BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487406
Length=2494
Score E
Sequences producing significant alignments: (Bits) Value
AT5G06050.1 | Symbols: | Putative methyltransferase family pro... 3304 0.0
AT2G39750.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 893 0.0
AT3G03370.2 | Symbols: | FUNCTIONS IN: molecular_function unkn... 86.1 2e-15
> AT5G06050.1 | Symbols: | Putative methyltransferase family protein
| chr5:1820132-1823771 FORWARD LENGTH=2312
Length=2312
Score = 3304 bits (1789), Expect = 0.0
Identities = 1987/2082 (95%), Gaps = 15/2082 (1%)
Strand=Plus/Plus
Query 21 GGTAATGCTTCT-ACGAATTCGAAGCTAATGAAGCTCTTCGT-AAGTAGCAATCTGCTCA 78
|||||||||||| | ||||| ||||||||||||||||||| | || ||||||||||||||
Sbjct 38 GGTAATGCTTCTGA-GAATTGGAAGCTAATGAAGCTCTTCCTCAA-TAGCAATCTGCTCA 95
Query 79 GAAACTCTGTTTTCTTCAAGATCTCCGCCTTTGTTTTGATCTCCGTTGCTTGTTTCTTCC 138
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 96 GAAACTCTATTTTCTTCAAGATCTCCGCCTTTGTTTTGATCTCCGTTGCTTGTTTCTTCC 155
Query 139 TCGGTAAACATTGGTCTGAGGATGGCTTCCGCCGTCTCATCTTCTTCTCCGCCGAGCCTT 198
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 156 TCGGTAAGCATTGGTCTGAGGATGGCTTCCGCCGTCTCATCTTCTTCTCCGCCGAGCCTT 215
Query 199 CTCGATCCCCCATTGTCGCACTCTCACCTGATTTCGGAAAAACGTATAACATCTCTGATT 258
| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct 216 CCCGATCTCCCATTGTCGCACTCTCACCTGATTTCGGAAAAACCTATAACATCTCTGGTT 275
Query 259 TGATCTATGAGAGTCACCCGATTTTGCCTCCGTCTTTGTCACCACCGCCGCCGCCAGATT 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 276 TGATCTATGAGAGTCACCCGATTTTGCCTCCGTCTTTGTCACCACCGCCGCCGCCAGATT 335
Query 319 CTGTTGAGCTGAAGGTGTTTGGGATCGTTAATGAGAATGGAACAATGTCTGATGA-TTTC 377
|||||||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct 336 CTGTTGAGTTGAAGGTGTTTGGAATCGTTAATGAGAACGGAACAATGTCTGATGAGTTT- 394
Query 378 CAGATTGGTGATTACGACGCTGAATCGGCGGAGACGTTGGGGAATCAGACGGAATTCGAG 437
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 395 CAGATTGGTGATTACGACGTTGAGTCGGCGGAGACGTTGGGGAATCAGACGGAATTCGAG 454
Query 438 AGTAGCGACG--G-TGATATTAAATCCACCACGGCTAGAGTTAGTGTGAGGAAATTCGAG 494
|||||||||| | |||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 455 AGTAGCGACGACGATGATATTAAATCCACCACAGCTAGAGTTAGTGTGAGGAAATTTGAG 514
Query 495 ATGTGTTCGGAGAATATGACGGAGTACATTCCTTGTTTGGATAATGTAGAAGCCATCAAA 554
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 515 ATTTGTTCGGAGAATATGACTGAGTACATTCCTTGTTTGGATAATGTAGAAGCCATCAAA 574
Query 555 AGGCTTAATTCGACGGCGCGTGGAGAGCGATTTGAGCGGAATTGTCCTAAAGAAGGAATG 614
||||||||||| ||||||||||| |||||||| || |||||||||||||| || ||||||
Sbjct 575 AGGCTTAATTCAACGGCGCGTGGTGAGCGATTCGAACGGAATTGTCCTAACGATGGAATG 634
Query 615 GGGTTGAATTGCACCGTTCCTG-TTCC-CAATGGGTACCGTCCTCCGATTCCGTGGCCGG 672
|| ||||||||||||||||| | |||| ||| || |||||| ||||||||||||||| |
Sbjct 635 GGATTGAATTGCACCGTTCC-GATTCCTCAA-GGATACCGTAGTCCGATTCCGTGGCC-G 691
Query 673 A-AAGCCGTGATGAGGTGTGGTTCAACAATGTTCCACATACTAAACTTGTTGAAGATAAA 731
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 692 AGAAGCCGTGATGAGGTGTGGTTCAACAATGTTCCACATACTAAACTTGTTGAAGACAAA 751
Query 732 GGTGGTCAAAACTGGATTTACAAAGAGAATGACAAATTCAAGTTTCCTGGTGGTGGTACT 791
||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 752 GGTGGTCAAAATTGGATTTATAAAGAGAATGACAAATTTAAGTTTCCTGGTGGTGGTACT 811
Query 792 CAGTTTATACACGGGGCTGATCAGTACTTGGATCAGATCTCTCAGATGATTCCTGATATC 851
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 CAGTTTATACACGGAGCTGATCAGTACTTGGATCAGATCTCTCAGATGATTCCTGATATT 871
Query 852 AGCTTTGGTAATCATACACGAGTTGTTCTTGACATTGGATGCGGTGTGGCAAGTTTTGGT 911
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 872 AGCTTTGGTAACCATACACGAGTTGTTCTTGACATTGGATGTGGTGTGGCAAGTTTTGGT 931
Query 912 GCCTACTTAATGTCACGAAATGTCTTGACTATGTCTATAGCTCCAAAAGATGTTCACGAG 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 932 GCCTACTTAATGTCACGAAATGTCTTGACTATGTCTATAGCTCCAAAAGATGTTCACGAG 991
Query 972 AACCAGATACAATTTGCTCTCGAGCGTGGTGTTCCTGCAATGGTGGCAGCATTCACAACA 1031
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 992 AACCAGATACAGTTTGCTCTTGAGCGTGGTGTTCCTGCAATGGTGGCAGCATTCACAACA 1051
Query 1032 CGGAGACTGTTGTACCCAAGCCAAGCTTTTGATTTGGTTCATTGTTCAAGATGTAGAATC 1091
|||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1052 CGGAGATTGTTGTATCCAAGCCAAGCTTTTGATTTGGTACATTGTTCAAGATGTAGAATC 1111
Query 1092 AACTGGACTCGTGATGATGGGATCCTGCTCCTTGAAGTTAATAGGATGCTTCGTGCCGGA 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1112 AACTGGACTCGTGATGATGGGATCCTGCTCCTTGAAGTTAATAGGATGCTTCGTGCCGGA 1171
Query 1152 GGATATTTTGTTTGGGCAGCACAACCTGTATATAAGCATGAAAAGGCCTTGGAAGAACAG 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1172 GGATATTTTGTTTGGGCAGCACAACCTGTATATAAGCATGAAAAGGCCTTGGAAGAACAG 1231
Query 1212 TGGGAAGAGATGCTAAACCTTACCACTAGGCTATGCTGGGTTCTTGTAAAGAAGGAAGGA 1271
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1232 TGGGAAGAGATGCTAAACCTGACCACTAGGCTGTGCTGGGTTCTTGTAAAGAAGGAAGGA 1291
Query 1272 TATATAGCTATCTGGCAGAAGCCTGTAAATAACACTTGTTATCTTAGTCGTGGTGCTGGA 1331
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1292 TATATAGCTATCTGGCAGAAGCCTGTAAATAACACTTGTTACCTAAGTCGTGGTGCTGGA 1351
Query 1332 GTCACTCCTCCTTTGTGCAATTCTGAAGATGACCCAGATAATGTTTGGTACATGGATCTG 1391
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1352 GTCAGTCCTCCTTTGTGCAATTCTGAAGATGACCCAGATAATGTTTGGTACGTGGATCTG 1411
Query 1392 AAGGCATGCATTACTAGAATTGAAGAAAATGGATATGGAGCGAATCTTGCTCCTTGGCCA 1451
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1412 AAGGCATGCATCACTAGAATTGAAGAAAATGGATATGGAGCAAATCTTGCTCCTTGGCCA 1471
Query 1452 GCTCGTTTACAGACCCCACCGGATAGGCTGCAGACAATACAAATTGATTCTTACATAGCC 1511
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1472 GCTCGTTTACTGACCCCACCGGATAGGCTGCAGACAATACAAATTGATTCATACATAGCC 1531
Query 1512 CGAAAAGAGCTCTTTGTAGCTGAATCAAAGTACTGGAAAGAAATAATATCAAACTATGTA 1571
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1532 CGAAAAGAGCTATTTGTAGCCGAATCAAAGTACTGGAAAGAAATAATATCAAACTATGTA 1591
Query 1572 AATGCCCTACACTGGAAGCAGATAGGACTCAGAAATGTCTTGGACATGAAAGCTGGATTT 1631
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1592 AATGCCCTACACTGGAAGCAGATAGGACTCAGAAATGTCTTGGACATGAGAGCTGGATTT 1651
Query 1632 GGCGGATTTGCAGCTGCATTAGCTGAGCTAAAGGTTGATTGCTGGGTTCTCAACGTTATC 1691
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||
Sbjct 1652 GGCGGATTTGCAGCTGCATTAGCTGAGCTAAAGGTTGACTGCTGGGTTCTTAACGTCATC 1711
Query 1692 CCAGTCAGTGGTCCCAACACATTACCCGTTATATATGACCGTGGACTACTAGGAGTAATG 1751
||||| ||||||||||||||||| || |||||||||||||||||||| || ||||| |||
Sbjct 1712 CCAGTGAGTGGTCCCAACACATTGCCTGTTATATATGACCGTGGACTGCTTGGAGTTATG 1771
Query 1752 CATGATTGGTGTGAGCCATTCGATACTTACCCGAGAAGCTACGATTTGCTGCATGCCGCG 1811
|| ||||||||||| || || ||||||||||| |||| |||||||||||||||||| |||
Sbjct 1772 CACGATTGGTGTGAACCTTTTGATACTTACCCAAGAACCTACGATTTGCTGCATGCTGCG 1831
Query 1812 GGTCTATTTTCCATTGAAAGAAAAAGGTGCAACATGACAACGATGATGCTAGAGATGGAC 1871
||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1832 GGTCTGTTTTCCATTGAAAGAAAAAGATGCAACATGACAACAATGATGCTAGAGATGGAC 1891
Query 1872 CGGATTTTGAGACCTGGAGGACGTGTATACATACGGGATACTATCAATGTAATGAGTGAG 1931
|||||||| ||||||||||||||||||||||||||||| || |||||||||| |||||||
Sbjct 1892 CGGATTTTAAGACCTGGAGGACGTGTATACATACGGGACACAATCAATGTAACGAGTGAG 1951
Query 1932 CTTCAAGAGATTGGAAACGCAATGAGGTGGCACACGAGCTTACGTGAAACTGCTGAAGGA 1991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1952 CTTCAAGAGATTGGAAACGCAATGAGGTGGCACACGAGCTTACGTGAAACTGCTGAAGGA 2011
Query 1992 CCTCACGCAAGTTACAGGGTTCTCGTATGTGAGAAGCGGTTAGAATCGTCTGAGAAGCGT 2051
|||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct 2012 CCTCACTCAAGTTACAGGGTTCTCTTATGTGAGAAGCGGTTTGAATCGTCTGAGAAGCGT 2071
Query 2052 CGTACCAAGAAGAAGAGGAAGACTAAAGGAAAAAGAGCTTGA 2093
||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2072 CGTACCAAGAAGAGGAGGAAGACTAAAGGAAAAAGAGCTTGA 2113
Score = 532 bits (288), Expect = 5e-150
Identities = 378/418 (90%), Gaps = 20/418 (5%)
Strand=Plus/Plus
Query 2095 AACATGACAACGATGATGCTAGAGATGGACCGGATTTTAAGACCTGGAGGACGTGTATAC 2154
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1862 AACATGACAACAATGATGCTAGAGATGGACCGGATTTTAAGACCTGGAGGACGTGTATAC 1921
Query 2155 ATACGGGACACAATCAATGTAATGAGCT-AGATTCAAGAGATTGGAAACGCAATGAGGTG 2213
|||||||||||||||||||||| ||| | || ||||||||||||||||||||||||||||
Sbjct 1922 ATACGGGACACAATCAATGTAACGAG-TGAGCTTCAAGAGATTGGAAACGCAATGAGGTG 1980
Query 2214 GCACATGAGCTTATGTAAAACTGCTGAAGGACCTCACTCAAGTTACAGGATTCTCTTATG 2273
||||| ||||||| || |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1981 GCACACGAGCTTACGTGAAACTGCTGAAGGACCTCACTCAAGTTACAGGGTTCTCTTATG 2040
Query 2274 TGAGAAGCAGTTTGAATCGTCTGAGAAGCGTCGTACCAAGAAGAAGAGGAAGAGTAGAGG 2333
|||||||| ||||||||||||||||||||||||||||||||||| |||||||| || |||
Sbjct 2041 TGAGAAGCGGTTTGAATCGTCTGAGAAGCGTCGTACCAAGAAGAGGAGGAAGACTAAAGG 2100
Query 2334 GAAAAA-AGCTTGACATTTACATAGAATGTAAGTGATGGGCTACAAGTTTCTGGGGATCT 2392
||||| |||||||||||| |||||||| ||||| ||||||| || |||||||||||||
Sbjct 2101 -AAAAAGAGCTTGACATTTTCATAGAATACAAGTGCTGGGCTAGAATTTTCTGGGGATCT 2159
Query 2393 TTG-ATCAATGG----T--T-AGTTTAGTTGGGAGGCTTTT-GGAATTTTAGAAAAGTTA 2443
||| |||||||| | | |||||||||||||||||||| |||||||||||||| |||
Sbjct 2160 TTGGATCAATGGACAATGGTTAGTTTAGTTGGGAGGCTTTTTGGAATTTTAGAAAAATTA 2219
Query 2444 GTGAC-T----C--TGAAACTGTTTGTGAGGTTTTGGCGTTTAACCCTCTTTAACGTT 2494
| ||| | | |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2220 GGGACCTGAAACAGTGAAACTGTTTGTGAGGTTTTGGCGTTTAACCCTCTTTAAAGTT 2277
> AT2G39750.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr2:16578824-16582404
REVERSE LENGTH=2370
Length=2370
Score = 893 bits (483), Expect = 0.0
Identities = 1245/1605 (78%), Gaps = 84/1605 (5%)
Strand=Plus/Plus
Query 467 GGCTAGAGTTAGTGTGAGGAAATTCGAGATGTGTTCGGAGAATATGACG-GAGTACATTC 525
|||||| ||||| | | |||||| | ||||||| | |||| ||||| | ||||| || |
Sbjct 630 GGCTAGGGTTAGAATTAAGAAATTTGGGATGTGTCCTGAGAGTATGA-GAGAGTATATAC 688
Query 526 CTTGTTTGGATAAT-GTAGAAGCCATCAAA-AGGCTTAATTCGACGGCGCGTGGAGAGCG 583
|||||||||||||| | || | || ||| | |||||| ||||| | ||| || ||| |
Sbjct 689 CTTGTTTGGATAATACT-GATGTGAT-AAAGAAGCTTAAATCGACAGAGCGAGGTGAGAG 746
Query 584 ATTTGAGCGGAATTGTCCTAAAG-AAGG-AATGGGGTTGAATTGCACCGTTCCTGTTCCC 641
||| ||||| |||||||| || |||| || || ||||||||| ||||| |||
Sbjct 747 ATTCGAGCGTCATTGTCCT-GAGAAAGGTAA-AGGCTTGAATTGCTTAGTTCCACCTCCT 804
Query 642 AATGGGTACCGTCCTCCGATTCCGTGGCCGGAAAGCCGTGATGAGGTGTGGTTCAACAAT 701
|| || ||||||| |||||||| ||||| |||||||||| ||||| ||||| | ||||
Sbjct 805 AAAGGTTACCGTCAGCCGATTCCATGGCCTAAAAGCCGTGACGAGGTATGGTTTAGCAAT 864
Query 702 GTTCCACATACTAAACTTGTTGAAGATAAAGGTGGTCAAAACTGGATTTACAAAGAGA-A 760
||||| |||||| ||||||||||| ||||| ||||| |||||||||| | | |||| |
Sbjct 865 GTTCCTCATACTCGGCTTGTTGAAGACAAAGGAGGTCAGAACTGGATTT-C-ACGAGACA 922
Query 761 TG-ACAAATTCAAGTTTCCTGGTGGTGGTACTCAGTTTATACACGGGGCTGATCAGTACT 819
| |||| |||||||||||||| |||||||| |||||||| || ||||||||||||||||
Sbjct 923 AGAACAAGTTCAAGTTTCCTGGAGGTGGTACACAGTTTATTCATGGGGCTGATCAGTACT 982
Query 820 TGGATCAGATCTCTCAGATGATTCCTGATATCAGC-TTTGGTAATCATA-CACGAGTTGT 877
|||| ||||| ||| ||||| || ||||||| | | ||||| || |||| | | ||||
Sbjct 983 TGGACCAGATGTCTAAGATGGTTTCTGATATTA-CGTTTGGCAAGCATATTA-GGGTTGC 1040
Query 878 TCTTGACATTGGATGCGGTGTGGCAAGTTTTGGTGCCTACT-TAATGTCACGAAATGTCT 936
| | || |||| || |||||||| ||||||||||| || | || |||| || |||||
Sbjct 1041 TATGGATGTTGGTTGTGGTGTGGCGAGTTTTGGTGCTTA-TCTATTGTCTCGTGATGTCA 1099
Query 937 TGACTATGTCTATAGCTCCAAAAGATGTTCACGAGAACCAGATACAATTTGCTCTCGAGC 996
|||| |||||| | || ||||||||||| || |||||||| || ||||||||||| ||||
Sbjct 1100 TGACAATGTCTGTTGCACCAAAAGATGTCCATGAGAACCAAATTCAATTTGCTCTTGAGC 1159
Query 997 GTGGTGTTCCTGCAATGGTGGCAGCATTCACAACACGGAGACTGTTGTACCCAAGCCAAG 1056
||||||| ||||| |||| ||||||||| | ||| || | |||| || ||||||||||
Sbjct 1160 GTGGTGTGCCTGCTATGGCGGCAGCATTTGCGACAAGGCGTTTGTTATATCCAAGCCAAG 1219
Query 1057 CTTTTGAT-TTGGTTCATTGTTCAAGATGTAGAATCAACTGGACTCGTGATGATGGGATC 1115
|||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1220 CTTTTGATCTT-ATTCATTGTTCAAGATGTAGAATCAACTGGACTCGTGATGATGGAATT 1278
Query 1116 CTGCTCCTTGAAGTT-AATAGGATGCTTCGTGCCGGAGGATATTTTGTTTGGGCAGCACA 1174
|||||||||| | | ||||| ||||| || || ||||||||||||| |||||| |||||
Sbjct 1279 TTGCTCCTTGA-GATCAATAGAATGCTGCGCGCTGGAGGATATTTTGCTTGGGCTGCACA 1337
Query 1175 ACCTGTATATAAGCATGAAAAGGCCTTGGAAGAACAGTGGGA-AGAGATGCTAAACCTTA 1233
||||| |||||||||||| || ||||||||||| ||| | ||| ||||| || ||||
Sbjct 1338 GCCTGTTTATAAGCATGAACCCGCTTTGGAAGAACAATGG-ACAGAAATGCTGAATCTTA 1396
Query 1234 CCACTAGGCTATGCTGGGTTCTTG-TAAAGAAGGAAGGATATATAGCTATCTGGCAGAAG 1292
| | ||| || |||||| ||| |||||||||||||||| | || ||||||||||||
Sbjct 1397 CTATTAGCCTCTGCTGGAAA-TTGGTAAAGAAGGAAGGATACGTTGCAATCTGGCAGAAG 1455
Query 1293 CCTGTAAATAAC-ACTTGTTATCTT-AGTCGTG-GTGCTGG-AGTCA-C-TCCTCCTT-T 1345
||| | || ||| ||| | ||| || ||||||| | ||||| | | | | ||||| || |
Sbjct 1456 CCTTTCAACAACGACT-GCTAT-TTGAGTCGTGAG-GCTGGGACTAAACCTCCTCTTTGT 1512
Query 1346 G-TGCAATTCTGAAGATGACCCAGATAATGTTTGGTACATGGATCTGAAGGCATGCATTA 1404
| || ||| | || ||| ||| |||||||||||||||| ||||||| | ||||| |
Sbjct 1513 GATG-AAT-CAGATGAT--CCC-GATAATGTTTGGTACACAAATCTGAAACCTTGCATCA 1567
Query 1405 CTAGAAT---TGAAGAAAATGGATATGGAGCGAATCTTGCTCCTT--GGCCAGCTCGTTT 1459
| | || ||| |||| || || |||| ||| | | | |||| |||| || ||| |
Sbjct 1568 GTCGCATACCTGA-GAAAG-GG-TACGGAG-GAAACGTCC-CCTTATGGCCTGCCCGTCT 1622
Query 1460 ACAGACCCCACCGGATAGGCTGCAGACAATACAAATT-GATTCTTACATAGCCCGAAAAG 1518
|| || ||||| |||||||||||||| ||| ||||| ||||| ||||| || | ||||
Sbjct 1623 GCATACTCCACCTGATAGGCTGCAGACGATA-AAATTTGATTCCTACATTGCTAGGAAAG 1681
Query 1519 AGCTCTTTGTAG-CTGAATCAAAGTACTGGAAAGAAATAATATCAAA-CTATGTAAATGC 1576
|||| || || | |||||||| || ||||| |||||||| | |||||| ||
Sbjct 1682 AGCTATTCA-AGGCAGAATCAAAATATTGGAATGAAATAAT-TGGGGGCTATGTTCGCGC 1739
Query 1577 CCTACACTGGAAGCAGATAGGA-CTCAGAAATGTCTTGGACATGAAAGCTGGATTTGGCG 1635
| || | ||||| |||| | | || |||||||| |||||||||| ||| || |||||||
Sbjct 1740 CTTAAAATGGAAAAAGAT-GAAACTAAGAAATGTTTTGGACATGAGAGCAGGCTTTGGCG 1798
Query 1636 GATTTGCAGCTGCATTAGCTGAGC-TAAAGGTTGATTGCTGGGTTCTCAA-CGTTATCCC 1693
|||||||||||||| || ||| | |||| | |||||||||||||| || ||| | ||
Sbjct 1799 GATTTGCAGCTGCACTAAATGATCATAAAC-TCGATTGCTGGGTTCT-AAGCGTGGTTCC 1856
Query 1694 AGTCAGTGGTCCCAACACATTACCCGTTATATATGACCGTGGACTACTAGGAGTAATGCA 1753
|||||||| || |||||||| || || || |||||||||||||| ||||||| |||||
Sbjct 1857 TGTCAGTGGGCCTAACACATTGCCTGTCATTTATGACCGTGGACTGTTAGGAGTGATGCA 1916
Query 1754 TGATTGGTGTGAGCCATTCGATACTTACCCGA-GAAGC-TACGATTTGCTG-CATGCCGC 1810
||||||||||| ||||| ||||| ||||| | | | | || || || || |||||| |
Sbjct 1917 CGATTGGTGTGAACCATTTGATACATACCC-ACGGA-CATATGACTT-CTTACATGCCTC 1973
Query 1811 GGGTCTATTTTCCATTGAAAGAAAAAGGTGCAACATGACAACGATGAT-GCTAGAGATGG 1869
|| || || || || || |||||||| || | ||| |||| || || | |||||||||
Sbjct 1974 TGGACTCTTCTCGATCGAGAGAAAAAGATGTGAGATGTCAACCAT-ATTGTTAGAGATGG 2032
Query 1870 ACCGGATTTTGAGACCTGGAGGACGTGTATACAT-ACGGGATACTATCAATGTAATG-AG 1927
||||||| || ||||| || ||| | | |||||| | ||||| | || |||| ||| |
Sbjct 2033 ACCGGATATTAAGACCCGGTGGAAGAGCATACATTA-GGGATTCAATTGATGTTATGGA- 2090
Query 1928 TGAGCTTCAAGAGATTGGAAACGCAATGAGGT-GGCACACGAGCT-TACGTGAAAC-TGC 1984
||| ||||||| || ||| || ||| ||| |||| || || | ||||| || | |
Sbjct 2091 TGAAATTCAAGAAATCACAAAGGCCATG-GGTTGGCATACTT-CTCTGCGTGACACATCC 2148
Query 1985 TGAAGGACCTCACGCAAGTTACAGGGTTCTCGTATGTGAGAAGCG 2029
|| || |||||||||||||||||| |||| ||| ||||||||
Sbjct 2149 -GAGGGTCCTCACGCAAGTTACAGGATTCTAACATGCGAGAAGCG 2192
> AT3G03370.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana
protein match is: DegP protease 7 (TAIR:AT3G03380.1). |
chr3:797254-799148 REVERSE LENGTH=1171
Length=1171
Score = 86.1 bits (46), Expect = 2e-15
Identities = 52/55 (95%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 1378 GGTACATGGATCTGAAGGCATGCATTACTAGAATTGAAGAAAATGGATATGGAGC 1432
||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1116 GGTACGTGGATCTCAAGGCATGCATAACTAGAATTGAAGAAAATGGATATGGAGC 1170
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123761848381
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5