BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487141
Length=2304
Score E
Sequences producing significant alignments: (Bits) Value
AT5G03620.1 | Symbols: | Subtilisin-like serine endopeptidase ... 3592 0.0
> AT5G03620.1 | Symbols: | Subtilisin-like serine endopeptidase
family protein | chr5:918738-921874 FORWARD LENGTH=2301
Length=2301
Score = 3592 bits (1945), Expect = 0.0
Identities = 2189/2308 (95%), Gaps = 11/2308 (0%)
Strand=Plus/Plus
Query 1 ATGGTTTCGAATCAGCGTTTACGGTTGTTTATACTCTGTTTTTGCCTTGTTAACACCGCA 60
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||
Sbjct 1 ATGGTTTCGAATCAGCGTGTACGGTTGTTTATGCTCTGTTTTTGCCTTGTTAACAACGCG 60
Query 61 TTTATAGCAGCCACGGAAGATGAAAACAACGAGAGAAAGCCTTACATTGTGTACATGGGA 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 61 GTTATAGCAGCCACGGAAGATGAAAACGTCGAGAGAAAGCCTTACATTGTGTACATGGGA 120
Query 121 GAAGCAACTGAGAATTCTCATGTTGAAGCCGCGGAAAACCATCACAATCTTCTATTGACA 180
|| || ||||||||||||| ||||||||| || ||||||||||| ||||||||| |||||
Sbjct 121 GAGGCCACTGAGAATTCTCTTGTTGAAGCTGCAGAAAACCATCATAATCTTCTAATGACA 180
Query 181 GTGATCGGAGATGAGAGCAAAGCAAGAGAAGTGAAAATGTATAGCTATGGGAAGAACATT 240
||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||| ||
Sbjct 181 GTGATCGGAGACGAGAGCAAAGCAAGAGAACTGAAAATCTATAGCTATGGGAAGAATATC 240
Query 241 AATGGATTTGTGGCAAGACTTTTTCCTCATGAAGCAGAGAAGCTATCACGCGAAGAAGGA 300
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 241 AATGGATTTGTGGCAAGACTGTTTCCTCATGAAGCAGAGAAGCTATCACGGGAAGAAGGA 300
Query 301 GTTGTATCGGTGTTTAAGAACACTCAAAGACAGCTTCACACTACAAGATCATGGGATTTT 360
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 301 GTTGTATCGGTGTTTAAGAACACTCAAAGACAGCTTCACACGACAAGATCATGGGACTTT 360
Query 361 CTAGGACTTGTTGAGTCTAAATACAAAAGAAGTGTAGCAATAGAGAGTAATATCATTGTG 420
||||||||||||||||||||||||||||||||||| | ||| || ||||| |||||||||
Sbjct 361 CTAGGACTTGTTGAGTCTAAATACAAAAGAAGTGTTGGAATTGAAAGTAACATCATTGTG 420
Query 421 GGAGTTCTTGACACAGGAATCGATGTCGACTCACCGAGCTTTAATGACAAAGGCGTTGGC 480
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 421 GGAGTTCTTGACACAGGAATCGATGTTGAATCACCGAGCTTTAATGACAAAGGCGTTGGC 480
Query 481 CCTCCTCCAGCTAAATGGAAAGGAAAATGTGTAACTGGAAATAACTTTACTCGTTGCAAT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CCTCCTCCAGCTAAATGGAAAGGAAAATGTGTAACTGGAAATAACTTTACTCGTTGCAAT 540
Query 541 AATAAAGTAATTGGAGCAAAATACTTCCGCCTCCAA-CAAGAAGGCCTTCCCGATGGCGA 599
|||||||| ||||||||||| ||||||| | ||||| || ||||||||||| ||||||||
Sbjct 541 AATAAAGTGATTGGAGCAAAGTACTTCCACATCCAATCA-GAAGGCCTTCCTGATGGCGA 599
Query 600 GGGAGACTCTGCAGCGGATTACGATGGTCACGGGACTCACACATCTTCCACAATTGCCGG 659
||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 600 GGGAGACACTGCAGCAGATCACGATGGTCACGGGACTCACACATCTTCCACAATTGCCGG 659
Query 660 TGTTTCAGTCTCCAGCGCTAGCCTTTTCGGAATTGCAAACGGAACAGCTAGAGGTGGTGT 719
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 660 TGTTTCAGTCTCCAGCGCTAGCCTTTTCGGAATTGCAAACGGAACAGCTCGAGGTGGTGT 719
Query 720 TCCTTCTGCTCGAATAGCGGCTTATAAGGTGTGCTGGGACTCAGGATGTACAGACATGGA 779
|||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 720 TCCTTCTGCTAGAATAGCTGCATATAAGGTGTGCTGGGACTCAGGATGTACAGACATGGA 779
Query 780 CATGTTGGCGGCATTCGACGAGGCGATTTCTGATGGGGTCGATATAATATCAATTTCAAT 839
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 780 CATGTTGGCAGCATTCGACGAGGCGATTTCTGATGGGGTCGATATAATATCGATTTCAAT 839
Query 840 TGGAGGAGCCTCACTTCCGTTTTTCGAAGATCCAATCGCGATTGGAGCGTTTCACGCGAT 899
|||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 840 TGGAGGAGCCTCGCTTCCGTTTTTCGAAGATCCAATAGCTATTGGAGCGTTTCACGCGAT 899
Query 900 GAAGAGAGGGATCTTGACAATGTGTTCTGCAGGCAATAATGGCCCCGGTCTCTTTACGGT 959
||| |||||||||||||||| |||||| ||||| ||||| || || ||||||||||||||
Sbjct 900 GAAAAGAGGGATCTTGACAACGTGTTCCGCAGGTAATAACGGTCCTGGTCTCTTTACGGT 959
Query 960 TTCCAACCTCGCGCCGTGGGTAATGACTGTTGCGGCTAACTCACTCGACCGGAAGTTTGA 1019
||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 960 TTCGAACCTCGCGCCGTGGGTAATGACAGTCGCGGCTAACTCACTCGACCGGAAGTTTGA 1019
Query 1020 GACTGTTGTTAAACTCGGAAATGGCCTCACCGCATCTGGGATCTCTCTAAACGGATTCAA 1079
|||||||| ||||| |||||||| |||||||||||||| || |||||||||||||| ||
Sbjct 1020 AACTGTTGTCAAACTTGGAAATGGACTCACCGCATCTGGAATATCTCTAAACGGATTTAA 1079
Query 1080 TCCAAGAAAGAAAATGTATCCGTTAACAAGCGGTTCGCTTGCGTCTAACTTATCTGCAGG 1139
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1080 TCCAAGAAAGAAAATGTATCCGTTAACAAGCGGTTCGCTTGCATCTAACTTATCTGCAGG 1139
Query 1140 AGGCTATGGAGAGCCCAGTACTTGTGAGCCCGGGACATTAGGGGAAGATAAAGTGATGGG 1199
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1140 AGGCTATGGAGAGCCCAGTACTTGTGAGCCTGGGACATTAGGGGAAGATAAAGTGATGGG 1199
Query 1200 AAAGGTAGTTTACTGTGAAGCAGGACGCGAAGAAGGAGGCAATGGAGGTCAAGGTCAAGA 1259
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1200 GAAGGTAGTTTACTGTGAAGCAGGACGAGAAGAAGGAGGCAATGGAGGTCAAGGTCAAGA 1259
Query 1260 CCATGTTGTGAGAAGCTTAAAAGGAGCTGGTGTGATCGTTCAACTTCTAGAACCAACTGA 1319
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 CCATGTTGTGAGAAGTTTAAAAGGAGCTGGTGTGATCGTTCAACTTCTAGAACCAACTGA 1319
Query 1320 TATGGCCACTTCAACTCTCATAGCTGGATCTTATGTCTTCTTTGAAGACGGTACAAAGAT 1379
|||||| |||||||| ||||| ||||| |||||||| ||||| |||||||||||||||||
Sbjct 1320 TATGGCTACTTCAACGCTCATTGCTGGCTCTTATGTTTTCTTCGAAGACGGTACAAAGAT 1379
Query 1380 CACTGAATACATCAACTCCACCAAAAATCCTCAAGCTGTTATCTTTAAGACTAAA-ACAA 1438
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||
Sbjct 1380 CACTGAATACATCAACTCCACCAAAAATCCTCAAGCGGTTATCTTTAAGAC-AAAGACAA 1438
Query 1439 CCAAAATGTTAGCTCCATCGATTTCTTCCTTCTCAGCAAGAGGACCTCAACGAATAAGTC 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1439 CCAAAATGTTAGCTCCATCGATTTCTTCCTTCTCAGCAAGAGGACCTCAACGAATAAGTC 1498
Query 1499 CCAACATTCTCAAGCCTGACATATCAGCGCCAGGACTAAACATTCTCGCGGCATACTCGA 1558
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1499 CCAACATTCTCAAGCCTGACATATCAGCGCCGGGACTAAACATTCTCGCAGCATACTCGA 1558
Query 1559 AGCTAGCATCGGTAACCGGTTATCCAGACGACAATAGACGAACACTTTTCTCCATAATGT 1618
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1559 AGCTAGCATCGGTAACCGGTTATCCAGACGACAATAGACGAACACTGTTCTCCATAATGT 1618
Query 1619 CAGGAACATCAATGGCTTGTCCTCACGCAGCAGCTGCAGCAGCTTATGTCAAATCATTCC 1678
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1619 CAGGAACGTCAATGGCTTGTCCTCACGCAGCAGCTGCAGCAGCTTATGTCAAATCATTCC 1678
Query 1679 ATCCTGATTGGTCTCCAGCCGCTATTAAATCCGCCCTTATGACAACAGCTACTCCTATGA 1738
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1679 ATCCTGATTGGTCTCCAGCCGCAATCAAATCCGCCCTTATGACAACAGCTACTCCTATGA 1738
Query 1739 GAATCAAAGGCAACGAAGCAGAACTAAGTTACGGGTCGGGTCAAATCAACCCGAGAAGAG 1798
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 1739 GAATCAAAGGCAACGAAGCAGAATTAAGTTACGGGTCGGGTCAAATTAACCCGAGAAGAG 1798
Query 1799 CGATTCACCCGGGTCTAGTCTACGACATCACAGAGGACGCATACCTAAGATTCCTCTGTA 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1799 CGATTCACCCGGGTCTAGTCTACGACATCACAGAGGACGCATACCTAAGATTCCTATGTA 1858
Query 1859 AAGAAGGGTATAATAGCACAAGCATCGGACTTTTAATCGGCAATAACAAG-AACAACACT 1917
|||||||||| ||||||||||||||||||||||||| |||| |||||| | |||||||||
Sbjct 1859 AAGAAGGGTACAATAGCACAAGCATCGGACTTTTAACCGGCGATAACA-GCAACAACACT 1917
Query 1918 ACGACGAAGAAAGAATACAAATGCGAGAATTTCAAGCGAGGGTTAGGATCCGACGGGTTA 1977
|||| | |||||||||||| || |||||| |||||||||||||||| ||||||||||||
Sbjct 1918 ACGA--A-GAAAGAATACAATTGTGAGAATATCAAGCGAGGGTTAGGTTCCGACGGGTTA 1974
Query 1978 AATTATCCGTCAATGCACAAGCAAGTGACTTCTACGGATACC-AAAGTGTCGGAGGTTTT 2036
|||||||||||| ||||||||||||||| ||||||||| | | ||||||||||| |||||
Sbjct 1975 AATTATCCGTCACTGCACAAGCAAGTGAATTCTACGGA-AGCGAAAGTGTCGGAAGTTTT 2033
Query 2037 CTATAGAACAGTGAGGAATGTGGGATACGGACCATCGACCTACGTGGCTAGGGTTTGGGC 2096
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2034 CTATAGAACAGTGACGAATGTCGGATACGGACCATCGACCTACGTGGCTAGGGTTTGGGC 2093
Query 2097 ACCGAAGGGTTTGAGAGTGGAGGTTGTGCCTAAAGTTATGAGTTTCGAGAGGCCTGGAGA 2156
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||
Sbjct 2094 ACCGAAGGGTTTGAGAGTTGAGGTTGTGCCTAAGGTTATGAGTTTCGAGAGGCCTAAAGA 2153
Query 2157 GAAGAAGAATTTTAAGGTTGTGATTGATGGAGTTTGGGATGAGACGATGAAAGGGATTGT 2216
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2154 GAAGAGGAATTTTAAGGTTGTGATTGATGGAGTTTGGGATGAGACAATGAAAGGGATTGT 2213
Query 2217 GTCTGCTTCTGTGGAATGGGATGATTCCAGAGGACATGTTGTTAGAAGCCCAATTCTGTT 2276
||||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||
Sbjct 2214 GTCTGCTTCTGTGGAATGGGATGATTCGAGAGGACATCTTGTGAGAAGTCCAATTCTGTT 2273
Query 2277 GTTTCGATCGGATAACGATTACCGTTAA 2304
||||||||||||||||||||||||||||
Sbjct 2274 GTTTCGATCGGATAACGATTACCGTTAA 2301
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114356841510
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5