BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg487122

Length=581
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G03455.1 | Symbols: CDC25, ARATH;CDC25, ACR2 | Rhodanese/Cel...   880    0.0  


> AT5G03455.1 | Symbols: CDC25, ARATH;CDC25, ACR2 | Rhodanese/Cell 
cycle control phosphatase superfamily protein | chr5:862559-864108 
FORWARD LENGTH=633
Length=633

 Score =  880 bits (476),  Expect = 0.0
 Identities = 515/534 (96%), Gaps = 1/534 (0%)
 Strand=Plus/Plus

Query  1    GAGATATGGGGAGAAGCATATTTTCCTTTTTCACTAAGAAGaaaaaaaTGGCGATGGCGA  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  29   GAGATATGGGGAGAAGCATATTTTCCTTTTTCACTAAGAAGAAAAAAATGGCGATGGCGA  88

Query  61   GAAGCATCTCTTACATCACCTCTACGCAGCTTCTCCCTCTTCATCGTCGTCCCAACATCG  120
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  89   GAAGCATCTCTTACATCACCTCTACTCAGCTTCTCCCTCTTCATCGTCGTCCCAACATCG  148

Query  121  CCATCATCGATGTCAGGGATGAAGAGAGGAATTATGACGGGCATATAGCTGGGTCGCTAC  180
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct  149  CCATCATCGATGTCAGGGATGAAGAGAGGAATTATGACGGGCATATAGCTGGATCGCTAC  208

Query  181  ACTATGCAAGTGGCTCGTTTGATGACAAGATCTCTCATCTTGTTCAAAATGTCAAGGACA  240
            ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct  209  ACTATGCGAGTGGCTCGTTTGATGACAAGATCTCACATCTTGTTCAAAATGTCAAGGACA  268

Query  241  AAGACACACTTGTCTTCCATTGTGCTTTGAGCCAGGTTCGGGGTCCAACTTGTGCAAGAA  300
            ||||||||||||||||||||||||| |||||||||||||| || || |||||||| ||||
Sbjct  269  AAGACACACTTGTCTTCCATTGTGCCTTGAGCCAGGTTCGTGGCCCTACTTGTGCGAGAA  328

Query  301  GGCTCGTGAATTATCTCGATGAGAAGAAAGAAGATACTGGAATCAAAAACATCATGATCT  360
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct  329  GGCTCGTGAATTATCTTGATGAGAAGAAAGAAGATACTGGAATCAAAAACATCATGATCT  388

Query  361  TGGAACGCGGCTTTAATGGCTGGGAAGCTTCTGGAAAACCGGTCTGCCGCTGTGCAGACG  420
            |||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct  389  TGGAACGCGGCTTTAACGGTTGGGAAGCTTCTGGAAAACCGGTCTGCCGCTGTGCAGAGG  448

Query  421  TTCCTTGCAAAGGCGATTGTGCCTAAACCCTACTTAACCATATTGGGACCTAATTGATCT  480
            |||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct  449  TTCCTTGCAAGGGCGATTGCGCCTAAACCCTACTAAACCATATTGGGACCTAATTGATGT  508

Query  481  TCCACATTGTCATGTATTAAAGTTGAATGAAGATTTATCATAAATAATCTCTTA  534
            |||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct  509  TCCACATTGTCATGTACTAAAGTTGAATGAAGATT-ATCATAAATAATCTCTTA  561



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 27930185732


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5