCCAT-TTGGTGCTTCGTCTCAGAGGTGGTATGCAGATCTTTGTG 753
|||| |||| || || ||| ||| ||||||||||| | |||||||||||||||||||||
Sbjct 734 -AAAGGAGTCGACACTTCATCTTG-TGCTTCGTCTCCGTGGTGGTATGCAGATCTTTGTG 791
Query 754 AAGACCCTAACCGGCAAGACCATAACTTTGGAGGTGGAGAGCTCAGACACAATTGATAAT 813
|||||||| ||||| |||||||| ||| ||||||| || ||||||||||| || ||||||
Sbjct 792 AAGACCCTTACCGGAAAGACCATTACTCTGGAGGTTGAAAGCTCAGACACCATCGATAAT 851
Query 814 GTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAACAGAGGCTCATCTTC 873
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 852 GTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAACAGAGACTCATCTTC 911
Query 874 GCTGGTAAACAGCTTGAGGATGGTCGGACT-TTAGCTGATTACAACATTCAGAAGGAATC 932
||||| |||||||||||||||||||| || || || ||||||||||| |||||||| ||
Sbjct 912 GCTGGAAAACAGCTTGAGGATGGTCGCACACTT-GCAGATTACAACATCCAGAAGGAGTC 970
Query 933 TACCCTTCACCTTG-TG-TTGCGTCTGCGTGGTGGAAGCTTCTAAGCTTTT-GTGATCTG 989
|| |||||| ||| | || ||||| |||||||||||||||||||||||| ||||||||
Sbjct 971 GACTCTTCAC-TTGGTTCTT-CGTCTTCGTGGTGGAAGCTTCTAAGCTTTTTGTGATCTG 1028
Query 990 ATCAAAAGTGGC-GGTTCTCTGTGTCATGCACTTGGGAGGTGATG-AT-------G-TG- 1038
|| | |||||| ||||| ||| |||||||||||||||||||| || | ||
Sbjct 1029 ATGATAAGTGGTTGGTTCG-TGTCTCATGCACTTGGGAGGTGATCTATTTCACCTGGTGT 1087
Query 1039 A-TGT-TCTTCACC-TG-GT-GGAAAAACTTGTCCCTTTAGTTGTTTTAAGTTT-CATCG 1092
| | | | || || | || |||||||||| ||||| | | | ||| |||| |||
Sbjct 1088 AGTTTGTGTTT-CCGTCAGTTGGAAAAACTTATCCCT--A-TCGATTTC-GTTTTCATTT 1142
Query 1093 TCTGCTTTTCTTGTATGTTCTTATTAACTTTTGGTTGGGCTCGTAACGGGCCTTTGTCTT 1152
|||||||||||| ||||| | | | | ||||| | || ||||||||||||||| ||
Sbjct 1143 TCTGCTTTTCTTTTATGTACCT-T---CGTTTGG--G--CTTGTAACGGGCCTTTGTATT 1194
Query 1153 TCAACTTTCAATAATAATCCAAGTGCATTTTAAACA 1188
|||||| ||||||||||||||||||||| |||||||
Sbjct 1195 TCAACTCTCAATAATAATCCAAGTGCATGTTAAACA 1230
Score = 647 bits (350), Expect = 0.0
Identities = 571/679 (84%), Gaps = 10/679 (1%)
Strand=Plus/Plus
Query 55 ATGCAAATCTTTGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGCTCT 114
|||||||||||||| || || || |||||||||||||| ||| | |||||||||||||||
Sbjct 321 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCT 380
Query 115 GACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGACCAG 174
||||| || ||||| || || |||||||| |||||||||||||| || |||||||| |||
Sbjct 381 GACACTATTGACAACGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGATCAG 440
Query 175 CAGAGA-TTAATCTTCGCCGGTAAACAGCTAGAAGATGGTCGTAC-CTTGACCGATTACA 232
|||||| || ||||| |||||||| ||||| ||||| || | || |||| | || ||||
Sbjct 441 CAGAGACTT-ATCTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTTG-CTGACTACA 498
Query 233 ATATCCAGAAA-GAATCAACCCTCCACTTGGTTCTTCGTTTAAGAGGTGGTATGCAGATC 291
| || || ||| || || ||||| || ||||| |||||| | |||||||||||||| |||
Sbjct 499 ACATTCA-AAAGGAGTCGACCCTTCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAAATC 557
Query 292 TTTGTCAAGACTCTGACTGGCAAGACCATTA-CTTTGGAAGTTGAGAGCTCTGACACTAT 350
||||||||||| || ||||| || || || | | || || |||||||| || ||||| ||
Sbjct 558 TTTGTCAAGACCCTCACTGGTAAAACAATCACCCTT-GAGGTTGAGAGTTCAGACACCAT 616
Query 351 TGACAACGTCAAAGCAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAGAGGCT 410
|||||| |||||||| ||||| || || ||||| ||||| |||||||| |||||||||||
Sbjct 617 TGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATTCCTCCGGATCAGCAGAGGCT 676
Query 411 TATCTTTGCCGGTAAGCAGCTTGAGGATGGAAGAACTCTTGCTGACTACAACATCCAGAA 470
||||||||||||||||||||| || |||||| | || ||||| || ||||||||||| ||
Sbjct 677 TATCTTTGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTGCAGATTACAACATCCAAAA 736
Query 471 GGAGTCGACACTTCACCTTGTCCTTCGTCTTCGTGGTGGTATGCAGATCTTTGTGAAGAC 530
||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 737 GGAGTCGACACTTCATCTTGTGCTTCGTCTCCGTGGTGGTATGCAGATCTTTGTGAAGAC 796
Query 531 CCTCACTGGTAAA-ACAATTACCCTCGAGGTTGAGAGTTCAGACACCATTGATAATGTCA 589
||| || || ||| || ||||| || |||||||| || ||||||||||| ||||||||||
Sbjct 797 CCTTACCGG-AAAGACCATTACTCTGGAGGTTGAAAGCTCAGACACCATCGATAATGTCA 855
Query 590 AAGCCAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAACAGAGGCTTATCTTTGCCG 649
| || ||||| |||||||||||||| || || || ||||||||||| || ||||| || |
Sbjct 856 AGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAACAGAGACTCATCTTCGCTG 915
Query 650 GTAAGCAGCTTGAGGACGGAAGAACTCTTGCTGACTACAACATCCAGAAAGAGTCTACTC 709
| || ||||||||||| || | || ||||| || |||||||||||||| ||||| ||||
Sbjct 916 GAAAACAGCTTGAGGATGGTCGCACACTTGCAGATTACAACATCCAGAAGGAGTCGACTC 975
Query 710 TCCATTTGGTGCTTCGTCT 728
| || ||||| ||||||||
Sbjct 976 TTCACTTGGTTCTTCGTCT 994
Score = 569 bits (308), Expect = 2e-161
Identities = 567/692 (82%), Gaps = 18/692 (3%)
Strand=Plus/Plus
Query 283 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAAGTTGAGAGCTCT 342
||||| ||||| || || || || ||||||||||| || ||| | || ||||||||||||
Sbjct 93 ATGCAAATCTTCGTGAAAACACTCACTGGCAAGACTATCACTCTCGAGGTTGAGAGCTCT 152
Query 343 GACACTATTGACAACGTCAAAGCAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 402
||||| || ||||| || || ||||||||||||||||| ||||| || |||||||| |||
Sbjct 153 GACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 212
Query 403 CAGAGGCTT-ATCTTTGCCGGTAAGCAGCTTGAGGATGGAAGAACTCTT-GCTGACTACA 460
|| | | || || || |||||||| ||||| || ||||| | || ||| || || ||||
Sbjct 213 CA-AAGATTAATATTCGCCGGTAAACAGCTAGAAGATGGCCGTAC-CTTGGCCGATTACA 270
Query 461 ACATCCAGAAGGAGTCGACACTTCACCTT-GTCCTTCGTCTT-CGTGGTGGTATGCAGAT 518
|||| ||||| || || || ||||| || || || ||| || | ||||||||||| ||
Sbjct 271 ACATTCAGAAAGAATCAACCCTTCA-TTTGGTTCTCCGT-TTAAGAGGTGGTATGCAAAT 328
Query 519 CTTTGTGAAGACCCTCACTGGTAAAACAATTACCCTCGAGGTTGAGAGTTCAGACACCAT 578
|||||| ||||| || ||||| || || ||||| | ||||||||||| || ||||| ||
Sbjct 329 CTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCTGACACTAT 388
Query 579 TGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAACAGAGGCT 638
||| || |||||||| ||||||||||||||||||||||| |||||||| || ||||| ||
Sbjct 389 TGACAACGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGATCAGCAGAGACT 448
Query 639 TATCTTTGCCGGTAAGCAGCTTGAGGACGGAAGAACTCTTGCTGACTACAACATCCAGAA 698
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct 449 TATCTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTTGCTGACTACAACATTCA-AA 507
Query 699 A-GAGTCTACTCTCCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAGATCTTTGTGAAGA 757
| ||||| || || |||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 508 AGGAGTCGACCCTTCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAAATCTTTGTCAAGA 567
Query 758 CCCTAACCGGCAAGACCATAACT-TTGGAGGTGGAGAGCTCAGACACAATTGATAATGTC 816
|||| || || || || || || ||| |||| ||||| |||||||| ||||| ||||||
Sbjct 568 CCCTCACTGGTAAAACAATCACCCTTG-AGGTTGAGAGTTCAGACACCATTGACAATGTC 626
Query 817 AAGGCTAAGATTCAGGACAAGGAAGGGA-TCCCACCAGACCAACAGAGGCTCATCTTCGC 875
|| |||||||| || || || || |||| | || || || || |||||||| ||||| ||
Sbjct 627 AAAGCTAAGATCCAAGATAAAGA-GGGAATTCCTCCGGATCAGCAGAGGCTTATCTTTGC 685
Query 876 TGGTAAACAGCTTGAGGATGGTCGGACT-TTAGCTGATTACAACATTCAGAAGGAATCTA 934
||||| ||||| || ||||| || || || || ||||||||||| || ||||| || |
Sbjct 686 CGGTAAGCAGCTCGAAGATGGACGCACCCTT-GCAGATTACAACATCCAAAAGGAGTCGA 744
Query 935 CCCTTCACCTTGTG-TTGCGTCTGCGTGGTGG 965
| ||||| |||||| || ||||| ||||||||
Sbjct 745 CACTTCATCTTGTGCTT-CGTCTCCGTGGTGG 775
> AT5G20620.1 | Symbols: UBQ4 | ubiquitin 4 | chr5:6973071-6974946
REVERSE LENGTH=1491
Length=1491
Score = 1197 bits (648), Expect = 0.0
Identities = 840/934 (90%), Gaps = 8/934 (1%)
Strand=Plus/Plus
Query 36 AACGATTCTCTCTTTCAAGATGCAAATCTTT-GTGAAAACACTCACTGGCAAGACCATCA 94
||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||
Sbjct 80 AACGATTCTCTCTTTCAAGATGCAAAT-TTTCGTGAAAACACTCACTGGTAAGACCATCA 138
Query 95 CTCTCGAGGTTGAGAGCTCTGACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGG 154
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 139 CTCTCGAGGTTGAGAGCTCTGACACCATCGACAATGTTAAGGCAAAGATCCAGGACAAGG 198
Query 155 AAGGCATTCCTCCGGACCAGCAGAGATTAATCTTCGCCGGTAAACAGCTAGAAGATGGTC 214
||||||||||||| |||||||| ||||| |||||||| ||||| |||||||||||||| |
Sbjct 199 AAGGCATTCCTCCTGACCAGCAAAGATTGATCTTCGCTGGTAAGCAGCTAGAAGATGGCC 258
Query 215 GTACCTTGACCGATTACAATATCCAGAAAGAATCAACCCTCCACTTGGTTCTTC-GTTTA 273
| |||||| | |||||||| ||||||||||||||||| |||||||||||||| | | |||
Sbjct 259 GCACCTTGGCTGATTACAACATCCAGAAAGAATCAACACTCCACTTGGTTCT-CAGGTTA 317
Query 274 AGAGGTGGTATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAAGTT 333
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||
Sbjct 318 AGAGGTGGTATGCAGATCTTTGTCAAGACTCTGACTGGCAAAACCATTACCTTGGAGGTT 377
Query 334 GAGAGCTCTGACACTATTGACAACGTCAAAGCAAAGATTCAGGACAAAGAAGGAATCCCT 393
|| |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct 378 GAAAGCTCTGACACTATTGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCT 437
Query 394 CCGGACCAGCAGAGGCTTATCTTT-GCCGGTAAGCAGCTTGAGGATGGAAGAACTCTTGC 452
||||||||||| || ||||| ||| || |||||||||||||| |||||||| ||||||||
Sbjct 438 CCGGACCAGCAAAGACTTAT-TTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGC 496
Query 453 TGACTACAACATCCAGAAGGAGTCGACACTTCACCTTGTCCTTCGTCTTCGTGGTGGTAT 512
||||||||| ||||| |||||||| || |||||||||||||||||||| |||||||||||
Sbjct 497 TGACTACAATATCCAAAAGGAGTCTACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTAT 556
Query 513 GCAGATCTTTGTGAAGACCCTCACTGGTAAAACAATTACCCTCGAGGTTGAGAGTTCAGA 572
||| |||||||||||||| || || ||||||||||| ||||| ||||||||||| |||||
Sbjct 557 GCAAATCTTTGTGAAGACTCTGACGGGTAAAACAATCACCCTTGAGGTTGAGAGCTCAGA 616
Query 573 CACCATTGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAACA 632
||||||||| ||||||||||| |||||||| || || || ||||| || |||||||| ||
Sbjct 617 CACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAGCA 676
Query 633 GAGGCTTATCTTTGCCGGTAAGCAGCTTGAGGACGGAAGAACTCTTGCTGACTACAACAT 692
||||||||||||||||||||||||||| ||||| || | ||||||||||| ||||||||
Sbjct 677 GAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGATTACAACAT 736
Query 693 CCAGAAAGAGTCTACTCTCCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAGATCTTTGT 752
||| |||||||| || || ||||||||||||||||| ||||||||||||||||| |||||
Sbjct 737 CCAAAAAGAGTCAACCCTTCATTTGGTGCTTCGTCTGAGAGGTGGTATGCAGATTTTTGT 796
Query 753 GAAGACCCTAACCGGCAAGACCATAACTTTGGAGGTGGAGAGCTCAGACACAATTGATAA 812
||||||| |||| |||||||| || ||||||||||| ||||||||||||||||| |||||
Sbjct 797 GAAGACCTTAACTGGCAAGACTATCACTTTGGAGGTTGAGAGCTCAGACACAATCGATAA 856
Query 813 TGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAACAGAGGCTCATCTT 872
||||||||| |||||||| |||||||||||||| |||||||| || ||||| ||||| ||
Sbjct 857 TGTCAAGGCAAAGATTCAAGACAAGGAAGGGATTCCACCAGATCAGCAGAGACTCATATT 916
Query 873 CGCTGGTAAACAGCTTGAGGATGGTCGGACTTTAGCTGATTACAACATTCAGAAGGAATC 932
||||| ||||||||||| ||||| || || | |||||||||||||| || ||||| ||
Sbjct 917 TGCTGGAAAACAGCTTGAAGATGGACGCACACTCGCTGATTACAACATCCAAAAGGAGTC 976
Query 933 TACCCTTCACCTTGTG-TTGCGTCTGCGTGGTGG 965
|||||| || |||||| || ||||| ||||||||
Sbjct 977 TACCCTCCATCTTGTGCTT-CGTCTCCGTGGTGG 1009
Score = 944 bits (511), Expect = 0.0
Identities = 914/1104 (83%), Gaps = 46/1104 (4%)
Strand=Plus/Plus
Query 55 ATGCAAATCTTTGTGAAAACACTCACTGGCAAGACCATCA-CTCTCGAGGTTGAGAGCTC 113
||||| |||||||| || || || |||||||| ||||| | || | |||||||| |||||
Sbjct 327 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAAACCATTACCT-TGGAGGTTGAAAGCTC 385
Query 114 TGACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGACCA 173
|||||| || ||||| || ||||||||||| |||||||||||||| || |||||||||||
Sbjct 386 TGACACTATTGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCA 445
Query 174 GCAGAGA-TTAATCTTCGCCGGTAAACAGCTAGAAGATGGTCGTAC-CTTGACCGATTAC 231
||| ||| || || ||||| ||||| ||||| |||||||| | || |||| | || |||
Sbjct 446 GCAAAGACTT-ATTTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTG-CTGACTAC 503
Query 232 AATATCCAGAAA-GAATCAACCCTCCA-CTTGGTTCTTCGTTTAAGAGGTGGTATGCAGA 289
|||||||| ||| || || || || || ||| || |||||| | | ||||||||||| |
Sbjct 504 AATATCCA-AAAGGAGTCTACTCTTCACCTT-GTCCTTCGTCTCCGTGGTGGTATGCAAA 561
Query 290 TCTTTGTCAAGACTCTGACTGGCAAGACCATTA-CTTTGGAAGTTGAGAGCTCTGACACT 348
||||||| ||||||||||| || || || || | | || || ||||||||||| |||||
Sbjct 562 TCTTTGTGAAGACTCTGACGGGTAAAACAATCACCCTT-GAGGTTGAGAGCTCAGACACC 620
Query 349 ATTGACAACGTCAAAGCAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAGAGG 408
|||||||| |||||||| ||||| || || ||||| |||||||| |||||||||||||||
Sbjct 621 ATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAGCAGAGG 680
Query 409 CTTATCTTTGCCGGTAAGCAGCTTGAGGATGGAAGAACTCTTGCTGACTACAACATCCAG 468
||||||||||||||||||||||| |||||||| | ||||||||||| |||||||||||
Sbjct 681 CTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGATTACAACATCCAA 740
Query 469 AAGGAGTCGACACTTCACCTT-GTCCTTCGTCTTCGTGGTGGTATGCAGATCTTTGTGAA 527
|| ||||| || ||||| || || |||||||| | |||||||||||||| ||||||||
Sbjct 741 AAAGAGTCAACCCTTCA-TTTGGTGCTTCGTCTGAGAGGTGGTATGCAGATTTTTGTGAA 799
Query 528 GACCCTCACTGGTAAAACAATTACCCTCGAGGTTGAGAGTTCAGACACCATTGATAATGT 587
|||| | ||||| || || || || | ||||||||||| |||||||| || ||||||||
Sbjct 800 GACCTTAACTGGCAAGACTATCACTTTGGAGGTTGAGAGCTCAGACACAATCGATAATGT 859
Query 588 CAAAGCCAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAACAGAGGCTTATCTTTGC 647
||| || ||||| || ||||||||||| ||||| || || || ||||| || || |||||
Sbjct 860 CAAGGCAAAGATTCAAGACAAGGAAGGGATTCCACCAGATCAGCAGAGACTCATATTTGC 919
Query 648 CGGTAAGCAGCTTGAGGACGGAAGAACTCTTGCTGACTACAACATCCAGAAA-GAGTCTA 706
|| || |||||||| || ||| | || || ||||| ||||||||||| ||| |||||||
Sbjct 920 TGGAAAACAGCTTGAAGATGGACGCACACTCGCTGATTACAACATCCA-AAAGGAGTCTA 978
Query 707 CTCTCCAT-TTGGTGCTTCGTCTCAGAGGTGGTATGCAGATCTTTGTGAAGACCCTAACC 765
| |||||| || |||||||||||| | |||||||||||||| |||||||||||||| |||
Sbjct 979 CCCTCCATCTT-GTGCTTCGTCTCCGTGGTGGTATGCAGATATTTGTGAAGACCCTTACC 1037
Query 766 GGCAAGACCATAACT-TTGGAGGTGGAGAGCTCAGACACAATTGATAATGTCAAGGCTAA 824
|| || ||||| ||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1038 GGAAAAACCATTACTCTT-GAGGTTGAGAGCTCAGACACAATTGATAATGTCAAGGCTAA 1096
Query 825 GATTCAGGACAAGGAAGGGATCCCACCAGACCAACAGAGGCTCATCTTCGCTGGTAAACA 884
||||||||||||||||||||||||||| ||||||||||| |||||||||||||| || ||
Sbjct 1097 GATTCAGGACAAGGAAGGGATCCCACCGGACCAACAGAGACTCATCTTCGCTGGGAAGCA 1156
Query 885 GCTTGAGGATGGTCGGACT-TTAGCTGATTACAACATTCAGAAGGAATCTACCCTTCACC 943
||||||||||||||||||| || || ||||||||||| |||||||| || || ||||||
Sbjct 1157 GCTTGAGGATGGTCGGACTCTT-GCAGATTACAACATCCAGAAGGAGTCGACTCTTCAC- 1214
Query 944 TTG-TG-TTGCGTCTGCGTGGTGGAAGCTTCTAAGCTTTTGTGATCTGATCAAAAGTGGC 1001
||| | || ||||| |||||||||||||||| |||||||||||| |||||||||||||
Sbjct 1215 TTGGTTCTT-CGTCTTCGTGGTGGAAGCTTCTGAGCTTTTGTGATGTGATCAAAAGTGGT 1273
Query 1002 GGTTCTCTGTGTCATGCACTTGGGAGGTGATGATGTG-A--TG-TTC--TT-CACCT--G 1052
|||| || ||||||||||||||||||| ||| | | || || || | || |
Sbjct 1274 TGTTCGA-GTCTCATGCACTTGGGAGGTGA-GATCTTCACCTGGTTTGGTTTCTGCTTCG 1331
Query 1053 GT--G-G--AAAAACTTGTCCCTT-TAGTTGTTTT-AAGTTTCATCGTCTGCTTTTCTTG 1105
|| | | |||||||| ||| || | | |||| | ||||||||| |||| |||||||
Sbjct 1332 GTCTGCGGGAAAAACTTATCC-TTATCGATGTTCTGAAGTTTCATTTTCTG-TTTTCTTT 1389
Query 1106 TATGTTCTTATTAACTTTTGGTTG 1129
||| ||||||| ||| ||||||||
Sbjct 1390 TATTTTCTTATGAACCTTTGGTTG 1413
> AT4G02890.3 | Symbols: UBQ14 | Ubiquitin family protein | chr4:1278530-1280028
REVERSE LENGTH=1499
Length=1499
Score = 833 bits (451), Expect = 0.0
Identities = 774/928 (83%), Gaps = 30/928 (3%)
Strand=Plus/Plus
Query 53 AGATGCAAATCTTTGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGCT 112
||||||| |||||||| || || ||||| || ||||| ||||| |||||||| || ||||
Sbjct 363 AGATGCAGATCTTTGTTAAGACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGCT 422
Query 113 CTGACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGACC 172
|||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||| |
Sbjct 423 CTGACACCATCGACAACGTTAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCGGATC 482
Query 173 AGCAGA-GATTAATCTTCGCCGGTAAACAGCTAGAAGATGGTCGTACCTTGACCGATTAC 231
|||||| | || || |||||||| ||||||||||| ||||| ||||| ||| | ||||||
Sbjct 483 AGCAGAGGCTT-ATTTTCGCCGGAAAACAGCTAGAGGATGGCCGTACGTTGGCTGATTAC 541
Query 232 AATATCCAGAAAGAATCAACCCTCCACTTGGTTCTTC-GTTTAAGAGGTGGTATGCAGAT 290
||||||||||| ||||| |||||||||||||||| || | | | ||||||||||||||
Sbjct 542 AATATCCAGAAGGAATCCACCCTCCACTTGGTTC-TCAGGCTCCGTGGTGGTATGCAGAT 600
Query 291 CTTT-GTCAAGA-CTCTGACTGGCAAGACCATTACT-TTGGAAGTTGAGAGCTCTGACAC 347
||| ||||||| || | || || ||||| |||||| || || || ||||| ||||||||
Sbjct 601 -TTTCGTCAAGACCT-TAACGGGAAAGACGATTACTCTT-GAGGTGGAGAGTTCTGACAC 657
Query 348 TATTGACAACGTCAAAGCAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAGAG 407
|| ||||||||||| || ||||| || ||||| || || || |||||||||||||||||
Sbjct 658 CATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAGCAGAG 717
Query 408 GCTT-ATCTTTGCCGGTAAGCAGCTT-GAGGATGGAAGAACTCTTGCTGACTACAACATC 465
| || ||||| || || |||||| || |||||||| ||||||||||||||||||||||||
Sbjct 718 G-TTGATCTTCGCTGGAAAGCAG-TTGGAGGATGGCAGAACTCTTGCTGACTACAACATC 775
Query 466 CAGAAGGAGTCGACACTTCACCTTGTCCTTC-GTCTTCGTGGTGGTATGCAGATCTTTGT 524
||||||||||| |||||||| ||||| || | | || |||||||||||||||||||||||
Sbjct 776 CAGAAGGAGTCCACACTTCATCTTGTTCT-CAGGCTCCGTGGTGGTATGCAGATCTTTGT 834
Query 525 GAAGACCCTCACTGGTAAA-ACAATTACCCTCGAGGTTGAGAGTTCAGACACCATTGATA 583
||||| | ||||| ||| || || || | ||||| ||||| || ||||| || || |
Sbjct 835 CAAGACGTTGACTGG-AAAGACTATCACTTTGGAGGTGGAGAGCTCTGACACTATCGACA 893
Query 584 ATGTCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAACAGAGGCTT-ATC 642
||||||||||||||||||||||||| || || || || |||||||| ||||| || |||
Sbjct 894 ATGTCAAAGCCAAGATCCAGGACAAAGAGGGTATCCCACCGGACCAGCAGAGA-TTGATC 952
Query 643 TTTGCCGGTAAGCAGCTTGAGGACGGAAGAACTCTTG-CTGACTACAACATCCAGAAAGA 701
|| ||||| || || ||||| || || |||||| ||| ||||||||||||| ||||| ||
Sbjct 953 TTCGCCGGAAAACAACTTGAAGATGGTAGAACT-TTGGCTGACTACAACATTCAGAAGGA 1011
Query 702 GTCTACTCTCCATTTGGTGCTT-CGTCTCAGAGGTGGTATGCAGATCTTT-GTGAAGACC 759
|||||| || || |||||| || |||||| | || ||||||||||| ||| ||||||||
Sbjct 1012 GTCTACACTTCACTTGGTG-TTGCGTCTCCGTGGAGGTATGCAGAT-TTTCGTGAAGACT 1069
Query 760 CTAACCGGCAAGACCATAACT-TTGGAGGTGGAGAGCTCAGACACAATTGATAATGTCAA 818
|| || || |||||||| ||| ||| || || ||||||| ||||| ||||| || || ||
Sbjct 1070 CTCACTGGAAAGACCATTACTCTTGAAGTTG-AGAGCTCCGACACCATTGACAACGTGAA 1128
Query 819 GGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAACAGAGGCTCATCTTCGCTGG 878
||||||||| |||||||||||||| ||||| || ||||| ||| | ||||||||||||||
Sbjct 1129 GGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAGCAGCGTCTCATCTTCGCTGG 1188
Query 879 TAAACAGCTTGAGGATGGTCGGACTTTAGCTGATTACAACATTCAGAAGGAATCTACCCT 938
|||||||||||||||||||| ||||| || || |||||||| |||||||| ||||||||
Sbjct 1189 AAAACAGCTTGAGGATGGTCGTACTTTGGCCGACTACAACATCCAGAAGGAGTCTACCCT 1248
Query 939 TCACCTTG-TGTTGCGTCTGCGTGGTGG 965
|||| ||| || | | || ||||||||
Sbjct 1249 TCAC-TTGGTGCTAAGGCTCCGTGGTGG 1275
Score = 564 bits (305), Expect = 8e-160
Identities = 567/692 (82%), Gaps = 24/692 (3%)
Strand=Plus/Plus
Query 283 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAAGTTGAGAGCTCT 342
|||||||||||||| |||||||| || || ||||| || || | || || || ||||||
Sbjct 365 ATGCAGATCTTTGTTAAGACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGCTCT 424
Query 343 GACACTATTGACAACGTCAAAGCAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 402
||||| || |||||||| || || ||||| ||||| || ||||| || |||||||| |||
Sbjct 425 GACACCATCGACAACGTTAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAG 484
Query 403 CAGAGGCTTATCTTT-GCCGGTAAGCAGCTTGAGGATGGAAGAACTCTT-GCTGACTACA 460
||||||||||| ||| ||||| || ||||| |||||||| | || || ||||| ||||
Sbjct 485 CAGAGGCTTAT-TTTCGCCGGAAAACAGCTAGAGGATGGCCGTAC-GTTGGCTGATTACA 542
Query 461 ACATCCAGAAGGAGTCGACACTTCACCTT-GTCCTTC-GTCTTCGTGGTGGTATGCAGAT 518
| ||||||||||| || || || || ||| || | || | || |||||||||||||||||
Sbjct 543 ATATCCAGAAGGAATCCACCCTCCA-CTTGGTTC-TCAGGCTCCGTGGTGGTATGCAGAT 600
Query 519 CTTT-GTGAAGACCCTCACTGGTAAA-ACAATTACCCTCGAGGTTGAGAGTTCAGACACC 576
||| || |||||| | || || ||| || ||||| || ||||| |||||||| ||||||
Sbjct 601 -TTTCGTCAAGACCTTAAC-GGGAAAGACGATTACTCTTGAGGTGGAGAGTTCTGACACC 658
Query 577 ATTGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAACAGAGG 636
|| || || ||||| ||||||||||| |||||||| || |||||||||||||| ||||||
Sbjct 659 ATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAGCAGAGG 718
Query 637 CTT-ATCTTTGCCGGTAAGCAGCTT-GAGGACGGAAGAACTCTTGCTGACTACAACATCC 694
|| ||||| || || |||||| || ||||| || |||||||||||||||||||||||||
Sbjct 719 -TTGATCTTCGCTGGAAAGCAG-TTGGAGGATGGCAGAACTCTTGCTGACTACAACATCC 776
Query 695 AGAAAGAGTCTACTCTCCAT-TTGGTGCTTC-GTCTCAGAGGTGGTATGCAGATCTTTGT 752
|||| ||||| || || ||| ||| | || | | ||| | ||||||||||||||||||||
Sbjct 777 AGAAGGAGTCCACACTTCATCTTGTT-CT-CAGGCTCCGTGGTGGTATGCAGATCTTTGT 834
Query 753 GAAGACCCTAACCGGCAAGACCATAACTTTGGAGGTGGAGAGCTCAGACACAATTGATAA 812
||||| | || || ||||| || |||||||||||||||||||| ||||| || || ||
Sbjct 835 CAAGACGTTGACTGGAAAGACTATCACTTTGGAGGTGGAGAGCTCTGACACTATCGACAA 894
Query 813 TGTCAAGGCTAAGATTCAGGACAAGGAAGGG-ATCCCACCAGACCAACAGAGGCTCATCT 871
|||||| || ||||| |||||||| || ||| |||||||| ||||| ||||| | ||||
Sbjct 895 TGTCAAAGCCAAGATCCAGGACAAAGA-GGGTATCCCACCGGACCAGCAGAGATTGATCT 953
Query 872 TCGCTGGTAAACAGCTTGAGGATGGTCGGACTTTAGCTGATTACAACATTCAGAAGGAAT 931
|||| || ||||| ||||| |||||| | ||||| ||||| ||||||||||||||||| |
Sbjct 954 TCGCCGGAAAACAACTTGAAGATGGTAGAACTTTGGCTGACTACAACATTCAGAAGGAGT 1013
Query 932 CTACCCTTCACCTTG-TGTTGCGTCTGCGTGG 962
|||| |||||| ||| |||||||||| |||||
Sbjct 1014 CTACACTTCAC-TTGGTGTTGCGTCTCCGTGG 1044
> AT1G65350.1 | Symbols: UBQ13 | ubiquitin 13 | chr1:24272518-24277275
REVERSE LENGTH=960
Length=960
Score = 682 bits (369), Expect = 0.0
Identities = 585/689 (85%), Gaps = 15/689 (2%)
Strand=Plus/Plus
Query 283 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAAGTTGAGAGCTCT 342
|||||||| |||||||||||| |||| ||||| ||||| |||||||| ||||| || |||
Sbjct 1 ATGCAGATTTTTGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAGGTTGAAAGTTCT 60
Query 343 GACACTATTGACAACGTCAAAGCAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 402
|| ||||||||||| || || || ||||| ||||| || ||||||||||||||||| |||
Sbjct 61 GATACTATTGACAATGTTAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCGGATCAG 120
Query 403 CAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGAAGAACTCTTGCTGACTACAAC 462
|||||||||||||||||||||||||||||||| || || | || || ||||| ||||||
Sbjct 121 CAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAAGACGGTCGCACACTCGCTGATTACAAC 180
Query 463 ATCCAGAAGGAGTCGACACTTCACCTTG-TCCTTCGTCTTC-GTGGTGGTATGCAGATCT 520
||||| |||||||| || || || ||| | |||||||| | | |||||||||||||| |
Sbjct 181 ATCCAAAAGGAGTCCACCCTCCAT-TTGGTGCTTCGTCT-CAGAGGTGGTATGCAGATAT 238
Query 521 TTGTGAAGACCCTCACTGGTAAA-ACAATTACCCTCGAGGTTGAGAGTTCAGACACCATT 579
||||||||||||||||||| ||| ||||| || | ||||||||||| |||||||||||
Sbjct 239 TTGTGAAGACCCTCACTGG-AAAGACAATCACTTTGGAGGTTGAGAGCTCAGACACCATC 297
Query 580 GATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAACAGAGGCTT 639
||||| || || || ||||| |||||||||||||| || || || ||||||||||| ||
Sbjct 298 GATAACGTGAAGGCTAAGATTCAGGACAAGGAAGGTATCCCACCAGACCAACAGAGACTC 357
Query 640 ATCTTTGCCGGTAAGCAGCTTGAGGACGGAAGAACTCTTGCTGACTACAACATCCAGAAA 699
||||| || || || ||||||||||| || | || ||||||||| | | ||||||||
Sbjct 358 ATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACACTTGCTGAC-A-AT-ATCCAGAAG 414
Query 700 GAGTCTACTCTCCAT-TTGGTGCTT-CGTCT-CAGAGGTGGTATGCAGATCTTTGTGAAG 756
|||||||| || || ||| || || ||||| | | ||||||||||| |||||||||||
Sbjct 415 GAGTCTACGCTTCACCTTG-TG-TTGCGTCTTC-GTGGTGGTATGCAAATCTTTGTGAAA 471
Query 757 ACCCTAACCGGCAAGACCATAACTTTGGAGGTGGAGAGCTCAGACACAATTGATAATGTC 816
|| | || ||||||||||| || |||||||| |||||||||||||||||||||||||||
Sbjct 472 ACTTTGACAGGCAAGACCATTACCTTGGAGGTTGAGAGCTCAGACACAATTGATAATGTC 531
Query 817 AAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAACAGAGGCTCATCTTCGCT 876
|| |||||||||||||| |||||| |||||||||||||||||||||| |||||||| |||
Sbjct 532 AAAGCTAAGATTCAGGATAAGGAATGGATCCCACCAGACCAACAGAGACTCATCTTTGCT 591
Query 877 GGTAAACAGCTTGAGGATGGTCGGACTTTAGCTGATTACAACATTCAGAAGGAATCTACC 936
||||||||||| |||||||| ||||||| |||||||||||||| ||||| || |||||
Sbjct 592 GGTAAACAGCTCGAGGATGGAAGGACTTTGGCTGATTACAACATCCAGAAAGAGTCTACT 651
Query 937 CTTCACCTTGTGTTGCGTCTGCGTGGTGG 965
||||||||||| |||||||| ||||||||
Sbjct 652 CTTCACCTTGTATTGCGTCTTCGTGGTGG 680
Score = 499 bits (270), Expect = 2e-140
Identities = 396/457 (87%), Gaps = 7/457 (2%)
Strand=Plus/Plus
Query 511 ATGCAGATCTTTGTGAAGACCCTCACTGGTAAAACAATTACCCTCGAGGTTGAGAGTTCA 570
|||||||| ||||| ||||| | || || ||||| || || | |||||||| |||||
Sbjct 1 ATGCAGATTTTTGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAGGTTGAAAGTTCT 60
Query 571 GACACCATTGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAA 630
|| || ||||| ||||| || || ||||||||||| ||||||||||| |||||||| ||
Sbjct 61 GATACTATTGACAATGTTAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCGGATCAG 120
Query 631 CAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAGGACGGAAGAACTCTTGCTGACTACAAC 690
|||||||||||||||||||||||||||||||| ||||| | || || ||||| ||||||
Sbjct 121 CAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAAGACGGTCGCACACTCGCTGATTACAAC 180
Query 691 ATCCAGAAA-GAGTCTACTCTCCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAGATCTT 749
||||| ||| ||||| || |||||||||||||||||||||||||||||||||||||| ||
Sbjct 181 ATCCA-AAAGGAGTCCACCCTCCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAGATATT 239
Query 750 TGTGAAGACCCTAACCGGCAAGACCATAACTTTGGAGGTGGAGAGCTCAGACACAATTGA 809
|||||||||||| || || ||||| || ||||||||||| |||||||||||||| || ||
Sbjct 240 TGTGAAGACCCTCACTGGAAAGACAATCACTTTGGAGGTTGAGAGCTCAGACACCATCGA 299
Query 810 TAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAACAGAGGCTCAT 869
||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 300 TAACGTGAAGGCTAAGATTCAGGACAAGGAAGGTATCCCACCAGACCAACAGAGACTCAT 359
Query 870 CTTCGCTGGTAAACAGCTTGAGGATGGTCGGACT-TTAGCTGATTACAACATTCAGAAGG 928
||||||||| |||||||||||||||||||| || || ||||| ||| || |||||||
Sbjct 360 CTTCGCTGGGAAACAGCTTGAGGATGGTCGCACACTT-GCTGA---CAATATCCAGAAGG 415
Query 929 AATCTACCCTTCACCTTGTGTTGCGTCTGCGTGGTGG 965
| ||||| |||||||||||||||||||| ||||||||
Sbjct 416 AGTCTACGCTTCACCTTGTGTTGCGTCTTCGTGGTGG 452
> AT4G05050.1 | Symbols: UBQ11 | ubiquitin 11 | chr4:2588004-2589386
REVERSE LENGTH=1049
Length=1049
Score = 183 bits (99), Expect = 2e-45
Identities = 180/219 (82%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 55 ATGCAAATCTTTGTGAAA-ACACTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGCTC 113
||||| ||||| || ||| || | || || |||||||||||||| || |||||||||||
Sbjct 549 ATGCAGATCTTCGT-AAAGACTTTGACCGGAAAGACCATCACTCTTGAAGTTGAGAGCTC 607
Query 114 TGACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGACCA 173
|||||||| || || || ||||| ||||| |||||||||||||||||||||||||||||
Sbjct 608 CGACACCATTGATAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCA 667
Query 174 GCAGAGAT-TAATCTTCGCCGGTAAA-CAGCTAGAAGATGGTCGTACCTTGACCGATTAC 231
|||| | | | |||||||| || ||| ||||| || ||||| ||||| ||| |||| |||
Sbjct 668 GCAGCG-TCTCATCTTCGCTGG-AAAGCAGCTTGAGGATGGACGTACTTTGGCCGACTAC 725
Query 232 AATATCCAGAAAGAATCAACCCTCCACTTGGTTCTTCGT 270
|| |||||||| || || || || |||||||| || |||
Sbjct 726 AACATCCAGAAGGAGTCTACTCTTCACTTGGTCCTCCGT 764
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58333033290
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5