BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487306
Length=3586
Score E
Sequences producing significant alignments: (Bits) Value
AT5G05170.1 | Symbols: CESA3, IXR1, ATCESA3, ATH-B, CEV1 | Cell... 5834 0.0
AT5G09870.1 | Symbols: CESA5 | cellulose synthase 5 | chr5:3073... 538 1e-151
AT2G21770.1 | Symbols: CESA9, CESA09 | cellulose synthase A9 | ... 267 7e-70
> AT5G05170.1 | Symbols: CESA3, IXR1, ATCESA3, ATH-B, CEV1 | Cellulose
synthase family protein | chr5:1530174-1535414 REVERSE
LENGTH=3639
Length=3639
Score = 5834 bits (3159), Expect = 0.0
Identities = 3472/3618 (96%), Gaps = 41/3618 (1%)
Strand=Plus/Plus
Query 2 GAGACAAATAGCTTGCTCTTTGCATCTTC-T----A----AAGATTCTCCTCTTCGTCTT 52
||||||||||||||||||||||||||||| | | ||||||||||||||||||||
Sbjct 12 GAGACAAATAGCTTGCTCTTTGCATCTTCTTAGCCATCCCAAGATTCTCCTCTTCGTCTT 71
Query 53 CCTTACTTATACATATCTCTCTGCAGAGAAGAAAGCTCGGATCCAGAAAGAGAGAGATTC 112
||||| || || |||||||||| ||||||||||||| ||||||||| |||||||||||
Sbjct 72 CCTTA--TAAAC-TATCTCTCTGTAGAGAAGAAAGCTTGGATCCAGATTGAGAGAGATTC 128
Query 113 AGAGAGTCACATCA-C-CACTCCTTCTTCAGATCTCATGATTTGAACTATTCCGACGTTT 170
|||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 129 AGAGAGTCACATCACCACACTCCATCTTCAGATCTCATGATTTGAACTATTCCGACGTTT 188
Query 171 CGGTGTTGGAAGCAACTAAGTGACGACGAATGGAATCCGAAGGAGAAACCGCGGGGAAGC 230
|||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||
Sbjct 189 CGGTGTTGGAAGCAACTAAGTGAC-A--AATGGAATCCGAAGGAGAAACCGCGGGAAAGC 245
Query 231 CGATGAAGAATGTTGTTCCGCAGATTTGCCAGATCTGTAGTGACAATGTTGGCAAGACTG 290
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 246 CGATGAAGAACATTGTTCCGCAGACTTGCCAGATCTGTAGTGACAATGTTGGCAAGACTG 305
Query 291 TTGATGGAGATCCTTTTGTGGCTTGTGATTTTTGTTCATTCCCAGTTTGTCGGCCTTGCT 350
|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 306 TTGATGGAGATCGTTTTGTGGCTTGTGATATTTGTTCATTCCCAGTTTGTCGGCCTTGCT 365
Query 351 ATGAGTATGAGAGGAAAGATGGGAATCAATCTTGTCCTCAGTGCAAAACCAGATACAAGA 410
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366 ACGAGTATGAGAGGAAAGATGGGAATCAATCTTGTCCTCAGTGCAAAACCAGATACAAGA 425
Query 411 GGCTCAAAGGTAGTGCTGCTATTCCTGGTGATAAAGACGAGGATGGCTTAGCTGATGAAG 470
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 426 GGCTCAAAGGTAGTCCTGCTATTCCTGGTGATAAAGACGAGGATGGCTTAGCTGATGAAG 485
Query 471 GTACTGTTGAGTTCAACTACCCGCAGAAGGA-AAAGATTTCAGAGCGGATGCTTGGATGG 529
|||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||
Sbjct 486 GTACTGTTGAGTTCAACTACCCTCAGAAGGAGAAA-ATTTCAGAGCGGATGCTTGGTTGG 544
Query 530 CATCTTACTCGTGGGAAAGGAGAGGAAATGGGGGAACCCCAGTATGATAAAGAGGTCTCT 589
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 545 CATCTTACTCGTGGGAAGGGAGAGGAAATGGGGGAACCCCAGTATGATAAAGAGGTCTCT 604
Query 590 CACAATCATCTTCCTCGTCTCACGAGCAGACAAGATACTTCTGGAGAGTTTTCTGCTGCC 649
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 605 CACAATCATCTTCCTCGTCTCACGAGCAGACAAGATACTTCAGGAGAGTTTTCTGCTGCC 664
Query 650 TCACCTGAACGCCTCTCTGTATCTTCTACTATTGCTGGTGGAAAGCGCCTTCCCTATTCA 709
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 665 TCACCTGAACGCCTCTCTGTATCTTCTACTATCGCTGGGGGAAAGCGCCTTCCCTATTCA 724
Query 710 TCAGATGTCAATCAATCACCAAATAGAAGGATTGTGGATCCTGTTGGATTAGGGAATGTA 769
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 725 TCAGATGTCAATCAATCACCAAATAGAAGGATTGTGGATCCTGTTGGACTCGGGAATGTA 784
Query 770 GCTTGGAAGGAGAGAGTCGATGGCTGGAAAATGAAGCAAGAGAAGAATACTGGTCCTGTG 829
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 785 GCTTGGAAGGAGAGAGTTGATGGCTGGAAAATGAAGCAAGAGAAGAATACTGGTCCTGTC 844
Query 830 AGCACGCAGGCTGCTTCTGAAAGAGGTGGAGGAGATATTGATGCCAGCACAGATATCCTC 889
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 845 AGCACGCAGGCTGCTTCTGAAAGAGGTGGAGTAGATATTGATGCCAGCACAGATATCCTA 904
Query 890 GCAGATGAGGCTTTGCTGAATGATGAAGCGAGGCAGCCTCTGTCAAGGAAAGTTTCGATT 949
|||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 905 GCAGATGAGGCTCTGCTGAATGACGAAGCGAGGCAGCCTCTGTCAAGGAAAGTTTCAATT 964
Query 950 CCTTCATCACGGATCAATCCTTACAGAATGGTTATTATGTTGCGACTTGTTATCCTTTGT 1009
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 965 CCTTCATCACGGATCAATCCTTACAGAATGGTTATTATGCTGCGGCTTGTTATCCTTTGT 1024
Query 1010 CTCTTCTTGCATTACCGTATAACAAATCCAGTGCCAAATGCCTTTGCTCTTTGGCTGGTC 1069
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 1025 CTCTTCTTGCATTACCGTATAACAAACCCAGTGCCAAATGCCTTTGCTCTATGGCTGGTC 1084
Query 1070 TCTGTGATATGTGAGATTTGGTTTGCCCTATCCTGGATTTTGGATCAGTTTCCCAAGTGG 1129
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1085 TCTGTGATATGTGAGATCTGGTTTGCCTTATCCTGGATTTTGGATCAGTTTCCCAAGTGG 1144
Query 1130 TTTCCTGTGAACCGCGAAACCTACCTCGACAGGCTTGCGTTAAGATATGATCGTGAAGGT 1189
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1145 TTTCCTGTGAACCGTGAAACCTACCTCGACAGGCTTGCTTTAAGATATGATCGTGAAGGT 1204
Query 1190 GAGCCGTCTCAGTTAGCCGCAGTTGACATTTTTGTGAGTACTGTCGACCCCTTGAAGGAG 1249
||||| || |||||||| || ||||||||||| ||||||||||| |||||||||||||||
Sbjct 1205 GAGCCATCACAGTTAGCTGCTGTTGACATTTTCGTGAGTACTGTTGACCCCTTGAAGGAG 1264
Query 1250 CCACCCCTTGTGACAGCCAACACAGTTCTCTCCATTCTGGCTGTTGACTACCCGGTTGAC 1309
|||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct 1265 CCACCCCTTGTGACAGCCAACACAGTGCTCTCTATTCTGGCTGTTGACTACCCAGTTGAC 1324
Query 1310 AAGGTGTCCTGTTATGTTTCTGATGATGGTGCTGCTATGTTATCATTTGAAGCACTTGCA 1369
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1325 AAGGTGTCCTGTTATGTTTCTGATGATGGTGCTGCTATGTTATCATTTGAATCACTTGCA 1384
Query 1370 GAAACATCAGAGTTTGCTCGGAAATGGGTACCATTCTGCAAGAAATATTGCATTGAGCCT 1429
|||||||||||||||||||| |||||||||||||| |||||||||||| |||| ||||||
Sbjct 1385 GAAACATCAGAGTTTGCTCGTAAATGGGTACCATTTTGCAAGAAATATAGCATAGAGCCT 1444
Query 1430 CGTGCACCAGAATGGTACTTTGCTGCGAAAATAGATTACTTGAAGGATAAAGTTCAGACA 1489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1445 CGTGCACCAGAATGGTACTTTGCTGCGAAAATAGATTACTTGAAGGATAAAGTTCAGACA 1504
Query 1490 TCATTTGTCAAAGATCGTAGAGCTATGAAGAGGGAATATGAGGAATTTAAAATCCGAATC 1549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1505 TCATTTGTCAAAGATCGTAGAGCTATGAAGAGGGAATATGAGGAATTTAAAATCCGAATC 1564
Query 1550 AATGCACTTGTTTCCAAGGCCCTAAAATGTCCTGAAGAAGGGTGGGTTATGCAAGATGGT 1609
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1565 AATGCACTTGTTTCCAAAGCCCTAAAATGTCCTGAAGAAGGGTGGGTTATGCAAGATGGC 1624
Query 1610 ACACCGTGGCCTGGAAATAATACAAGGGACCATCCAGGAATGATCCAGGTATTCTTAGGG 1669
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1625 ACACCGTGGCCTGGAAATAATACAAGGGACCATCCAGGAATGATCCAGGTCTTCTTAGGG 1684
Query 1670 CAAAATGGTGGACTTGATGCAGAGGGCAACGAGCTTCCGCGTTTGGTGTATGTTTCTCGA 1729
||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct 1685 CAAAATGGTGGACTTGATGCAGAGGGCAATGAGCTCCCGCGTTTGGTATATGTTTCTCGA 1744
Query 1730 GAAAAGCGACCAGGATTCCAGCACCACAAAAAGGCTGGTGCTATGAATGCACTTGTTAGA 1789
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 1745 GAAAAGCGACCAGGATTCCAGCACCACAAAAAGGCTGGTGCTATGAATGCACTGGTGAGA 1804
Query 1790 GTTTCAGCAGTCCTTACCAATGGACCTTTCATCTTGAATCTCGATTGTGATCATTACATA 1849
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1805 GTTTCAGCAGTTCTTACCAATGGACCTTTCATCTTGAATCTTGATTGTGATCATTACATA 1864
Query 1850 AATAACAGCAAAGCTTTAAGAGAAGCAATGTGTTTCCTGATGGACCCGAACCTCGGGAAG 1909
|||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1865 AATAACAGCAAAGCCTTAAGAGAAGCAATGTGCTTCCTGATGGACCCAAACCTCGGGAAG 1924
Query 1910 CAAGTTTGCTATGTTCAGTTCCCACAAAGATTCGATGGTATTGATAAGAACGATAGATAT 1969
|||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1925 CAAGTTTGTTATGTTCAGTTCCCACAAAGATTTGATGGTATCGATAAGAACGATAGATAT 1984
Query 1970 GCTAATCGTAATACTGTGTTCTTTGATATTAACTTGAGAGGTTTAGATGGGATTCAAGGA 2029
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1985 GCTAATCGTAATACCGTGTTCTTTGATATTAACTTGAGAGGTTTAGATGGGATTCAAGGA 2044
Query 2030 CCTGTATATGTGGGAACTGGGTGTGTTTTCAACAGAACAGCATTATATGGTTATGAACCT 2089
||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 2045 CCTGTATATGTCGGAACTGGATGTGTTTTCAACAGAACAGCATTATACGGTTATGAACCT 2104
Query 2090 CCAATAAAGGTAAAACACAAGAAGCCAAGTCTTTTATCTAAGCTCTGTGGTGGATCAAGA 2149
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2105 CCAATAAAAGTAAAACACAAGAAGCCAAGTCTTTTATCTAAGCTCTGTGGTGGATCAAGA 2164
Query 2150 AAGAAGAATTCCAAAGCTAAGAAAGAATCGGACAAAAAGAAATCAGGCAGGCATACTGAC 2209
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2165 AAGAAGAATTCCAAAGCTAAGAAAGAGTCGGACAAAAAGAAATCAGGCAGGCATACTGAC 2224
Query 2210 TCAACTGTTCCTGTGTTCAACCTCGATGACATAGAAGAGGGAGTTGAAGGTGCTGGTTTT 2269
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2225 TCAACTGTTCCTGTATTCAACCTCGATGACATAGAAGAGGGAGTTGAAGGTGCTGGTTTT 2284
Query 2270 GACGATGAAAAGGCGCTCTTGATGTCGCAAATGAGCCTGGAGAAGCGATTTGGACAGTCT 2329
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2285 GATGATGAAAAGGCGCTCTTAATGTCGCAAATGAGCCTGGAGAAGCGATTTGGACAGTCT 2344
Query 2330 GCTGTTTTTGTTGCTTCTACCCTGATGGAAAATGGGGGTGTTCCTCCTTCAGCAACTCCA 2389
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 2345 GCTGTTTTTGTTGCTTCTACCCTAATGGAAAATGGTGGTGTTCCTCCTTCAGCAACTCCA 2404
Query 2390 GAAAACCTTCTCAAAGAGGCTATCCATGTCATTAGTTGTGGTTACGAGGATAAGTCAGAT 2449
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2405 GAAAACCTTCTCAAAGAGGCTATCCATGTCATTAGTTGTGGTTATGAGGATAAGTCAGAT 2464
Query 2450 TGGGGAATGGAGATTGGATGGATCTATGGTTCTGTGACAGAAGATATTCTGACTGGGTTC 2509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2465 TGGGGAATGGAGATTGGATGGATCTATGGTTCTGTGACAGAAGATATTCTGACTGGGTTC 2524
Query 2510 AAAATGCATGCCCGTGGATGGCGTTCCATTTACTGTATGCCAAAGCTTCCAGCTTTCAAG 2569
||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct 2525 AAAATGCATGCCCGTGGATGGCGATCCATTTACTGCATGCCTAAGCTTCCAGCTTTCAAG 2584
Query 2570 GGGTCTGCTCCTATCAATCTTTCAGATCGTCTGAACCAAGTGCTGAGGTGGGCTCTAGGT 2629
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2585 GGTTCTGCTCCTATCAATCTTTCAGATCGTCTGAACCAAGTGCTGAGGTGGGCTTTAGGT 2644
Query 2630 TCAGTTGAGATTCTCTTCAGTCGGCATTGTCCTATATGGTATGGTTACAATGGGAGGCTG 2689
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2645 TCAGTTGAGATTCTCTTCAGTCGGCATTGTCCTATATGGTATGGTTACAATGGGAGGCTA 2704
Query 2690 AAATTTCTTGAGAGGTTTGCATATGTGAACACCACCATCTACCCAATCACCTCCATCCCT 2749
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||
Sbjct 2705 AAATTTCTTGAGAGGTTTGCGTATGTGAACACCACCATCTACCCTATCACCTCCATTCCT 2764
Query 2750 CTTCTCATGTATTGTACATTGCCCGCCGTTTGTCTCTTCACCAACCAGTTTATTATTCCT 2809
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2765 CTTCTCATGTATTGTACATTGCCAGCCGTTTGTCTCTTCACCAACCAGTTTATTATTCCT 2824
Query 2810 CAGATTAGTAACATTGCAAGTATATGGTTTCTGTCTCTCTTTCTCTCCATTTTCGCCACG 2869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2825 CAGATTAGTAACATTGCAAGTATATGGTTTCTGTCTCTCTTTCTCTCCATTTTCGCCACG 2884
Query 2870 GGTATACTAGAAATGAGGTGGAGTGGCGTAGGCATAGACGAATGGTGGAGAAACGAGCAG 2929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2885 GGTATACTAGAAATGAGGTGGAGTGGCGTAGGCATAGACGAATGGTGGAGAAACGAGCAG 2944
Query 2930 TTTTGGGTCATTGGTGGAGTATCCGCTCACTTATTCGCCGTGTTTCAAGGTATCCTCAAA 2989
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 2945 TTTTGGGTCATTGGTGGAGTATCCGCTCATTTATTCGCTGTGTTTCAAGGTATCCTCAAA 3004
Query 2990 GTCCTTGCTGGTATTGACACGAACTTCACAGTCACCTCAAAAGCTTCAGACGAAGACGGA 3049
|||||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct 3005 GTCCTTGCCGGTATTGACACAAACTTCACAGTTACCTCAAAAGCTTCAGATGAAGACGGA 3064
Query 3050 GACTTTGCCGAGCTCTACTTGTTCAAATGGACAACACTTCTGATTCCGCCAACGACGCTG 3109
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3065 GACTTTGCTGAGCTCTACTTGTTCAAATGGACAACACTTCTGATTCCGCCAACGACGCTG 3124
Query 3110 CTCATTGTAAACCTAGTGGGAGTTGTTGCAGGAGTCTCTTATGCTATCAACAGTGGGTAC 3169
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3125 CTCATTGTAAACTTAGTGGGAGTTGTTGCAGGAGTCTCTTATGCTATCAACAGTGGATAC 3184
Query 3170 CAATCATGGGGACCACTCTTTGGTAAGTTGTTCTTTGCGTTTTGGGTGATTGTTCACTTG 3229
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 3185 CAATCATGGGGACCACTCTTTGGTAAGTTGTTCTTTGCCTTCTGGGTGATTGTTCACTTG 3244
Query 3230 TACCCTTTCCTTAAGGGTTTGATGGGTCGACAGAACCGGACTCCTACCATTGTTGTGGTC 3289
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3245 TACCCTTTCCTCAAGGGTTTGATGGGTCGACAGAACCGGACTCCTACCATTGTTGTGGTC 3304
Query 3290 TGGTCTGTTCTCTTGGCTTCCATCTTCTCGTTGTTGTGGGTTAGGATTGATCCCTTCACT 3349
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 3305 TGGTCTGTTCTCTTGGCTTCTATCTTCTCGTTGTTGTGGGTTAGGATTGATCCCTTCACT 3364
Query 3350 AGCCGAGTCACTGGCCCGGACATTCTGGAATGTGGAATCAACTGTTGAGAAGTGGGCAAA 3409
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 3365 AGCCGAGTCACTGGCCCGGACATTCTGGAATGTGGAATCAACTGTTGAGAAGCGAGCAAA 3424
Query 3410 TATTTACCTGTTTTGAGGGTTaaaaaaa--------ttt---t-------cattgtttta 3451
|||||||||||||||||||||||||||| ||| | ||||||||||
Sbjct 3425 TATTTACCTGTTTTGAGGGTTAAAAAAAACACAGAATTTAAATTATTTTTCATTGTTTTA 3484
Query 3452 tttgttcacttttttacttttgttgtgtgtaat-tgtCTGTTCGTTCTTCTGTCTTGGTG 3510
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 3485 TTTGTTCACTTTTTTACTTTTGTTGTGTGTA-TCTGTCTGTTCGTTCTTCTGTCTTGGTG 3543
Query 3511 TCATAAATTTATGTGTAGAATAT--CTTACTCTAGTTACTTTGAAAAGTTATAATTAAAG 3568
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct 3544 TCATAAATTTATGTGTAGAATATATCTTACTCTAGTTACTTTGGAAAGTTATAATTAAAG 3603
Query 3569 TGAAAGCGAATATTTTTT 3586
||||||||||||||||||
Sbjct 3604 TGAAAGCGAATATTTTTT 3621
> AT5G09870.1 | Symbols: CESA5 | cellulose synthase 5 | chr5:3073356-3078262
FORWARD LENGTH=3498
Length=3498
Score = 538 bits (291), Expect = 1e-151
Identities = 923/1219 (76%), Gaps = 80/1219 (7%)
Strand=Plus/Plus
Query 920 AGGCAGCCTCTGTCAAGGAAAGTTTCGATTCCTTC-ATCACGGATCAATCCTTACAGAAT 978
||||||||| |||| |||||||| |||| || | || || ||||| ||||| ||
Sbjct 736 AGGCAGCCTTTGTCTAGGAAAGTACCGATAAAGTCGAGCA-AAATAAATCCGTACAGGAT 794
Query 979 GGTTATTATGT-TGCGACTTGTTATCCTTTGTCTCTTCTTGCATTACCGTATAAC-AAAT 1036
| | ||| | | |||| ||||| || || ||||||| || ||||||||||| | |
Sbjct 795 GCTAATTGT-TCTGCGTCTTGTGATTCTCGGTCTCTTTTTCCATTACCGTAT-TCTTCAC 852
Query 1037 CCAGTGCCAA--ATGCCTT-TGCTCTT-TGGCTGGTCTCTGTGATATGTGAGATTTGGTT 1092
|| || ||| ||| ||| || ||| ||||| | ||||||||||| || || |||||
Sbjct 853 CCCGT--CAATGATG-CTTACGC-CTTGTGGCTAATATCTGTGATATGCGAAATATGGTT 908
Query 1093 TGCCCTATCCTGGATT-TTGGATCAGTTTCCC-AAGTGGTTTCCTGT-GAACCGCGAAAC 1149
||| | || ||| || || |||||| ||||| || |||| |||| | ||| | || ||
Sbjct 909 TGCGGTTTCATGGGTTCTT-GATCAG-TTCCCTAAATGGTATCCTATAGAA-AGAGAGAC 965
Query 1150 CTACCTCGACAGGCT-TGCGTTAAGATATGATCGTGAAGGTG-AGCCGTCTCAGTTAGCC 1207
||| | |||||||| | | || || || || ||||| | | || ||| | ||||
Sbjct 966 ATACTTGGACAGGCTCT-CATTGAGGTACGAAAAAGAAGG-GAAACCATCTGAACTAGCT 1023
Query 1208 GCAGTTGACATTTTTGTGAGTACTGTCGACCCCTTGAAGGAGCCACCCCTTGTGACAGCC 1267
| ||||| ||||||||||||| || || || |||| ||||| || ||| | |||||
Sbjct 1024 GGTGTTGATGTTTTTGTGAGTACAGTGGATCCGATGAAAGAGCCTCCGCTTATTACAGCA 1083
Query 1268 AACACAGTTCTCTCCATTCTGGCTGTTGACTACCCGGTTGACA-AGGTGTCCTGTTATGT 1326
||||| ||||| || ||||| || ||||| || ||||| |||| || || ||||||||||
Sbjct 1084 AACACTGTTCTGTCTATTCTTGCGGTTGATTATCCGGTAGACAGAGTTG-CCTGTTATGT 1142
Query 1327 TTCTGATGATGGTGCTGCTATG-TTATCATTTGAAGCACTTGCAGAAACATCAGAGTTTG 1385
|||||||||||||||||||||| ||| | |||||||| ||| |||||||| |||||||||
Sbjct 1143 TTCTGATGATGGTGCTGCTATGCTTA-CTTTTGAAGCCCTTTCAGAAACAGCAGAGTTTG 1201
Query 1386 CTCGGAAATGGGTACCATTCTGCAAGAAATATTGC-ATTGAGCCTCGTGCACCAGAATGG 1444
|| |||||||||| || ||||| |||||||| | || ||||| || || || ||||||
Sbjct 1202 CTAGGAAATGGGTTCCTTTCTGTAAGAAATACA-CTATCGAGCCACGAGCTCCCGAATGG 1260
Query 1445 TACTTTGCTGCGA-AA-ATAGATTACTTGAAGGATAAAGTTCAGACAT-CATTTGTCAAA 1501
|| ||| ||| | || || ||||| || ||| |||||||||| | | ||||||| |
Sbjct 1261 TATTTT--TGCCACAAGATGGATTATTTAAAGAATAAAGTTCACCC-TGCATTTGTTAGG 1317
Query 1502 GATCGTAGAGCTATGAAGAGGGAATATGAGGAATTTAAAATCC-GAATCAATGCACTT-G 1559
|| || |||| |||||||| || ||||| ||||| || | || ||||||| || |
Sbjct 1318 GAACGCCGAGCCATGAAGAGAGATTATGAAGAATTCAAGGTTAAGA-TCAATGCT-TTAG 1375
Query 1560 TTTCCAAGGCCCTA-AAA-TGTCCTGAAGAAGGGTGGGTTATGCAAGATGGTACACCGTG 1617
|| | | || | | ||| || ||||||||||| ||| ||||||||| ||||| || ||
Sbjct 1376 TTGCGACTGCAC-AGAAAGTG-CCTGAAGAAGGTTGGACTATGCAAGACGGTACTCCTTG 1433
Query 1618 GCCTGGAAATAA--TACAAGGGACCATCCAGGAATGATCCAGGTATTC-TTAGGGCAA-A 1673
||| || ||||| | | || | || || || ||||||||||||||| || || || |
Sbjct 1434 GCCCGGTAATAACGTGCGAG--ATCACCCTGGCATGATCCAGGTATTCCTT-GGA-AATA 1489
Query 1674 ATGGTGGACTTGATGCAGAGGGCAACGAGCTT-CCGCGTTTGGTGTATGTTTCTCGAGAA 1732
| |||| | |||| ||| ||||||| || || || |||| ||||||||||| ||
Sbjct 1490 ACGGTGTCCGCGATGTAGAAAACAACGAG-TTGCCTCGGCTGGTTTATGTTTCTCGTGAG 1548
Query 1733 AAGCGACCAGGATTCCAGCACCACAAAAAGGCTGGTGCTATGAA-TGCACTTGTTA-GAG 1790
||| |||| ||||| | || ||||| |||||||| || ||||| | | || | || |||
Sbjct 1549 AAGAGACCCGGATTTGACCATCACAAGAAGGCTGGAGCCATGAACTCC-CT-GATACGAG 1606
Query 1791 TTTCAGCAGTCCTTACCAA-TGGACCTT-TCATCTTGAATCTCGATTGTGATCATTACAT 1848
| || | ||| || | ||| || |||| || ||| ||| ||||||||||||| |||||
Sbjct 1607 TCTCTGGAGTTCT-ATCAAATGCTCCTTATCTTCTA-AATGTCGATTGTGATCACTACAT 1664
Query 1849 AAATAACAGCAAAGCT-TTAAGAGAAGCAATGTGTTTCCTGATGGACCCGAACCTCGGGA 1907
||||| ||||||||| ||| ||||||||||||||||| ||||||| || | ||||||
Sbjct 1665 CAATAATAGCAAAGCTCTTA-GAGAAGCAATGTGTTTCATGATGGATCCTCAG-TCGGGA 1722
Query 1908 A-GCAAGTTTGCTATGTTCAGTTCCCACAAAGATTCGATGGTATTGATAAGAAC-GATAG 1965
| | || |||| |||||||| ||||| |||||||||||||| |||||||| || || ||
Sbjct 1723 AAGAAAATTTGTTATGTTCAATTCCCTCAAAGATTCGATGGGATTGATAA-AAGTGACAG 1781
Query 1966 ATA-TGCTAATCGTAATACTGTGTTCTTTGATATTAACT-TGAGAGGTTTAGATGGGATT 2023
||| | ||||||||||| ||| ||||| |||||||| | ||| |||||| ||||| |||
Sbjct 1782 ATACT-CTAATCGTAATGTTGTATTCTTCGATATTAA-TATGAAAGGTTTGGATGG-ATT 1838
Query 2024 -CAAGGACCTGTATATGTGGGAACTGGGTGTGTTTTCAACAGAACA-GCA-TTATATGG- 2079
||||| ||| |||| |||||||| ||||||||||| | ||| || ||| || |||||
Sbjct 1839 ACAAGGGCCTATATACGTGGGAACCGGGTGTGTTTTTAGGAGA-CAAGCACTT-TATGGA 1896
Query 2080 TTATGAACCTCCAATAAAG 2098
|| ||| | |||| ||||
Sbjct 1897 TT-TGATGCGCCAAAAAAG 1914
> AT2G21770.1 | Symbols: CESA9, CESA09 | cellulose synthase A9
| chr2:9284837-9289536 FORWARD LENGTH=3308
Length=3308
Score = 267 bits (144), Expect = 7e-70
Identities = 679/929 (73%), Gaps = 69/929 (7%)
Strand=Plus/Plus
Query 2420 ATTAGTTGTGGTTACGAGGATAAGTCAGATTGGGGAATGGAGATTGGATGGATCTATGGT 2479
||||| ||||| ||||| || || | || ||||||| |||||||| ||||| |||||
Sbjct 2290 ATTAGCTGTGGCTACGAAGAGAAAACCGAATGGGGAAAAGAGATTGGGTGGATTTATGGC 2349
Query 2480 TCTGTGACAGAAGATATTC-TGACTGGG-TTCAAAATGCA-TGCCCGTGGATGGCGTTCC 2536
|| || || || |||| || | || ||| ||||| ||||| || || ||||||| | ||
Sbjct 2350 TCGGTCACTGAGGATA-TCTTAAC-GGGTTTCAAGATGCATTG-CCATGGATGGAGATCT 2406
Query 2537 ATTTACTGTATGCCAAAGCTTCCAGCTTTCAAGGGGTCTGCTCCTATCAATCTT-TCAGA 2595
| || ||||||||||||| | |||||||| || |||||||| || || ||| || ||
Sbjct 2407 GTATATTGTATGCCAAAGCGAGCGGCTTTCAAAGGTTCTGCTCCCATTAA-CTTGTCGGA 2465
Query 2596 TCGTCTGAACCAAGTGCTGA-GGTGGGCTCTAGGTTCAGTTGAGATTCTCTTCAGTCGGC 2654
|||||| | ||||| || | | ||||| || || || || |||||| |||| ||| |||
Sbjct 2466 TCGTCTTCATCAAGTTCT-ACGTTGGGCACTTGGCTCTGTCGAGATTTTCTTGAGTAGGC 2524
Query 2655 ATTGTCCTATATGGTATGGTTACAATGGGAGGCTGAAATTTCTT-GAGAGGTT-TGCATA 2712
|||| ||||| ||||| ||||| | || || | ||| | || || || || | | ||
Sbjct 2525 ATTGCCCTATTTGGTACGGTTATGGT-GGTGGTTTAAAATGGTTGGAAAGATTCT-CTTA 2582
Query 2713 TGTGAACACCACCATCTACCCAAT-CACCTCCATCCCTCTT-CTCATGTATTG-TACA-T 2768
| ||| | |||| || | || ||| | ||| || || | || || | || |
Sbjct 2583 CATTAACTCTGTTGTCTATCC-TTGGACATCCCTTCCT-TTGCTTGTCTACTGCT-CACT 2639
Query 2769 TGCCCGCCGTTTGTCT-CTTCACC--AACCAGTTTATTATTCCTCAGATTAGTAACAT-T 2824
| |||||| ||||||| | ||||| || | || || | ||| |||| |||||| |
Sbjct 2640 T-CCCGCCATTTGTCTAC-TCACCGGAA--AATTCATCGTCCCTGAGATAAGTAAC-TAC 2694
Query 2825 GCAAGTATA-TGGTTTCTGTCT-CTCTTTCTCTCCATTTTC-GCCACGGGTATACTAGAA 2881
|| ||||| | || ||| || | ||| | |||| || | | |||||||||||||||
Sbjct 2695 GCGGGTATACT-CTTCCTG-CTAATGTTTATGTCCA-TTGCGGTAACGGGTATACTAGAA 2751
Query 2882 ATG-AGGTGGAGTGGCGTAGGCATAGACGAATGGTGGAGAAACGAGCAGTTTTGGGTCAT 2940
||| | ||| | |||| || || || |||||||||||||||||||||||||||||
Sbjct 2752 ATGCA-ATGGGGCAAAATAGGAATCGATGATTGGTGGAGAAACGAGCAGTTTTGGGTCAT 2810
Query 2941 TGGTGGAGTATCCGCTCA-CTTATTCGC-CGTGTTTCAAGGTATCCTCAAAGTCCTTGCT 2998
||| ||||| || | || || ||| || | ||||||||||| | |||||||| |||||
Sbjct 2811 TGGAGGAGTCTCTTCGCATCT-ATTTGCTC-TGTTTCAAGGTTTACTCAAAGTTCTTGCA 2868
Query 2999 GGTATTGA-CACGAACTTCACAGTCACCTCAAAAGCTTCAGACGAAGACGGAGACTT-TG 3056
|| | | | |||||||||||||||||| || ||||| |||| || | | ||| || |
Sbjct 2869 GG-AGTCAGCACGAACTTCACAGTCACATCTAAAGCAGCAGATGATG--G-AGAATTCT- 2923
Query 3057 CCGAGCTCTAC-TTGTTCAAATGGACAACACTTCT-GATTCCGCCAACGACGCTGCTCAT 3114
| ||||| ||| || |||||||||||| | || | |||||| || || || ||||| ||
Sbjct 2924 CAGAGCTTTACATT-TTCAAATGGACATCT-TTGTTGATTCCTCCGACTACTCTGCTGAT 2981
Query 3115 TGTAAACCTAGTGGGAGTTGTTG-CAGGAGTCTCTTATGCTATCAACAGTGGGTACCAAT 3173
| ||| | || ||||| ||| | ||||| || |||| || || | ||||| | |
Sbjct 2982 CATTAACATCGTTGGAGTCATTGTC-GGAGTTTCGGATGCGATAAATAACGGGTATGACT 3040
Query 3174 CATGGGGACCACTCTTTGGTA-AGTTGTTCTTTGCGTTTTGGGTGATTGTTCACTTGTAC 3232
| |||||||| || ||||| | | |||||||||||| |||||||||||||||| |||||
Sbjct 3041 CTTGGGGACCGCTTTTTGGGAGA-TTGTTCTTTGCGCTTTGGGTGATTGTTCATTTGTAT 3099
Query 3233 CCTTTCCTTAA-GGGTTTGATGGGTCGACA-GA-ACCGGACTCCTACCATTGT-TGTGGT 3288
|| ||||| || ||||| |||| ||| || | | || | |||||| | | ||||
Sbjct 3100 CCGTTCCTCAAAGGGTTACTTGGGAA-ACAAGATAGAGTAC-CA-ACCATTATAT-TGGT 3155
Query 3289 CTGGTCTG-TTCT-CTTGGCTTCCATCTT 3315
||||| | |||| |||| ||||||||||
Sbjct 3156 TTGGTC-GATTCTTCTTG-CTTCCATCTT 3182
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 178544150137
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5