BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487239
Length=6512
Score E
Sequences producing significant alignments: (Bits) Value
AT5G04560.2 | Symbols: DME | HhH-GPD base excision DNA repair f... 6460 0.0
AT3G10010.1 | Symbols: DML2 | demeter-like 2 | chr3:3081814-308... 207 8e-52
> AT5G04560.2 | Symbols: DME | HhH-GPD base excision DNA repair
family protein | chr5:1309202-1318401 FORWARD LENGTH=6475
Length=6475
Score = 6460 bits (3498), Expect = 0.0
Identities = 4192/4518 (93%), Gaps = 84/4518 (2%)
Strand=Plus/Plus
Query 2024 AAACCAGCAGCCTGGATCATCT-ATGAGAGGCCAGCAGCCTTGCGTACGTTTGA-TGAAC 2081
||||||||| |||||||||| | || |||||||||||||||||||||| ||||| || ||
Sbjct 2013 AAACCAGCAACCTGGATCAT-TAATAAGAGGCCAGCAGCCTTGCGTACCTTTGATTG-AC 2070
Query 2082 CAGCAACCTGGAACTCCAAAAGGTTTTACTCACTTGAATCAGATGGTCGCTTCCTGCATG 2141
|||||||||| |||||||||||||||||||||||||||||||||||| ||| || |||||
Sbjct 2071 CAGCAACCTGCAACTCCAAAAGGTTTTACTCACTTGAATCAGATGGTAGCTACCAGCATG 2130
Query 2142 TCATCGCCTGGGCTTCAACCTCATTCTCAGTCACAAGTTCCTTCAACAAATTTATATGTG 2201
|||||||||||||||| ||||||||||||||||||||||||| ||||| || || |||||
Sbjct 2131 TCATCGCCTGGGCTTCGACCTCATTCTCAGTCACAAGTTCCTACAACATATCTACATGTG 2190
Query 2202 GAATCTGTTTCCAGGAGTTTGAATGGGACTACAGGTGCATGTCATAGAAGCAGCGCTCCT 2261
|||||||||||||||| ||||||||||||||||||| |||| || |||||||| ||||||
Sbjct 2191 GAATCTGTTTCCAGGATTTTGAATGGGACTACAGGTACATGCCAGAGAAGCAGGGCTCCT 2250
Query 2262 GAATACGGTTCTTTACAGCAAGATATCCATCAAGGAAATGAGTACATCCCTTCTCATGAG 2321
| ||||| ||||||||||||||||||||||||||||||| ||||||| | ||||||||||
Sbjct 2251 GCATACGATTCTTTACAGCAAGATATCCATCAAGGAAATAAGTACATACTTTCTCATGAG 2310
Query 2322 AGATCCAATGGTGAATTCTTTGACGTATGCAAAAAAGTAG-TATCTCAAAACTCTTCTTT 2380
| |||||||||| || || | ||||| |||| | || |||||||||||||| |
Sbjct 2311 ATATCCAATGGT-AA-----TG--G-GTGCAAGAAAG-CGTTACCTCAAAACTCTTCTCT 2360
Query 2381 GCCAACCCCAATTATGGCTAAACTTGAGGAAGCCAGGGGCTCGAAGAGACAGTATCATCC 2440
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2361 GCCAACTCCAATTATGGCTAAACTTGAGGAAGCCAGGGGCTCGAAGAGACAGTATCATCG 2420
Query 2441 TGCAATGGGACAGATGGAAAACCATGATCTAAACTTAGCAGATTTGGAGAGACACA-TGA 2499
|||||||||||||| |||||| ||||||||||||||||| | | ||| | ||
Sbjct 2421 TGCAATGGGACAGACGGAAAAGCATGATCTAAACTTAGC-----T---CA-ACAGATTG- 2470
Query 2500 CTCAATCACAAGATGTGGAGAGACATAACAGCAGACA-GTGTGCCAAATATTTAGGTGCT 2558
|||||||||||||||||||||||||||||||||| || ||||| ||||||||| ||||
Sbjct 2471 CTCAATCACAAGATGTGGAGAGACATAACAGCAG-CACGTGTGTGGAATATTTAGATGCT 2529
Query 2559 GCAAAGAAAATGAAAATCCAGAAAGTAGTCCAAGAAAATTTGCATGGCATGCCACCTGAG 2618
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2530 GCAAAGAAAACGAAAATCCAGAAAGTAGTCCAAGAAAATTTGCATGGCATGCCACCTGAG 2589
Query 2619 GTAATAGAAATCGAGGATGATCTAACTGATGGGGCAAG-AAAGG--ATAA-A-----AGC 2669
|| ||||||||||||||||||| ||||||||||||||| ||||| | || | |||
Sbjct 2590 GTTATAGAAATCGAGGATGATCCAACTGATGGGGCAAGAAAAGGTAAAAATACTGCCAGC 2649
Query 2670 ATCATTAAAACTGCATCTAAACGAATTTCGTGTTCAGTTCAAAAGTCAGCAGATAATGAG 2729
|||| |||| |||||||||| ||| |||| | ||||| ||||| ||||||| || |||
Sbjct 2650 ATCAGTAAAGGTGCATCTAAAGGAAACTCGTCTCCAGTTAAAAAGACAGCAGAAAAGGAG 2709
Query 2730 AAATGTATTGTCCCCAAAACGCCTGCAAAAAGGGGTCGTGCAGGGAGaaaaaaaTCAGTA 2789
|||||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||||
Sbjct 2710 AAATGTATTGTCCCAAAAACGCCTGCAAAAAAGGGTCGAGCAGGTAGAAAAAAATCAGTA 2769
Query 2790 CCTCCGTCTGCTCATGCCTCAGAGATCCAGCTTTGGCAACCTACACCTCCAAAGACACCT 2849
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2770 CCTCCGCCTGCTCATGCCTCAGAGATCCAGCTTTGGCAACCTACTCCTCCAAAGACACCT 2829
Query 2850 TCATCAAGAAGCAAGGCTAAAGAAAAAGGGAGGATGTCCATTCAAGATTCAGGAAAAGCA 2909
| ||||||||||||| |||||| ||||||||| | |||||| ||||||||||||||||||
Sbjct 2830 TTATCAAGAAGCAAGCCTAAAGGAAAAGGGAGAAAGTCCATACAAGATTCAGGAAAAGCA 2889
Query 2910 AGAGGTCCATCAGGAGAACTTCTATGTCTGGATTCTATTGCGGAAATAATATACAGGATG 2969
||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||
Sbjct 2890 AGAGGTCCATCAGGAGAACTTCTGTGTCAGGATTCTATTGCGGAAATAATTTACAGGATG 2949
Query 2970 CAGAATCTGAATCTAGGAGACAAA-AACAGAGAACAAGAGCAAAATGCACTTGTCTTGTA 3028
|| |||||| |||||||||||||| || ||||||||||||||||||||| | ||||||||
Sbjct 2950 CAAAATCTGTATCTAGGAGACAAAGAA-AGAGAACAAGAGCAAAATGCAATGGTCTTGTA 3008
Query 3029 CAGAGGAGATGGTGCGGTTGTTCCATATGAGAGCAAGAAGCAAAAACCAAGGCCTAAAGT 3088
|| |||||||||||| ||||||| |||||||||||||||| ||||||||| || |||||
Sbjct 3009 CAAAGGAGATGGTGCACTTGTTCCCTATGAGAGCAAGAAGCGAAAACCAAGACCCAAAGT 3068
Query 3089 TGACCTTGATGATGAAACAACTCGGATATGGAATC-TATTGATGGGTaaa-g-ga-gaaa 3144
|||| |||| |||||||||||||| |||||||| | || ||||||| ||| | || ||||
Sbjct 3069 TGACATTGACGATGAAACAACTCGCATATGGAA-CTTACTGATGGGGAAAGGAGATGAAA 3127
Query 3145 aagagggggatgaagagatggataagaaa-aaagagaagtggtgggaagaagagaggaga 3203
|||| ||||||||||||| |||||| ||| ||||||||||||||||||||||| || |||
Sbjct 3128 AAGAAGGGGATGAAGAGAAGGATAA-AAAGAAAGAGAAGTGGTGGGAAGAAGAAAGAAGA 3186
Query 3204 gTTTTCCGAGGAAGGGCCGATTCATTCATCGCCCGTATGCATCTTGTACAAGGAGATAGA 3263
|| |||||||||||||| ||||| |||||||| || ||||| || |||||||||||||||
Sbjct 3187 GTCTTCCGAGGAAGGGCTGATTCCTTCATCGCTCGCATGCACCTGGTACAAGGAGATAGA 3246
Query 3264 CGTTTTTCGCCATGGAAGGGATCAGTGGTTGATTCGGTCATTGGAGTTTTCCTTACACAG 3323
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3247 CGTTTTTCGCCATGGAAGGGATCGGTGGTTGATTCGGTCATTGGAGTTTTCCTTACACAG 3306
Query 3324 AATGTCACGGATCACCTTTCAAGCTCTGCTTTCATGTCTCTAGCTGCTCGATTCCCTCCA 3383
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3307 AATGTCTCGGATCACCTTTCAAGCTCTGCGTTCATGTCTCTAGCTGCTCGATTCCCTCCA 3366
Query 3384 AAATCAAACAGCAGCCGAGAAGATGAAAGGAATGTTAGAAGCGTAGTTGTTGAAGATCCA 3443
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3367 AAATTAAGCAGCAGCCGAGAAGATGAAAGGAATGTTAGAAGCGTAGTTGTTGAAGATCCA 3426
Query 3444 GAAGGATGCATTCTGAACTTAAATGAAATTCCTTCGTGGCAGGAAAAGGTTCAAAATCCA 3503
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3427 GAAGGATGCATTCTGAACTTAAATGAAATTCCTTCGTGGCAGGAAAAGGTTCAACATCCA 3486
Query 3504 TCTGACATGGAAGTCTCTGGGGTTGATAGTGGATCAAAAGAGCAACAAAGGGACTGTTCA 3563
|||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 3487 TCTGACATGGAAGTTTCTGGGGTTGATAGTGGATCAAAAGAGCAGCTAAGGGACTGTTCA 3546
Query 3564 AACTCTGGAATCGAAAGATTTAATTTCTTAGAGAAGAGTAGTCAAAATTTAGAAGAGGAA 3623
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 3547 AACTCTGGAATTGAAAGATTTAATTTCTTAGAGAAGAGTATTCAAAATTTAGAAGAGGAA 3606
Query 3624 GTATTATCATCACAAGATTCTTTTGATCCTGCGATATTTCAGTCGTGTGGGAGAGTTGGA 3683
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3607 GTATTATCATCACAAGATTCTTTTGATCCGGCGATATTTCAGTCGTGTGGGAGAGTTGGA 3666
Query 3684 TCCTG-TCTATGTTCCAAATCAGACGCAGAGTTTTCTACAACCAGGTGTGAAACAAAAAC 3742
||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3667 TCCTGTTC-ATGTTCCAAATCAGACGCAGAGTTTCCTACAACCAGGTGTGAAACAAAAAC 3725
Query 3743 TGTCAGTGGATCATCACAATCAGTGCAAACTGGGAGTCCAAACTTGTCTGATGAAATTTG 3802
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3726 TGTCAGTGGAACATCACAATCAGTGCAAACTGGGAGCCCAAACTTGTCTGATGAAATTTG 3785
Query 3803 TCTTCAAGGGAATGAGAGACCGCTTCTATATGATGGATCTGGTGATGTTCAGAAACAAGA 3862
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 3786 TCTTCAAGGGAATGAGAGACCGCATCTATATGAAGGATCTGGTGATGTTCAGAAACAAGA 3845
Query 3863 AACTGCAAATGTCGCTCAGAAGAAACCTGATCTCGACAAAATAATGAACTGGAAGGACTC 3922
|||| |||||||||||||||||||||||||||| || |||| |||||| ||||| |||||
Sbjct 3846 AACTACAAATGTCGCTCAGAAGAAACCTGATCTTGAAAAAACAATGAATTGGAAAGACTC 3905
Query 3923 TCTCTCTTTTGGTCAGCCAAGCAATGATACTAATTGGCaaaaaaaaGGACCGACCAATCC 3982
| ||| ||||||||||||||| |||||||||||||||| || | | | | |||
Sbjct 3906 TGTCTGTTTTGGTCAGCCAAGAAATGATACTAATTGGC------AA--A-C-A--ACTCC 3953
Query 3983 TTCCAGCAGCTATGAGCAGAGTACGATTCAACAGCCACATGTAATAGACATAGAGGATTT 4042
||||||||||||||||||| || ||| || ||||||||||||| ||||||||||||||||
Sbjct 3954 TTCCAGCAGCTATGAGCAGTGTGCGACTCGACAGCCACATGTACTAGACATAGAGGATTT 4013
Query 4043 TGGAATGCAAGGTGAAGGCCTTGGTTATCCTTGGCTGTCCATTTCACCAAGAGTTGACAG 4102
|||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||
Sbjct 4014 TGGAATGCAAGGTGAAGGCCTTGGTTATTCTTGGATGTCCATCTCACCAAGAGTTGACAG 4073
Query 4103 AGGAAAGAACAAAAACGTACCACGCAGATTTTTCAGACAAGGTGGAAGTGTTCCAAGAGA 4162
|| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4074 AGTAAAGAACAAAAATGTACCACGCAGGTTTTTCAGACAAGGTGGAAGTGTTCCAAGAGA 4133
Query 4163 ATTCACAGGTCAGATCATATCATCAACGCCTCATGAAATGCTAGGAATGGGATTGTTTGC 4222
||||||||||||||||||| ||||||||||||||||| | | |||||||||||||| |
Sbjct 4134 ATTCACAGGTCAGATCATACCATCAACGCCTCATGAATTACCAGGAATGGGATTGTCCGG 4193
Query 4223 TTCCTCAAGCGCCCTCCAAGTGCACCAGGACGATACCCAACATAATCAACAAGATGAGAT 4282
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 4194 TTCCTCAAGCGCCGTCCAAGAACACCAGGACGATACCCAACATAATCAACAAGATGAGAT 4253
Query 4283 GAATAAAGCATCCCATTTACAAAAAACATTTATGGATCTGCTCAACTCTTCTGAAGAATG 4342
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct 4254 GAATAAAGCATCCCATTTACAAAAAACATTTTTGGATCTGCTCAACTCCTCTGAAGAATG 4313
Query 4343 CCTTACAAGACAGTCCAGTACCAAACAGAACATCACGGATGGCTGCCTACCGAGAGATAG 4402
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 4314 CCTTACAAGACAGTCCAGTACCAAACAGAACATCACGGATGGCTGTCTACCGAGAGATAG 4373
Query 4403 AACTGCTGAAAACGTGGTTGATCCCCTCAGTAAAAATACAAGCTTACAGAACATATTGGT 4462
|||||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||||||
Sbjct 4374 AACTGCTGAAGACGTGGTTGATCCGCTCAGTAACAATTCAAGCTTACAGAACATATTGGT 4433
Query 4463 CGAATCGAATTCCAGCAATAAAGAGCAGACAGCAGTTGAATACAACGAGACAAATGCCAC 4522
|||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 4434 CGAATCAAATTCCAGCAATAAAGAGCAGACGGCAGTTGAATACAAGGAGACAAATGCCAC 4493
Query 4523 TATTGTACGAGAGATGAAAGGGACGCTTGCTGATGGGAGAAAGCCTAAAAGCCAGTGGGA 4582
|||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 4494 TATTTTACGAGAGATGAAAGGGACGCTTGCTGATGGGAAAAAGCCTACAAGCCAGTGGGA 4553
Query 4583 TAGTCTCAGAAAAGATGTGGAGGTGAATGAAGGGAGAAAGGAAAGAAGCAAAGACAGTAT 4642
||||||||||||||||||||||| ||||||||||||| ||||| ||| |||| ||| |||
Sbjct 4554 TAGTCTCAGAAAAGATGTGGAGGGGAATGAAGGGAGACAGGAACGAAACAAAAACAATAT 4613
Query 4643 GGATTCCATAGACTATGAAGCAATAAGACGTGCTAGTATCAGTGAGATTTCTGATGCTAT 4702
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 4614 GGATTCCATAGACTATGAAGCAATAAGACGTGCTAGTATCAGCGAGATTTCTGAGGCTAT 4673
Query 4703 CAAGGAAAGAGGAATGAACAACATGTTGGCGGTACGAATTAAGGATTTCCTAGAAAGAAC 4762
|||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| | |
Sbjct 4674 CAAGGAAAGAGGGATGAATAACATGTTGGCCGTACGAATTAAGGATTTCCTAGAACGGAT 4733
Query 4763 AGTTAAAGATCATGGTGGTATCGACCTTGAATGGTTGAGAG-ATGTTCCTCCTGATAAAG 4821
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 4734 AGTTAAAGATCATGGTGGTATCGACCTTGAATGGTTGAGAGAAT-CTCCTCCTGATAAAG 4792
Query 4822 CCAAGGACTATCTCCTGAGCATAAGAGGTCTGGGTTTGAAAAGTGTTGAATGCGTGCGAC 4881
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4793 CCAAGGACTATCTCTTGAGCATAAGAGGTCTGGGTTTGAAAAGTGTTGAATGCGTGCGAC 4852
Query 4882 TCTTAACGCTCCACAACCTTGCTTTCCCTGTTGACACGAATGTTGGAAGGATAGCCGTTA 4941
||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 4853 TCTTAACACTCCACAATCTTGCTTTCCCTGTTGACACGAATGTTGGAAGGATAGCAGTTA 4912
Query 4942 GGCTGGGATGGGTGCCTCTACAACCTCTACCTGAATCACTTCAGTTACACCTTCTAGAGC 5001
|| |||||||||||||||||||||| |||||||||||||||||||||||||| || ||||
Sbjct 4913 GGATGGGATGGGTGCCTCTACAACCCCTACCTGAATCACTTCAGTTACACCTCCTGGAGC 4972
Query 5002 TATACCCTGTGCTTGAGTCCATCCAAAAATTTCTTTGGCCAAGACTCTGCAAACTCGATC 5061
||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 4973 TATACCCAGTGCTCGAGTCCATCCAAAAATTTCTTTGGCCAAGACTTTGCAAACTCGATC 5032
Query 5062 AACCAACACTGTATGAATTACACTACCAGCTGATTACGTTTGGAAAGGTATTTTGCACAA 5121
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 5033 AACGAACACTGTATGAATTACACTACCAACTGATTACGTTTGGAAAGGTATTTTGCACAA 5092
Query 5122 AGAGTAGACCAAATTGTAATGCATGTCCAATGAGAGGAGAATGCAGACACTTTGCCAGTG 5181
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 5093 AGAGTAGACCAAATTGTAATGCATGTCCAATGAGAGGAGAGTGCAGACACTTTGCCAGTG 5152
Query 5182 CTTATGCTAGTGCAAGACTTGCTTTACCGGCACCGGCACCAGACGAGAGGAGCTTAACAA 5241
||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 5153 CTTATGCTAGTGCAAGACTTGCTTT------ACCGGCACCAGAGGAGAGGAGCTTAACAA 5206
Query 5242 GTGCAACTATTCCGGTCCCTCCCAAGTCCTTTCCTCCTGTAGCCATCCCGATGATAGAAC 5301
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 5207 GTGCAACTATTCCGGTCCCTCCCGAGTCCTATCCTCCTGTAGCCATCCCGATGATAGAAC 5266
Query 5302 TACCTCTTCCGTTGGAGAAAGCCCTAGCAAGGGGCGCACCATCGAATAGAGAAAACTGTG 5361
|||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||
Sbjct 5267 TACCTCTTCCGTTGGAGAAATCCCTAGCAAGTGGAGCACCATCGAATAGAGAAAACTGTG 5326
Query 5362 AACCAATAATTGAAGAGCCGGCCTCGCCCGGGCAAGAATGCACTGAGATAACAGAGAGTG 5421
||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct 5327 AACCAATAATTGAAGAGCCGGCCTCGCCCGGGCAAGAGTGCACTGAAATAACCGAGAGTG 5386
Query 5422 ATATTGAAGATGCTTACTACAATGAGGACCCTGACGAGATCCCAACAATAAAACTCAACA 5481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5387 ATATTGAAGATGCTTACTACAATGAGGACCCTGACGAGATCCCAACAATAAAACTCAACA 5446
Query 5482 TTGAACAGTTCGGAATGACTCTACGGGAACACATGGAAAGAAACATGGAGCTCCAAGAAG 5541
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5447 TTGAACAGTTTGGAATGACTCTACGGGAACACATGGAAAGAAACATGGAGCTCCAAGAAG 5506
Query 5542 GTGACATGTCCAAGGCTTTGGTTGCTTTGAATCCAACCACTACTTCTATTCCAACTCCCA 5601
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 5507 GTGACATGTCCAAGGCTTTGGTTGCTTTGCATCCAACAACTACTTCTATTCCAACTCCCA 5566
Query 5602 AACTAAAGAACATTAGCCGTCTCAGGACAGAGCACCAAGTATACCAGCTCCCGGATTCAC 5661
|||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||
Sbjct 5567 AACTAAAGAACATTAGCCGTCTCAGGACAGAGCACCAAGTGTACGAGCTCCCAGATTCAC 5626
Query 5662 ATCCTCTCCTCGATGGTATGGATAAAAGAGAACCAGATGATCCAAGTCCTTATCTCCTAG 5721
||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 5627 ATCGTCTCCTTGATGGTATGGATAAAAGAGAACCAGATGATCCAAGTCCTTATCTCTTAG 5686
Query 5722 CTATTTGGACACCAGGTGAAACAGCGAATTCGGCTCAACCGCCTGAACAGAAGTGTGGAG 5781
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 5687 CTATATGGACACCAGGTGAAACAGCGAATTCGGCACAACCGCCTGAACAGAAGTGTGGAG 5746
Query 5782 GGAAAGCGTCTGGCAAAATGTGCTTTGACGAGACTTGTTCTGAGTGCAACAGTGTGAGGG 5841
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 5747 GGAAAGCGTCTGGCAAAATGTGCTTTGACGAGACTTGTTCTGAGTGTAACAGTCTGAGGG 5806
Query 5842 AAGCAAACTCACAGACAGTTCGAGGGACTCTTTTGATACCTTGTCGAACTGCCATGAGAG 5901
||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||
Sbjct 5807 AAGCAAACTCACAGACAGTTCGAGGAACTCTTCTGATACCTTGTCGGACTGCCATGAGAG 5866
Query 5902 GAAGTTTTCCGCTCAACGGGACATACTTTC-AAGTTAACGAGTTATTTGCAGACCACGAG 5960
||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||
Sbjct 5867 GAAGTTTTCCGCTCAACGGGACATA-TTTCCAAGTCAACGAGTTATTTGCAGACCACGAG 5925
Query 5961 TCCAGTCTCAATCCCATCGATGTTCCTAGAGATTGGATATGGGATCTCCCGAGAAGGACT 6020
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 5926 TCCAGTCTCAAACCCATCGATGTTCCTAGAGATTGGATATGGGATCTCCCAAGAAGGACT 5985
Query 6021 GTTTACTTCGGAACATCAGTAACATCAATATTCAGAGGTCTTTCAACGGAGCAGATACAA 6080
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5986 GTTTACTTCGGAACATCAGTAACATCAATATTCAGAGGTCTTTCAACGGAGCAGATACAG 6045
Query 6081 TTCTGCTTTTGGAAAGGATTCGTATGTGTCCGTGGATTCGAACAGAAGACAAGAGCACCA 6140
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6046 TTCTGCTTTTGGAAAGGATTCGTATGTGTCCGTGGATTCGAACAGAAGACAAGAGCACCG 6105
Query 6141 CGTCCATTAATGGCAAGGTTGCATTTTCCGGCGAGCAAATTGAAGAACAACAAAATCTGA 6200
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
Sbjct 6106 CGTCCATTAATGGCAAGGTTGCATTTTCCTGCGAGCAAATTGAAGAACAACAAAACCTAA 6165
Query 6201 TGATGAATGGATTAAAGAAAACACATTGCTTCTCTGCTCTCCTCTATTTAAAGGCAAGGA 6260
||||| |||| |||| |||| |||||||||||||||||||||||||||||| || |||
Sbjct 6166 AGATGACTGGAAGAAAGCAAACGCATTGCTTCTCTGCTCTCCTCTATTTAAAGCCA-GGA 6224
Query 6261 AAAGACCCATTTAGGCATAAAAACAGGAAACCAAATAGGCTTCttttttttttCTCTTTC 6320
|||| ||||||||| ||||| |||||||| ||||||||||| |||| |||||||
Sbjct 6225 AAAGTCCCATTTAGACATAATAACAGGAATCCAAATAGGCTA-TTTT------CTCTTTC 6277
Query 6321 TTTCTGACTTCATTCTTAGAGAAGAAGCAACACAAACAAGTTTTTTGGGTTATTTATTTT 6380
||||| | ||||||| ||||| |||||| ||||||| |||||||||||||||||||||||
Sbjct 6278 TTTCTTATTTCATTCATAGAGCAGAAGCGACACAAAAAAGTTTTTTGGGTTATTTATTTT 6337
Query 6381 CTCTCTAACAAATTTGTAGCATTT-GGGTCTTTTT--GGTTGTCACTAGCGTGGCAAATC 6437
|||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||
Sbjct 6338 CTCTCTAACAAATTTGTAGCGTTTTGGGTCTTTTTCTGGCTGTCACTAGCGTGGCAAATC 6397
Query 6438 CAATGCCTGCGCACAC--AGGCGCATTGTCAATAAA-TTTCTCCGGCCACCGGAGTATTT 6494
||||| |||||||||| |||||||||||||||||| ||||||||||||||||||| |||
Sbjct 6398 CAATGTCTGCGCACACTTAGGCGCATTGTCAATAAAATTTCTCCGGCCACCGGAGTGTTT 6457
Query 6495 AGCATCTTTCAACCGGCG 6512
||||||||| ||||||||
Sbjct 6458 AGCATCTTTTAACCGGCG 6475
Score = 1598 bits (865), Expect = 0.0
Identities = 1096/1201 (91%), Gaps = 42/1201 (3%)
Strand=Plus/Plus
Query 1 CATTGACTCGCCTGAGAATCAG-AAGCTTAGATCGATTCTTAGTTAATGTCGCCTTCTCT 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1 CATTGACTCGCCTGAGAATCAGAAAGCTTAGATCGATTCTTAGTTAATGTCGCCTTCTCT 60
Query 60 TCCCAAGTTTGATT-TAAAGGAGTGTTCGTCCATGTAGCTTGGTTTTGGTGTTTGGTGAG 118
|||||| |||| |||||||||||||||||||| |||| |||||||||||||| |||
Sbjct 61 AACCAAGTCAGATTAAAAAGGAGTGTTCGTCCATGTTGCTTTGTTTTGGTGTTTGGAGAG 120
Query 119 AGTTTTCGGAGAGTTAGGTAGA-AG-CATTT-GGGTGAGGTAGTGATAAGG-TTGAAGGG 174
||||||||||||||||||| || | |||| ||||||||||||||||||| ||||||||
Sbjct 121 AGTTTTCGGAGAGTTAGGT-GAGTGTTATTTGGGGTGAGGTAGTGATAAGGTTTGAAGGG 179
Query 175 GGAGTGATTCATTGGTTCCACACTAGTGTGGTATGAATTCGAGGACTGATCCCGGGGATG 234
||||||||||| | || |||||| ||||||||||||| ||||||| ||||||
Sbjct 180 GGAGTGATTCA-----T---CA--AGTGTGTTATGAATTCGAGGGCTGATCCGGGGGATA 229
Query 235 GCTATTTTCGACTTCCTTTGGAGAATCAAACCCAACATGAGTTCCAATTCATGGGTTCTT 294
| ||||||||| ||||||||||||||||||| ||||| || | |||||||||||||
Sbjct 230 GATATTTTCGAGTTCCTTTGGAGAATCAAACTCAACA--AG----AGTTCATGGGTTCTT 283
Query 295 GGATTCCATTTACACCCAAGAAACCTCTTCAAGGTGGTGGTAGATCAAGTCTGATCGTAG 354
||||||||||||||||||| ||| | | ||||||||||||||| ||||
Sbjct 284 GGATTCCATTTACACCCAA-AAA--AC--C----------TAGATCAAGTCTGATGGTAG 328
Query 355 ATGAGAGACTGATACACCAGGATCTAAATGTGG-TTCCAGGTGTTGAATTTGTAGAGAGG 413
|||||||| ||||| ||||||||||||||| || ||||||||| |||||||||||| |||
Sbjct 329 ATGAGAGAGTGATAAACCAGGATCTAAATG-GGTTTCCAGGTGGTGAATTTGTAGACAGG 387
Query 414 GCATTCTGCAACAGTGGTGTGGATCATAATGGGGTTTATGACCATGGTGCTCATCAGGGC 473
| ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 388 GGATTCTGCAACACTGGTGTGGATCATAATGGGGTTTTTGATCATGGTGCTCATCAGGGC 447
Query 474 GTGACCAACTTAAATATGATGATTAATAGCTTAGCGGGATCACATGCACAGGCTAGGAGT 533
|| |||||||||| ||||||||| |||||||||||||||||||||||||| ||| |||||
Sbjct 448 GTTACCAACTTAAGTATGATGATCAATAGCTTAGCGGGATCACATGCACAAGCTTGGAGT 507
Query 534 AATAGTGAGAGAGATCTTTTGGGCAGGAGTGATGTGACTTCTCCTTTAGCACCCGTTATC 593
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 508 AATAGTGAGAGAGATCTTTTGGGCAGGAGTGAGGTGACTTCTCCTTTAGCACCAGTTATC 567
Query 594 AGAAACACCACCAGTAATATAGAGCCGGTCAATGGAAAATTTT-CTTCAAATGTGGGTAT 652
|||||||||||| ||||| |||||||||||||||| ||||||| ||||| ||||||||||
Sbjct 568 AGAAACACCACCGGTAATGTAGAGCCGGTCAATGG-AAATTTTACTTCAGATGTGGGTAT 626
Query 653 GGTAAACGGTCCTTTCACCCAGAGTGGCAGTTCTCAAGCTGGCTATACTGAGTTTGAATT 712
|||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 627 GGTAAATGGTCCTTTCACCCAGAGTGGCACTTCTCAAGCTGGCTATAATGAGTTTGAATT 686
Query 713 GGACGACTTGTTGAATCCCGATCATATGCCCTTCTCCTTCACAAGCTTGCTGAGTGGTGG 772
||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 687 GGATGACTTGTTGAATCCTGATCAGATGCCCTTCTCCTTCACAAGCTTGCTGAGTGGTGG 746
Query 773 GGATAGCTTATTCCAGGTTCGTCAATATGGAACTCCAGCGTGTAGCAAGCCTCTTTACTA 832
||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |
Sbjct 747 GGATAGCTTATTCAAGGTTCGTCAATATGGACCTCCAGCGTGTAACAAGCCTCTTTACAA 806
Query 833 TTTGAATTCACCAATCAGAAGAGAAGCAGTTGGGTCAGTCTGTGAAAGTTCGTTTCAATA 892
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 807 TTTGAATTCACCAATTAGAAGAGAAGCAGTTGGGTCAGTCTGTGAAAGTTCGTTTCAATA 866
Query 893 TGTACCGTCAACCCCCAGTCTGTGCAGAACAGGTGAAAAGAATGGATTCCTTGAACAGAT 952
|||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 867 TGTACCGTCAACGCCCAGTCTGTTCAGAACAGGTGAAAAGACTGGATTCCTTGAACAGAT 926
Query 953 AGTTACAACCATTGGACATGAAATCACAGAGCCGAAATCTGACAAAAGTATGCAGAGCAT 1012
||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 927 AGTTACAACTACTGGACATGAAATCCCAGAGCCGAAATCTGACAAAAGTATGCAGAGCAT 986
Query 1013 TATGGACGCGTCTGCTGTTAATGCGACGGAAGTTACTGAACAAAATGATGGCAGCAGACA 1072
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 987 TATGGACTCGTCTGCTGTTAATGCGACGGAAGCTACTGAACAAAATGATGGCAGCAGACA 1046
Query 1073 AGATGTTCTGGAGTTTGATCTTAACAAGACACCTCAGCAGAAACCCTCCAAAAGGAAAAA 1132
||||||||||||||| || |||||||| || ||||||||||||||||||||||||||||
Sbjct 1047 AGATGTTCTGGAGTTCGACCTTAACAAAACTCCTCAGCAGAAACCCTCCAAAAGGAAAAG 1106
Query 1133 GAAGTTCATGCCCAAGGTGGTCGTGGAAGGCAAACCTAAAAGGAAGCCACGCAAACCTGC 1192
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1107 GAAGTTCATGCCCAAGGTGGTCGTGGAAGGCAAACCTAAAAGAAAGCCACGCAAACCTGC 1166
Query 1193 A 1193
|
Sbjct 1167 A 1167
Score = 1293 bits (700), Expect = 0.0
Identities = 834/896 (93%), Gaps = 19/896 (2%)
Strand=Plus/Plus
Query 1143 CCCAAGGTGGTCGTGGAAGGCAAACCTAAAAGGAAGCCACGCAAACCTGCAACTCAGgaa 1202
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1174 CCCAAAGTGGTCGTGGAAGGCAAACCTAAAAGGAAGCCACGCAAAGCTGCAACTCAGGAA 1233
Query 1203 aaagtgaattctaaagaaaccgggagtggcaaaaggaaaaaagctcaaaagacaaacttg 1262
|||||||| |||||||||||||||||| || |||||| | | ||| |||
Sbjct 1234 AAAGTGAAATCTAAAGAAACCGGGAGT-GC------CAAAAAG------A-A-AAATTTG 1278
Query 1263 aaagaatcagcaactaaaaagCCAGCCCATGTTGGAGATATGAGCAACAAAAGCCCTGAA 1322
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1279 AAAGAATCAGCAACTAAAAAGCCAGCCAATGTTGGAGATATGAGCAACAAAAGCCCTGAA 1338
Query 1323 GTCACACTCAAAAGTTGCAGAAAAGCTTTGAATTTTGACTTGGAGAAAT-CTGGAGATGC 1381
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 1339 GTCACACTCAAAAGTTGCAGAAAAGCTTTGAATTTTGACTTGGAG-AATCCTGGAGATGC 1397
Query 1382 GAGGCAAGGTGACTCTGAGTTTGAAATTGTCCAGAACAATAATGGCGCAAACTCATTTTC 1441
|||||||||||||||||||| ||||||||||||||||| || |||||||||||| |||||
Sbjct 1398 GAGGCAAGGTGACTCTGAGTCTGAAATTGTCCAGAACAGTAGTGGCGCAAACTCGTTTTC 1457
Query 1442 TGAGATCAGAGATGCCATTGGTGGAACTAATGGTAGTTTTCTGGATTCAGTGACACAAAT 1501
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 1458 TGAGATCAGAGATGCCATTGGTGGAACTAATGGTAGTTTCCTGGATTCAGTGTCACAAAT 1517
Query 1502 AGGCCAGACCAATGGATTGGTGGCTACGTACCAGCCACATGAAGTGTCAATGGGAAACCA 1561
|| | ||||||||||||||| ||||| | ||||||||| |||||||||||||||||||||
Sbjct 1518 AGACAAGACCAATGGATTGGGGGCTATGAACCAGCCACTTGAAGTGTCAATGGGAAACCA 1577
Query 1562 GCCAGATAAACTATCAAC-GGAAGCGAAACTGGCCAGAGACCAGCAACCTGATTTATTGA 1620
||||||||||||||| || || ||||||||||||||||||||| ||||||||||||||||
Sbjct 1578 GCCAGATAAACTATCTACAGG-AGCGAAACTGGCCAGAGACCAACAACCTGATTTATTGA 1636
Query 1621 CTAGAAACCAGCAATGCCAGTTCCCAGTGGGAACCCAGAACACCCAGTTCCCAATGGGAA 1680
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1637 CTAGAAACCAGCAATGCCAGTTCCCAGTGGCAACCCAGAACACCCAGTTCCCAATGGAAA 1696
Query 1681 ACCAACAAGCTTGGCTTCAGATGAAAAACCAACTTATTGGCTTTCCATTCGGTAACCAGC 1740
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1697 ACCAACAAGCTTGGCTTCAGATGAAAAACCAACTTATTGGCTTTCCATTTGGTAACCAGC 1756
Query 1741 AACCTCGCATGACCATAAGAAACCAGCAGCCTTGCTTGGCCATGGGTAATCAACAACCTA 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1757 AACCTCGCATGACCATAAGAAACCAGCAGCCTTGCTTGGCCATGGGTAATCAACAACCTA 1816
Query 1801 TGTATCTGATAGGAACTCCACGGCCTGCATTGGTGAGTGGAAACCAGCAACTAGGAGGTC 1860
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1817 TGTATCTGATAGGAACTCCACGGCCTGCATTAGTAAGTGGAAACCAGCAACTAGGAGGTC 1876
Query 1861 TCCAAGGGAACAAGCAGCCTATATTTTTGAATCAGCAGACTTGTTTACCTGCTGGAAATC 1920
|||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1877 CCCAAGGAAACAAGCGGCCTATATTTTTGAATCACCAGACTTGTTTACCTGCTGGAAATC 1936
Query 1921 AACAATATGGATCACCGACAGACATGTATCAGCTTGTTATGTCAACCGGAGGGCAACAAC 1980
| | |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 1937 AGCTATATGGATCACCTACAGACATGCATCAACTTGTTATGTCAACCGGAGGGCAACAAC 1996
Query 1981 ATGGACTACGGATGAAAAACCAGCAACCTGGATTTTTGTTGAGAAACCAGCAGCCT 2036
||||||||| ||| ||||||||||||||||||| || | ||| ||||||||||
Sbjct 1997 ATGGACTACTGATAAAAAACCAGCAACCTGGATCATTAATAAGAGGCCAGCAGCCT 2052
> AT3G10010.1 | Symbols: DML2 | demeter-like 2 | chr3:3081814-3088195
REVERSE LENGTH=4184
Length=4184
Score = 207 bits (112), Expect = 8e-52
Identities = 392/522 (75%), Gaps = 39/522 (7%)
Strand=Plus/Plus
Query 4708 AAA-GAGGAATGAACAACATG-TTGGCGGTACGAATTAAGGATTTCCTAGAA-AGAAC-A 4763
||| |||| |||||||||||| || || | | |||| |||| ||| || || || || |
Sbjct 2500 AAACGAGGGATGAACAACATGCTT-GCCGAAAGAATCAAGGCCTTCTTA-AACAG-ACTA 2556
Query 4764 GTTAAAGATCATGGTGGTATCGACCTT-GAATGGTTGAGAGATGTTCCTCCTGATAAAGC 4822
|||||| | ||||| | || || ||| || ||| | |||||||||||||||||||||||
Sbjct 2557 GTTAAAAAACATGGAAGCATTGA-CTTAGAGTGGCTAAGAGATGTTCCTCCTGATAAAGC 2615
Query 4823 CAAGGACTATCTCCTGAGCATAAGA-GG-TCTGGGTTTGAAAAGTGTTGAATGCGTGCGA 4880
|||||| ||||| || ||||||| | || | | || ||||| ||||| || || || ||
Sbjct 2616 CAAGGAGTATCTACTAAGCATAA-ACGGAT-TAGGATTGAAGAGTGTGGAGTGTGTTAGA 2673
Query 4881 CTCTTAACGCTCCA-CA-ACCTTGCTTTCCCTGTTGACACGAATGTTGGAAGGATAGCCG 4938
|| || | || || || | |||| |||||||||||||||||||| ||| | ||||| |
Sbjct 2674 CTTTTGTCACTACATCAGA--TTGCATTCCCTGTTGACACGAATGTCGGACGCATAGCTG 2731
Query 4939 TTAGGCTGGGATGGGTGCCTCT-ACAACC-TCTACCTGAATCA-CTTCAGTTACACCTTC 4995
| || || |||||||| || || ||| || | | || || | || || | || |||
Sbjct 2732 TAAGACTAGGATGGGTTCC-CTTACAGCCAT-TGCCCGACG-AGCTGCAAATGCATCTTT 2788
Query 4996 TAGAGCTATACCCTGTGCTTGAGTCCA-TCCAAAAATTTCTTTGGCCAAGACTCTGCAAA 5054
||||| | ||||| || || ||||| | | ||||| | || |||||| | ||||||||
Sbjct 2789 TAGAGTTGTACCCAGTTCTAGAGTC-AGTTCAAAAGTACCTCTGGCCACGCCTCTGCAAG 2847
Query 5055 CTCGATCAACCAACACT-GTATGAATTACACTACCAGC-TGATTACGTTTGGAAAGGTAT 5112
|| || ||| ||| || ||| || | || ||||| | |||| || ||||||||||| |
Sbjct 2848 CTTGACCAAAAAAC-CTTGTACGAGCTGCATTACCA-CATGATAACATTTGGAAAGGTCT 2905
Query 5113 TTTGCACAAAGAGTAGA-CCAAATTGTAATGCATGTCCAATGAGAGGAGAA-TG-CAGAC 5169
|||||||||| |||| | || ||||| |||||||||||||||| ||| | | || | |||
Sbjct 2906 TTTGCACAAA-AGTAAAACCCAATTGCAATGCATGTCCAATGA-AGGCGGAGTGTC-GAC 2962
Query 5170 ACTTTGC-C-AGTGCTTATGCTAGTGCAAGACTTGCTTTACC 5209
| || | | ||||| ||| || ||| | |||||||||||
Sbjct 2963 A-TTA-CTCTAGTGCACGTGCAAGCGCACGGCTTGCTTTACC 3002
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 325064583044
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5