BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487338
Length=2223
Score E
Sequences producing significant alignments: (Bits) Value
AT5G05460.1 | Symbols: | Glycosyl hydrolase family 85 | chr5:... 3384 0.0
AT3G11040.1 | Symbols: | Glycosyl hydrolase family 85 | chr3:... 1020 0.0
AT3G61010.2 | Symbols: | Ferritin/ribonucleotide reductase-lik... 196 6e-49
> AT5G05460.1 | Symbols: | Glycosyl hydrolase family 85 | chr5:1615529-1618902
FORWARD LENGTH=2260
Length=2260
Score = 3384 bits (1832), Expect = 0.0
Identities = 2073/2187 (95%), Gaps = 25/2187 (1%)
Strand=Plus/Plus
Query 1 TATCATCGTCTTCTTCGTCTTTTGCCGTTGACTTGTTTGAATTTTCGCAAATCCCTCTCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 11 TATCATCGTCTTCTTCGTCTTTTGCCGTTGACTTGTTTGAATTTTCGCAAA----TC-C- 64
Query 61 ATCTCGTGATGTCCAACGACGAAGCCATGTTAGTGGcaccacca---cc-a--ccaccac 114
|||| | | |||||||| |||| ||||| ||||||||||||| || | || ||||
Sbjct 65 GTCTC-T-A--TCCAACGAAGAAGTCATGTCAGTGGCACCACCAGCTCCAAGTCCTCCAC 120
Query 115 cTTTCGATCCTACTAAGCCATCAACACCTATCTCCTTCCCTATCAAAACTCTTCAAGACT 174
|||||||||| ||||||||||| ||||| ||||| ||||| |||||||||||||||||||
Sbjct 121 CTTTCGATCCGACTAAGCCATCGACACCAATCTCTTTCCCAATCAAAACTCTTCAAGACT 180
Query 175 TGAAGTCTCGCTCTTACTTCGATTCCTTTCATTATCCCTTTAACCGCTCCTCCGTACCTC 234
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 181 TGAAGTCTCGCTCTTACTTCGATTCCTTTCATTATCCCTTTAACCGTTCCTCCGTACCTC 240
Query 235 TCCGTCGGAACATTGGCGCCTTGCCGGATCGATCTAGGCTCTTGGTTTGTCATGACATGA 294
||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||
Sbjct 241 TCCGTCGGAACATTGGCGCGTTGTCGGATCGACCTAGGCTCTTGGTTTGTCATGACATGA 300
Query 295 AAGGAGGTTACGTTGATGATAAGTGGGTACAAGGATGTGGAAACAACGCCGGTTACGCCA 354
||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 301 AAGGAGGCTACGTCGATGATAAGTGGGTACAAGGATGTGGAAACAACGCTGGTTACGCCA 360
Query 355 TCTGGGATTGGTATTTGATGGACGTTTTCGTTTACTTCTCACACTCGCTTGTGACTCTGC 414
|||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| |
Sbjct 361 TCTGGGATTGGTATTTGATGGACGTTTTCGTTTACTTCTCTCACTCTCTAGTGACTCTTC 420
Query 415 CTCCTCCTTGTTGGACCAACACTGCTCACAGACATGGCGTCAAGGTATTGGGGACTTTCA 474
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 421 CTCCTCCTTGTTGGACCAACACTGCTCACAGACATGGCGTCAAAGTATTGGGGACTTTCA 480
Query 475 TCACAGAATGGGACGAAGGAAAAGCTACCTGCAAAGAGTTGTTGGCGACAAAGGAGTCTG 534
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 481 TCACAGAATGGGACGAAGGAAAAGCTACCTGCAAAGAGTTGTTGGCCACAAAGGAATCTG 540
Query 535 CACAGATGTATGCAGAGCGTTTGGCTGAACTTGCTGCTGCTCTTGGCTTTGATGGGTGGC 594
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 541 CGCAGATGTATGCAGAGCGTTTGGCTGAACTTGCTGCTGCTCTTGGCTTTGATGGCTGGC 600
Query 595 TGATAAATATAGAGAATGTAATAGATGAAGTTCAAATTCCAAATTTGATGGTTTTTGTAA 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 TGATAAATATAGAGAATGTAATAGATGAAGTTCAAATTCCAAATTTGATGGTTTTTGTAA 660
Query 655 GCCATCTAACAAAAGTCATGCATTCATCTGTACCTGGAGGTTTAGTTATATGGTACGATA 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 661 GCCATCTAACAAAAGTCATGCATTCATCTGTACCTGGAGGTTTAGTTATATGGTATGATA 720
Query 715 GTGTCACGGTTGATGGTCAGCTTGCTTGGCAAGATCAGTTAACTGAGAAGAATAAACCTT 774
||||||| |||||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct 721 GTGTCACTATTGATGGTCATCTTGCTTGGCAAGATCAGTTAACCGAGAATAATAAACCTT 780
Query 775 TCTTTGATATATGCGATGGAATATTCATGAACTATACATGGAAGGAGAACTACCCCAAAG 834
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 781 TCTTTGATATATGCGATGGTATATTCATGAACTATACATGGAAGGAGAACTACCCCAAAG 840
Query 835 CATCAGCTGAAATTTCCGGTGATAGAAAGTATGATGTCTACATGGGAATAGATGTTTTTG 894
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 841 CATCAGCTGAAATTGCCGGTGATAGAAAATATGATGTCTACATGGGAATAGATGTGTTTG 900
Query 895 GTCGGGGAACTTATGGTGGTGGACAATGGACTGCAAATGTTGCCCTTGATTTGCTGAAGA 954
||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 901 GTCGGGGAACTTACGGTGGTGGGCAATGGACTGCAAATGTTGCTCTTGATTTGCTGAAGA 960
Query 955 GCAGTAATGTATCAGCTGCGATATTTGCTCCTGGATGGGTCTACGAAACCGAGCAACCAC 1014
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 961 GCAGTAATGTATCAGCTGCGATATTTGCTCCTGGATGGGTATACGAAACCGAGCAACCCC 1020
Query 1015 CGGATTTTTACACGGCACAAAATAAATGGTGGTCACTTGTTGAGAAGTCATGGGGTATAG 1074
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1021 CGGATTTTTACACGGCACAAAACAAATGGTGGTCACTTGTTGAGAAGTCATGGGGTATAG 1080
Query 1075 TTCAAAAATATCCTCAAGTCCTACCTTTCTACTCAGATTTTAATCAGGGCCTAGGTTCTC 1134
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1081 TTCAAACATATCCTCAAGTCCTACCTTTCTACTCAGATTTTAATCAGGGCCTTGGTTCTC 1140
Query 1135 ATATCTCTCTTGGAGGTCGGAAATTATCAGAAGCTCCCTGGTACAACATTTCATGCCAAA 1194
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1141 ATACCTCTCTTGGAGGTCGGAAATTATCAGAAGCTCCCTGGTACAACATCTCATGCCAAA 1200
Query 1195 GTCTGCAGCCACACCTAGAATTCAATGAAGGAAAGAATTCAGATATCATGCAAGTCACTG 1254
|||| |||||| |||||||||||||||||||| ||||||||| | ||| || |||||||
Sbjct 1201 GTCTACAGCCATTCCTAGAATTCAATGAAGGAAGGAATTCAGAGACCATTCAGGTCACTG 1260
Query 1255 TTGATGGTCGAGAAGCATCTTATAATGGAGGAGGGAACGTCAGTTTCAGAGGAAAACTAA 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 TTGATGGTCGAGAAGCATCTTATAATGGAGGAGGGAACGTCAGTTTCAGAGGAAAACTAA 1320
Query 1315 AGAGAAATGCACATTTCACAGCAAGACTCTTCAAACCTCAGCTTCAGTTCTCTGCTTCCC 1374
|||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||
Sbjct 1321 AGAGAAATGCACATTTCACAGCAAGACTATTCAAACCTCAGCTTCAGCTCTCTGCTGCCC 1380
Query 1375 CAATATCAATATCCTTTTCTGTGAAGTCAGATAAAAGATCCGAGCTAAGCATTCTGCTCC 1434
|||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 CAATCTCAATCTTCTTTTCTGTGAAGTCAGATAAAAGATCCGAGCTAAGCATTCTGCTCC 1440
Query 1435 ATTTTTCATCTCCTTCACATGAGACAAAGTCCTTGCTTATGGTGCCAAATGAATCCATCA 1494
||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| ||||
Sbjct 1441 ATTTTTCATCTCCTTCACAAGAGAAAAAGTCCATGCTTATGGTGCCAAATGAATCTATCA 1500
Query 1495 ACAGATTTGGTGACATGTTCCTACCATGTGTTCTCACATCAAAACAGACCACATCCGGTT 1554
|||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 1501 ACAGATTTGGCGACATGTTCCTGCCATGTCTTCTCACATCAAAACAGACCACATCCGGTT 1560
Query 1555 GGACGGTGCATGAAACAAACCTTGTTCTGGATGGGCACACACTGACTGAGATCTCTGCCT 1614
|||| || || ||||||||||||||| | ||||||||||||||||||||||| |||||||
Sbjct 1561 GGACAGTACACGAAACAAACCTTGTTTTAGATGGGCACACACTGACTGAGATATCTGCCT 1620
Query 1615 TCTGCTCCAGACCAGATGATCTCACAGAAGAAACAAACACACTAGAGTATTTTGCATTGC 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 TCTGCTCCAGACCAGATGATCTCACAGAAGAAACAAACACACTAGAGTATTTTGCATTGC 1680
Query 1675 TTGGACATATCTCCATCAAGAGCCAGCAAAAAACCAAGCTTTTTCCTCTGGCGTCATCAT 1734
|||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||
Sbjct 1681 TTGGACATATCTCCATCAAGAGCCAGCAAAAAGCCAAGGTTTATCCTCTGGCGTCATCAT 1740
Query 1735 GGGTTATCGAGGCTCATCACGTAAAGTTTGTACCGGGTGGTTCTGGCTCCAAGACCTTAA 1794
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1741 GGGTTATAGAGGCTCATCACGTAAAGTTTGTACCGGGTGATTCTGGCTCCAAGACCTTAA 1800
Query 1795 GTTGTAAGCTAGAATGGAGATTGAAGCACCCTGAAGAAGATTCTGTCTTTACAAAGTACA 1854
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1801 GTTGTAAGCTAGAATGGAGATTGAAGCACCCTGAAGAAGATTCTGTCTTTCCAAAGTACA 1860
Query 1855 ATGTGTATGCAGAGAATCTGAGTTCGAGTGATTATAGACCAAGGAAGGTTATGGAAGAAC 1914
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1861 ATGTATATGCAGAGAATCTGAGTTCGAGTGAGTATAGACCAAGGAAGGTTATGGAAGAAC 1920
Query 1915 CAAGAAGCGAGAAAGTGTTTCTTGGAACAGCTCATGTTGATGCTTATTATGTCTCTGATC 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1921 CAAGAAGCGAGAAAGTGTTTCTTGGAACAGCTCATGTTGATGCTTATTATGTCTCTGAAA 1980
Query 1975 TGGTCGTTGGATCAGATGTTAAGGGAGTCCGATTCGTGGTTCAAACCTGTGGTGAAGATG 2034
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1981 TGGTCGTTGGATCAGATGTGAAGGGAGTCCGGTTCGTGGTTCAAACCTGTGGTGAAGATG 2040
Query 2035 GTTCATGGCAGGAGTTGGATGCTTCCCCTAACCTTGTGGTTGAAGTAGAACGTCTGAGTT 2094
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 2041 GTTCATGGCAGGAGTTGGATGCTTCCCCTAACCTTGTGGTTGAAGTAGAGCGTGTGAGTT 2100
Query 2095 CAAAGCTTTGTTGTTGTGGGTTGATTTGAGTTATGGTTCATTTCCCAACTTGCAATTCCT 2154
||||||||||||||||||||||||||||| ||||||||||||||| | || |||
Sbjct 2101 CAAAGCTTTGTTGTTGTGGGTTGATTTGAATTATGGTTCATTTCC------G-AA--CCT 2151
Query 2155 GCGATCTAATAAGAGCATTGATGGTTT 2181
|||||||||||||| ||||||||||||
Sbjct 2152 GCGATCTAATAAGACCATTGATGGTTT 2178
> AT3G11040.1 | Symbols: | Glycosyl hydrolase family 85 | chr3:3460143-3463312
FORWARD LENGTH=2106
Length=2106
Score = 1020 bits (552), Expect = 0.0
Identities = 955/1147 (83%), Gaps = 37/1147 (3%)
Strand=Plus/Plus
Query 129 AAGCCATCAACACCTATCTCCTTCCCTATCAAAACTCTTCAAGACTTGAAGTCTCGCTCT 188
|||||||| |||||| || ||||| |||||| ||||||||||| |||| |||||||||
Sbjct 64 AAGCCATCGTTACCTATATCTTTCCCGATCAAAGCTCTTCAAGACCTGAAATCTCGCTCT 123
Query 189 TACTTCGATTCCTTTCATTATCC-CTTTAACCGCTCCTCCGTACCTCTCCGTCGGAACAT 247
||||| ||||||||||||| ||| ||||| |||||| | |||||| |||| || ||| |
Sbjct 124 TACTTTGATTCCTTTCATT-TCCAGTTTAATCGCTCCACAGTACCTTTCCGCCGAAAC-T 181
Query 248 -TGGC-GCCTTGCCGGATCGATCTAGGCTCTTGGTTTGTCATGACATGAAAGGAGGTTAC 305
| | | || ||| |||| | ||| | || || || ||||||||||||||||| ||
Sbjct 182 CCGACTG-TTTACCGAATCGCCCAAGGGTTTTAGTCTGCCATGACATGAAAGGAGGGTAT 240
Query 306 GTTGATGATAAGTGGGTACAAGGATGTGGAAAC-AACGCCGG-TTACGCCATCTGGGATT 363
|| ||||| |||||||||||||| |||| |||| || ||||| || || || ||| |||
Sbjct 241 GTAGATGACAAGTGGGTACAAGGGTGTGAAAACGAA-GCCGGATT-TGCGATTTGGCATT 298
Query 364 GGTATTTGATGGACGTTTTCGTTTACTTCTCACACTCGCTTGTGACTCTGCCTCCTCCTT 423
|||| ||||||||| |||| ||||||||||| || || || || ||| | ||||||||||
Sbjct 299 GGTACTTGATGGACATTTTTGTTTACTTCTCTCATTCTCTGGTCACTATTCCTCCTCCTT 358
Query 424 GTTGGACCAACACTGCTCACAGACATGGCGTCAAGGTATTGGGGACTTTCATCACAGAAT 483
| |||||||| |||||||| || |||||||| || |||||||||||||||||||||||||
Sbjct 359 GCTGGACCAATACTGCTCATAGGCATGGCGTTAAAGTATTGGGGACTTTCATCACAGAAT 418
Query 484 GGGACGAAGGAAAAGCTACCTGCAAAGAGTTG-TTGGCGACAAAGGAGTCTGCACAGATG 542
|||| |||||||||||||||||||||||| || || || |||||||||||||| || |||
Sbjct 419 GGGATGAAGGAAAAGCTACCTGCAAAGAGATGCTT-GCCACAAAGGAGTCTGCTCAAATG 477
Query 543 TATGCAGAGCGTTTGGCTGAACTTGCTGCTGCTCTTGGCTTTGATGGGTGGCTGATAAAT 602
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct 478 TATGCAGAGCGTTTGGCTGAACTTGCTACTGCTCTAGGCTTTGATGGGTGGCTGATAAAT 537
Query 603 ATAGAGAATG-TAATAGATGAAGTTCAAATTCCAAATTTGATGGTTTTTGTAAGCCATCT 661
|||||||||| || ||||||| | || ||||||||| ||| || || || ||||||||
Sbjct 538 ATAGAGAATGATA-TAGATGAGGAACAGATTCCAAATATGAAGGAATTCGTCAGCCATCT 596
Query 662 AACAAAAGTCATGCATTCATCTGT-ACCTGGAGG-TTTAGTTATATGGTACGATAGTGTC 719
|| ||||||| |||||| ||| | |||||| || |||||| |||||||| || ||||||
Sbjct 597 AAAAAAAGTCTTGCATTTATC-GACACCTGG-GGCTTTAGTCATATGGTATGACAGTGTC 654
Query 720 ACGGTT-GATGGTCAGCTTGCT-TGGCAAGATCAGTTAACTGAGAAGAATAAACCTTTCT 777
|| ||| | |||| | ||| | ||||||||||| || |||||| ||| ||||||||||
Sbjct 655 ACTGTTCG-TGGTAATCTT-CAGTGGCAAGATCAATTGACTGAGCTGAACAAACCTTTCT 712
Query 778 TTGA-TATATGCGATGGAATATTCATGAACTATACATGGAAGGAGAACTACCCCAAAGC- 835
|||| | ||||||||||||||||||||||||| ||||||||||||| |||||| ||| |
Sbjct 713 TTGACT-TATGCGATGGAATATTCATGAACTACACATGGAAGGAGAGCTACCC-AAACCT 770
Query 836 ATCAGCTGAAATTTCCGGTGATAGAAAGTAT-GATGTCTACATGGGAATAGATGTTTTTG 894
|||||||||| || | || || ||||| | | ||||||||||||||||| ||||||||||
Sbjct 771 ATCAGCTGAAGTTGCTGGGGACAGAAAAT-TCGATGTCTACATGGGAATTGATGTTTTTG 829
Query 895 GTCGGGGAACTTATGGTGGTGGACAATGGACTGCAAATGTTGCCCTTGATTTGCTGAAGA 954
| ||||| ||| ||||||||| |||||||||| ||||| ||| || |||||||||||||
Sbjct 830 GGCGGGGCTCTTTTGGTGGTGGGCAATGGACTGTAAATGCTGCTCTGGATTTGCTGAAGA 889
Query 955 GCAGTAATGTATCAGCTGCGATATTTGCTCCTGGATGGGTCTACGAAACCG-AGCAACCA 1013
| | ||||| |||||||| |||||||||||||||||||| || || || | | |||||
Sbjct 890 GAAACAATGTGTCAGCTGCCATATTTGCTCCTGGATGGGTTTATGAGACTGCA-CAACCC 948
Query 1014 CCGGATTTTTACACGGCACAAAATAAATGGTGGTCACTTGTTGAGAAGTCATGGGGTATA 1073
|| ||||| |||| || || |||||||||||||||||||| |||||||||||||| |||
Sbjct 949 CCCAATTTTCACACAGCTCAGAATAAATGGTGGTCACTTGTCGAGAAGTCATGGGGAATA 1008
Query 1074 GTTCAAAAATATCCTCAAGTCCTACCTTTCTACTCAGATTTTAATCAGGGCCTAGGTT-C 1132
|| |||| ||||| |||||| | ||||| ||||||||||| ||||||||| | |||| |
Sbjct 1009 GTCCAAACTTATCCACAAGTCTTGCCTTTTTACTCAGATTTCAATCAGGGCTTTGGTTAC 1068
Query 1133 TCATATCTCTCTTGGAGGTCGGAAATTATCAGAAGCTCCCTGGTACAACATTTCATGCCA 1192
||| | || || | |||||| || | ||||| |||| |||||||||||||| |||||
Sbjct 1069 -CATGTTTCACTCGAAGGTCGCCAACTGTCAGATTCTCCATGGTACAACATTTCTTGCCA 1127
Query 1193 AAGTCTGCAGCCACACCTAGAATTCAATGAAGGA-AAGAATTCAGATATCATGCAAGTCA 1251
|||||| ||||| | ||||||||||||||||| | || || ||||||||| || ||||
Sbjct 1128 AAGTCTTCAGCCTCTCCTAGAATTCAATGAAG-ACAACAA---AGATATCATCCAGGTCA 1183
Query 1252 CTGTTGA 1258
|||||||
Sbjct 1184 CTGTTGA 1190
> AT3G61010.2 | Symbols: | Ferritin/ribonucleotide reductase-like
family protein | chr3:22571327-22575180 REVERSE LENGTH=1925
Length=1925
Score = 196 bits (106), Expect = 6e-49
Identities = 133/146 (91%), Gaps = 2/146 (1%)
Strand=Plus/Plus
Query 456 AAGGTATTGGGGACTTTCATCACAGAATGGGACGAAGGAAAAGCTACCTGCAAAGAGTTG 515
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||
Sbjct 336 AAGGTATTGGGGACTTTCATCACAGAATGGGATGAAGTAAAAGCTACCTGCAAAGAGATG 395
Query 516 -TTGGCGACAAAGGAGTCTGCACAGATGTATGCAGAGCGTTTGGCTGAACTTGCTGCTGC 574
||| | |||| ||||||||| ||||||||||||| ||||||||| ||||||||| || |
Sbjct 396 CTTGCC-ACAAGGGAGTCTGCTCAGATGTATGCAGTGCGTTTGGCAGAACTTGCTACTTC 454
Query 575 TCTTGGCTTTGATGGGTGGCTGATAA 600
||| ||||||||||||||||||||||
Sbjct 455 TCTAGGCTTTGATGGGTGGCTGATAA 480
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 110290597365
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5