BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487448
Length=1921
Score E
Sequences producing significant alignments: (Bits) Value
AT5G06390.1 | Symbols: FLA17 | FASCICLIN-like arabinogalactan p... 2342 0.0
AT3G11700.1 | Symbols: FLA18 | FASCICLIN-like arabinogalactan p... 1112 0.0
AT3G52370.1 | Symbols: FLA15 | FASCICLIN-like arabinogalactan p... 505 8e-142
> AT5G06390.1 | Symbols: FLA17 | FASCICLIN-like arabinogalactan
protein 17 precursor | chr5:1952851-1955788 FORWARD LENGTH=2116
Length=2116
Score = 2342 bits (1268), Expect = 0.0
Identities = 1439/1523 (94%), Gaps = 6/1523 (0%)
Strand=Plus/Plus
Query 1 AAAGAAAGTAAACTCTTTCACC--AAAAAAGAAAGAAAATTTATTGTTCCATCTTTCTGA 58
|||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 1 AAAGAAAGTAAACTCTTTCACCAAAAAAAATAAAGAAAATTTATTGTTCCATCTTTCTGA 60
Query 59 TAATCCGATCTTAC--AGAGAGAGCTCCATGGGTCGTCGCATCTATGGTGGCTCCGCCGT 116
||||| |||||||| |||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 61 TAATCGGATCTTACAGAGAGAGAGCTCCATGGATCGCCGCATCTATGGTGGCTCCGCCGT 120
Query 117 CATTCATATCTTTCTTTTCTTCTTCGTCCTAATCTTCTCCGCCGCATCTGCATTATCCAA 176
||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 121 CATTCATCTCTTTCTCTTCTTCTCCGTCCTAATCTTCTCCGCCGCATCTGCATTATCCAA 180
Query 177 GAACCCGAATCCTTCTTCCGGGTCAGGTCAGATCAACTCCAACTCTGTCCTCGTAGCTCT 236
||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 181 GAACCAGTCTCCTTCTTCCGGGTCGGGTCAGATCAACTCCAACTCTGTCCTCGTAGCTCT 240
Query 237 TCTTGACTCTCGTTACACTGAGCTAGCTGAGCTCGTCGAGAAAGCTCTTCTCCTCCAGAC 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 241 TCTTGACTCTCGTTACACTGAGCTAGCTGAGCTCGTCGAGAAAGCTCTTCTCCTTCAGAC 300
Query 297 ACTTGAAGACGCTGTTGGTCGTCACAATATTACCATTTTTGCCCCTCGCAATGAAGCTCT 356
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 301 ACTTGAAGACGCTGTTGGTCGTCACAATATTACCATTTTTGCTCCTCGCAATGAAGCTCT 360
Query 357 TGAACGTGACCTTGACCCTGAGTTCAAGAGGTTCTTGCTCGAGCCAGGTAATCTCAAATC 416
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 361 TGAGCGTGACCTTGACCCTGAGTTCAAGCGGTTCTTGCTCGAGCCAGGTAATCTCAAATC 420
Query 417 TCTCCAAACACTCCTAATGTTCCACATTATACCCAATCGGGTCGGGTTGGACCAATGGCC 476
||| ||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 421 TCTGCAAACACTCCTCATGTTCCACATTATACCCAATCGGGTCGGGTCGAACCAATGGCC 480
Query 477 TCCAGAAGAATCGGGTCGGGTCAAGCACCACACGCTAGGGAACGATCAGGTCCATTTGAG 536
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 481 TTCAGAAGAATCGGGTCGGGTCAAGCACCACACGCTAGGGAACGATCAGGTCCGTTTGAG 540
Query 537 CAATGGAGAAGGAAAAAAGATGGTTGATCTAGCTGAGATTATCCGACCCGATGATTTGAC 596
||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 541 CAACGGACAAGGAAAAAAGATGGTTGATTTAGCTGAGATTATCCGACCCGATGATTTGAC 600
Query 597 CCGACCCGACGGATTGATCCACGGGATCGAACGGCTTCTCATTCCTCGCTCCGTTCAAGA 656
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 601 CCGACCCGACGGATTGATCCACGGGATTGAACGGCTTCTCATTCCTCGCTCTGTTCAAGA 660
Query 657 AGATTTCAATCGTCGTCGTAGCCTCCAGTCAATCACCGCCGTTTTACCCGAAGGAGCTCC 716
|||||||||||| ||||||||||| || |||||| ||||||| ||||| |||||||||||
Sbjct 661 AGATTTCAATCGCCGTCGTAGCCTTCAATCAATCTCCGCCGTCTTACCTGAAGGAGCTCC 720
Query 717 TGAAGTTGACCCGAGAACCAACCGTCTTAAGAAACCTGCAGCTCCAGTCCCCGCCGGATC 776
||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||
Sbjct 721 TGAAGTTGACCCGAGAACCAACCGTCTCAAGAAACCCGCAGCTCCAGTACCCGCCGGATC 780
Query 777 TCCACCGGCTCTTCCGATCCAATCCGCCATGGCTCCTGGTCCATCGCTAGCTCCGGCACC 836
|||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||||
Sbjct 781 TCCACCAGCTCTTCCGATCCAATCCGCTATGGCCCCTGGTCCGTCGCTAGCTCCGGCACC 840
Query 837 AGCTCCGGGACCTGGAGGCAAGCAGCACCACTTCGACGGTGAAGCTCAAGTCAAAGATTT 896
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 841 AGCTCCGGGACCTGGAGGCAAGCAGCACCACTTCGACGGTGAGGCTCAAGTCAAAGATTT 900
Query 897 CATCCACACACTGTTACATTACGGCGGTTACAACGAGATGGCGGACATTCTCGTGAATCT 956
|||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 901 CATCCATACACTGTTACATTACGGCGGTTACAACGAGATGGCAGATATTCTCGTGAATCT 960
Query 957 GACGTCACTCGCGACGGAGATGGGTCGCTTGGTGTCAGAAGGCTATGTGTTGACGGTTCT 1016
||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||| |
Sbjct 961 GACGTCACTCGCGACAGAGATGGGACGGTTGGTGTCAGAAGGCTATGTGTTAACGGTT-T 1019
Query 1017 TG-CTCCTAACGACGACGCTATGGCGAAACTGACGACGGATCAGTTGAGTGAGCCAGGAG 1075
|| |||||||||| || || ||||||||| |||| ||||||||| |||||||||||||||
Sbjct 1020 TGGCTCCTAACGATGAAGCAATGGCGAAATTGACCACGGATCAGCTGAGTGAGCCAGGAG 1079
Query 1076 CACCGGAGCAGATTGTGTATTACCATATTATCCCTGAGTATCAAACGGAGGAGAGTATGT 1135
||||||||||||| || || |||||||| |||||||||||||||||||||||||||||||
Sbjct 1080 CACCGGAGCAGATCGTATACTACCATATAATCCCTGAGTATCAAACGGAGGAGAGTATGT 1139
Query 1136 ACAATTCTGTTAGGAGATTTGGGAAGGTGAAGTTTGATACGCTGCGCTTTCCTCATAAGG 1195
|||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||
Sbjct 1140 ACAATTCTGTTAGGAGATTTGGGAAGGTGAAGTTCGATACGTTGCGTTTTCCTCATAAGG 1199
Query 1196 TTGCGGCTAAGGAAGCTGACGGTTCGGTTAAGTTTGGTGACGGTGAAAAGTCAGCGTATT 1255
||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||
Sbjct 1200 TTGCGGCTAAGGAAGCTGATGGTTCCGTTAAGTTTGGTGACGGTGAGAAGTCGGCGTATT 1259
Query 1256 TGTTCGATCCTGATATTTATACCGATGGTCGAATTTCGGTTCAAGGGATTGATGGTGTTT 1315
|||| ||||||||||| ||||| || ||||| ||||||||||| |||||||| |||||||
Sbjct 1260 TGTTTGATCCTGATATCTATACGGACGGTCGGATTTCGGTTCAGGGGATTGACGGTGTTT 1319
Query 1316 TGTTCCCTCAAGAGGAGGAGATTGTTGAATCGGTTAAGAAACCGGTTAAGAAAGTTGTTC 1375
|||| || |||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1320 TGTTTCCACAAGAGGAGGAGGTTGTTGAATCGGTTAAGAAACCGGTTAAGAAAATTGTTC 1379
Query 1376 AGCCGAGAAGAGGGAAATTGTTGGAAGTAGCCTGTAGCATGCTTGGTGCTTTTGGCAAGG 1435
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1380 AGCCGAGAAGAGGGAAATTGTTGGAAGTAGCCTGTAGTATGCTTGGTGCTTTTGGCAAGG 1439
Query 1436 AAACTTATCTCAGCAAATGCCGGTGAATTCGCAAACCCGCCAAAGAATTGACGTAAACAC 1495
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1440 ACACTTATCTCAGCAAATGCCGGTGAATTCGCAAACCCGCCAAAGAATTGATGTAAACAC 1499
Query 1496 ATTCAAAAAGCTGATTGAAGGTT 1518
|||||||||||||||||||||||
Sbjct 1500 ATTCAAAAAGCTGATTGAAGGTT 1522
Score = 204 bits (110), Expect = 3e-51
Identities = 121/126 (96%), Gaps = 1/126 (1%)
Strand=Plus/Plus
Query 1797 CGTGGACATGGGAAATGAGTTGGCTCAGGCTGTGTTTGTTGATTATTGGAGGAAAAACAC 1856
||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 1991 CGTGGACATGGGAAATGAGTTGGTTCAGGCTGTGTTTGTTGATTATTGGAGGACAAACTC 2050
Query 1857 -AAACTTAGCTGTCTTTGTGAGAAATCTCAAGTCTTAATACTGAAGTTGTCTAAATTTTG 1915
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2051 AAAACTTAGCTGTCTTTGTGAGAAATCTCAAGTCTTAATACTGAAGTTGTCTGAATTTTG 2110
Query 1916 TTTTTC 1921
||||||
Sbjct 2111 TTTTTC 2116
Score = 196 bits (106), Expect = 5e-49
Identities = 131/142 (92%), Gaps = 6/142 (4%)
Strand=Plus/Plus
Query 1530 tttttttctttttttAAATATATTTT-gggggggggggggggggTGTTTGGTC-T--TGG 1585
||||||||||| || |||| |||| |||||||||||||||||||||||||| | |||
Sbjct 1622 TTTTTTTCTTTAAATATATAT-TTTTGGGGGGGGGGGGGGGGGGTGTTTGGTCTTCATGG 1680
Query 1586 ATTATGAATACTGTAATTAGATTATATCAATCATTTTTTAATTAATTTGGTGGTGTATGA 1645
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1681 ATTATGAATACTGTAATTAGA-TATATCAATCATTTTTTAATTAATTTGGTGGTGTATGA 1739
Query 1646 GAATGAGAGTACAATAAATAAA 1667
||||||||||||| ||||||||
Sbjct 1740 GAATGAGAGTACACTAAATAAA 1761
> AT3G11700.1 | Symbols: FLA18 | FASCICLIN-like arabinogalactan
protein 18 precursor | chr3:3698839-3701493 FORWARD LENGTH=1970
Length=1970
Score = 1112 bits (602), Expect = 0.0
Identities = 1091/1320 (83%), Gaps = 62/1320 (5%)
Strand=Plus/Plus
Query 196 GGGTCAGGTCAGATCAACTCCAACTCTGTCCTCGTAGCTCTTCTTGACTCTCGTTACACT 255
||||| ||||| || ||||| ||||| |||||||||||||| || || ||||||||||||
Sbjct 256 GGGTCGGGTCAAATAAACTCAAACTCCGTCCTCGTAGCTCTCCTCGATTCTCGTTACACT 315
Query 256 GAGCTAGCTGAGCTCGTCGAGAAAGCTCTTCTCCTCCAGACACTTGAAGACGCTGTTGGT 315
|| || || ||||| || ||||| |||||||| ||||| || || |||||||| ||||||
Sbjct 316 GAACTCGCCGAGCTAGTTGAGAAGGCTCTTCTTCTCCAAACCCTCGAAGACGCCGTTGGT 375
Query 316 CGTCACAATATTACCATTTTTGCCCCTCGCAATGAAGCTCTTGAACGTGACCTTGACCCT 375
|||||||||||||| ||||| ||||| ||||||||||| || || ||||||||||||||
Sbjct 376 CGTCACAATATTACTATTTTCGCCCCACGCAATGAAGCACTCGAGCGTGACCTTGACCCG 435
Query 376 GAGTTCAAGA-GGTTCTTGCTCGAGCCAGGTAATCTCAAATCTCTCCAAACACTCCTAAT 434
|| || || | ||||||||||| | |||||||| ||||||||||||||||| || || |
Sbjct 436 GATTTTAA-ACGGTTCTTGCTCCAACCAGGTAACCTCAAATCTCTCCAAACGCTTCTCTT 494
Query 435 GTTC-CACATTATACCCAATCGGGTCGGGTTGGACCAATGGCCTCCAGAAGAA-TCGGGT 492
| || |||||||| ||||| || ||||||| ||||||||||| || |||| ||||||
Sbjct 495 G-TCTCACATTATCCCCAAACGAGTCGGGTCAAACCAATGGCCT-GAGGAGAATTCGGGT 552
Query 493 CGGGTCAAGCACCACACGCTAGGGAACGATC-AG-G-TCCATTTGAG------CAATGG- 542
|||||||| ||| |||| ||||| | || | || | | |||||||| ||| ||
Sbjct 553 CGGGTCAAACACGTCACGTTAGGGCATGACCAAGTGCTGCATTTGAGTAAACTCAAAGGA 612
Query 543 A-GAA-GGAAAAAAGA-TGGTTG-A-TCTAGCTG-AGATTATCCGACCCGATGATTTGAC 596
| || || ||| ||| ||| || | || |||| | |||| ||||||||||||||| ||
Sbjct 613 ACAAATGG-AAAGAGATTGG-TGAATTC-CGCTGTA-ATTACCCGACCCGATGATTTAAC 668
Query 597 CCGACCCGACGGATTGATCCACGGGATCGAACGGCTTCTCATTCCTCGCTCCGTTCAAGA 656
|||||||||||| ||||||||||| |||||||||||| | || ||||| |||||||||||
Sbjct 669 CCGACCCGACGGGTTGATCCACGGAATCGAACGGCTTTTAATCCCTCGTTCCGTTCAAGA 728
Query 657 AGATTTCAATCGTCGTCGTAGCCTCCAG-TCAATCACCGCCGTTTTACCCGAAGGAGCTC 715
||||||||| || || | | |||| | |||||| ||||||| ||||||||||||||||
Sbjct 729 AGATTTCAACCGACGGAGAAATCTCC-GATCAATCTCCGCCGTATTACCCGAAGGAGCTC 787
Query 716 CTGAAGTTGACCCGAGAACCAACCGTCTTAAGAAACCTG-CA--G-C-TC-CAGTCCCCG 769
| ||| | |||||||||||||||||||| |||||| ||| || | | || |||| ||||
Sbjct 788 CGGAAATCGACCCGAGAACCAACCGTCTCAAGAAATCTGCCACCGCCGTCTCAGTACCCG 847
Query 770 CCGGATCTCCACCGGCT-CTTCCGATCCAATCCGCCATGGCTCCTGGTCCATCGCTAGCT 828
||||||||||||| | | |||||||| ||||||| |||||||| |||||||||||||||
Sbjct 848 CCGGATCTCCACCAG-TGCTTCCGATTGAATCCGCTATGGCTCCAGGTCCATCGCTAGCT 906
Query 829 CCGGCACCAGCTCCGGGACCTGGA-G-GCAAGCAGC-ACCACTTCGACGGTGAAGCTCAA 885
||||| || ||||| ||||||||| | || | || | | || ||| |||| || |||||
Sbjct 907 CCGGCTCCGGCTCCAGGACCTGGAGGTGC-A-CA-CAAACATTTCAACGGCGATGCTCAG 963
Query 886 GTCAAAGATTTCATCCACACACTGTTACATTACGGCGGTTACAACGAGATGGCGGACATT 945
||||||||||||||||||||| ||||||||||||| || |||||||| |||||||| |||
Sbjct 964 GTCAAAGATTTCATCCACACATTGTTACATTACGGTGGATACAACGAAATGGCGGATATT 1023
Query 946 CTCGTGAATCTGACGTCACTCGCGACGGAGATGGGTCGCTTGGTGTCAGAAGGCTATGTG 1005
|||||||||||||||||||| ||||||||||||||||| |||||||||||||| || ||
Sbjct 1024 CTCGTGAATCTGACGTCACTTGCGACGGAGATGGGTCGATTGGTGTCAGAAGGTTACGTC 1083
Query 1006 TTGACGGTTCTT-GCTCCTAACGACGACGCTATGGCGAAACTGACGACGGATCAG-TTGA 1063
| || | | || ||||| ||||| || ||||||| |||| | ||||| |||||| || |
Sbjct 1084 CTCACCG-TGTTAGCTCCGAACGATGAAGCTATGGGGAAATTAACGACTGATCAGCTT-A 1141
Query 1064 GTGAGCCAGGAGCACCGGAGCAGATTGTGTATTACCATATTATCCCTGAGTATCAAACGG 1123
| ||||| ||||| |||||||| ||| |||||||||| ||||| || |||||||| ||||
Sbjct 1142 GCGAGCCCGGAGCTCCGGAGCAAATTATGTATTACCACATTATTCCAGAGTATCAGACGG 1201
Query 1124 AGGAGAGTATGTACAATTCTGTTAGGAGATTTGGGAAGGTGAAGTTTGATACGCTGCGCT 1183
|||| || ||||| ||||||||||||||||||||||||||||||| ||| |||||||| |
Sbjct 1202 AGGAAAGCATGTATAATTCTGTTAGGAGATTTGGGAAGGTGAAGTATGAAACGCTGCGTT 1261
Query 1184 TTCCTCATAAGGTTGCGGCTAAGGAAGCTGACGGTTCGGTTAAGTTTGGTGAC-GGTGAA 1242
||||||| ||||||| |||||| |||||||| || |||||||| || ||| | |||||
Sbjct 1262 TTCCTCACAAGGTTGGGGCTAAAGAAGCTGATGGCTCGGTTAAATTCGGTT-CTGGTGAC 1320
Query 1243 AAGTCAGCGTATTTGTTCGATCCTGATATTTATACCGATGGTCGAATTTCGGTTCAAGGG 1302
||| || |||||||| ||||| |||||||| ||||||||||| ||||||||||| |||
Sbjct 1321 CGGTCGGCTTATTTGTTTGATCCGGATATTTACACCGATGGTCGCATTTCGGTTCAGGGG 1380
Query 1303 ATTGATGGTGTTTTGTTCCCTCAAGAGGAGGA-GATTGTTGAATCGGTTAAGAAACCG-- 1359
|||||||||||||||||||| | ||| |||| || | || ||||||||||||||
Sbjct 1381 ATTGATGGTGTTTTGTTCCCAGAGGAGAAGGAAGAA-GA-GA--CGGTTAAGAAACCGAC 1436
Query 1360 -G-T----T-AAGAAAGTTGTTCAGCCGAGAAGAGGGAAATTGTTGGAAGTAGCCTGTAG 1412
| | | ||||||||||||||||||||||||||||| ||| |||||||||| |||||
Sbjct 1437 CGGTCCGGTTAAGAAAGTTGTTCAGCCGAGAAGAGGGAAGTTGCTGGAAGTAGCATGTAG 1496
Query 1413 CATGCTTGGTGCTTTTGGCAAGGAAACTTATCTCAGCAAATGCCGGTGAATTCGCAAACC 1472
|||||||| ||| |||| ||||| | ||||| |||| |||| | ||||||| ||||||
Sbjct 1497 TATGCTTGGAGCTATTGGGAAGGACTCATATCTAAGCAGATGCTGATGAATTCACAAACC 1556
> AT3G52370.1 | Symbols: FLA15 | FASCICLIN-like arabinogalactan
protein 15 precursor | chr3:19417490-19419782 FORWARD LENGTH=1603
Length=1603
Score = 505 bits (273), Expect = 8e-142
Identities = 595/751 (79%), Gaps = 20/751 (3%)
Strand=Plus/Plus
Query 582 ACCCGATGATTTGACCCGACCCGACGGATTGATCCACGGGATCGAACGGCTTCTCATTCC 641
|||||||||||| || || ||||| ||| | |||||||| |||||||| ||| | || ||
Sbjct 500 ACCCGATGATTTAACTCGTCCCGATGGAATCATCCACGGAATCGAACGTCTTTTAATCCC 559
Query 642 TCGCTCCGTTCAAGAAGATTTCAATCGTCGTCGTAGCCTCCAG-TCAATCACCGCCGTTT 700
|| || ||||||||||||||||| || |||||||| |||| | |||||| | ||||| |
Sbjct 560 ACGTTCTGTTCAAGAAGATTTCAACCGCCGTCGTAGTCTCC-GTTCAATCGCTGCCGTAT 618
Query 701 TACCCGAAGGAGCTCCTGAAGTTGACCCGAGAAC-CAACCGTCTTAAGAAACCTG-CAGC 758
|||| |||||||| || || ||||| || ||||| | ||||||| |||||| | ||||
Sbjct 619 TACCGGAAGGAGCACCGGAGGTTGATCCAAGAACTC-ACCGTCTCAAGAAA-AAGCCAGC 676
Query 759 TCCAGTCCCCGCCGGATCTCCACCGGCTCTTCCGATCCAATCCGCCATGGCTCCTGGTCC 818
||| | ||||||||| ||||||||| ||||||| | | ||| ||| | ||||||||
Sbjct 677 ACCAATTCCCGCCGGAGCTCCACCGGTTCTTCCGGTTTACGACGCAATGTCACCTGGTCC 736
Query 819 ATCGCTAGCTCCGGCACCAGCTCCGGGACCTGG-AGG-CAAGCAGCACCACTTCGACGGT 876
|| ||||||||||| || || || ||||| || || || || ||||| ||| ||||
Sbjct 737 GTCACTAGCTCCGGCTCCGGCACCAGGACCGGGTGGGCCACGC--CACCATTTCAACGGA 794
Query 877 GAAGCTCAAGTCAAAGATTTCATCCACACAC-TGTTACATTACGGCGGTTACAACGAGAT 935
|| |||||||| |||||||| |||||||| | | || |||||||| || ||||| || ||
Sbjct 795 GAGGCTCAAGTTAAAGATTTTATCCACACGCTTCTT-CATTACGGTGGCTACAATGAAAT 853
Query 936 GGCGGACATTCTCGTGAATCTGACGTCACTCGCGACGGAGATGGGTC-GCTTGGTGTCAG 994
||| || |||||||| ||||| || || | || || |||||||||| || | ||||| |
Sbjct 854 GGCAGATATTCTCGTTAATCTCACTTCTTTAGCCACCGAGATGGGTCGGC-TCGTGTCGG 912
Query 995 AAGGCTATGTGTTGACGGTTCTT-GCTCCTAACGACGACGCTATGGCGAAACTGACGACG 1053
|||| || || || || ||| || || || |||||||| |||||||| ||| |||| |||
Sbjct 913 AAGGTTACGTTTTAACCGTT-TTAGCACCAAACGACGAAGCTATGGCTAAATTGACCACG 971
Query 1054 GATCAGTTGAGTGAGCCAGGAGCACCGGAGCAGATTGTGTATTACCATATTATCCCTGAG 1113
|| || ||||| || || ||||| || ||||| ||| ||||||| || || || || ||
Sbjct 972 GACCAATTGAGCGAACCGGGAGCTCCAGAGCAAATTATGTATTATCACATCATACCGGAA 1031
Query 1114 TATCAAACGGAGGAGAGTATGTACAATTCTGTTA-GGAGATTTGGGAAGGTGAAGTTTGA 1172
|| ||||| || ||||||||||||||||||| || | | |||||||| | || ||
Sbjct 1032 TACCAAACCGAAGAGAGTATGTACAATTCTG-TACGCCGGTTTGGGAAAATCCGGTACGA 1090
Query 1173 TACGCTGCGCTTTCCTCATAAGGTTGCGGCTAAGGAAGCTGACGGTTCGGTTAAGTTTGG 1232
| | || || ||||||||||| || | |||| |||| || || |||||||||||||| ||
Sbjct 1091 TTCACTCCGGTTTCCTCATAAAGTAGAGGCTCAGGAGGCAGATGGTTCGGTTAAGTTCGG 1150
Query 1233 TGACGGTGAAAAG-TCAGCGTATTTGTTCGATCCTGATATTTATACCGATGGTCGAATTT 1291
| | |||| | | || || |||||||||||||||||||||||||||||||| || ||||
Sbjct 1151 TCATGGTG-ATGGTTCGGCTTATTTGTTCGATCCTGATATTTATACCGATGGACGGATTT 1209
Query 1292 CGGTTCAAGGGATTGATGGTGTTTTGTTCCC 1322
|||||||||||||||| ||||||||||||||
Sbjct 1210 CGGTTCAAGGGATTGACGGTGTTTTGTTCCC 1240
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95130032775
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5