BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487236
Length=3014
Score E
Sequences producing significant alignments: (Bits) Value
AT5G04540.1 | Symbols: | Myotubularin-like phosphatases II sup... 4715 0.0
AT3G10550.1 | Symbols: MTM1, AtMTM1 | Myotubularin-like phospha... 2250 0.0
> AT5G04540.1 | Symbols: | Myotubularin-like phosphatases II superfamily
| chr5:1296442-1302444 REVERSE LENGTH=3031
Length=3031
Score = 4715 bits (2553), Expect = 0.0
Identities = 2884/3040 (95%), Gaps = 38/3040 (1%)
Strand=Plus/Plus
Query 1 CGTATTTAGATGTCTCATTGTCTTTGTGGCGAAAAGGCAGCGTGCTAAATCCGTCCTTTG 60
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1 CGTATTTGGATGTCTCATTGTCTTTGTGGCAAAAAGGCAGCGTGCTAAATCCGTCCTTTG 60
Query 61 CCACCGTTGAGCGGCAGGTGAAGCCGAACCCGAATCACCGtctctctca----tctctct 116
||||||||||||||| |||||| || || ||||||||||||||||| || |||||||
Sbjct 61 CCACCGTTGAGCGGCCGGTGAACCCCAAGCCGAATCACCGTCTCTCCCACCTCTCTCTCT 120
Query 117 ---ctc-CT-T-T-T-C------A-ATGACGGCGCTGAGACCTCTCTCCGGGAGATCACG 161
||| || | | | | | ||||||||||||||||||||||||||| |||||||
Sbjct 121 CCCCTCTCTCTCTCTCCTTTTTTACATGACGGCGCTGAGACCTCTCTCCGGGCGATCACG 180
Query 162 ATCGCTGCGATGTTCGTCGGAGAAGATGGAAGGTACCGGAAGCTGGGACGTACTTGAATG 221
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 181 ATCGCTGCGATGTTCGTCGGAGAAGATGGAAGGTACCGGAAGCTGGGACGTGCTTGAATG 240
Query 222 GACTAAACTCGATTCAGCTTCTTGGTCAGGCTCGTATTCGAATTTGGATTGCTTGCTGGA 281
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 241 GACTAAACTCGATTCAGCTTCATGGTCAGGCTCGTATTCGAATTTGGATTGCTTGCTGGA 300
Query 282 ATCTGAGAGGATCATCTTCGAGGCTTGTGGAGTTATTCTCATTAACACCGATGAGGCAGG 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 ATCTGAGAGGATCATCTTCGAGGCTTGTGGAGTTATTCTCATTAACACCGATGAGGCAGG 360
Query 342 GACCCTCTTATTGTCAAATTTCCGTATTCTGTTTTTGAGTGAAGGAACCAGAAAGCTTAT 401
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 361 GACCCTCTTGTTATCAAATTTCCGTATTCTGTTTTTGAGTGAAGGAACCAGAAAGCTTGT 420
Query 402 TCCACTTGGTACAATTCCATTTGTAGCTATCGAGAAGTTTAACAAACTGGCGCTGAAAGT 461
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 421 TCCACTTGGTACAATTCCATTTGTAGCTATCGAGAAGTTTAACAAACTGGCGCCGAAAGT 480
Query 462 TCAAGCAAACAAATATCACAACAACGAGAATGCACCGACACGACTTTTACAGGTCACTGG 521
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 481 TCAATCAAACAAATATCACAACAATGAGAATGCACCGACACGACTTTTACAGGTCACTGG 540
Query 522 AAAAGACATGAGGATAGTTGTCTACGGTTTTCGACCTGGTACCAAGCAGAGACGTTCTGT 581
|||||| ||||| ||||||||||| |||||||||||||||||||||||||||| | ||||
Sbjct 541 AAAAGATATGAGAATAGTTGTCTATGGTTTTCGACCTGGTACCAAGCAGAGACATACTGT 600
Query 582 AGTTGATGCGCTATTGAGGTGTAACAAACCAGAGAGAGTATGGGATCTGTATGCTTTCAC 641
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 601 AGTTGATACGCTATTGAGGTGTAACAAACCAGAGAGAGTATGGGATCTTTATGCTTTTAC 660
Query 642 ATGTGGGCCTTCCAAATTCGGTAACACAAACCCAAAGGAAAGATTGCTTAATGAATATTT 701
||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 ATGCGGACCTTCCCAATTCGGTAACACAAACCCAAAGGAAAGATTGCTTAATGAATATTT 720
Query 702 TCGGCTTCTTGGAAAAAGTTCACAACGAGCGTCAATGAATATGATTGAAGACGGAACATT 761
||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 721 TCGCCTTCTCGGAAAAAGTTCACAACGAGCGTCAATGAATATGATTGAAGACGGTTCATT 780
Query 762 CACTCTGTCCAATGACCTTTGGCGTATTACTAACTTGAACTCAAATTATGACTTGTGTCA 821
|||||| |||||||| ||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct 781 CACTCTATCCAATGATCTTTGGCGTATAACTAACTTAAACTCAAATTATGACTTGTGCCA 840
Query 822 GAGTTATCCGTTTGCTTTGATGGTTCCAAAATCCATTAGTGATGAAGAGCTGATCCAGAC 881
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 841 GAGTTATCCGTTTGCTTTGATGGTTCCAAAATCCATTAGTGATGAAGAGCTGCTCCAGAC 900
Query 882 GTCTACTTTCCGGGCAAGATGTCGCTTACCTGTGATCTCGTGGTGTCATCCAGGAAGTGG 941
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 TTCTACTTTCCGGGCAAGATGTCGCTTACCTGTGATCTCGTGGTGTCATCCAGGAAGTGG 960
Query 942 AGCTGTGATTGCTCGCTCATCACAACCTTTAGTTGGTCTGATGATGAACATGAGGAGTAC 1001
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 AGCTGTGATTGCTCGCTCATCACAACCTTTAGTTGGTCTGATGATGAACATGAGGAGTAA 1020
Query 1002 CTCTGATGAGAAACTTGTCACTTCATTCTGCACTCAATTAGCTGGTCATAAGGGATCACG 1061
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1021 CTCTGATGAGAAACTTGTTGCTTCATTCTGCACTCAATTAGCTGGTCATAAGGGAGCACG 1080
Query 1062 AAGGAAGCTTTATATCGTAGATGCAAGACCTAGGAAAAATGCATTAGCAAATGGAGCAAA 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 AAGGAAGCTTTATATCGTAGATGCAAGACCTAGGAAAAATGCATTAGCAAATGGAGCAAA 1140
Query 1122 GGGAGGAGGCTCAGAATCATCTTCAAATTATTTGCAATCTGAAATTGtttttttGGGGAT 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 GGGAGGAGGCTCAGAATCATCTTCAAATTATTTGCAATCTGAAATTGTTTTTTTGGGGAT 1200
Query 1182 AGACAACATACATGCAATGAGAGAGAGTTTTTCCCGCCTTAGGGATTATTTAGATATGCA 1241
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1201 AGACAACATACATGCAATGAGAGAGAGCTTTTCCCGCCTTAGGGATTATTTAGATATGCA 1260
Query 1242 TGGTACAACATCATCCGATGGGACGTCATCATTCTTGAGGCATGGTGGCTGGACGTGGGG 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 TGGTACAACATCATCCGATGGGACGTCATCATTCTTGAGGCATGGTGGCTGGACGTGGGG 1320
Query 1302 TGGAGGTAATCTCAGTAGTATGTCGGCTTCAGTATCCTTGCTTGGAGATAGTGGGTGGTT 1361
|||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||
Sbjct 1321 TGGAGGTAATCTCAGTAGTATGTCTGCTTCAGTATCCGTGCTTGGAGATAGTGGTTGGTT 1380
Query 1362 GAGTCACATCCAGAGCATCTTAGCTGGTGTAGCATGGATTGCTGCACGTGTTGCTATGGA 1421
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 GAGTCACATTCAGAGCATCTTAGCTGGTGTAGCATGGATTGCTGCACGTGTTGCTATGGA 1440
Query 1422 GTCGGCATCAGTTCTCGTGCACTGCAGTGATGGATGGGACAGAACAACTCAGCTGGTTTC 1481
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 GTCAGCATCAGTTCTTGTGCACTGCAGTGATGGATGGGACAGAACAACTCAGCTGGTTTC 1500
Query 1482 TCTTGCATGCTTATTGCTTGATCCATACTACAGAACATTTTCTGGGTTTCAGGCTCTTGT 1541
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1501 TCTTGCATGCTTATTGCTTGATCCTTACTACAGAACATTTTCTGGGTTTCAGGCTCTTGT 1560
Query 1542 CGAAAAGGATTGGTTAGCATTTGGTCACCCATTTTCGGATCGAGTGGGAATGCCTAACGT 1601
|||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1561 CGAAAAGGATTGGTTATCATTTGGTCACCCATTTTCGGATCGGGTGGGAATGCCAAACGT 1620
Query 1602 GTCTGAATCTGGTAATTTTGAATTACCAATTCAGTCTTCTTCTGCTCGAAGTTTCCCTTC 1661
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1621 GTCTGAATCTGGTAATTTTGAATTACCAATTCAGTCTTCTTCTGCTCGAAGTTTTCCTTC 1680
Query 1662 ATCTCCAGTGCGGCAATCTCCAGGATCAGCAGCTGCTCAATCTTCTAGCTCTTCATATGG 1721
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1681 ATCTCCAGTGCGGCAATCTCCAGGATCAGCAGCTGCTCAATCCTCTAGCTCTTCATATGG 1740
Query 1722 GCTGAACAACTATTCTCCTATATTTTTGCAGTGGCTTTATTGCGTTTCACAGCTAATGCG 1781
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1741 GCTGAACAACTATTCTCCTATATTTTTGCAGTGGCTTGATTGCATTTCACAGCTAATGCG 1800
Query 1782 GATGTATCCTTCTGCTTTCGAGTTTTCTCCGACTTTCCTGGTAGATTTCACGGACTGCTT 1841
|||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 1801 GATGTATCCTTCTGCTTTCGAGTTTTCTCCGACTTTTCTGGTAGATTTCATAGACTGCTT 1860
Query 1842 GCTTTCAG-GTCGTTTTGGGAACTTTTTGTGTAATAGTGAAAAAGAGAGGCAGCAATGTG 1900
|||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1861 GCTTTC-GTGTCGTTTTGGGAACTTTTTGTGCAATAGTGAAAAAGAGAGGCAGCAATGTG 1919
Query 1901 GGATTTCTGAAACCTGTGGATGCCTTTGGGCCTACTTGGCCGATTTGCGTTCTTCCGGTG 1960
||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| |||
Sbjct 1920 GGATTTCTGAAACCTGTGGATGCATTTGGGCCTACTTGGCTGATTTGCGTTCCTCCAGTG 1979
Query 1961 GAACTTCTCATGTCCATTGTAATCCATTTTATGATCCTTCAAGATATGATGGCCCATTAT 2020
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1980 GAACTTCTCATGTCCACTGTAACCCATTTTATGATCCTTCAAGATATGATGGCCCATTAT 2039
Query 2021 TACCTCCTGCAGCAGCTCTAGCCCCGACTCTCTGGCCCCAGTTCCATCTCCGGTGGGCCT 2080
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2040 TACCTCCTGCAGCAGCTCTAGCCCCAACTCTCTGGCCCCAGTTCCATCTCCGGTGGGCCT 2099
Query 2081 GCCCTGTGGAGCCGAACGCCACAGAAACCGAGGACCAATGTAGAGCCATGACTGCTAAGT 2140
|||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||
Sbjct 2100 GCCCTGTGGAGCCGAACGTCACAGAAACCGAAGACCAATGTAGAGCCATGACTGTTAAGT 2159
Query 2141 ATTCagaaatgaagaaggagaaagaagaagcagaaaggaagGTAGACGAGTTATCTTCTG 2200
||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||
Sbjct 2160 ATTCAGAAATGAAGAAGGAAAAAGAAGAAGCAGAGAGAAAGGTAGATGAGTTATCTTCTG 2219
Query 2201 CAGTGGAATCATTGAGCGAAGAGTTACTGAACGAGAGAGATATAAGCCATGCAGCTAGAG 2260
|| |||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2220 CAATGGAGTCATTGAACGAAGAGTTACTGAACGAGAGAGATATAAGCCGTGCAGCTAGAG 2279
Query 2261 AATCAGCAAAGAGAGCTACAAAAGAGCGTGCAGTCATATCACGAGCTGTGCAGTCACTCG 2320
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2280 AATCAGCAAAGAGGGCTACAAAAGAGCGTGCAGTCATATCACGAGCTGTGCAGTCACTCG 2339
Query 2321 GCTGCAAAGTTAAATTCACAAAAAACGGAGATTGCACAGTCGAAGTAGAAGATGGTCCAC 2380
||||||||||||||||||||| |||||||||||||||||| ||||||||||| || || |
Sbjct 2340 GCTGCAAAGTTAAATTCACAAGAAACGGAGATTGCACAGTTGAAGTAGAAGACGGGCCTC 2399
Query 2381 GGAAATGTTCTCACTCAATTCCCCAAAAACCATCTGAGGATAACACAACAGATGTCTCAG 2440
||||||||| ||||||||||||||||||| ||||||||| ||||| |||||||||||||
Sbjct 2400 AGAAATGTTCACACTCAATTCCCCAAAAACAATCTGAGGACAACACCACAGATGTCTCAG 2459
Query 2441 AATCTATCTCATCGGTGACTGAACAAAATGTTTGTGAAGCATTGTGTCCGTTGCGTACAA 2500
|||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 2460 AATCTATCTCATCGGTTACTGAACAAAATGTGTGTGAAGCAGTGTGTCCGTTGCGTACAA 2519
Query 2501 GAGAAGGAATGTGTCGACGGCCTGATGCGGGTTGTGCTCAGA-TCGGGAGCCAATTTCTT 2559
||||||||| |||| || ||||||||||||||||||||| || |||||| |||||||||
Sbjct 2520 GAGAAGGAACGTGTAGATGGCCTGATGCGGGTTGTGCTC-GAATCGGGAACCAATTTCTC 2578
Query 2560 GGGTTAAAAACAAACTTTGAGGCGTTTGATAATCTCTGCGTCTACGACAGCTATTTCACA 2619
||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 2579 GGGTTGAAAACAAACTTTGAAGCGTTTGATAATCTATGCGTCTACGACAGCTATTTCACA 2638
Query 2620 GCTGAATGAGAGTCCAAGTTT-CACCAGATCGACCCGAAATCATGAACCTGTGTGTAttt 2678
|||||||||||| |||||||| |||||||| |||| |||| | ||||||||||||||||
Sbjct 2639 GCTGAATGAGAGACCAAGTTTTCACCAGATTGACCAAAAATGAAGAACCTGTGTGTATTT 2698
Query 2679 tttttGACAGAGTAAGGCATAGCAAACAGCAACAGAGGAACAGAATCATCAATAAAACCC 2738
|||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 2699 TTTTTGACAGAGTAAGGCATAGCAAACACCAAT-GAGGAACAGAATCATCAATAAAACCC 2757
Query 2739 CATTAAAAAGGCGGTACAAAACCGCCAAACCAAGAGCGTTTTGGAAAGTGGGTGCGCATC 2798
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2758 CAT-AAAAAGGCGGTACAAAACCGCCAAACCAAGAGCGTTTTGGAAAGTGGGTGCGCTTC 2816
Query 2799 GGGAACTAACTTCTTGTATAG-CAATGCGATCATGTATAGACTAGA-TAGGGTCTGCAGG 2856
||||||||||||||||||||| |||||||||||||||||||||||| | | |||||||
Sbjct 2817 GGGAACTAACTTCTTGTATAGGCAATGCGATCATGTATAGACTAGAGTCTG--CTGCAGG 2874
Query 2857 TTGCTGGCTTCATTGAGAACGTTAGATTTGTGATTTATTTTATTTTTGTTGGTTGAT-AA 2915
||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||
Sbjct 2875 TTGCTGGCTTCATTGAGAACGTTAGATTTGT--T--ATTTTATTTTTGTTGGTTGATGAA 2930
Query 2916 ATGATTTAAAAGATTGAAAGTTATGTACAA-TTTCTTAACGAATTTGTTGTAACTAAAAC 2974
|||| | ||| ||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 2931 ATGACT-AAA-GATTGAAAGTTATGTACAAATTTCTTAACGAATTTGTTGTAACGAAAAC 2988
Query 2975 TGATTATAGGATTATTGAGACAACAACAGTTATTATAATC 3014
|||| |||||||||||||||| ||||||| |||||| |||
Sbjct 2989 TGATAATAGGATTATTGAGACGACAACAGCTATTATTATC 3028
> AT3G10550.1 | Symbols: MTM1, AtMTM1 | Myotubularin-like phosphatases
II superfamily | chr3:3292899-3298522 REVERSE LENGTH=2904
Length=2904
Score = 2250 bits (1218), Expect = 0.0
Identities = 1975/2331 (85%), Gaps = 89/2331 (4%)
Strand=Plus/Plus
Query 57 TTTGCCACCGTTGAGCGGCAGGTGA--AGCC-GAA-CC-CGAATCACCGtctctctcatc 111
|||| | ||||||| |||||||||| | || ||| || || ||||||||||| | ||
Sbjct 3 TTTG-CTCCGTTGATCGGCAGGTGATCA-CCAGAAGCCTCG--TCACCGTCTCT-T--TC 55
Query 112 tctctctcC-TTTTCAATGACGGCGCTGAGACCTCTC-TCCGGGAGA-TCACGATCGCTG 168
|||| | || ||||| |||||| ||| |||||| | | || ||| || | | | ||||||
Sbjct 56 TCTCCCCCCTTTTTC-ATGACGCCGCCGAGACCAC-CGTCTGGGCGAGT-AAGGTCGCTG 112
Query 169 C--GA-TGTTCGTCGG----AG--AAGATGGAAGGTACCGGAAGCTGGGACGTACTTGAA 219
| || | ||| |||| || |||||||| |||||||| || |||||| ||||||
Sbjct 113 CGTGATTATTCTTCGGAATCAGAAAAGATGGATGGTACCGGTAGTTGGGACACGCTTGAA 172
Query 220 TGGACTAAACTCGATTCAGCTTCTTGGTCAGGCTCGTAT-TCGAATTTGGA-TTGCTTGC 277
||||| |||||||||||| |||| ||||||| || | | |||||||| || ||||||||
Sbjct 173 TGGACCAAACTCGATTCAACTTCAGGGTCAGGTTC-TTTCTCGAATTT-GAGTTGCTTGC 230
Query 278 TGGAATCTGAGAGGATCATCTTCGAGGCTTGTGGAGTTATTCTCATTAACACCGATGAGG 337
||||||| |||||| ||||| |||||| || ||||||| | || ||||||||||||||||
Sbjct 231 TGGAATCGGAGAGGGTCATCGTCGAGGGTTATGGAGTTGTGCTTATTAACACCGATGAGG 290
Query 338 CAGGGACCCTCTTATTGTCAAATTTCCGTATTCTGTTTTTGAGTGAAGGAACCAG-AAAG 396
|||| ||||| || || | |||||||||||||| |||||||||||||||||||| ||||
Sbjct 291 CAGGAACCCTTTTGGTGACTAATTTCCGTATTCTTTTTTTGAGTGAAGGAACCAGAAAAG 350
Query 397 CTTATTCCACTTGGTACAATTCCATTTGTAGCTATCGAGAAGTTTAACAAACTGGCGCTG 456
| ||||||||||||||||||||||| | | |||| ||||||||||||||| ||| |||
Sbjct 351 -TCATTCCACTTGGTACAATTCCATTGGCAACTATTGAGAAGTTTAACAAAATGGTTCTG 409
Query 457 AAAGTTCAAGCAA-ACAAATATCACAAC-AACGAGAATGCACCGACACGACTTTTACAGG 514
||||||||| ||| | ||| | || ||| | |||| | ||| ||||||||||
Sbjct 410 AAAGTTCAATCAAGTC-CCCGTCA-GTCTGACAAGATTCCACCAAGACGTCTTTTACAGG 467
Query 515 TCACTGGAAAAGACATGAGGATAGTTGTCTACGGTTTTCGACCTGGTACCAAGCAGAGAC 574
||||||| ||||||||||||||| |||| || || ||||| ||| | |||||||||||||
Sbjct 468 TCACTGGCAAAGACATGAGGATAATTGTTTATGGCTTTCGTCCTCGCACCAAGCAGAGAC 527
Query 575 GTTCTGTAG-TTGATGCGCTATTGAGGTGTAACAAACCAGAGAGAGTATGGGATCTGTAT 633
|| ||| | ||||||| || ||| ||||| ||| ||||||||||| |||||||| |||
Sbjct 528 GTAATGT-GTTTGATGCATTACTGAAGTGTACCAAGCCAGAGAGAGTTTGGGATCTATAT 586
Query 634 GCTTTCACATGTGGGCCTTCCAAATTCGGTAACACAAACCCAAAGGAAAGATTGCTTAAT 693
|||| |||| |||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 587 ACTTTTGCATGCGGGCCTTCCAAATTTGGTAACGCAAACCCAAAGGAAAGATTGCTTAAT 646
Query 694 GAATATTTTCGGCTTCTTGGAAAAAGTTCACA-ACGAGCGTCAATGAATATGATTGAAGA 752
|||||||| || ||||| |||||||||||| | |||||| |||||| |||||||||||||
Sbjct 647 GAATATTTCCGTCTTCTCGGAAAAAGTTCA-ATACGAGCATCAATGGATATGATTGAAGA 705
Query 753 CGGAACATTCAC-TCTGTCCAATGACCTTTGGCGTATTA-CTAACTTGAACTCAAATTAT 810
|| | ||||| | |||||||||| || ||||| || | | |||||||||| |||||
Sbjct 706 TGGTGCGTTCACAT-TGTCCAATGAGCTGTGGCGAATAAGC-GACTTGAACTCCAATTAC 763
Query 811 GACTTGTGTCAGAGTTATCCGTTTGCTTTGATGGTTCCAAAATCCATTAGTGATGAAGAG 870
|||||||||||| |||||| |||||||| ||| ||||||||||||| ||||||| ||||
Sbjct 764 AACTTGTGTCAGACTTATCCATTTGCTTTTATGATTCCAAAATCCATAAGTGATGCAGAG 823
Query 871 CTGATCCAGACGTCTACTTTCCGGGCAAGATGTCGCTTACCTGTGATCTCGTGGTGTCAT 930
||| ||||| ||| | |||||||||||||||||||||||||||||||| | ||||||||
Sbjct 824 CTGCTCCAGGCGTGTTCTTTCCGGGCAAGATGTCGCTTACCTGTGATCACATGGTGTCAG 883
Query 931 CCAGGAAGTGGAGCTGTGATTGCTCGCTCATCACAACCTTTAGTTGGTCTGATGATGAAC 990
||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||
Sbjct 884 CCAGGAAGTGGAGCTGTGATTGCACGCTCATCACAACCTTTAGTGGGTCTTATGATGAAT 943
Query 991 ATGAGGAGT-ACCTCTGATGAGAAACTTGTCACTTCATTCTGCACTCAATTAGCTGGT-C 1048
||||||||| | || |||||| ||||| || || |||||||| |||| ||| ||||| |
Sbjct 944 ATGAGGAGTAATCT-TGATGAAAAACTAGTTGCTGCATTCTGCTCTCAGTTACCTGGTGC 1002
Query 1049 ATAAGGGATCACGAAGGAAGCTTTATATCG-TAGATGCAAGACCTAGGAAAAATGCATTA 1107
||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||
Sbjct 1003 -TAAGGGAGAACGAAGGAAGCTTTATATTGCT-GATGCAAGACCTAGGAAAAATGCATTA 1060
Query 1108 GCAAATGGAGCAAAGGGAGGAGGCTCAGAATCATCTTCAAATTATTTGCAATCTGAAATT 1167
|| |||||||||| |||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct 1061 GCCAATGGAGCAATGGGAGGTGGCTCAGAATCATCTTCCAATTATTTTCAATCTGAAATT 1120
Query 1168 Gtttt-tttGGGGATAGACAACATACATGCAATGAGAGAGAGTTTTTCCCGCCTTAGGGA 1226
||||| ||| || ||||||||||||||||||||||| ||||| ||||||||| |||| ||
Sbjct 1121 GTTTTCTTT-GGCATAGACAACATACATGCAATGAGGGAGAGCTTTTCCCGCGTTAGAGA 1179
Query 1227 TTATTTAGATATGCATGGTACAACATCATCCGATGGGACG-TCATCATTCTTGAGGCATG 1285
||||||||||||||| |||||||||||||||||||||| | ||||| |||||||| || |
Sbjct 1180 TTATTTAGATATGCACGGTACAACATCATCCGATGGGA-GATCATCGTTCTTGAGACACG 1238
Query 1286 GTGGCTGGACGTGGGGTGGAGGTAATCTCAGTAGTATGTCGGCTTCAGTATCCTTGCTTG 1345
|||| ||||| ||||| ||||||||||| ||||||||||| ||||||||||| || ||||
Sbjct 1239 GTGGTTGGACCTGGGGAGGAGGTAATCTTAGTAGTATGTCTGCTTCAGTATCTTTACTTG 1298
Query 1346 GAGATAGTGGGTGGTTGAGT-CACATCCAGAGCATCTTAGCTGGTGTAGCATGGATTGCT 1404
|||||||||| ||||||| | |||||||||||| |||||||||||| |||||||||||||
Sbjct 1299 GAGATAGTGGCTGGTTGA-TACACATCCAGAGCGTCTTAGCTGGTGCAGCATGGATTGCT 1357
Query 1405 GCACGTGTTGCTATGGAGTCGGCATCAGTTCTCGTGCACTGCAGTGATGGATGGGACAGA 1464
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1358 GCACGTGTTGCTATGGAGTCGGCATCAGTTCTTGTGCACTGCAGTGATGGATGGGACAGA 1417
Query 1465 ACAACTCAGCTGGTTTCTCTTGCATGCTTATTGCTTGATCCATACTACAGAACATTTT-C 1523
||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 1418 ACAACTCAGCTTGTTTCTCTTGCGTGCTTATTGCTTGATCCATACTACAGAAC-TTTTGC 1476
Query 1524 TGGGTTTCAGGCTCTTGTCGAAAAGGATTGG-TTAGCATTTGGTCACCCATTTTCGGATC 1582
||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct 1477 TGGGTTTCAGGCTCTTGTCGAAAAGGATTGGCTT-GCTTTTGGTCACCCATTTTCGGATC 1535
Query 1583 GAGTGGGAATGCCTAACGTGTCTGAATCTGGTAATTTTGAATTACCAATTCAGTCTTCTT 1642
| || |||||||||||| | || | ||||||||||||||| || || | |||||||| |
Sbjct 1536 GTGTAGGAATGCCTAACATATCAGGATCTGGTAATTTTGACTTTCCTAGGCAGTCTTCGT 1595
Query 1643 CTGCTCGAAGTTTCCCTTCATCTCCAGTGCGGCAATCTCCAGGATCAGCAGC-TGCTCAA 1701
||||| ||||||||||||||||||| ||||| || ||| ||||||||||||| | | |||
Sbjct 1596 CTGCTGGAAGTTTCCCTTCATCTCCTGTGCGTCAGTCTTCAGGATCAGCAGCCT-CACAA 1654
Query 1702 TCTTCTAGCTCTTCATATGGGC-TGAACAACTATTCTCCTATATTTTTGCAGTGGCTTTA 1760
||||| |||||||| |||||| | ||||| ||||| ||||||||| |||||||| || |
Sbjct 1655 TCTTCAAGCTCTTCCCATGGGCAT-AACAATTATTCACCTATATTTATGCAGTGGATTGA 1713
Query 1761 TTGCGTTTCACAGCTAATGCGGATGTATCCTTCTGCTTTCGAGTTTTCTCCGACTTTCCT 1820
| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 1714 TAGCGTTTCACAGCTAATGCGGATGTATCCTTGTGCTTTTGAGTTTTCTCCGACTTTCCT 1773
Query 1821 GGTAGATTTCACGGACTGCTTGCTTTCAGGTCGTTTTGGGAACTTTTTGTGTAATAGTGA 1880
||||||||| | ||| |||||||||||| |||||||||||||||| || || || |||||
Sbjct 1774 GGTAGATTTTATGGATTGCTTGCTTTCATGTCGTTTTGGGAACTTCTTATGCAACAGTGA 1833
Query 1881 AAAAGAGAGGCAGCAATGTGGGATTTCTGAAACCTGTGGATGCCTTTGGGCCTACTTGGC 1940
|||||||||| | |||||||||||| |||| ||||||||||||| ||||| |||||| |
Sbjct 1834 AAAAGAGAGGGAACAATGTGGGATTGCTGATGCCTGTGGATGCCTATGGGCGTACTTGAC 1893
Query 1941 CGATTTGCGTTC-TTCCGGTGGAACTTCTCATGTCCATTGTAATCCATTTTATGATCCTT 1999
||| ||||||| || | || ||||||||||||||||||||| ||||| ||||||||||
Sbjct 1894 TGATCTGCGTTCATTTAG-TGCAACTTCTCATGTCCATTGTAACCCATTCTATGATCCTT 1952
Query 2000 C-AAGATATGATGGCCCATTATTACCTCCTGCAGCAGCTCTAGCCCCGACTCTCTGGCCC 2058
||| ||||| ||||||||| |||||||||||||| ||||||| || || || ||||||
Sbjct 1953 TGAAG-TATGACGGCCCATTACTACCTCCTGCAGCATCTCTAGCTCCTACCCTTTGGCCC 2011
Query 2059 CAGTTCCATCTCCGGTGGGCCTGCCCTGTGGA-GCCGAACGCCACAGAAACCG-AGGACC 2116
|||||||||||||||||||| || |||| ||| || || || |||| | | || ||
Sbjct 2012 CAGTTCCATCTCCGGTGGGCTTGTCCTGAGGAAGCTAAA-GCTGCAGATATTGGAGT-CC 2069
Query 2117 AATGTAGAGCCATGACTGCT-AAGTATTCagaaatg-aagaaggagaaagaagaagcaga 2174
|||||||||||||||| | | || ||||| |||||| || ||||||||||||| ||||||
Sbjct 2070 AATGTAGAGCCATGACAG-TGAAATATTCCGAAATGCAA-AAGGAGAAAGAAGCAGCAGA 2127
Query 2175 aaggaag-GTAGACGAGTTATCTT-CTGCAGTGGAATCATTGAGCGAAGAGTTACTGAAC 2232
||| ||| || |||||| |||||| | ||| |||| ||||| || | |||||| || ||
Sbjct 2128 AAG-AAGAGTGGACGAGATATCTTTC-GCAATGGAGTCATTAAGTGCAGAGTTGCT-AA- 2183
Query 2233 GAGAGAG--ATATAAGCCATGCAGCTAGAGAATCAGCAAAGAGAGCTACAAAAGAGCGTG 2290
|||| || || | || | |||||||||||||||||| ||||||| || || ||
Sbjct 2184 GAGAAAGGCATTTGAGTTGGGTAGCTAGAGAATCAGCAAATCGAGCTACCAAGGAATATG 2243
Query 2291 CAGTCAT-ATCACGAGCTGTGCAGTCACTCGGCTGCAA-AGTTAAATTCAC 2339
||| | | | | ||||| || || |||||||| ||||| | |||| |||||
Sbjct 2244 CAG-CTTTAACCCGAGCAGTACAATCACTCGGGTGCAAGA-TTAACTTCAC 2292
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 149848658741
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5