BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487210
Length=4431
Score E
Sequences producing significant alignments: (Bits) Value
AT5G04290.1 | Symbols: KTF1, SPT5L | kow domain-containing tran... 2089 0.0
> AT5G04290.1 | Symbols: KTF1, SPT5L | kow domain-containing transcription
factor 1 | chr5:1196069-1202653 FORWARD LENGTH=4482
Length=4482
Score = 2089 bits (1131), Expect = 0.0
Identities = 1363/1470 (93%), Gaps = 35/1470 (2%)
Strand=Plus/Plus
Query 2966 AAAAGGATGATGGAGGATCATCGTGGGGTAAGAAGGACGATGGAGGATCTTCTTGGGGCA 3025
||||||||||||||||||| | |||||| || ||||| ||||||||||||||||||||||
Sbjct 3044 AAAAGGATGATGGAGGATCGTTGTGGGGAAAAAAGGATGATGGAGGATCTTCTTGGGGCA 3103
Query 3026 AAAAGGACGATGGAGGATC-TTCTTGGGGCAAAAAGGACGATGGGGGATCGTTGTGGGGT 3084
|| |||| ||||||||||| || ||||| || ||||| ||||| | ||||| |||||||
Sbjct 3104 AAGAGGATGATGGAGGATCGTT-GTGGGGTAAGAAGGATGATGGAGAATCGTCGTGGGGT 3162
Query 3085 AAAAAGGATGATGGAGGATCTTCTTGGGGCAAAAAGGATGATGGAGGATCATCGTGGGGT 3144
|| ||||||||||||| ||| || ||||| || ||||||||||||||||| |||||||||
Sbjct 3163 AAGAAGGATGATGGAGAATCGTCGTGGGGTAAGAAGGATGATGGAGGATCGTCGTGGGGT 3222
Query 3145 AAGAAGGATGAGGGAGGGTACTCAGAACAAACATTTGATAGGGGAGGACGTGGGTTTGGT 3204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3223 AAGAAGGATGAGGGAGGGTACTCAGAACAAACATTTGATAGGGGAGGACGTGGGTTTGGT 3282
Query 3205 GGGAGAAGAGGAGGAGGTCGTCGAGGTGGCAGGGATCAGTTTGGGAGGGGAAGCTCCTTC 3264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3283 GGGAGAAGAGGAGGAGGTCGTCGAGGTGGCAGGGATCAGTTTGGGAGGGGAAGCTCCTTC 3342
Query 3265 AGTAATTCTGAGGATCCGGCTCCATGGAATAAACCAAGTGGCGGATCTAGCTGGGGCAAG 3324
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3343 GGTAATTCTGAGGATCCGGCTCCATGGAGTAAACCAAGTGGCGGATCTAGCTGGGGCAAG 3402
Query 3325 CAAGATAGTGATGGGGGCGGTTCAAGCTGGGGTAAAGAGAATGATACTGGTGGTGGATCT 3384
|||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3403 CAAGATGGCGATGGGGGCGGTTCAAGCTGGGGTAAAGAGAATGATGCTGGTGGTGGATCT 3462
Query 3385 GGCTGGGGAAAGCAAGACAGTGGTGGTGGTGGTTCAAGCTGGGGTAAACAGAACGATGCT 3444
|||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| |
Sbjct 3463 AGCTGGGGAAAGCAAGACAATGGTG-T--TGGTTCAAGCTGGGGTAAACAGAACGATGGT 3519
Query 3445 AGTGGTGGTGGATCGAGCTGGGGCAAGCAGAATAATGCTGGTGGCGGATCTAGCTGGGGC 3504
|||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 3520 AGTGGTGGTGGATCTAGCTGGGGCAAGCAGAATGATGCTGGTGGGGGATCTAGCTGGGGC 3579
Query 3505 AAGCAAGACACTGGTGGGGATGGTTCGAGCTGGGGTAAACAGGATGGTGGTGGT-AGTAG 3563
|||||||||| ||||||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct 3580 AAGCAAGACAGTGGTGGGGATGGTTCGAGCTGGGGTAAGCAGGATGGTGGTGGTGA-TAG 3638
Query 3564 TGGTTCTGGTTGGGGTAAGCAGAACAATGCTAGTGGTGGATCAAGCTGGGGCAAGCAGAG 3623
|||||||| ||||||||||||||||||| ||||||||||||| |||||||| ||||||||
Sbjct 3639 TGGTTCTGCTTGGGGTAAGCAGAACAATACTAGTGGTGGATCGAGCTGGGGAAAGCAGAG 3698
Query 3624 TGATGCTGGTGGGGGATCTAGCTGGGACAAGCAAGACGGTGGTGGGGGTGGTTCAAGCTG 3683
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3699 TGATGCTGGTGGGGGATCTAGCTGGGGCAAGCAAGACGGTGGTGGGGGTGGTTCAAGCTG 3758
Query 3684 GGGCAAACAAGATGGTGGTGGTGGCAGTGGTTCTGCCTGGGGTAAGCAGAACGATACTAG 3743
||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 3759 GGGTAAACAAGATGGTGGTGGAGGCAGTGGTTCTGCCTGGGGTAAGCAGAACGAGACTAG 3818
Query 3744 TGGTGGATCATCGAGCTGGGGGAAGCAGAATGACTCTGGTGGAGGATCTAGTTGGGGAAA 3803
|||||| ||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct 3819 CAATGGATC---GAGCTGGGGGAAGCAGAATGATTCTGGTGGAGGATCAAGCTGGGGAAA 3875
Query 3804 GCAAGAtggtggtgggggtggttcaagctggggtaaaccggataacgatggtggtggtgg 3863
|||||||||||||||||||||||||||||||||||||| | | | |||||||||||||||
Sbjct 3876 GCAAGATGGTGGTGGGGGTGGTTCAAGCTGGGGTAAACAG-A-A-CGATGGTGGTGGTGG 3932
Query 3864 tggATCGAGTTGGGGCAAGCAGGGTGATGGTGGTTCTAAACCTTGGAATGAACAGAGTGG 3923
| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3933 -G--TCGAGCTGGGGCAAGCAGGGTGATGGTGGTTCTAAACCTTGGAATGAACATAGTGG 3989
Query 3924 TGGTGGTCGTGGGTTTGGTGGAAGTAGGGGAGGAGGGGGATTCCGAGGAGGTTTCCGTGG 3983
|||||||||||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct 3990 TGGTGGTCGTGGGTTTGGTGAAAGAAGGGGAGGAGGGGGATTCCGTGGAGGT-------- 4041
Query 3984 AGGCAGAAACCAATCAGGTAGAGGAGGAAGGTCGTTTGATGGTGATCAATCATCTAGCTG 4043
|| | || ||||||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct 4042 AG--A-AA-CCAATCAGGCAGAGGAGGAAGGTCGTTTGATGGTGGTCGATCATCTAGCTG 4097
Query 4044 GAAAACAGACAATCAAGAAAACACTTGGAAGAGCGACCAAAGTGGTGGATCAGACTGGAA 4103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4098 GAAAACAGACAATCAAGAAAACACTTGGAAGAGCGACCAAAGTGGTGGATCAGACTGGAA 4157
Query 4104 AAAAGGGTGGGGAGAGGATTCAAACAATAGCAAACCATCTGGTTCGTCCT-CTGGTGGTG 4162
|||||| |||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct 4158 AAAAGGTTGGGGAGAGGATTCAAACAATAGCAAACCATCCGGTTCGTC-TGCTGGTGGTT 4216
Query 4163 GTGCTGGAAACTGGCCTAGCTGGGATACTAACTCAAA-AAGAGAAACCAATGATAAACCG 4221
||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||
Sbjct 4217 GTGCTGGAAACTGGCCTAGCTGGGATACTAACTCAAAGAA-AGAAACCAATGACAAACCG 4275
Query 4222 GGAGACGAAAGCAAATCAGCTTGTTGGGGGACCAGTAACGATCAGGCGAATACCGATATC 4281
|||||||| |||||||||||||| ||| |||||||||||||||| ||||||||||| |
Sbjct 4276 GGAGACGATAGCAAATCAGCTTG--GGGA-ACCAGTAACGATCAGGTGAATACCGATAAC 4332
Query 4282 AACAATGACACTTGGAACAAAAAGCCAAACAATGATGTCGGAACGAGTGGAGAAGCTGAT 4341
|||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 4333 AACAATGACAGTTGGAACAAAAAGCCAAACAATGATGTTGGAACAAGTGGAGAAGCTGAT 4392
Query 4342 AATGCATGGGGCGGCAACACAAATGCAGAAGTGCCTTCACCAAGTGGCTCGGCAGCGTGG 4401
||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||
Sbjct 4393 AATGCATGGGGCGGCAAAACAAATGCAGTAGCGCCTTCACCAAGTGGCTCGGCAGCGTGG 4452
Query 4402 GGAACCGGTGACaaaaaaaCTGGATGGTAA 4431
|||||||||||||||||||| |||||||||
Sbjct 4453 GGAACCGGTGACAAAAAAACCGGATGGTAA 4482
Score = 1984 bits (1074), Expect = 0.0
Identities = 1185/1239 (96%), Gaps = 6/1239 (0%)
Strand=Plus/Plus
Query 1 ATGGATCGCAAGGGAAAGGGTAAACAGGTCGCCGGGGA-TGAATCGTCTTCCGGCGGAAA 59
||||||||||||||||||||||||||||||||| || | ||| |||| |||||||||| |
Sbjct 1 ATGGATCGCAAGGGAAAGGGTAAACAGGTCGCC-GGTAGTGATTCGTATTCCGGCGGACA 59
Query 60 GAAAAGGAAAAACACTGTCGAATTCAGAGATGAAGGTTTGAGGATTAAGAAGCGGAATAA 119
||||||||||||| | |||||||||||||||||||||||||||||||||||||| || ||
Sbjct 60 GAAAAGGAAAAACTCCGTCGAATTCAGAGATGAAGGTTTGAGGATTAAGAAGCGCAAAAA 119
Query 120 CCCTGGGGTTCTTCAGTTCTTCGAAGAATCTGCTGAAGTTGGCTACTACGGAGGCAGCTC 179
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 120 CCCTGAGGTTCTTCAGTTCTTCGAAGAATCAGCTGAAGTTGGCTACTACGGAGGCAGCTC 179
Query 180 CGACGAAGATGATGACGGATTAGGTTTCCTTAACGATATGGAAGACGAACCTGAGGTGGA 239
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 180 CGACGAAGATGATGACGGATTAGGTTTCCTTAACGATATGGAAGACGAGCCTGAGGTGGA 239
Query 240 AGAGAGTGGTAAGCCTGGCAAGGGAGAAAAGGGCAAAGCATCCTTTGTTTTTCCTAAGGA 299
||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 240 AGAGAGTAGTAAGGCTGGCAAGGGAGAAAAGGGCAAATCATCCTTTGTTTTTCCCAAGGA 299
Query 300 AGAAGATATT-AACGAGGAAGAATTTGATAGAATGATGGAAGAAAGATACAAGCCAGGTT 358
||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 300 AGAAGAT-TTAAACGAGGAGGAATTTGATAGAATAATGGAAGAAAGATACAAGCCAGGTT 358
Query 359 CTGGTTTTCTTCGATATGCTGATGATGATGTGAAAGATGCCATTGAGATGGATGCTCTTG 418
||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 359 CTGGTTTTCTTAGATATGCTGATGATGATATCAAAGATGCCATTGAGATGGATGCTCTTG 418
Query 419 CTCCATCTTCCAAGGATCCTCCTATATGGAAAGTCAAGTGTGCGATTGGACGGGAGAGGC 478
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 419 CTCCAACCTCCAAGGATCCTCCTATATGGAAAGTCAAGTGTGCGATTGGACGGGAGAGGC 478
Query 479 GATCCGCTTTCTGTCTCATGCACAAATTTGTTGAGCTGAAAAAGATAGGCACCAAATTGC 538
|||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 479 GATCCGTTTTCTGTCTCATGCACAAATTTGTTGAGCTGAGAAAGATAGGCACCAAATTGG 538
Query 539 AGATCATATCTGTTTTTTCTTTGGACCATGTCAAGGGTTTCATTTTCATAGAAGCGGACA 598
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 539 AGATCATATCTGTTTTTTCTGTGGACCATGTCAAAGGTTTCATTTTCATAGAAGCGGACA 598
Query 599 AGGAACATGATGTTCTTGAGGCCTGCAAGAGTTTAACTGGTATATACGCTACTCGGATGG 658
|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 599 AGGAACATGATGTTCTTGAGGCATGCAAGAGTTTAGTTGGTATATACGCTACTCGGATGG 658
Query 659 TGTTACTTCCTAAAGCCGAAACTCCAAATCTGCTAACTGTCCAAAGaaaaactaaaaaaG 718
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 659 TGTTACTTCCTAAAGCCGAAACTCCAAATCTGCTAACTGTCCAAAAAAAAACTAAAAAAG 718
Query 719 TTTCTGAGGGAACATGGGCTCGTGTTAAGAATGGCAAATACAAAGGAGATCTTGCTCAGA 778
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 719 TTTCTGAGGGAACATGGGCTCGTGTTAAGAATGGTAAATACAAAGGAGATCTTGCTCAGA 778
Query 779 TTGTGGCTGTGAGTGACACTAAGAGTAAAGCATTAATAAAGTTAATTCCGAGGATCGATA 838
|||||||||||||||||||| || ||||||| |||||||| ||||||||||||| ||||
Sbjct 779 TTGTGGCTGTGAGTGACACTCGGAATAAAGCACTAATAAAGCTAATTCCGAGGATTGATA 838
Query 839 TTCAGGCCTTGACCCAAAAATATGGTGGGGGAGTTACTGTCCAAAAAGGCCAGTCTCCAG 898
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 839 TTCAGGCCTTGACCCAGAAATATGGTGGGGGAGTTACTGTCCAAAAAGGCCAGACTCCAG 898
Query 899 CTCCAAGATTGATCAGTTCAAGCGAGCTCGAGGAGTTCAGACCTCTCATTCAAGTGAGGC 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 CTCCAAGATTGATCAGTTCAAGCGAGCTCGAGGAGTTCAGACCTCTCATTCAAGTGAGGC 958
Query 959 GAGATCGTGATACTGGAATAACTTTTGAGCATCTTGATAG-CATGATGCTGAAAGATGGG 1017
|||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||
Sbjct 959 GAGATCGTGATACTGGAATAACTTTTGAACATCTTGATAGTC-TGATGCTGAAAGATGGG 1017
Query 1018 TATCTCTATAAGAAAGTTTCCTTAGATTCAATATCTTCCTGGGGGGTTATACCATCGAAG 1077
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 1018 TATCTCTATAAGAAAGTATCCTTAGATTCAATATCTTCCTGGGGGGTTATACCAACGAAG 1077
Query 1078 GAGGAGATACTAAAATTTACGCCTGTAGACCGAAAAGAAACTGGTGATGTAGAGTGGATC 1137
|| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 GATGAGTTACTAAAATTTACGCCTGTAGACCGAAAAGAAACTGGTGATGTAGAGTGGATC 1137
Query 1138 TCAGAAATTTATGGTGAAGAAAGGAAGAAAAAGATTCTTCCAACCGGCAGAGGGGGTGGG 1197
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 1138 TCAGAAATTTATGGTGAAGAAAGGAAGAAAAAGATTCTTCCAACCTGCAGAGAGGGTGGG 1197
Query 1198 AAAGGAGAAGGATCAGGGGGTGGAAAAGGAGAAGGTTCA 1236
||||||||||||||||||||||||||||||||||| |||
Sbjct 1198 AAAGGAGAAGGATCAGGGGGTGGAAAAGGAGAAGGATCA 1236
Score = 1266 bits (685), Expect = 0.0
Identities = 938/1050 (89%), Gaps = 58/1050 (6%)
Strand=Plus/Plus
Query 2132 GCAGGAGAGTCTCAATGTTGAATGTATCATGGTTTAACTGTACCGTGAGAACTGAGAAGA 2191
||| |||||||||||| ||||| ||| ||||||| |||||| || | ||||||||
Sbjct 2136 GCATGAGAGTCTCAATATTGAACGTAACATGGTTCAACTGTGCC----G---TGAGAAGA 2188
Query 2192 ACCCAT--GG-GGCAGTAAGCCTACGTCTGACGTCTGGCCGACAGTTGCAGATGATAATA 2248
|||||| || ||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 2189 ACCCATGGGGCGGCAGTAAGCCTACGTCTGACGTCTCGCCAACAGTTGCAGATGATAATA 2248
Query 2249 CTTCAACATGGGCCAATGCAGCAGCTGAGAACAAACCTGCCTCGGCTAGTGATCAACCTG 2308
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2249 CTTCAGCATGGGCCAATGCAGCAGCTGAGAACAAACCTGCCTCGGCTAGTGATCAACCTG 2308
Query 2309 GTGGTTGGGATTCCTGGGTTAAAACACCTGCTTCTGAAGCTGGCACTGTTAGTGGGTGGG 2368
|||||||| || |||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct 2309 GTGGTTGGAATCCCTGGGGTAAAACACCTGCTTCTGAAGCTGGCACTGTTAGTGGATGGG 2368
Query 2369 GAGATACAAGTGCTTCAAATGTTGAAGCTTCTTCGTGGGGAAAACAAGGAGCTTCTACTT 2428
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2369 GAGATACAAGTGCTTCAAATGTTGAAGCTTCTTCGTGGGAAAAACAAGGAGCTTCTACTT 2428
Query 2429 CCAATGTTGCAGATTCAGGTTCCTGGGGTATGCATGGTGGAAGCTCTGGTGGTAATAAGC 2488
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2429 CCAATGTTGCAGATTTAGGTTCCTGGGGTACGCATGGTGGAAGCTCTGGTGGTAATAAGC 2488
Query 2489 AAGATGAGGACTCAGTATGGGGTAAACTATGTGAAGCTTCTGAATCGAGTCAGAAGAAAG 2548
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2489 AAGATGAGGACTCGGTATGGGGTAAACTATGTGAAGCTTCTGAATCAAGTCAGAAGAAAG 2548
Query 2549 AAGAATCGTCTTGGGGTAAGAAAGGGGGATCTGAATCTGGTTTGGGAACGGGAGATGGAG 2608
||||||||||||||||||||||||||||||| | | | |||||
Sbjct 2549 AAGAATCGTCTTGGGGTAAGAAAGGGGGATC--A----G-------A--------TGGAG 2587
Query 2609 AATCTAGTTGGGCCAACAAAGATGGAAATTCCAGCGCAAGTAACAAAGATGGAGTTTCCT 2668
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2588 AATCTAGTTGGGGAAACAAAGATGGAAATTCCAGCGCAAGTAAGAAAGATGGAGTTTCCT 2647
Query 2669 GGGGACAACAGGAGAAAGGCTCTGATGGGAGCAAGGGAGGATCTGCATGGGGTAATCAAG 2728
||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||||
Sbjct 2648 GGGGACAACAGGATAAAGGCTCTGACGAGAGCAAGGGAGGATCTGCATGGAGTAATCAAT 2707
Query 2729 GTGGAGGTTTTGGTTCAGGAGA-GAAAAAAGATGGTTCTTCTGGTTGGAACAAGTCAGCA 2787
|||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 2708 GTGGAGATTTTGGTTCAGG-GAAGAAAAAAGATGGTTCTTCTGGTTGGAACAAGTCAGCA 2766
Query 2788 GAAGATTCCAATGCCAATAGTAAGGGTGTTCCTGGCTGGGGT-AAGCCAGATGGTGGCTC 2846
|||||||||||||||||||||||||| ||||||| |||||| || ||| ||| ||||||
Sbjct 2767 GAAGATTCCAATGCCAATAGTAAGGGAGTTCCTGACTGGGGCCAA-CCAAATGATGGCTC 2825
Query 2847 TTCATGGGGTAAACAGGATAAGCAAGACGGAGTGGCATCGTGGGGTAAAAAGGATGACGG 2906
||||||||||||| ||| | | | ||||| |||||||||||||||||||||||||||
Sbjct 2826 TTCATGGGGTAAAAAGGGT--G-A---CGGAGCGGCATCGTGGGGTAAAAAGGATGACGG 2879
Query 2907 AGGCTCGTGGGGTAATAAGGATGACGG-A----G--T-AT-------CATCGTGGGGTAA 2951
||||||||||||||| ||||||||||| | | | || |||||||||||||
Sbjct 2880 AGGCTCGTGGGGTAAAAAGGATGACGGTAATAAGGATGATGGAGGATCATCGTGGGGTAA 2939
Query 2952 GAAAGATGACGGTCAAAAGGATGATGGAGGATCATCGTGGG-GTAAGAAGGACGATGGAG 3010
|||||||||||||||||||||||| |||||||| || |||| | || ||| |||||||
Sbjct 2940 GAAAGATGACGGTCAAAAGGATGACGGAGGATCGTCTTGGGAGAAA-AAGTTTGATGGAG 2998
Query 3011 GATCTTCTTGGGGCAAAAAGGACGATGGAGGATCTTCTTGGGGCAAAAAGGACGATGGGG 3070
|||| || ||||| || ||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 2999 GATCATCATGGGGTAAGAAGGACGATGGAGGATCTTCTTGGGGCAAAAAGGATGATGGAG 3058
Query 3071 GATCGTTGTGGGGTAAAAAGGATGATGGAGGATCTTCTTGGGGCAAAAAGGATGATGGAG 3130
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3059 GATCGTTGTGGGGAAAAAAGGATGATGGAGGATCTTCTTGGGGCAAAGAGGATGATGGAG 3118
Query 3131 GATCATCGTGGGGTAAGAAGGATGAGGGAG 3160
|||| | |||||||||||||||||| ||||
Sbjct 3119 GATCGTTGTGGGGTAAGAAGGATGATGGAG 3148
Score = 1262 bits (683), Expect = 0.0
Identities = 835/903 (92%), Gaps = 31/903 (3%)
Strand=Plus/Plus
Query 1188 AGGGGGTGGGAAAGGAGAAGGATCAGGGGGTGGAAAAGGAGAAGGTTCATCAGAATTT-A 1246
||||||||| ||||||||||| ||| ||||||||||||||||||||||||||| |||| |
Sbjct 1236 AGGGGGTGGAAAAGGAGAAGGGTCAAGGGGTGGAAAAGGAGAAGGTTCATCAG-ATTTCA 1294
Query 1247 AGTCAGAAAGTAGCTATGAGTTATATAATCTAGTTTGTTTCAGTCGAAAAGACTTCGGTC 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1295 AGTCAGAAAGTAGCTATGAGTTATATAATCTAGTTTGTTTCAGTCGAAAAGACTTTGGTC 1354
Query 1307 TGATTGTGGGCGTGGATGACAAAGGTGACGGTTACAAGGTTCTGAAAGAAGGTTTAGATG 1366
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1355 TGATTGTGGGTGTGGATGACAAAGGTGACGGTTACAAGGTTCTGAAAGAAGGTATAGATG 1414
Query 1367 GACCTGTTGTAGTCACTGTTGGAAAAAAGGAAATGCATAATGGACCTTTTGATTCAAAAT 1426
|||| ||||||||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct 1415 GACCCGTTGTAGTCACTGTTGGAAAAAAAGAAATGCAGAATGGACCGTTTGATTCAAAAT 1474
Query 1427 TTACTGCCTTGGATCTG---AA-TAAC-AA-A-C---AAAT-A-----T-CA-A-TT--- 1464
||||||||||||||||| || ||| || | | |||| | | | | ||
Sbjct 1475 TTACTGCCTTGGATCTGAACAAGAAACAAATATCAGTAAATGATGTTGTGAAGATTTCCA 1534
Query 1465 AATG---AT--GTTGGTAAACAAGGAGTTGTAAGGCAAGTATACAGAGGGATCATATTTA 1519
|| | || | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1535 AAGGCCCATCCGAGGGTAAACAAGGAGTTGTAAGGCAAGTATACAGAGGGATCATATTCC 1594
Query 1520 TTTATGATGAGAGCGAGGAAGAAAATGGTGGATATTTCTGCTGCAAATCACACTCATGTG 1579
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1595 TTTATGATGAGAGCGAGGAAGAAAATGGTGGATATTTCTGCTGCAAATCACAATCATGTG 1654
Query 1580 AGAAAGTTAAACTCTTTACTGAAGACTCCAATGAGAAGACTGGTGGATTTGATGCTTCAG 1639
||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||
Sbjct 1655 AGAAAGTTAAACTCTTTACTGAAGAGTCCAATGAGAAGACTGGTGGATTTGATGGTACAG 1714
Query 1640 CTTTTGGAGATTCTGTATCCTCCCCAAAATCGCCGCTATCTCCTGAAAAAGAGTGGCAGC 1699
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1715 CTTTTGAAGATTTTGTATCCTCCCCAAAATCGCCGCTATCTCCTGAAAAAGAGTGGCAGC 1774
Query 1700 CCAGGGAAAGATACAATAATTCCAACCAAGGAGACAGAGGTAGCACGTATTCTATAGGCC 1759
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 1775 CCAGGGAAAGATACAATAGCTCCAACCAAGGAGACATAGGTAGCACGTATTCTATAGGCC 1834
Query 1760 AAAAGCTGAGGATACGGGTGGGTCCATTGAAGGGGTATCTCTGCCGTGTAATAGCTTTAC 1819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1835 AAAAGCTGAGGATACGGGTGGGTCCATTGAAGGGGTATCTCTGCCGTGTAATAGCTTTAC 1894
Query 1820 GCTATTCTGATGTTACAGTCAAGCTTGATTCCCAGCATAAAGTTTTCACAGTTAAAAGTG 1879
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1895 GTTATTCTGATGTTACAGTCAAGCTTGATTCCCAGCATAAAATTTTCACAGTTAAAAGTG 1954
Query 1880 AGCATCTAGTTGAGGTTCGCGACAGAAACACTGCGCTAAGTACAAGTGGGGATGCGGGCA 1939
||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 1955 AGCATCTTGCTGAGGTTCGCGACAGAAACACTGTGCTAAGTACAAGTGGGGATGCGGGTA 2014
Query 1940 -TGGGTTCCTTTCAACCTTTTGACATGCTTGGAACAGAAAGCAGCACTGGAGACTGGGCG 1998
||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2015 CTGG-TTCCTTTCAACCTTTTGGCATGCTTGGAACAGAAAGCAGCACTGGAGACTGGGCG 2073
Query 1999 AAAGGAGCAGGCACGTCAGGTGAGGGTGGTAACTGGAATATAGGAGGCCCTTCTACTGAT 2058
| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2074 ATAGGAGCAGGGACGTCAAGTGAGGGTGGTAACTGGAATATAGGAGGCCCTTCTACTGAC 2133
Query 2059 TCG 2061
|||
Sbjct 2134 TCG 2136
Score = 233 bits (126), Expect = 9e-60
Identities = 175/198 (88%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 2966 AAAAGGATGATGGAGGATCATCGTGGGGTAAGAAGGACGATGGAGGATCTTCTTGGGGCA 3025
||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2984 AAAAGTTTGATGGAGGATCATCATGGGGTAAGAAGGACGATGGAGGATCTTCTTGGGGCA 3043
Query 3026 AAAAGGACGATGGAGGATC-TTCTTGGGGCAAAAAGGACGATGGGGGATCGTTGT-GGGG 3083
||||||| ||||||||||| || | |||| |||||||| ||||| ||||| || | ||||
Sbjct 3044 AAAAGGATGATGGAGGATCGTTGT-GGGGAAAAAAGGATGATGGAGGATC-TTCTTGGGG 3101
Query 3084 TAAAAAGGATGATGGAGGATC-TTCTTGGGGCAAAAAGGATGATGGAGGATCATCGTGGG 3142
||| |||||||||||||||| || | |||| || ||||||||||||| ||| |||||||
Sbjct 3102 CAAAGAGGATGATGGAGGATCGTTGT-GGGGTAAGAAGGATGATGGAGAATCGTCGTGGG 3160
Query 3143 GTAAGAAGGATGAGGGAG 3160
||||||||||||| ||||
Sbjct 3161 GTAAGAAGGATGATGGAG 3178
Score = 228 bits (123), Expect = 4e-58
Identities = 233/281 (83%), Gaps = 27/281 (10%)
Strand=Plus/Plus
Query 2887 TGGGGTAAAAAGGATGACGGA--GGC-TCGTGGGGTAATAAGGATGACGGAGTATCATCG 2943
||||||||||||| ||||||| ||| ||||||||||| ||||||||||||| | |||
Sbjct 2830 TGGGGTAAAAAGGGTGACGGAGCGGCATCGTGGGGTAAAAAGGATGACGGAG--GC-TCG 2886
Query 2944 TGGGGTAAGAAA-GATGACGGTCAA-AAGGATGATGGAGGATCATCGTGGGGTAAGAAGG 3001
|||||||| ||| ||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 2887 TGGGGTAA-AAAGGATGACGGT-AATAAGGATGATGGAGGATCATCGTGGGGTAAGAA-- 2942
Query 3002 ACGATGGAGGATCTTCTTGGGGCAAAAAGGACGATGGAGGATCTTCTTGGG-GCAAAAAG 3060
| ||| || | || | ||||||| || |||||||| ||||||| | ||||||
Sbjct 2943 A-GAT----GA----C---GGTC-AAAAGGATGACGGAGGATCGTCTTGGGAG-AAAAAG 2988
Query 3061 GACGATGGGGGATCGTTGTGGGGTAAAAAGGATGATGGAGGATCTTCTTGGGGCAAAAAG 3120
||||| ||||| | |||||||| ||||| |||||||||||||||||||||||||||
Sbjct 2989 TTTGATGGAGGATCATCATGGGGTAAGAAGGACGATGGAGGATCTTCTTGGGGCAAAAAG 3048
Query 3121 GATGATGGAGGATCATCGTGGGGTAAGAAGGATGAGGGAGG 3161
|||||||||||||| | |||||| || |||||||| |||||
Sbjct 3049 GATGATGGAGGATCGTTGTGGGGAAAAAAGGATGATGGAGG 3089
Score = 174 bits (94), Expect = 6e-42
Identities = 324/428 (76%), Gaps = 44/428 (10%)
Strand=Plus/Plus
Query 3485 GTGGCGGATCTAGCTGGGGCAAGCAAGACA-CTGGTGGGGATGGTTCGAGCTGGGGTAAA 3543
|||||||||||||||||||||||||||| | | ||||| ||||| ||||||||||||
Sbjct 3380 GTGGCGGATCTAGCTGGGGCAAGCAAGATGGC-GATGGGGGCGGTTCAAGCTGGGGTAAA 3438
Query 3544 CAGGATGGTGGTGGTAGTAGTGGTTCTGGTTGGGGTAAGCA-GAACAATGCTAGTGGTGG 3602
|| ||| || |||| | |||| ||| | ||||| ||||| || ||||| | || |||
Sbjct 3439 GAGAATGATGCTGGT-G--GTGGATCTAGCTGGGGAAAGCAAGA-CAATGGT-GT--TGG 3491
Query 3603 ATCAAGCTGGGGCAAGCAGAGTGATGCTGGTGG-GG-G-ATCTAGCTGGGACAAGCAAGA 3659
||||||||||| || |||| |||| | |||| || | ||||||||||| |||||| ||
Sbjct 3492 TTCAAGCTGGGGTAAACAGAACGATGGTAGTGGTGGTGGATCTAGCTGGGGCAAGCA-GA 3550
Query 3660 CGG-TGGTGG-GGGTGGTTCAAGCTGGGGCAAACAAGATGGTGGTGGTGGCAGTGGTTCT 3717
| || ||| ||| || || ||||||||||| ||||| ||||||| || | ||||||
Sbjct 3551 ATGATGCTGGTGGG-GGATCTAGCTGGGGCAAGCAAGACAGTGGTGG-GG-A-TGGTTCG 3606
Query 3718 -GCCTGGGGTAAGCAGAACGATACTAGTGGTGGATCA-TCGAGCTG---GGGG-AAGCAG 3771
|| |||||||||||| ||| | |||||| || | | | ||| |||| ||||||
Sbjct 3607 AGC-TGGGGTAAGCAG---GATGGTGGTGGTG-AT-AGTGGTTCTGCTTGGGGTAAGCAG 3660
Query 3772 AATGACT-CTGGTGGAGGATCTAGTTGGGGAAAGCA-AGAtggtggtgg-gggtggttca 3828
|| | | || |||| ||||| || ||||||||||| || || || ||| ||| || ||
Sbjct 3661 AACAA-TACTAGTGGTGGATCGAGCTGGGGAAAGCAGAG-TGATGCTGGTGGG-GGATCT 3717
Query 3829 agctggggtaaaccggataacgatggtggtggtggtggATCGAGTTGGGGCAAGCAGGGT 3888
|||||||| || | | | || |||||||| ||||| || || ||||| || || | |
Sbjct 3718 AGCTGGGGCAAGC---A-A--GACGGTGGTGGGGGTGGTTCAAGCTGGGGTAAACAAGAT 3771
Query 3889 GATGGTGG 3896
| ||||||
Sbjct 3772 GGTGGTGG 3779
Score = 152 bits (82), Expect = 3e-35
Identities = 113/127 (89%), Gaps = 5/127 (4%)
Strand=Plus/Plus
Query 3349 AGCTGGGGTAAAG-AGAATGATACTGGTGGTGGATCTGGCTGGGGAAAGCAAGACAGTGG 3407
|||||||| ||| |||||||| ||||||| ||||| |||||||||||||||| ||||
Sbjct 3829 AGCTGGGG-GAAGCAGAATGATTCTGGTGGAGGATCAAGCTGGGGAAAGCAAGATGGTGG 3887
Query 3408 TGGTGGTGGTTCAAGCTGGGGTAAACAGAACGATGCTAGTGGTGGTGGATCGAGCTGGGG 3467
||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 3888 TGGGGGTGGTTCAAGCTGGGGTAAACAGAACGATG---GTGGTGGTGGGTCGAGCTGGGG 3944
Query 3468 CAAGCAG 3474
|||||||
Sbjct 3945 CAAGCAG 3951
Score = 65.8 bits (35), Expect = 4e-09
Identities = 37/38 (97%), Gaps = 0/38 (0%)
Strand=Plus/Plus
Query 3118 AAGGATGATGGAGGATCATCGTGGGGTAAGAAGGATGA 3155
|||||||||||||||||||||||||||||||| |||||
Sbjct 2911 AAGGATGATGGAGGATCATCGTGGGGTAAGAAAGATGA 2948
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 220935216972
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5