BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487191
Length=2383
Score E
Sequences producing significant alignments: (Bits) Value
AT5G04130.1 | Symbols: GYRB2 | DNA GYRASE B2 | chr5:1121828-112... 3832 0.0
AT3G10270.1 | Symbols: GYRB1 | DNA GYRASE B1 | chr3:3173580-317... 1236 0.0
> AT5G04130.1 | Symbols: GYRB2 | DNA GYRASE B2 | chr5:1121828-1128091
REVERSE LENGTH=2515
Length=2515
Score = 3832 bits (2075), Expect = 0.0
Identities = 2294/2398 (96%), Gaps = 22/2398 (1%)
Strand=Plus/Plus
Query 1 AAAAACAAAATTTGAAGCAGAAGAAAAACCTCTTATGAGTTTCTAAATTCCATGGCGCTT 60
||||||||||||||||| |||||||||||||| |||| ||| |||| ||||||||||
Sbjct 14 AAAAACAAAATTTGAAGAAGAAGAAAAACCTC---TGAGCTTC-CAATTTCATGGCGCTT 69
Query 61 CTTCAGAGAGCTTCTTATCTGCG---------TTTACGGCTCATGGCTTCTCGACCTCGT 111
||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 70 CTTCAGAGAGCTTCTTATCTGCGTCTCTATTATTTACGGCTCATGGGTTCTCGACCTCGT 129
Query 112 CTCTTCTCTAGCTCTCTGTCTCCTGCTCTTCGCCGTCACAGCTCATTC-CTCTCCTCGCC 170
||||||||||||||||| ||||||||||||| |||||||||||| | |||||||||||
Sbjct 130 CTCTTCTCTAGCTCTCTCTCTCCTGCTCTTCACCGTCACAGCTC-GACGCTCTCCTCGCC 188
Query 171 TCCATTTTCCTCTCCAAGTCCCAGTTTCAGGTTAAAGTTTCAGTTTACCAATGTTCTGAA 230
||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct 189 TCCATTTTCCTCTCCAAGTCCCAGTTTCAGGTTAAAGTTTCAGTTAACCAGTGTTTTGAG 248
Query 231 TCAAAGACTGATACAACGAAATGCTGTTTCATCGAGGTTCTTGTCTACTGAGGCTTCCCA 290
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 249 TCAAAGACTGATACAACGAAATGCTATTTCATCGAGGTTCTTGTCTACTGAGGCTTCCCA 308
Query 291 AGAGACTACCACATCCAAGGGTTACAGTTCTGAGCAGATTCAAGTGCTGGAAGGCTTAGA 350
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 309 AGAGACTACCACATCTAAGGGTTACAGTTCTGAACAGATTCAAGTGCTGGAAGGCTTAGA 368
Query 351 CCCTGTCAGAAAACGGCCAGGAATGTATATAGGAAGCACTGGACCTCGTGGTTTGCACCA 410
|||||| |||||||| |||||||||||||| |||||||||||| ||||||||||||| ||
Sbjct 369 CCCTGTAAGAAAACGTCCAGGAATGTATATCGGAAGCACTGGATCTCGTGGTTTGCATCA 428
Query 411 TTTGGTTTATGAGATACTTGACAACGCAATTGATGAGGCTCAAGCTGGTTTTGCCTCAAA 470
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 429 TTTGGTTTATGAGATACTTGACAACGCAATTGATGAGGCTCAAGCTGGTTATGCCTCAAA 488
Query 471 GGTTGATGTCGTCCTGCATGCAGATGGCTCAGTCAGTGTTGTGGACAATGGGCGTGGGAT 530
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 489 GGTTGATGTCGTCCTACATGCAGATGGCTCAGTTAGTGTTGTGGACAATGGGCGTGGGAT 548
Query 531 ACCCACAGATTTGCATCCTGCTACCAAAAAA-TCTTCCCTGGAGACTGTGCTTACGGTTT 589
|||||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||||
Sbjct 549 ACCCACGGATTTGCATCCTGCGA-CAAAAAAGTCTTCCCTGGAGACTGTGCTTACGGTTT 607
Query 590 TACATGCAGGTGGCAAGTTTGGTGGCACGAGTAGTGGTTACAGTGTGTCTGGTGGATTAC 649
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 608 TACATGCGGGTGGCAAGTTTGGTGGCACGAGTAGTGGCTACAGTGTGTCTGGTGGATTAC 667
Query 650 ATGGTGTAGGTTTATCAGTAGTAAATGCTTTGTCTGAGGCTCTGGAGGTCACGGTTTGGA 709
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 668 ATGGTGTCGGTTTATCAGTAGTAAATGCTTTGTCTGAGGCTCTGGAGGTCTCGGTTTGGA 727
Query 710 GAGATGGGATGGAGCATAAGCAAAATTATTCACGTGGAAAGCCCATAACTACACTTACAT 769
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 728 GAGATGGGATGGAGCATAAGCAAAATTATTCTCGTGGAAAGCCCATAACTACACTTACAT 787
Query 770 GTCGTGTCCTCCCGCTAGAGTCAGAGAGGACTAAAGGGACAAGCATCAGGTTTTGGCCTG 829
|||| |||||||| ||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 788 GTCGCGTCCTCCCCCTAGAGTCAAAGGGGACTAAAGGGACAAGCATCAGGTTTTGGCCTG 847
Query 830 ACAAAGAAGTATTCACAACTGCAATTGAGTTCGACCATAACACCATTGCTGGACGAATTA 889
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 848 ACAAAGAAGTTTTCACAACTGCAATCGAGTTCGACCATAACACCATTGCTGGACGAATTA 907
Query 890 GGGAGCTTGCATTTCTGAATCCAAAGGTTACCATCTCTTTaaaaaaaGAGGATGATGATC 949
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 908 GGGAGCTTGCATTTTTGAATCCAAAGGTTACCATCTCTTTAAAAAAGGAGGATGATGATC 967
Query 950 CTGAAAAGAACCAATATAGTGAATATTCTTTTGCTGGAGGATTAACTGAATATGTTAGTT 1009
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 968 CTGAAAAGACCCAATATAGTGAATACTCTTTTGCTGGAGGATTAACTGAATATGTTAGTT 1027
Query 1010 GGCTAAATACTGATAAGAATCCAATTCATGACGTGCTGGGTTTCAGGAGAGAGATAAATG 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 GGCTAAATACTGATAAGAATCCAATTCATGACGTGCTGGGTTTCAGGAGAGAGATAAATG 1087
Query 1070 GTGCCACCGTGGACGTTGCCCTTCAATGGTGCTCAGATGCATATTCAGACACAATGCTGG 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1088 GTGCCACCGTGGACGTTGCCCTTCAATGGTGCTCAGATGCATATTCAGACACAATGCTGG 1147
Query 1130 GATATGCCAATAGCATTCGCACTATTGATGGTGGAACACACATCGAAGGTGTGAAAGCTT 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1148 GATATGCCAATAGCATTCGCACTATTGATGGTGGAACACACATCGAAGGTGTGAAAGCTT 1207
Query 1190 CATTAACAAGGACTCTTAATACCCTTGCAAAAAAGTCAAAGACTGTTAAGGAGAAGGATA 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1208 CATTAACAAGGACTCTTAATACCCTTGCAAAAAAGTCAAAGACTGTTAAGGAGAAAGATA 1267
Query 1250 TTAGCTTAAGCGGGGAACATGTTAGAGAGGGATTGACCTGTATTGTCTCAGTCAAGGTTC 1309
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1268 TTAGCTTAAGTGGGGAACATGTTAGAGAGGGATTGACCTGTATCGTCTCAGTCAAGGTTC 1327
Query 1310 CTAATCCTGAGTTTGAAGGTCAAACAAAGACAAGATTAGGAAATCCAGAGGTGAGAAAAA 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1328 CTAATCCTGAGTTTGAAGGTCAAACAAAGACAAGATTAGGAAATCCAGAGGTGAGAAAAA 1387
Query 1370 TTGTTGACCAATCAGTTCAGGAGTATCTCACAGAGTTTTTGGAATTGCATCCAGATGTTC 1429
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 1388 TTGTTGACCAATCAGTTCAGGAATATCTCACAGAGTTTTTGGAATTGCATCCAGATATTC 1447
Query 1430 TTGAGAGCATTATTTCCAAATCCCTGAACGCTTACAAGGCTGCTTTGGCTGCCAAGAGGG 1489
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1448 TTGAGAGCATTATTTCCAAATCCCTTAACGCTTACAAGGCTGCTTTGGCTGCCAAGAGGG 1507
Query 1490 CAAGGGAGTTGGTCAGGTCGAAAAGTGTTTTGAAGTCATCATCACTTCCTGGGAAACTGG 1549
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1508 CAAGGGAGTTGGTCAGGTCGAAAAGCGTTTTGAAGTCATCATCACTTCCTGGGAAACTGG 1567
Query 1550 CTGATTGCTCATCAACAGATCCTGAAGAATCTGAGATTTTTATAGTCGAAGGAGATTCTG 1609
||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||
Sbjct 1568 CTGATTGCTCATCAACAGATCCTGAAGTATCTGAAATTTTTATAGTTGAAGGAGATTCTG 1627
Query 1610 CTGGTGGCAGTGCGAAACAGGGCCGTGACAGACGTTTTCAGGCGATTCTTCCTTTGAGAG 1669
|||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct 1628 CTGGTGGCAGTGCGAAACAGGGCCGTGATAGACGATTTCAGGCAATTCTTCCTTTGAGAG 1687
Query 1670 GTAAAATTCTGAACATTGAAAGAAAGGATGAAGCAGCCATGTATAAGAATGAAGAAATTC 1729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1688 GTAAAATTCTGAACATTGAAAGAAAGGATGAAGCAGCCATGTATAAGAATGAAGAAATTC 1747
Query 1730 AAAATCTAATTCTTGGCCTTGGCCTCGGTGTGAAGGGAGAAGACTTTAAGAAAGAAAATT 1789
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1748 AAAATCTAATTCTTGGCCTTGGCCTCGGTGTGAAGGGAGAAGATTTTAAGAAAGAAAATT 1807
Query 1790 TGCGGTACCATAAGATAATTATCTTAACAGATGCAGATGTTGATGGTGCACATATCCGGA 1849
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1808 TGCGGTACCATAAGATAATCATCTTAACAGATGCAGATGTTGATGGTGCACATATCCGGA 1867
Query 1850 CACTTCTGTTGACCTTTTTCTTCAGATATCAGAGAGCCTTGTTTGATGCGGGTTGCATAT 1909
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1868 CACTTCTGTTGACCTTTTTCTTCAGATATCAGAGAGCCTTGTTTGATGCAGGTTGCATAT 1927
Query 1910 ATGTCGGTGTTCCTCCTCTATTCAAGGTTGAAAGGGGGAAACA-TGCACATTATTGCTAT 1968
||||||||||||||||||| ||||||||||||||||| ||| | |||||| |||||||||
Sbjct 1928 ATGTCGGTGTTCCTCCTCTGTTCAAGGTTGAAAGGGG-AAAGAATGCACAATATTGCTAT 1986
Query 1969 GATGATGCAGACCTTCAAAAGATCACCAGTAATTTCCCTGCAAACGCATCCTACAACATT 2028
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1987 GATGATGCAGACCTTAAAAAGATCACCAGTAACTTCCCTGCAAACGCATCCTACAACATT 2046
Query 2029 CAAAGGTTCAAAGGTTTGGGAGAGATGATGCCTGAACAGCTTTGGGAAACAACAATGAAT 2088
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2047 CAAAGGTTCAAAGGTTTGGGAGAGATGATGCCTGAACAGCTTTGGGAAACGACAATGAAT 2106
Query 2089 CCAGAAACAAGGATATTAAAGCAACTTGTGGTCGATGATATAGCGGAAGCAAACATGACA 2148
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2107 CCAGAAACAAGGATACTAAAGCAACTTGTTGTCGATGATATAGCGGAAGCAAACATGACA 2166
Query 2149 TTCTCATCTCTTATGGGTGCTCGGGTCGATGTCCGGAAAGAACTCATCAAAAATGCAGCA 2208
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2167 TTCTCATCTCTTATGGGTGCTCGGGTCGATGTCCGGAAAGAACTCATCAAAAATGCTGCA 2226
Query 2209 ACTAGGATCAATCTGCAGCGTCTCGACATATAACAGGAAACCGCTTGAGATTGGTGTCTA 2268
||||||||||| ||||||||||| |||||||||||||||||| |||||||||||| ||||
Sbjct 2227 ACTAGGATCAACCTGCAGCGTCTAGACATATAACAGGAAACCACTTGAGATTGGTCTCTA 2286
Query 2269 CAG-TTTCTTCATCTGGTAAGGGACATTAGATTATATATTTGTCAAAGGCGAACA-TGTC 2326
|| |||||||||||||| || |||||||||||||||||||||||||||| |||| | |
Sbjct 2287 CATATTTCTTCATCTGGTCAGAGACATTAGATTATATATTTGTCAAAGGCCAACAATCTT 2346
Query 2327 TTGTTC-TTTCTCTGGCCTAGAAAAAGTTACCACTGTTACAGTTGTGACTGTACAAAA 2383
||||| |||||||||||||| |||||| ||||| |||||| ||||||||||| ||||
Sbjct 2347 TTGTTTGTTTCTCTGGCCTAGCAAAAGTGACCACCGTTACAATTGTGACTGTAAAAAA 2404
> AT3G10270.1 | Symbols: GYRB1 | DNA GYRASE B1 | chr3:3173580-3179786
REVERSE LENGTH=2574
Length=2574
Score = 1236 bits (669), Expect = 0.0
Identities = 898/1011 (89%), Gaps = 6/1011 (1%)
Strand=Plus/Plus
Query 1236 TAAGGAGAAGGATATTAGCTTAAGCGGGGAACATGTTAGAGAGGGATTGACCTGTATTGT 1295
||| || ||||||||||||||||| |||||||||||||| || ||||||||||| |||||
Sbjct 1344 TAATGAAAAGGATATTAGCTTAAGTGGGGAACATGTTAGGGAAGGATTGACCTGCATTGT 1403
Query 1296 CTCAGTCAAGGTTCCTAATCCTGAGTTTGAAGGTCAAACAAAGACAAGATTAGGAAATCC 1355
||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||
Sbjct 1404 CTCAGTCAAGGTTCCGAACCCTGAGTTTGAAGGTCAAACAAAGACAAGACTAGGAAATCC 1463
Query 1356 AGAGGTGAGAAAAATTGTTGACCAATCAGTTCAGGAGTATCTCACAGAGTTTTTGGAATT 1415
|||||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||||
Sbjct 1464 AGAGGTGAGAAAAATTGTTGACCAATCAGTCCAGGAGTACCTCACGGAGTACTTGGAATT 1523
Query 1416 GCATCCAGATGTTCTTGAGAGCATTATTTCCAAATCCCTGAACGCTTACAAGGCTGCTTT 1475
|||||| ||||| ||||| |||||||||||||||||| |||| || |||||||||||| |
Sbjct 1524 GCATCCGGATGTACTTGAAAGCATTATTTCCAAATCCTTGAATGCGTACAAGGCTGCTCT 1583
Query 1476 GGCTGCCAAGAGGGCAAGGGAGTTGGTCAGGTCGAAAAGTGTTTTGAAGTCATCATCACT 1535
||||||||||||||| ||||||||||| || || ||||| |||||||||||||| |||||
Sbjct 1584 GGCTGCCAAGAGGGCTAGGGAGTTGGTAAGATCAAAAAGCGTTTTGAAGTCATCCTCACT 1643
Query 1536 TCCTGGGAAACTGGCTGATTGCTCATCAACAGATCCTGAAGAATCTGAGATTTTTATAGT 1595
|||||||||||| || ||||||||||| |||||||||| ||||||||||||||| || ||
Sbjct 1644 TCCTGGGAAACTTGCAGATTGCTCATCTACAGATCCTGCAGAATCTGAGATTTTCATTGT 1703
Query 1596 CGAAGGAGATTCTGCTGGTGGCAGTGCGAAACAGGGCCGTGACAGACGTTTTCAGGCGAT 1655
|||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| ||
Sbjct 1704 CGAAGGAGATTCGGCTGGTGGCAGCGCGAAACAGGGTCGTGACAGGCGTTTCCAGGCAAT 1763
Query 1656 TCTTCCTTTGAGAGGTAAAATTCTGAACATTGAAAGAAAGGATGAAGCAGCCATGTATAA 1715
||||||||||||||| |||||| |||| ||||| ||||||||||||||||| ||||||||
Sbjct 1764 TCTTCCTTTGAGAGGCAAAATTTTGAATATTGAGAGAAAGGATGAAGCAGCAATGTATAA 1823
Query 1716 GAATGAAGAAATTCAAAATCTAATTCTTGGCCTTGGCCTCGGTGTGAAGGGAGAAGACTT 1775
||| ||||||||||||||||| |||||||||||||| || || || ||||||||||| ||
Sbjct 1824 GAACGAAGAAATTCAAAATCTTATTCTTGGCCTTGGTCTTGGAGTTAAGGGAGAAGATTT 1883
Query 1776 TAAGAAAGAAAATTTGCGGTACCATAAGATAATTATCTTAACAGATGCAGATGTTGATGG 1835
||| || || ||| |||| |||||||| || || ||||||||||||||||||||||||||
Sbjct 1884 TAACAAGGAGAATCTGCGTTACCATAAAATTATCATCTTAACAGATGCAGATGTTGATGG 1943
Query 1836 TGCACATATCCGGACACTTCTGTTGACCTTTTTCTTCAGATATCAGAGAGCCTTGTTTGA 1895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1944 TGCACATATCCGGACACTTCTGTTGACCTTTTTCTTCAGATATCAGAGAGCCTTGTTTGA 2003
Query 1896 TGCGGGTTGCATATATGTCGGTGTTCCTCCTCTATTCAAGGTTGAAAGGGGGAAACATGC 1955
|||||||||||||| || |||||||| ||||| ||||||||||| ||||||||||| ||
Sbjct 2004 CGCGGGTTGCATATACGTTGGTGTTCCACCTCTTTTCAAGGTTGAGAGGGGGAAACAGGC 2063
Query 1956 ACATTATTGCTATGATGATGCAGAC-CTTCAAAAGATCACCAG-TAATTTCCCTGCAAAC 2013
|| || ||||| |||||||||| | ||| |||| ||||| | | ||||||| ||||
Sbjct 2064 GCACTACTGCTACGATGATGCAG-CTCTTAAAAAAATCACT-GCTTCGTTCCCTGGAAAC 2121
Query 2014 GCATCCTACAACATTCAAAGGTTCAAAGGTTTGGGAGAGATGATGCCTGAACAGCTTTGG 2073
||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||
Sbjct 2122 GCATCCTACAACATTCAGAGGTTCAAAGGTTTGGGTGAGATGATGCCTGCGCAGCTATGG 2181
Query 2074 GAAACAACAATGAATCCAGAAACAAGGATATTAAAGCAACTTGTGGTCGATGATATAGCG 2133
|||||||| ||||||||||| ||||||||||| |||||||| || || || || |||
Sbjct 2182 GAAACAACGATGAATCCAGATACAAGGATATTGAAGCAACTAGTTGTTGACGACGCAGCA 2241
Query 2134 GAAGCAAACATGA-CATTCTCATCTCTTATGGGTGCTCGGGTCGATGTCCGGAAAGAACT 2192
||| | || ||| | ||||||||||| ||||||||||||||||||||| |||| |||||
Sbjct 2242 GAAACGAATATGGTC-TTCTCATCTCTGATGGGTGCTCGGGTCGATGTCAGGAAGGAACT 2300
Query 2193 CATCAAAAATGCAGCAACTAGGATCAATCTGCAGCGTCTCGACATATAACA 2243
|||||||| ||| || |||||||| |||||| || |||||||||||||||
Sbjct 2301 CATCAAAAGTGCTGCGACTAGGATGAATCTGGAGAATCTCGACATATAACA 2351
Score = 1013 bits (548), Expect = 0.0
Identities = 889/1052 (85%), Gaps = 29/1052 (3%)
Strand=Plus/Plus
Query 198 CAGGTTAAAGTTTCAGTTTA-CCAATGTTCTGAATCAAAGAC-TGATACAACGAAATGCT 255
|||| ||||||||||| ||| |||||||| | | |||||||| || ||||| |||||||
Sbjct 201 CAGGATAAAGTTTCAG-TTAGCCAATGTTTTTAGTCAAAGACTTG-TACAAAGAAATGCG 258
Query 256 GTTTCA--TCGAGGTTCT-TGTC-T--A-C-T-GAGGCTTC-CCAAGAGA-CTACCACAT 304
|| ||| | | ||| | |||| | | | | ||| | || |||||||| || | || |
Sbjct 259 GTCTCACCTAAAAGTTTTATGTCATCGACCATGGAGTC-TCTCCAAGAGAGCT-CTACCT 316
Query 305 CCAAGGGTTACAGTTCTGAGCAGATTCAAGTGCTGGAAGGCTTAGACCCTGTCA-GAAAA 363
| |||| ||| ||||| ||||| || |||||| ||||||||||||||||||||| |||||
Sbjct 317 CTAAGGATTATAGTTCCGAGCACATCCAAGTGTTGGAAGGCTTAGACCCTGTCAGGAAAA 376
Query 364 CGGCCAGGAATGTATATAGGAAGCACTGGACCTCGTGGTTTGCACCATTTGGTTTATGAG 423
| || || |||||||| || ||||||||| ||||||||||||||||| |||||||||||
Sbjct 377 -GACCTGGGATGTATATTGGTAGCACTGGATCTCGTGGTTTGCACCATCTGGTTTATGAG 435
Query 424 ATACTTGACAACGCAATTGATGAGGCTCAAGCTGGTTTTGCCTCAAAGGTTGATGTCGTC 483
|| ||||||||||||||||| ||||| |||||||||||||| |||||| | || || ||
Sbjct 436 ATCCTTGACAACGCAATTGACGAGGCCCAAGCTGGTTTTGCTTCAAAGATCGACGTTGTT 495
Query 484 CTGCATGCAGATGGCTCAGTCAGTGTTGT-GGACAATGGGCGTGGGATACCCACAGATTT 542
| ||| |||||| |||||||| || | |||||||| ||||||||||||||||||||
Sbjct 496 TTACATTCAGATGATTCAGTCAGCATT-TCAGACAATGGACGTGGGATACCCACAGATTT 554
Query 543 GCATCCTGCTACCAAAAAATCTTCCCTGGAGACTGTGCTTACGGTTTTACATGCAGGTGG 602
||||||||| || |||||| || |||| ||||| |||||||| ||||||||||||||
Sbjct 555 GCATCCTGCAACGGGAAAATCGTCTTTGGAAACTGTCCTTACGGTCTTACATGCAGGTGG 614
Query 603 CAAGTTTGGTGGCACGAGTAGTGGTTACAGTGTGTCTGGTGGATTACATGGTGTAGGTTT 662
||||||||||||| ||||||||| ||||| |||||||||||||| ||||| ||||||||
Sbjct 615 TAAGTTTGGTGGCAAGAGTAGTGGGTACAGCGTGTCTGGTGGATTGCATGGCGTAGGTTT 674
Query 663 ATCAGTAGTAAATGCTTTGTCTGAGGC-TCTGGAGGTCACGGTTTGGAGAGATGGGATGG 721
||| || || ||||| ||||| ||||| | ||||||| | ||| | |||||||| ||||
Sbjct 675 ATCGGTTGTGAATGCATTGTCAGAGGCAT-TGGAGGTTATAGTTCGCAGAGATGGAATGG 733
Query 722 AGCATAAGCAAAATTATTCACGTGGAAAGCCCATAACTACACTTACATGTCGTGTCCTCC 781
|| | |||| || ||||| |||||||||||| |||| ||||||||||||| |||||| |
Sbjct 734 AGTTTCAGCAGAAGTATTCTCGTGGAAAGCCCGTAACAACACTTACATGTCATGTCCTAC 793
Query 782 CGCTAGAGTC-AGAGAGGACTAAAGGGACAAGCATCAGGTTTTGGCCTGACAAAGAAGTA 840
| | |||||| || | ||||| |||||||| ||||| |||| ||||||||||||||||||
Sbjct 794 CACCAGAGTCAAG-GGGGACTCAAGGGACATGCATCCGGTTCTGGCCTGACAAAGAAGTA 852
Query 841 TTCACAACTGCAATTGAGTTCGACCATAACACCATTGCTGGACGAATTAGGGAGCTTGCA 900
||||||||||||||| | |||||||||||||| ||||||||||| || |||||||||||
Sbjct 853 TTCACAACTGCAATTCAATTCGACCATAACACTATTGCTGGACGGATCAGGGAGCTTGCT 912
Query 901 TTTCTGAATCCAAAGGTTACCATCTCTTTaaaaaaaGAGGATGATGATCCTGAAAAGAAC 960
||||| |||||||||||||| |||||| ||||||| |||||||||||||| |||| | ||
Sbjct 913 TTTCTCAATCCAAAGGTTACAATCTCTCTAAAAAAGGAGGATGATGATCCAGAAAGGGAC 972
Query 961 CAATATAGTGAATATTCTTT-TGCTGGAGGATTAACTGAATATGTTAGTTGGCTAAATAC 1019
||||||||||||| ||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct 973 GTGTATAGTGAATATT-TTTATGCTGGAGGGTTAACTGAATATGTTAGCTGGCTAAATAC 1031
Query 1020 TGATAAGAATCCAATTCATGACGTGCTGGGTTTCAGGAGAGAGATAAATGG-TGCCACCG 1078
||||||||| || ||||||| |||||||||||| ||| |||||||||||| | ||||||
Sbjct 1032 TGATAAGAAACCGCTTCATGATGTGCTGGGTTTCCGGAAAGAGATAAATGGCT-CCACCG 1090
Query 1079 TGGACGTTGCCCTTCAATGGTGCTCAGATGCATATTCAGACACAATGCTGGGATATGCCA 1138
| |||||| | ||||| |||||||||||||| ||||||||||| ||||||||||| || |
Sbjct 1091 TTGACGTTTCACTTCAGTGGTGCTCAGATGCCTATTCAGACACGATGCTGGGATACGCGA 1150
Query 1139 ATAGCATTCGCACTATTGATGGTGGAACACACATCGAAGGTGTGAAAGCTTCATTAACAA 1198
|||| ||||| || || |||||||| ||||| || ||||||||||| |||||||||||||
Sbjct 1151 ATAGTATTCGGACCATAGATGGTGGGACACATATAGAAGGTGTGAAGGCTTCATTAACAA 1210
Query 1199 GGACTCTTAATACCCTTGCAAAAAAGTCAAAG 1230
| ||||| ||| ||||||||||||||| ||||
Sbjct 1211 GAACTCTAAATTCCCTTGCAAAAAAGTTAAAG 1242
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118322684565
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5