BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487203
Length=2113
Score E
Sequences producing significant alignments: (Bits) Value
AT5G04230.2 | Symbols: PAL3 | phenyl alanine ammonia-lyase 3 | ... 3027 0.0
AT3G10340.1 | Symbols: PAL4 | phenylalanine ammonia-lyase 4 | c... 1336 0.0
AT2G37040.1 | Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr... 459 7e-128
> AT5G04230.2 | Symbols: PAL3 | phenyl alanine ammonia-lyase 3
| chr5:1160634-1163898 FORWARD LENGTH=2485
Length=2485
Score = 3027 bits (1639), Expect = 0.0
Identities = 1968/2125 (93%), Gaps = 30/2125 (1%)
Strand=Plus/Plus
Query 1 ATGGAGTTTTGTCAACCAAACGCAACCGCAGCAGCATTGAGCGACCCACTTAACTGGAAT 60
||||||||| ||||||||||||| | | |||||||||||||||||||||||||||||
Sbjct 198 ATGGAGTTTCGTCAACCAAACGC-A----A-CAGCATTGAGCGACCCACTTAACTGGAAT 251
Query 61 GTAGCAGCGGAGGCTTTAAAAGGGAGCCACCTGGAGGAGGTGAAGAAGATGGTGAAGGAT 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 252 GTAGCGGCGGAGGCTTTAAAAGGGAGCCACCTGGAGGAGGTGAAGAAGATGGTGAAGGAT 311
Query 121 TATAGGAAAGGAACGGTGCAGCTCGGCGGAGAGACGCTGACCATCGGTCAGGTTGCGGCG 180
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 312 TATAGGAAAGGAACGGTGCAGCTAGGCGGAGAGACGCTGACCATCGGTCAGGTTGCGGCA 371
Query 181 GTGGCGAGTGGAGGAACGACAGTGGAGCTTTCTGAGGAGGCTCGTGCCGGTGTAAAGGCG 240
|| |||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||
Sbjct 372 GTAGCGAGTGGAGGACCGACAGTGGAGCTTTCTGAGGAGGCTCGGGGCGGTGTGAAGGCG 431
Query 241 AGTAGTGAGTGGGTGATGGAGAGCATGAATCGTGGTACCGACACTTATGGTATCACCACT 300
|||||||| |||||||||||||||||||| |||| ||| ||||| ||||| |||||||||
Sbjct 432 AGTAGTGACTGGGTGATGGAGAGCATGAACCGTGATACGGACACATATGGGATCACCACT 491
Query 301 GGATTTGGTTCATCTTCTCGTAGGAGGACTGACCAAGGTGCTGCTCTTCAAAAAGAGCTT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 492 GGATTTGGTTCATCTTCTCGTAGGAGGACTGACCAAGGTGCTGCTCTTCAAAAAGAGCTT 551
Query 361 ATTAGGTACTTGAACGCCGGGATATTCGCTACCGGCGACGGAGATGACGACACGTCAAAC 420
|||||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||||
Sbjct 552 ATTAGGTATTTGAACGCCGGGATATTCGCTACCGGCAACGAAGATGACGACAGGTCAAAC 611
Query 421 ACGCTTCCCCGGCTGGCTACAAGAGCGGCGATGCTCATCCGCGTAAACACCCTCCTCCAA 480
||||||||||||| |||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct 612 ACGCTTCCCCGGCCGGCTACTAGAGCAGCGATGCTCATCCGTGTAAACACCCTCCTCCAA 671
Query 481 GGCTACTCTGGTATACGCTTTGAGATACTCGAAGCCATCACAAAATTCCTCAACCGGAAA 540
|||||||||||||||||||||||||| |||||||||||||||| | |||||||| | |||
Sbjct 672 GGCTACTCTGGTATACGCTTTGAGATCCTCGAAGCCATCACAACACTCCTCAACTGCAAA 731
Query 541 ATCACACCGCTCCTCCCTCTCCGAGGCACCATTACCGCCTCCGGCGACCTCGTTCCATTA 600
|| ||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||
Sbjct 732 ATTACACCGCTCCTTCCTCTCCGAGGCACCATTACCGCCTCCGGGGATCTCGTTCCGTTA 791
Query 601 TCGTATATTGTTGGATTTCTCATCGGGCGCCCCAACTCACGATCTTTGGGCCCATCCGGC 660
|| ||||| | |||||| |||||||||||||||||||| ||||| ||||||| || |||
Sbjct 792 TCCTATATCGCTGGATTCCTCATCGGGCGCCCCAACTCCCGATCCGTGGGCCCCTCTGGC 851
Query 661 GAGATCCTCACCGCCTCGGAGGCCTTCAAGCTTGCCGGAGTATCATCCTTTTTCGAACTC 720
||||||||||| |||| ||||||||||||||| || |||||||| || |||||||||||
Sbjct 852 GAGATCCTCACTGCCTTGGAGGCCTTCAAGCTCGCTGGAGTATCGTCTTTTTTCGAACT- 910
Query 721 CA-GCCCAAGGAAGGGCTTGCGCTCGTGAATGGGACTGCGGTGGGATCTGCTTTAGCCTC 779
|| ||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 911 CAGGCCTAAAGAAGGGCTTGCGCTCGTGAATGGGACTGCGGTGGGGTCTGCTTTAGCCTC 970
Query 780 CACGTTACTGTACGATGCCAACATTTTGGCGGTTTT-TGCGGAGGTTGCTTCGGCCATGT 838
||| |||||||||||||||||||||||| |||||| | | || |||||||| |||||||
Sbjct 971 TACGGTACTGTACGATGCCAACATTTTGGTGGTTTTCT-CCGAAGTTGCTTCCGCCATGT 1029
Query 839 TTGCTGAGGTTATGCAGGGGAAACCGGAGTTTACGGATCATCTTACGCATAAACTCAAGC 898
|||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 1030 TTGCAGAGGTTATGCAGGGGAAACCAGAGTTTACCGATCATCTTACGCATAAACTCAAGC 1089
Query 899 ACCATCCTGGTCAGATAGAAGCCGCCGCAATCATGGAGCATA-TCTTAGACGGAAGCTCT 957
|||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||||
Sbjct 1090 ACCATCCTGGTCAGATCGAAGCCGCCGCTATCATGGAGCATATTC-TAGACGGAAGCTCT 1148
Query 958 TATGTCAAAGAAGCTCAACATCTCCACAAGATTGATCCGCTTCAGAAACCTAAAC-A-A- 1014
||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |
Sbjct 1149 TATGTAAAAGAAGCTCTACATCTCCACAAGATTGATCCGCTTCAGAAACCTAAACAAGAT 1208
Query 1015 --G-A---TC---GTTACGCTCTGCGAACGTCGCCGCAATGGCTCGGACCACAGATTGAG 1065
| | || |||||||||||||||| || ||||||||||| ||||| |||||||||
Sbjct 1209 CGGTATGTTCTTGGTTACGCTCTGCGAACATCTCCGCAATGGCTTGGACCGCAGATTGAG 1268
Query 1066 GTGATAAGAGCAGCGACAAAGATGATCGAACGTGAGATAAACTCGGTAAACGATAACCCT 1125
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 1269 GTGATAAGAGCAGCGACTAAGATGATCGAACGTGAGATAAACTCAGTAAACGATAACCCT 1328
Query 1126 TTGATCGATGTTTCACGGAACAAAGCTATTCACGGTGGGAATTTCCAGGGGACACCGATT 1185
||||||||||||||| | ||||||||||| || |||||||| |||||||||||||| |||
Sbjct 1329 TTGATCGATGTTTCAAGAAACAAAGCTATCCATGGTGGGAACTTCCAGGGGACACCAATT 1388
Query 1186 GGTGTCGCCATGGATAACACTCGTCTAGCACTTGCTTCGGTCGGGAAGCTAATGTTCGCT 1245
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1389 GGTGTCGCCATGGATAACACTCGTCTAGCACTTGCTTCTATCGGGAAGCTAATGTTCGCT 1448
Query 1246 CAGTTCACTGAACTCGTAAATGATTACTACAACAACGGGTTACCCTCTAATCTATCTGGC 1305
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1449 CAGTTCACTGAACTCGTAAATGATTTCTACAACAACGGGTTACCCTCTAATCTATCTGGT 1508
Query 1306 GGGAGAAACCCTAGTCTTGATTACGGGTTAAAAGGCGCAGAAGTAGCCATGGCTTCTTAT 1365
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1509 GGTAGAAACCCTAGTCTTGATTACGGGTTAAAAGGCGCAGAAGTCGCCATGGCTTCTTAT 1568
Query 1366 TGCTCAGAGCTTCAGTTCTTAGCTAATCCTGTGACGAACCATGTCGAAAGCGCCTCGCAA 1425
|||||||||||||||||| |||| ||||||||||||||||||||||||||||| || |||
Sbjct 1569 TGCTCAGAGCTTCAGTTCCTAGCAAATCCTGTGACGAACCATGTCGAAAGCGCTTCTCAA 1628
Query 1426 CACAATCAAGATGTTAACTCTCTTGGGCTGATCTCGAGCCGAAAGACAGCAGAAGCTGTG 1485
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1629 CACAATCAAGATGTTAACTCTCTTGGGCTGATCTCGAGCCGAACGACAGCAGAAGCTGTG 1688
Query 1486 GTTATCCTCAAGCTCATGTCAACAACTTACTTGGTAGCTTTGTGCCAAGCCTTTGATCTG 1545
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1689 GTTATCCTCAAGCTCATGTCAACGACTTACTTGGTAGCTTTGTGCCAAGCCTTTGATCTG 1748
Query 1546 AGACACCTTGAAGAAATTCTaaaaaaaGCGGTTAAGGAGGCTGTGAGCCAGACTGCCAAA 1605
|||||||||||||||||||| || ||||||||||| |||| ||||||||| |||||||||
Sbjct 1749 AGACACCTTGAAGAAATTCTCAAGAAAGCGGTTAATGAGGTTGTGAGCCACACTGCCAAA 1808
Query 1606 AGCGTTCTAGCTATCGAACCATTCCGCAAACACGACGACATTCTCCGAGTTGTCAACCGC 1665
||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1809 AGCGTTCTAGCAATCGAACCATTCCGCAAACACGACGATATTCTTGGAGTTGTCAACCGC 1868
Query 1666 GAATACGTCTTCTCCTATGTTGATGACCCAA-CTAGCCTCACTAACCCTCTAATGCAGAA 1724
||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||
Sbjct 1869 GAATACGTCTTCTCCTATGTTGATGACCCAAGC-AGCCTCACTAACCCTTTAATGCAGAA 1927
Query 1725 GCTGAGGCACGTCCTCTTCGACAAAGCTTTAGCTGAACTGGAAGGCGAGACAGACACGGT 1784
|||||| || |||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 1928 GCTGAGACATGTCCTCTTCGACAAAGCTTTAGCTGAACCGGAAGGCGAGACCGACACGGT 1987
Query 1785 TTTCCGAAAAATCGGAGCGTTCGAAGCCGAGCTGAAATCTCTCCTTCCTAAAGAAGTGGA 1844
||| || ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||
Sbjct 1988 TTTTCGGAAAATCGGAGCGTTCGAGGCCGAGCTGAAATTTCTCCTCCCTAAAGAAGTGGA 2047
Query 1845 AAGAGTCAGGACAGAGTACGAGAACGGTACATCTAATGTGGCTAACCGAATCAAGAAGTG 1904
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2048 ACGAGTCAGGACAGAGTACGAGAACGGTACATTTAATGTGGCTAACCGAATCAAGAAGTG 2107
Query 1905 TCGATCGTATCCGCTGTACCGGTTTGTGCGAGAC-GAACTCGAGACTAGGTTGCTAACCG 1963
|||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct 2108 TCGATCGTATCCGCTGTACCGGTTTGTGCG-GAATGAACTCGAGACGAGGTTGCTAACCG 2166
Query 1964 GAGAGAATGTCCGGTCACCAGGAGAGGATTTTGACAAAGTCTTCACAGCGATCTCTCAAG 2023
||||| |||| |||||||| ||||||||||||||||||||||||| || || |||||||
Sbjct 2167 GAGAGGATGTTCGGTCACCGGGAGAGGATTTTGACAAAGTCTTCAGGGCTATATCTCAAG 2226
Query 2024 GCAAACTCATAGACCCTCTGTTCGAATGTCTCAAAGAGTGGAACGGAGCTCCGATTCCTC 2083
| ||||||||||| |||||||| |||||||| |||||||||||||| ||||||||| ||
Sbjct 2227 GAAAACTCATAGATCCTCTGTTTGAATGTCTGAAAGAGTGGAACGGTGCTCCGATTTCTA 2286
Query 2084 TCTGCTAGAACGTT-CACTCAGATC 2107
||||||| |||||| | |||||||
Sbjct 2287 TCTGCTAAAACGTTTCG-TCAGATC 2310
> AT3G10340.1 | Symbols: PAL4 | phenylalanine ammonia-lyase 4 |
chr3:3204013-3208022 FORWARD LENGTH=2584
Length=2584
Score = 1336 bits (723), Expect = 0.0
Identities = 1643/2075 (79%), Gaps = 112/2075 (5%)
Strand=Plus/Plus
Query 73 GCTTTAAAAGGGAGCCACCTGGAGGAGGTGAAGAAG-ATGGTGAAGGATTATAGGAAAGG 131
||||| ||||||||||||||||| |||||||| | | |||||||| || ||||||||| |
Sbjct 323 GCTTTGAAAGGGAGCCACCTGGATGAGGTGAA-ACGAATGGTGAAAGAGTATAGGAAA-G 380
Query 132 A-ACGGTGCAGCTCGGCGGAGAGACGCTGACCATCGGTCAGGTTGCGGCGGTGGC--GA- 187
| ||||| || | || || ||||| |||| || ||||| || || || ||||| ||
Sbjct 381 AGGCGGTGAAGTTAGGAGGTGAGACTTTGACGATTGGTCAAGTAGCCGCCGTGGCTAGAG 440
Query 188 GTGGAGGA--A-CGACAGTGGAGCTTTCTGAGGAGGCTCGTGCCGGTGTAAAGGCGAGTA 244
| |||||| | | || |||||||| | ||||||||||||||||| || ||||||||||
Sbjct 441 GAGGAGGAGGATCTACGGTGGAGCTAGCGGAGGAGGCTCGTGCCGGAGTCAAGGCGAGTA 500
Query 245 GTGAGTGGGTGATGGAGAGCATGAATCGTGGTACCGACACTTATGGTA-TCACCACTGGA 303
| || |||||||||||||||||||| || || || |||| |||||| | | ||||| ||
Sbjct 501 GCGAATGGGTGATGGAGAGCATGAACCGAGGAACGGACAGTTATGG-AGTTACCACAGGG 559
Query 304 TTTGGTTCATCTTCTCGTAGGAGGACTGACCAAGGTGCTGCTCTTCAAAAAGAGCTTATT 363
|||||| || |||| | ||| || || | ||||| | ||| |||||||| |||||||||
Sbjct 560 TTTGGTGCAACTTCCCATAGAAGAACCAAACAAGGCGGTGCACTTCAAAATGAGCTTATT 619
Query 364 AGGTACTTGAACGCCGGGATA-TTCGCTACCGGCGACGGAGATGACGACACGTCAAACAC 422
|||| |||||| ||||| ||| || || |||||| | | | | ||||||||| ||||
Sbjct 620 AGGTTCTTGAATGCCGGAATATTTGGC-CCCGGCG-CCG-G--G--GACACGTCACACAC 672
Query 423 GCTT-CCCCGGCTGGCTACAAGAGCGGCGATGCTCATCCGCGTAAACACCCTCCTCCAAG 481
| || || || | | ||||||||||| |||||| |||| || ||||| ||||||||||
Sbjct 673 G-TTGCCAAAGCCGACAACAAGAGCGGCAATGCTCGTCCGTGTCAACACTCTCCTCCAAG 731
Query 482 GCTACTCTGGTATACGCTTTGAGATACTCGAAGCCATCACAAA-ATTCCTCAACC-GGAA 539
||||||| ||||||||||| ||||| |||||||| || ||||| || ||||||| | |
Sbjct 732 GCTACTCCGGTATACGCTTCGAGATTCTCGAAGCAATTACAAAGCTT-CTCAACCACG-A 789
Query 540 AATCACACCGCT-CCTCCCTCTCCGAGGCACCATTACCGCCTCCGGCGACCTCGTTCCAT 598
|||||| ||| | |||||||||||| |||||||| ||||||||||| ||||| ||||| |
Sbjct 790 AATCACTCCG-TGCCTCCCTCTCCGTGGCACCATCACCGCCTCCGGTGACCTTGTTCC-T 847
Query 599 -TATCGTATATTGTTGGATTTCTCATC-GGGCGCCCCAACT-CACGATCTTTGGG-CCCA 654
| || || || | ||| |||||| | || || ||||||| || | | |||| |||
Sbjct 848 CTCTCTTACATCGCCGGACTTCTCA-CTGGCCGTCCCAACTCCA-AAGCCGTGGGTCCC- 904
Query 655 TCCGGCGAGATC-CTCACCGCCTCGGAGGCCTTCAAGCTTGCCGGAGTATCATCCTTTTT 713
|| || |||| | ||||| ||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct 905 TCTGGTGAGA-CTCTCACTGCCTCTGAGGCCTTTAAGCTCGCCGGAGTATCGTCCTTTTT 963
Query 714 CGAACTCCAGCCCAAGGAAGGGCTTGCGCTCGTGAATGGGACTGCGGTGGGATCTGCTTT 773
||| || ||||| |||||||| || || || ||||| ||||| ||||| ||||| | |||
Sbjct 964 CGAGCTGCAGCCTAAGGAAGGACTAGCACTTGTGAACGGGACAGCGGTTGGATCGGGTTT 1023
Query 774 AGCCTCCAC-GTTACTGTACGATGCCAACATTTTGGCGGTTTT-TGCGGAGGTTGCT-TC 830
||||| || ||| ||| |||||| || |||||||| ||||| | |||| ||| | ||
Sbjct 1024 GGCCTCAACGGTT-TTGTTCGATGCAAATATTTTGGCTGTTTTAT-CGGAAGTT-ATGTC 1080
Query 831 GGCCATGTTTGCTGAGGTTATGCAGGGGAAACCGGAGTTTACGGATCATCTTACGCATAA 890
|||||||| || ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1081 TGCCATGTTCGCAGAGGTTATGCAAGGGAAACCGGAGTTTACAGATCATCTTACGCATAA 1140
Query 891 ACTCAAGCACCATCCTGGTCAGATAGAAGCCGCCGCAATCATGGAGCATATCTTAGACGG 950
|||||||||||||| |||||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct 1141 GCTCAAGCACCATCCCGGTCAGATCGAAGCCGCCGCAATTATGGAACATATATTAGACGG 1200
Query 951 AAGCTCTTATGTCAAAGAAGCTCAACATCTCCAC-AAGATTGATCCGCTTCAGAAACCTA 1009
||||||||| || ||||||||||||| ||||||| || || ||||| ||||| |||||||
Sbjct 1201 AAGCTCTTACGTTAAAGAAGCTCAACTTCTCCACGAA-ATGGATCCTCTTCAAAAACCTA 1259
Query 1010 AACAAGATCGTTACGCTCTGCGAACGTCGCCGCAATGGCTCGGACCACAGATTGAGGTGA 1069
|||||||||| |||||| | || ||||| || |||||||| || || |||||||| ||||
Sbjct 1260 AACAAGATCGGTACGCTTTACGTACGTCACCACAATGGCTTGGGCCGCAGATTGAAGTGA 1319
Query 1070 TAAGAGCAGCGAC-AAAGATGATCGAACGTGAGATAAACTCGGTAAACGATAACCCTTTG 1128
| ||||| || || ||| ||||| || |||||||| ||||| || || ||||||||||||
Sbjct 1320 TCAGAGCGGCTACTAAA-ATGATTGAGCGTGAGATCAACTCTGTTAATGATAACCCTTTG 1378
Query 1129 ATCGATGTTTC-ACGGAACAAAGCTATT-CACGGTGGGAATTTCCAGGGGACACCGATTG 1186
|| ||||| || | ||||||| || || |||||||| |||||||| ||||||||||| |
Sbjct 1379 ATAGATGTGTCGA-GGAACAAGGC-GTTGCACGGTGGAAATTTCCAAGGGACACCGATCG 1436
Query 1187 GTGTCGCCATGGATAACACTCGTCTAG-CACTTGCTTCGGTCGGGAAGCTAATGTTCGCT 1245
|||| ||||||||||| | ||||||| || ||||||| | ||||| || ||||| ||
Sbjct 1437 GTGTTGCCATGGATAATTCCCGTCTAGCCA-TTGCTTCCATTGGGAAACTCATGTTTGCG 1495
Query 1246 CAGTTCACTGAACTCGTAAATGATTACTACAACAACGGGTTACCCTCTAATCTATCTGGC 1305
||||| ||||||| || || |||| ||||||||| || || || ||||||||||||||
Sbjct 1496 CAGTTTTCTGAACTAGTGAACGATTTCTACAACAATGGTTTGCCTTCTAATCTATCTGGT 1555
Query 1306 GGGAGAAACCCTAGTCTTGATTACGGGTTAAAAGGCGCAGAAGTAGCCATGGCTTCTTAT 1365
||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||
Sbjct 1556 GGGAGAAACCCTAGTCTTGATTACGGGTTTAAAGGCGCGGAAATAGCCATGGCTTCTTAT 1615
Query 1366 TGCTCAGAGCTTCAGTTCTTAGCTAATCCTGTGACGAACCATGTCGAAAGCGCCTCGCAA 1425
||||| |||||||||||| | |||||||| ||||| ||||||||| ||||||| |||
Sbjct 1616 TGCTCCGAGCTTCAGTTCCTGGCTAATCCCGTGACCAACCATGTCCAAAGCGCAGAGCAG 1675
Query 1426 CACAATCAAGATGTTAACTCTCTTGGGCTGATCTCGAGCCG-AAAGACAGCAGAAGCTGT 1484
|| || ||||| ||||| || || ||||| ||||| ||| | ||| || |||||||| ||
Sbjct 1676 CATAACCAAGACGTTAATTCCCTAGGGCTAATCTCTAGCAGGAAA-ACTGCAGAAGCAGT 1734
Query 1485 GGTTATCCTCAAGCTCATGTCAACAACTTACTTGGTAGCT-TTGTGCCAAGCCTTTGATC 1543
|| |||||||||||| ||||| ||||| ||||| || || || ||||||||| ||||||
Sbjct 1735 GGATATCCTCAAGCTAATGTCCACAACCTACTTAGTCGCGCTT-TGCCAAGCCGTTGATC 1793
Query 1544 TGAGACACCTTGAAGA-AATTCTaaaaaaaGCGGTTAAGG-AGGCTGTGAGCCAGACTGC 1601
| ||||| |||||||| ||| || || || |||||||| || | ||||| ||| ||
Sbjct 1794 TAAGACATCTTGAAGAGAAT-CTGAAGAAGGCGGTTAAATCAG-CAGTGAGTCAGG-TGG 1850
Query 1602 CAAAA-GCGT-T---C--TAGCT---ATCGA--A-C--CATTCCG-CAAA---CAC-GA- 1640
| ||| | || | | | | | | || | | ||| ||| ||| ||| ||
Sbjct 1851 CGAAACGGGTCTTAACCGTTGGTGCCAACGGGGAGCTACAT-CCGTCAAGGTTCACAGAA 1909
Query 1641 CGACAT-TC-TCCGAGTTGTCAACCGCGAATACGTCTTCTCCTATGTTGATGA-CCCAAC 1697
|| || || ||| ||| || |||| || ||||| ||||| || | || || ||| |
Sbjct 1910 CGTGATGTCCTCCAAGTGGTTGACCGAGAGTACGTGTTCTCATACGCAGACGATCCCTGC 1969
Query 1698 TAGCCTCACTAACCCTCTAATGCAGAAGCTGAGGCACGTCCTCT-TCGACAAAGCTTTAG 1756
||||||||| |||| ||||||||||| || || ||| | || | | ||| | |||||||
Sbjct 1970 -AGCCTCACTTACCCGCTAATGCAGAAACTTAGACACATTCT-TGTAGACCACGCTTTAG 2027
Query 1757 CTGAACTGGAAGGCGAGAC-A-----G--ACA-CGGTTTTCCGA-AAAATCGGAGCGTTC 1806
| || | ||| ||||| | | | ||| ||||||||| | ||||||||||| ||
Sbjct 2028 CGGATCCAGAACGCGAGGCCAATTCCGCGACATCGGTTTTCC-ACAAAATCGGAGCTTTT 2086
Query 1807 GAAGCCGAGCTGAAATCT-CTCCTTCCTAAAGAAGTGGAAAGAGTCAGGACAGAGTACGA 1865
||||||||||||||| || || || ||||||||||| ||| | ||| || || |||||
Sbjct 2087 GAAGCCGAGCTGAAA-CTGCTTCTCCCTAAAGAAGTAGAACGCGTCCGGGTTGAATACGA 2145
Query 1866 G-AACGGTACATCTAATGTGGCTAACCGAATCAAG-AAGTGTCGATCGTATCCGCTGTAC 1923
| || || ||||| | | |||||||| || ||| || ||||| || ||||| ||||
Sbjct 2146 GGAA-GGAACATCGGCTATAGCTAACCGGATTAAGGAA-TGTCGGTCTTATCCATTGTAT 2203
Query 1924 CGGTTTGTGCGAGACGAACTCGAGACT-AGGTTGCTAACCGGAGAGAATGTCCGGTCACC 1982
|||||||| || || || || | ||| | | ||| || ||||||||||| ||||| ||
Sbjct 2204 CGGTTTGTCCGCGATGAGCTAAATACTGAACT-GCTTACTGGAGAGAATGTTCGGTCGCC 2262
Query 1983 AGGAGAGGATTTTGACAAAGTCTTCACAGCGATCTCTCAAGGCAAACTCATAGACCC-TC 2041
||||||||| ||||| ||||| ||| |||||| ||| | || ||||| || || || |
Sbjct 2263 AGGAGAGGAGTTTGATAAAGTGTTCTTAGCGATTTCTGATGGAAAACTTATTGATCCGT- 2321
Query 2042 TGTTCGAATGTCTCAAAGAGTGGAACGGAGCTCCG 2076
|||| ||||||||||| ||||||||||||||||||
Sbjct 2322 TGTTGGAATGTCTCAAGGAGTGGAACGGAGCTCCG 2356
> AT2G37040.1 | Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557376-15560363
REVERSE LENGTH=2530
Length=2530
Score = 459 bits (248), Expect = 7e-128
Identities = 996/1349 (74%), Gaps = 84/1349 (6%)
Strand=Plus/Plus
Query 202 GTGGAGCTTTCTGAGGA-GGCTCGTGCCGGTGTAAAGGCGAGTAGTGAGTGGGTGATGGA 260
|||||||| || || || ||| | |||||||| || || |||||||| ||||| |||||
Sbjct 391 GTGGAGCTATCGGA-GACAGCTAGAGCCGGTGTGAATGCTAGTAGTGATTGGGTTATGGA 449
Query 261 GAGCATGAATC-GTGGTACCGACACTTATGGTATCACCACTGGATTTGGTTCAT-CTTCT 318
||| ||||| | || || || | ||||||| | || ||||| |||||| | | |||||
Sbjct 450 GAGTATGAA-CAAAGGCACTGATAGTTATGGTGTTACTACTGGTTTTGGTGC-TACTTCT 507
Query 319 CGTAGGAGGACTGACCAA-GGTGCT-GCTCTTCAAAAAGAGCTTATTAG-GTACTTGAAC 375
| | |||| || | || |||| | || ||||| || || |||||||| | ||| |||
Sbjct 508 CATCGGAGAAC-CAAAAACGGTG-TCGCACTTCAGAAGGAACTTATTAGATTCCTT-AAC 564
Query 376 GCCGGGATATTCGCTACCGGCGACGGAGATGACGACACGTCAAACACGCTT-CCCCGGCT 434
||||| ||||||| | || || || | || ||| | | |||| || || | ||
Sbjct 565 GCCGGAATATTCG-GA--AGC-AC-GA-AAGA-AACAAG-C-CACAC-ATTGCCAC-ACT 613
Query 435 -GGCTACAAGAGCGGCGATGCTCATCCGCGTAAACACCCTCCTCCAAGGCTACTCTGGTA 493
|| |||||||| || ||||| | || | ||||| ||||||||||| | || ||||
Sbjct 614 CCGCCACAAGAGCCGCCATGCTTGTACGAATCAACACTCTCCTCCAAGGATTTTCCGGTA 673
Query 494 TACGCTTTGAGATACTCGAAGCCATCACAAAATTCCTCAACCGGAAAATCACACCGCTC- 552
| || |||||||| |||||||| || || | ||||||||| || ||||| || ||
Sbjct 674 TCCGATTTGAGATTCTCGAAGCAATTACCAGTTTCCTCAACAACAACATCACTCC-ATCT 732
Query 553 CTCCCTCTCCGAGGCACCATTACCGCCTCCGGCGACCTCGTTCCAT-TATCGTATATTGT 611
||||| ||||| || || || ||||||||||| || |||||||| | | || || || |
Sbjct 733 CTCCCCCTCCGTGGTACAATCACCGCCTCCGGAGATCTCGTTCC-TCTCTCCTACATCGC 791
Query 612 TGGATTTCTCATCGGGCGCCCCAACT-CACGATCT-TTGGGCCCATCCGGCG-AGATCCT 668
||| |||||| ||| || ||||| | || | || ||| |||| ||| | || | |
Sbjct 792 CGGACTTCTCACCGGTCGTCCCAATTCCA-AAGCTACTGGTCCCA-ACGGTGAAGCT-TT 848
Query 669 CACCGCCTCGGAGGCCTTCAAGCTT-GCCGGAGTATCA--TCC---TT-TTTCGAACTCC 721
|| || ||| || ||||| || || ||| |||| ||| || ||| || ||||
Sbjct 849 AACAGCAGAGGAAGCTTTCAA-ATTAGCAGGA--ATCAGCTCCGGATTCTTT-GATCTCC 904
Query 722 AGCCCAAGGAAGGGCTTGCGCTCGTGAATGGGACTGCGGTGGGATCTGCTTTAGCCTCCA 781
|||| |||||||| || ||||| || ||||| || ||||| ||||||| | || || |
Sbjct 905 AGCCTAAGGAAGGTCTCGCGCTAGTCAATGGCACGGCGGTTGGATCTGGAATGGCGTCAA 964
Query 782 CGTTACTGTACGATGCCAACATTTTGGCGGTTTTTGCGGAGGTTGCT-TCGGCCATGTTT 840
| | | | ||| | || || | | ||||| || ||| || | ||||| | |||
Sbjct 965 TGGTGTTATTCGAAACGAATGTTCTCTCTGTTTTGGCTGAGATT-TTGTCGGCGGT-TTT 1022
Query 841 -GCTGAGGTTATGCAG-GGGAAACCGGAGTTTACGGATCATCTTACGCATAAACTCAAGC 898
|| ||||| ||| || || || || ||||| || |||||||| || || | ||| || |
Sbjct 1023 CGCAGAGGTGATG-AGTGGTAAGCCTGAGTTCACCGATCATCTCACTCACAGACTTAAAC 1081
Query 899 ACCATCCTGGTCAGATAGAAGCCGCCGCAATCATGGAGCATATCTTAGACGGAAGCTCTT 958
| ||||| ||||| || ||||| || || || |||||||||||| | ||||||||||| |
Sbjct 1082 ATCATCCCGGTCAAATCGAAGCGGCGGCGATAATGGAGCATATCCTCGACGGAAGCTCGT 1141
Query 959 ATGTCAAAGAAGCTCA-ACATCTCCACAAGATTGATCCGCTT-CAGAAACCTAAACAAGA 1016
| | ||| |||||| | | || ||| |||| |||||| || |||||||||||||||||
Sbjct 1142 ACATGAAATTAGCTCAGA-AGCTTCACGAGATGGATCCG-TTACAGAAACCTAAACAAGA 1199
Query 1017 TCGTTACGCTCTGCGAACGTCGCCGCAATGGCTCGGACCACAGATTGAGGTGATAAG--A 1074
|||||||||||| || || || || |||||| | || || || || || ||||| | |
Sbjct 1200 TCGTTACGCTCTTCGTACTTCTCCTCAATGGTTAGGTCCTCAAATCGAAGTGATCCGTTA 1259
Query 1075 GCAGCGACAAAGAT-GATCGAACGTGAGATAAACTCGGTAAACGATAACCCTTTGATCGA 1133
| || || || || |||||| |||||||| ||||| || |||||||| || ||||||||
Sbjct 1260 -C-GCAACGAA-ATCGATCGAGCGTGAGATTAACTCCGTCAACGATAATCCGTTGATCGA 1316
Query 1134 TGTTTC-ACGGAACAAAGCTATTCACGGTGGGAATTTCCAGGGGACACCGATTGGTGTCG 1192
|||||| | ||||||| || ||||||||||| || ||||| || ||||| || || ||
Sbjct 1317 TGTTTCGA-GGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAACACCAATCGGAGTTT 1375
Query 1193 CCATGGATAACACTCG-TCTAGC-ACTTGCTTCGGTCGGGAAGCTAATGTTCGCTCAGTT 1250
| ||||||||||| | | | || | | || || | || || || ||||| ||||| ||
Sbjct 1376 CAATGGATAACACGAGAT-TGGCGA-TAGCAGCGATTGGTAAACTCATGTTTGCTCAATT 1433
Query 1251 CACTGAACTCGTAAATGATTACTACAACAACGGGTTACCCTCTAATCTATCTGGCGG-GA 1309
| | || || || ||||||| ||||||||| || |||||||| |||||| | | | ||
Sbjct 1434 CTCAGAGCTTGTGAATGATTTCTACAACAATGGTTTACCCTCGAATCTAACCG-CTTCGA 1492
Query 1310 GAAACCCTAGTCTTG-ATTACGGGTTAAAAGGCGCAGA-AGTAGCCATGGCTTCTTATTG 1367
| || || ||| ||| |||| || || || || || || | | || ||||||||||||||
Sbjct 1493 GGAATCCAAGT-TTGGATTATGGATTCAAGGGAGCTGAGATT-GCAATGGCTTCTTATTG 1550
Query 1368 CTCAGAGCTTCAGTTCTTAGCTAATCCTGTGACGAACCATGT-CGAAAGC-GCCTCGCAA 1425
||||||||||| | |||||||||||||||||| | |||||| | || | || ||||
Sbjct 1551 TTCAGAGCTTCAATACTTAGCTAATCCTGTGACTAGCCATGTTC-AAT-CAGCAGAGCAA 1608
Query 1426 CACAATCAAGATGTTAACTCTCTTGGG-CTGATCTCGAGC-CG-AAAGACAGCAGAAGCT 1482
|| || |||||||| |||||| ||||| || |||||| | || ||| || | ||||||
Sbjct 1609 CATAACCAAGATGTCAACTCT-TTGGGACTAATCTCGT-CTCGCAAA-ACTTCTGAAGCT 1665
Query 1483 GTGGTTATCCTCAAGCTCATGTCAACAAC 1511
|| | ||| |||||||| |||||||||||
Sbjct 1666 GTTGATATTCTCAAGCTTATGTCAACAAC 1694
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104768537415
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5