BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487359
Length=1139
Score E
Sequences producing significant alignments: (Bits) Value
AT5G05590.1 | Symbols: PAI2 | phosphoribosylanthranilate isomer... 1399 0.0
AT1G07780.3 | Symbols: PAI1, TRP6 | phosphoribosylanthranilate ... 1382 0.0
AT1G29410.2 | Symbols: PAI3 | phosphoribosylanthranilate isomer... 915 0.0
> AT5G05590.1 | Symbols: PAI2 | phosphoribosylanthranilate isomerase
2 | chr5:1666471-1668352 REVERSE LENGTH=1229
Length=1229
Score = 1399 bits (757), Expect = 0.0
Identities = 945/1033 (91%), Gaps = 24/1033 (2%)
Strand=Plus/Plus
Query 62 TTTTTGTTTTTCCGCCATTCTTGTCGATCTTCTTCAGCCGTACAACCG-C-CGTCTCTGC 119
||||| ||||||||||||||||||||||||||||||| |||| ||||| | |||||||||
Sbjct 6 TTTTTATTTTTCCGCCATTCTTGTCGATCTTCTTCAGTCGTAAAACCGCCGCGTCTCTGC 65
Query 120 TGA----TC-C-TC-C---TC-T----GGGAGAAAATTCGATATCATCTGCGA-TTCCGG 163
||| || | || | || | |||||||||| ||||| |||||| || ||||
Sbjct 66 TGACCCTTCTCTTCTCATTTCATCGACGGGAGAAAATCCGATACCATCTGAGATTTCCAA 125
Query 164 CAGTGGAATTAAGATGTCAACAGGAATATCCACAGATCTCCTCGCT-CATTCTAGAGCTT 222
||||| ||||||||||||||||||||||||||| ||||| | || | |||| | |||||
Sbjct 126 CAGTGAAATTAAGATGTCAACAGGAATATCCACTGATCTACACG-TCCATTTTGGAGCTC 184
Query 223 TGAATTTCTCCAGAACCTACAAATCTGGTTTAAGCTATCGAAAGGTGTCTGTCTCGAGAG 282
|||||||||| | |||||||||||||||||||||| |||||| ||||||| | |||||||
Sbjct 185 TGAATTTCTCAAAAACCTACAAATCTGGTTTAAGCAATCGAACGGTGTCTTTTTCGAGAG 244
Query 283 TCGGGTATGCTCAGAACAGGAAATTCAGCTGCAGTGTTTCCAGCACAGAGAATGTAGCTC 342
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 245 TCGGGTATGCTCAGAACAGGAAATTGAGCTGCAGTGTTTCCAACACAGAGAATGTAGCTC 304
Query 343 CTAAGGATGATGAAAGAGCAAAGGATAGACCTTTGGTTAAGATGTGTGGCATCACATCAG 402
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 305 CTAAGGATGATGAAAGAGGAAAGGATAGACCTTTGGTTAAGATGTGTGGCATCACATCAG 364
Query 403 CCAGAGATGCTGCTATGGCAGTTGAGGCTGGTGCTGATTTCATCGGGATGATTGTATGGC 462
|||||||||| ||||||||||||||||||||||| ||||| || ||||||||| | ||||
Sbjct 365 CCAGAGATGCAGCTATGGCAGTTGAGGCTGGTGCCGATTTTATTGGGATGATTATTTGGC 424
Query 463 CGA-ATTCAAAACGATCCATTTCTCTTTCTGTTGCAAAGGATATCTCCAAAGTGGCGAGG 521
| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 425 C-ACATTCAAAACGATCCATTTCTCTTTCTGTCGCAAAGGATATCTCCAAAGTGGCCAGG 483
Query 522 GATGGTGGGGTCAAATCTGTTGGTGTTTTTGTTGATGATGATGAGAACACGATATTGCGA 581
|| ||||||| |||| ||||||||||||||||||| |||||||| ||||||||| || ||
Sbjct 484 GAAGGTGGGGCCAAACCTGTTGGTGTTTTTGTTGAAGATGATGACAACACGATACTGAGA 543
Query 582 GCAGCTGATGCCTCAGACCTTGAGCTTGTGCAGCTTCATGGTAATGGTTCGCGTGCTGCT 641
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 544 GCAGCTGATTCCTCTGACCTTGAGCTTGTGCAGCTTCATGGTAATGGTTCGCGTGCTGCT 603
Query 642 TTCTCGAGGTTAGTACGCGAA-AGGAGAGTCATATATGTCCTTAATGCAAATGAGGATGG 700
|||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||
Sbjct 604 TTCTCGAGGTTAGTACGC-AAGAGGAGAGTCATATATGTCCTTAATGCAAATCAGGATGG 662
Query 701 AAAGCTCCTGAATGAAGTTCCTGAAGAGGATTGTCATCTCGCTGATTGGATTCTTGTGGA 760
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 663 AAAGCTCTTGAATGAAGTTCCTGAAGAGGATTGTCATCTTGCTGATTGGATTCTTGTGGA 722
Query 761 TAGTGCAACGGGTGGGAGTGGAAAAGGATTTAACTGGGCTCAATTCAAGTTACCTTCCAT 820
|||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| |
Sbjct 723 TAGTGCAACGGGTGGGAGTGGACACGGATTTAACTGGGCTCAATTCAAGTTGCCTTCCGT 782
Query 821 CAGAAGCAGAAATGGGTGGCTCTTAGCTGGCGGAATCAATCCGACAAACGTGTCAGAAGC 880
|||||||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||
Sbjct 783 CAGAAGCAGAAATGGGTGGCTCTTAGCTGGGGGAATCAATCCAACAAATGTTTCAGAAGC 842
Query 881 TCTTTCTATCCTTCAACCTGATGGAATTGATGTTAGCAGCGGTATCTGCGGTACAGACGG 940
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 843 TCTTTCTATCCTTCAACCTGATGGAATTGATGTTAGTAGCGGTATTTGCGGTACAGACGG 902
Query 941 CATCCAGAAGGATAAGGCTAAGATAAGTTCCTTCATAACTGCAGTTCGCTCTGTACACTA 1000
||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 903 TATCCAGAAGGATAAGTCTAAGATAAGCTCCTTTATAACTGCAGTTCGCTCTGTACACTA 962
Query 1001 CTAATGGCTAGCAATATAAGGCAAGGTAATTTTTCTTGTAACTATAGTTTCGAGCATCAA 1060
|||||||| |||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct 963 CTAATGGCAAGCAATATAAACCAAGGTAATTTATCTTGTAACTATAGTTTTGAGCATCAA 1022
Query 1061 CCTGTTGTGTCCA 1073
|||||||| ||||
Sbjct 1023 CCTGTTGTTTCCA 1035
Score = 56.5 bits (30), Expect = 5e-07
Identities = 30/30 (100%), Gaps = 0/30 (0%)
Strand=Plus/Plus
Query 1110 GGCTCTCAAGAACAAGATCCTTGTATGAAA 1139
||||||||||||||||||||||||||||||
Sbjct 1153 GGCTCTCAAGAACAAGATCCTTGTATGAAA 1182
> AT1G07780.3 | Symbols: PAI1, TRP6 | phosphoribosylanthranilate
isomerase 1 | chr1:2410120-2412675 REVERSE LENGTH=1512
Length=1512
Score = 1382 bits (748), Expect = 0.0
Identities = 943/1034 (91%), Gaps = 26/1034 (3%)
Strand=Plus/Plus
Query 62 TTTTTGTTTTTCCGCCATTCTTGTCGATCTTCTTCAGCCGTACAACCG-C-CGTCTCTGC 119
||||| ||||||||||||||||||||||||||||||| |||| ||||| | |||||||||
Sbjct 320 TTTTTATTTTTCCGCCATTCTTGTCGATCTTCTTCAGTCGTAAAACCGCCGCGTCTCTGC 379
Query 120 TGA---T-C-C-TC-C---TC-T----GGGAGAAAATTCGATATCATCTGCGA-TTCCGG 163
||| | | | || | || | |||||||||| | ||| |||||| || ||||
Sbjct 380 TGACCCTCCTCTTCTCATTTCATCGACGGGAGAAAATCCCATACCATCTGAGATTTCCAA 439
Query 164 CAGTGGAATTAAGATGTCAACAGGAATATCCACAGATCTCC-TCGCT-CATTCTAGAGCT 221
||||| ||||||||||||||||||||||||||| ||||||| | | | |||| | |||||
Sbjct 440 CAGTGAAATTAAGATGTCAACAGGAATATCCACTGATCTCCAT-G-TCCATTTTGGAGCT 497
Query 222 TTGAATTTCTCCAGAACCTACAAATCTGGTTTAAGCTATCGAAAGGTGTCTGTCTCGAGA 281
| |||||||| | |||||||||||||||||||||| |||||| ||||||| | ||||||
Sbjct 498 CTAAATTTCTCAAAAACCTACAAATCTGGTTTAAGCAATCGAACGGTGTCTTTTTCGAGA 557
Query 282 GTCGGGTATGCTCAGAACAGGAAATTCAGCTGCAGTGTTTCCAGCACAGAGAATGTAGCT 341
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 558 GTCGGGTATGCTCAGAACAGGAAATTGAGCTGCAGTGTTTCCAACACAGAGAATGTAGCT 617
Query 342 CCTAAGGATGATGAAAGAGCAAAGGATAGACCTTTGGTTAAGATGTGTGGCATCACATCA 401
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 618 CCTAAGGATGATGAAAGAGGAAAGGATAGACCTTTGGTTAAGATGTGTGGCATCACATCA 677
Query 402 GCCAGAGATGCTGCTATGGCAGTTGAGGCTGGTGCTGATTTCATCGGGATGATTGTATGG 461
||||||||||| ||||||||||||||||||||||| ||||| || ||||||||| | |||
Sbjct 678 GCCAGAGATGCAGCTATGGCAGTTGAGGCTGGTGCCGATTTTATTGGGATGATTATTTGG 737
Query 462 CCGA-ATTCAAAACGATCCATTTCTCTTTCTGTTGCAAAGGATATCTCCAAAGTGGCGAG 520
|| | ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||
Sbjct 738 CC-ACATTCAAAACGATCTATTTCTCTTTCTGTCGCAAAGGATATCTCCAAAGTGGCCAG 796
Query 521 GGATGGTGGGGTCAAATCTGTTGGTGTTTTTGTTGATGATGATGAGAACACGATATTGCG 580
||| ||||||| |||| ||||||||||||||||||| |||||||||||||||||| || |
Sbjct 797 GGAAGGTGGGGCCAAACCTGTTGGTGTTTTTGTTGAAGATGATGAGAACACGATACTGAG 856
Query 581 AGCAGCTGATGCCTCAGACCTTGAGCTTGTGCAGCTTCATGGTAATGGTTCGCGTGCTGC 640
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 857 AGCAGCTGATTCCTCTGACCTTGAGCTTGTGCAGCTTCATGGTAATGGTTCGCGTGCTGC 916
Query 641 TTTCTCGAGGTTAGTACGCGAA-AGGAGAGTCATATATGTCCTTAATGCAAATGAGGATG 699
||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||
Sbjct 917 TTTCTCGAGGTTAGTACGC-AAGAGGAGAGTCATATATGTCCTTAATGCAAATCAGGATG 975
Query 700 GAAAGCTCCTGAATGAAGTTCCTGAAGAGGATTGTCATCTCGCTGATTGGATTCTTGTGG 759
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 976 GAAAGCTCTTGAATGAAGTTCCTGAAGAGGATTGTCATCTTGCTGATTGGATTCTTGTGG 1035
Query 760 ATAGTGCAACGGGTGGGAGTGGAAAAGGATTTAACTGGGCTCAATTCAAGTTACCTTCCA 819
||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||
Sbjct 1036 ATAGTGCAACGGGTGGGAGTGGACACGGATTTAACTGGGCTCAATTCAAGTTGCCTTCCG 1095
Query 820 TCAGAAGCAGAAATGGGTGGCTCTTAGCTGGCGGAATCAATCCGACAAACGTGTCAGAAG 879
||||||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct 1096 TCAGAAGCAGAAATGGGTGGCTCTTAGCTGGGGGAATCAATCCAACAAATGTTTCAGAAG 1155
Query 880 CTCTTTCTATCCTTCAACCTGATGGAATTGATGTTAGCAGCGGTATCTGCGGTACAGACG 939
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1156 CTCTTTCTATCCTTCAACCTGATGGAATTGATGTTAGTAGCGGTATTTGCGGTACAGACG 1215
Query 940 GCATCCAGAAGGATAAGGCTAAGATAAGTTCCTTCATAACTGCAGTTCGCTCTGTACACT 999
| ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct 1216 GTATCCAGAAGGATAAGTCTAAGATAAGCTCCTTTATAACTGCAGTTCGCTCTGTACACT 1275
Query 1000 ACTAATGGCTAGCAATATAAGGCAAGGTAATTTTTCTTGTAACTATAGTTTCGAGCATCA 1059
||||||||| |||||||||| || |||||||| ||||||||||||||||| ||||||||
Sbjct 1276 ACTAATGGCAAGCAATATAAACCACGGTAATTTATCTTGTAACTATAGTTTTGAGCATCA 1335
Query 1060 ACCTGTTGTGTCCA 1073
||||||||| ||||
Sbjct 1336 ACCTGTTGTTTCCA 1349
Score = 56.5 bits (30), Expect = 5e-07
Identities = 30/30 (100%), Gaps = 0/30 (0%)
Strand=Plus/Plus
Query 1110 GGCTCTCAAGAACAAGATCCTTGTATGAAA 1139
||||||||||||||||||||||||||||||
Sbjct 1467 GGCTCTCAAGAACAAGATCCTTGTATGAAA 1496
> AT1G29410.2 | Symbols: PAI3 | phosphoribosylanthranilate isomerase
3 | chr1:10297877-10300005 REVERSE LENGTH=1638
Length=1638
Score = 915 bits (495), Expect = 0.0
Identities = 602/653 (92%), Gaps = 9/653 (1%)
Strand=Plus/Plus
Query 132 GGGAGAAAATTCGATATCATCTGCGA-TTCCGGCAGTG--GAATTAAGATGTCAACAGGA 188
|||||||||| |||||||||||| || |||| ||||| |||| ||||||| ||||||
Sbjct 28 GGGAGAAAATCCGATATCATCTGAGATTTCCAACAGTGTCAAATTGAGATGTCTACAGGA 87
Query 189 ATATCCACAGATCTCCTCGCT-CATTCTAGAGCTTTGAATTTCTCCAGAACCTACAAATC 247
|||||| | ||||||| | || ||| |||||||| |||||||||||| ||||| ||||||
Sbjct 88 ATATCCTCTGATCTCCAC-CTCCATCCTAGAGCTCTGAATTTCTCCAAAACCTCCAAATC 146
Query 248 TGGTTTAAGCTATCGAAAGGTGTCTGTCTCGAGAGTCGGGTATGCTCAGAACAGGAAATT 307
|||||||||| |||||||||||||| | || || ||||||||||||||||||||||||||
Sbjct 147 TGGTTTAAGCAATCGAAAGGTGTCTTTTTCAAGTGTCGGGTATGCTCAGAACAGGAAATT 206
Query 308 CAGCTGCAGTGTTTCCAGCACAGAGAATGTAGCTCCTAAGGATGATGAAAGAGCAAAGGA 367
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 207 GAGCTGCAGTGTTTCCAGCACAGAGAATGTAGCTCCTAAGGATGATGACAGAGGAAAGGA 266
Query 368 TAGACCTTTGGTTAAGATGTGTGGCATCACATCAGCCAGAGATGCTGCTATGGCAGTTGA 427
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 267 TAGACCTTTGGTTAAGATGTGTGGCATCACATCAGCCAGAGATGCAGCTATGGCAGTTGA 326
Query 428 GGCTGGTGCTGATTTCATCGGGATGATTGTATGGCCGA-ATTCAAAACGATCCATTTCTC 486
|||||||||||||||||| ||||||||| | ||||| | |||||||||||||||||||||
Sbjct 327 GGCTGGTGCTGATTTCATTGGGATGATTATTTGGCC-ACATTCAAAACGATCCATTTCTC 385
Query 487 TTTCTGTTGCAAAGGATATCTCCAAAGTGGCGAGGGATGGTGGGGTCAAATCTGTTGGTG 546
||||||||||||||||||| ||| ||||||| ||||| ||||||| |||| |||||||||
Sbjct 386 TTTCTGTTGCAAAGGATATTTCCCAAGTGGCCAGGGAAGGTGGGGCCAAACCTGTTGGTG 445
Query 547 TTTTTGTTGATGATGATGAGAACACGATATTGC-GAGCAGCTGATGCCTCAGACCTTGAG 605
|||||||||| |||||||||||||||||| | | ||||||||||| |||| |||||||||
Sbjct 446 TTTTTGTTGAAGATGATGAGAACACGATACT-CAGAGCAGCTGATTCCTCTGACCTTGAG 504
Query 606 CTTGTGCAGCTTCATGGTAATGGTTCGCGTGCTGCTTTCTCGAGGTTAGTACGCGAAAGG 665
||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||
Sbjct 505 CTTGTGCAGCTTCATGGTAATAGTTCACGTGCTGCTTTCTCGAGGTTAGTACGGGAAAGG 564
Query 666 AGAGTCATATATGTCCTTAATGCAAATGAGGATGGAAAGCTCCTGAATGAAGTTCCTGAA 725
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 565 AAAGTCATATATGTCCTTAATGCAAATGAGGATGGAAAGCTCCTGAATGTAGTTCCTGAA 624
Query 726 GAGGATTGTCATCTCGCTGATTGGATTCTTGTGGATAGTGCAACGGGTGGGAG 778
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 625 GAGGATGGTCATCTCGCTGATTGGATTCTTGTGGATAGTGCAACGGGTGGGAG 677
Score = 453 bits (245), Expect = 2e-126
Identities = 306/335 (91%), Gaps = 6/335 (2%)
Strand=Plus/Plus
Query 778 GTGGAAAAGGATTTAACTGGGCTCAATTCAAGTTACCTTCCATCAGAAGCAGAAATGGGT 837
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 838 GTGGAAAAGGATTTAACTGGGCTCAATTCAAGTTACCTTCCGTCAGAAGCAGAAATGGGT 897
Query 838 GGCTCTTAGCTGGCGGAATCAATCCGACAAACGTGTCAGAAGCTCTTTCTATCCTTCAAC 897
||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||
Sbjct 898 GGCTCTTAGCTGGGGGAATCAATCCAACAAATGTTTCAGAAGCTCTTTCTATCCTTCAAC 957
Query 898 CTGATGGAATTGATGTTAGCAGCGGTATCTGCGGTACAGACGGCATCCAGAAGGATAAGG 957
|||||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||
Sbjct 958 CTGATGGAATTGATGTTAGCAGTGGTATTTGCGGCATAGACGGCATCCAGAAGGATAAGT 1017
Query 958 CTAAGATAAGTTCCTTCATAACTGCAGTTCGCTCTGTACACTACTAATGGCTAGCAATAT 1017
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 1018 CTAAGATAAGTTCCTTCATAACTGCAGTTCGATCTGTACACTACTAATGGCTTGCAATAT 1077
Query 1018 AAGGCAAGGTAATTTTTCTTGTAACTATAGTTTCGAGCATCAACCTGTTGTG-TC-CATT 1075
||| ||||||||||| ||||||||||||||||||||||||||| | || || | ||
Sbjct 1078 AAGCCAAGGTAATTTGTCTTGTAACTATAGTTTCGAGCATCAAAATAATGCACTCTCTTT 1137
Query 1076 -CATCAGTAATAGA--TTTAAATTTAAAGTGTTGG 1107
||||||||||| | |||||||| ||| ||||||
Sbjct 1138 TCATCAGTAATAAAGGTTTAAATTAAAA-TGTTGG 1171
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55873206585
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5