BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487466
Length=2219
Score E
Sequences producing significant alignments: (Bits) Value
AT5G06560.1 | Symbols: | Protein of unknown function, DUF593 |... 3011 0.0
AT3G11850.1 | Symbols: | Protein of unknown function, DUF593 |... 747 0.0
AT2G26000.2 | Symbols: BRIZ2 | zinc finger (C3HC4-type RING fin... 91.6 3e-17
> AT5G06560.1 | Symbols: | Protein of unknown function, DUF593
| chr5:2003304-2006188 REVERSE LENGTH=2465
Length=2465
Score = 3011 bits (1630), Expect = 0.0
Identities = 2019/2192 (92%), Gaps = 85/2192 (4%)
Strand=Plus/Plus
Query 72 ttttttcttttttatttctctttttgcttttgcttttcgtttA-C--------C----AG 118
||||||| ||||| ||||||||||| ||||||||||||||||| | | ||
Sbjct 214 TTTTTTC-TTTTTCTTTCTCTTTTTTCTTTTGCTTTTCGTTTACCAGAAAAAGCGATAAG 272
Query 119 A-AAAAATTATAGGTGGGTCTGTTATTTTCCCGGAAGTTATCATTGAGAATTCAATAAGA 177
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 273 AGAAAAATTATAGGTGGGTCTGTTATTTTCCCGGAAGTTATCATTGAG-ATTCAATAAGA 331
Query 178 GAAGGAGATATCATTAGCTTTCCTGGAAAAATTCAGACTTTTGGGTTTAGTTTTCGTGTT 237
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 332 GAAGGAGATATCATTAGCTTTCCTGGAAAAATTC-GACTTTTGGGTTTAGTTTTCGTGTT 390
Query 238 CTTGGTGGTTCAACGGTAAAGGAG--CTATATTGGCGCTAGTTTTCGCTTTC--GGATCT 293
||||||||||||||||| |||||| ||||||||||||||||||| ||| || ||||||
Sbjct 391 CTTGGTGGTTCAACGGTGAAGGAGCTCTATATTGGCGCTAGTTTTGGCTATCGTGGATCT 450
Query 294 GGACTACGGAGATAGGTTTTGGTGATTGTTACTATGTATTTGTGCCATAGCCTGGGATTG 353
||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||
Sbjct 451 AGACTACGGAGATAGGTTTTGGTGATTGTTGCTATGTATTTGTGCCATAGTCTGTGATTG 510
Query 354 CGAATTT-GATACTGTTTCAAGTTATGGATTTGGCAGTTGTATCGT-CCC--GTAGGGAT 409
|||||| ||||||||| |||||||||||||||||| ||||||| | ||| |||||||
Sbjct 511 TGAATTTGGATACTGTTACAAGTTATGGATTTGGCAATTGTATCTTCCCCTACTAGGGAT 570
Query 410 GTGGTTAGATGTTGTGATTGTGGATGTAG-TTGCTCTCTGAATGATGCTTCTCCGGGTTC 468
||||||||||||||||||||||||||| | |||||||||||||| ||||||||| |||||
Sbjct 571 GTGGTTAGATGTTGTGATTGTGGATGT-GATTGCTCTCTGAATGGTGCTTCTCCTGGTTC 629
Query 469 TTTGCTTCGGTCTGTGAAGAGAAAGTACGAGGAATTTGAGAATGAGAAACCATTTCACAT 528
|||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 630 TTTGCTTCGGTCTGTGAAGAGAAAATACGAGGAATTTGAGAATGAGAAACTGTTTCACAT 689
Query 529 ACCGGAGCTGGAGCTGGACTTGTCTTCCAATGCTAAAGTCCAAATTGAGAATGAATTGGA 588
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 690 ACCGGAGCTGGAGCTGGACTTGTCTTCCAATGCTAAAGTTCAAATTGAGAATGAATTGGA 749
Query 589 GCTGCTTAGGGAGACTGTTAGCAGCCAACAGCAGTCGATTCAAGATTTGTATGAGGAGCT 648
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 750 GCTGCTTAGGGAGACTGTTAGCAGTCAACAGCAGTCGATTCAAGATTTGTATGAGGAGCT 809
Query 649 TGACGAAGAGCGGAATGCTGCATCGACAGCTGCAAGTGAGGCAATGTCTATGATATTGAG 708
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 810 TGATGAAGAGCGGAATGCTGCTTCGACAGCTGCAAGTGAGGCAATGTCTATGATATTGAG 869
Query 709 GTTGCAGAGGGAGAAAGCTGAACTCCAGATGGAATTGAGACAGTTTAAGCGGTTTGCTGA 768
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 870 GTTGCAGAGGGATAAAGCTGAACTCCAAATGGAATTGAGACAGTTTAAGCGGTTTGCTGA 929
Query 769 GGAGAAAATGGAGCATGATCAGCAAGAGCTTTTGGATCTGGAAGATTTGATATATAAGAG 828
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 930 GGAGAAAATGGAGCATGATCAACAAGAGCTTTTGGATCTGGAAGATTTGATATATAAGAG 989
Query 829 GGAGCAGACAATTCAGGCTTTGACATATGAAGCTCAGGCTTATAAGCATAGAATGATGAG 888
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 990 GGAGCAGACTATTCAGGCTTTGACATTTGAAGCTCAGGCTTATAAGCATAGAATGATGAG 1049
Query 889 TTTTGGGCTCACTGAGGAC-GAGGTTGAAATGGAGAAGAACATGCTTAGCCGTAACCCGA 947
||||||| ||||||||| | |||||||||| |||||||||||||||||||||||| ||||
Sbjct 1050 TTTTGGGTTCACTGAGG-CTGAGGTTGAAACGGAGAAGAACATGCTTAGCCGTAATCCGA 1108
Query 948 GCATGATCGACAATGATTACCAATATGATCTCCCTACATCTGATTACCCTCCTATAAAGT 1007
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1109 GCATGATCGAAAATGATTACCAATATGATCTCCCCACATCTGATTACCCTCCTATAAAGT 1168
Query 1008 GCAATGTGAATGAAAACCCAGGTCCCCTGGAGGCTGATATTGATGTTGATGATGTTGAAA 1067
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1169 GCAATGTGAATGAGAACCCAGGTCCCCTGGAGGCTGATATTGATGTTGATGATGTTGAAA 1228
Query 1068 AGTATCCATTGGCTGATTCACCTCATGGCCGGGATAATTTGAAGACTTTGGAACGACGGA 1127
|||| |||||||||||||||||||| || || | |||||||||||||||| |||
Sbjct 1229 AGTACCCATTGGCTGATTCACCTCAC--CC---AT--T--GAAGACTTTGGAACGAAGGA 1279
Query 1128 TAAGTCAGATGGAGAGAAATCCTAGCTTTACTCAGTCTACTGGTGATGTATCCGGAGGGA 1187
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct 1280 TAAGTCAGATGGAGAGAAATCCTAGCTTTACTCAGCCTACTGGTGATGTATCTGGAGGGA 1339
Query 1188 GATATTATACGGAGAAGATGGTGGTTGGTCAGAGTCCTAGGCAGCAGAGACACTTCAGGA 1247
|| ||||||| ||||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct 1340 GACATTATACAGAGAAGAACGTGGTTGGTCAGAGTCCTAGGCATCAGAGACATTTCAGGA 1399
Query 1248 GGGTTTCCACTGGTAGTTCAAGTTCACTTTTGGGAACAACTAGGGAACAAAGGCCTGACT 1307
||||||||||||||||| ||||||||||||||||||||||||| ||| |||||| ||| |
Sbjct 1400 GGGTTTCCACTGGTAGTGCAAGTTCACTTTTGGGAACAACTAGAGAAAAAAGGCTTGATT 1459
Query 1308 TTTCCAATGATTCCCCAAGGTCCAACAATGGTAGCTTCAAGAAAATGGAAGATCCCTCAT 1367
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 1460 TTTCTAATGATTCCCCAAGGTCCAACAATGGTAGCTTCAGGAAAATGGAAGATCCCCCAT 1519
Query 1368 ATGCAGCTGGTAATTCCTTTGCAAAGGATAAGGGTGACTCATCGGAAATAGGAGATAATG 1427
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1520 ATGCAGCTGGTAATTCCTTTGCAAGGGATAAGGGTGACTCATCGGAAATAGGAGATAATG 1579
Query 1428 ACATGAATGATAGAGTTTATACCATTGACTCTGTCCGTCACGGCGTATCTCATAGTGGTG 1487
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||
Sbjct 1580 ACATGAATGATAGAGTTTATACCATTGACTCTGTCCATCACAGTGTATCTCATAGTGGTA 1639
Query 1488 CTGCTGAGCAGAAGTTTAAGAATGACACTGCTGATGGTTATGCGATGTCTCCGAGAGAAA 1547
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1640 CTGCTGAGCAAAAGTTTAAGAATGACACTGCTGATGGTTATGCAATGTCTCCGAGAGAAA 1699
Query 1548 TATCGAATCAACCGGATCTGGGTGATCCTGATATATCAAAACTCTACATGAGACTTCAAG 1607
|||||||||| |||||||| ||||||||||| ||||| ||||| ||||||||||||||||
Sbjct 1700 TATCGAATCAGCCGGATCTTGGTGATCCTGAAATATCGAAACTTTACATGAGACTTCAAG 1759
Query 1608 CACTAGAAGCTGACAGGGAATCAATGAGACAGGCGATTATGTCGATGAGGACTGAGAAAG 1667
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1760 CACTAGAGGCTGACAGGGAATCAATGAGACAGGCGATTATGTCGATGAGGACTGAGAAAG 1819
Query 1668 CACAGATGGTTCTGTTGAAAGAAATTGCCCAACATCTGTCAAAGGATGTTATCCCAGAAC 1727
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1820 CACAGATGGTTCTGTTGAAAGAAATTGCCCAACATCTGTCAAAGGATGTTGTCCCAGAAC 1879
Query 1728 GTAGATTGCCACTGCGGAAAGCATCTATTGTTGGAGCATTCAATTTCATATCTGTCTTTA 1787
|||||||||| ||||||||| |||||||| ||||||||||||| ||||||||||||||||
Sbjct 1880 GTAGATTGCCTCTGCGGAAAACATCTATTATTGGAGCATTCAACTTCATATCTGTCTTTA 1939
Query 1788 AGTGGATCACATCTTTTGTTTTCTGGAGAAAAAAGGCTCGTCGAAGCAAATACATGAACG 1847
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1940 AGTGGATCACATCTTTTGTTTTCTGGAGAAGAAAGGCTCGTCGAAGCAAATACATGAACG 1999
Query 1848 GGGTGCAAGGGAACAACATGGGATTGCAAATGCTTCTAGAAAAGACTCCTCGGATACGGC 1907
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2000 GGGTACAAGGGAACAACATGGGATTGCAAATGCTTCTAGAAAAGACTCCTCGAATACGGC 2059
Query 1908 AATGGAGATGTCTATCAAGCACACAAGTGTGAAATTTGGTTTGAAGGGCATAATGTGAAT 1967
||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 2060 AATGGAGATGTCTCTCAAGCACACAAGTGTGAAATTTGGTTTGCAGCGCATAATGTGAAT 2119
Query 1968 TACTTTGTGAAAAGTAGGTA-TTTC-C-ATCTCATTCATGGTTTT-ACTGAGGAAAATGG 2023
|||||||||||| ||| || |||| | |||| | ||||||||| |||||| ||||||
Sbjct 2120 TACTTTGTGAAA-GTACTTACTTTCTCCATCT--T-CATGGTTTTTACTGAGAAAAATGA 2175
Query 2024 ttttt-t-t--t-t----ttttt--CTTTCCTT-CTAG-T--ATTTGCCATATTTCATTT 2068
||||| | | | | ||||| ||||| || || | | ||||||||||| ||||||
Sbjct 2176 TTTTTCTCTAATGTGCAGTTTTTATCTTTCTTTGCTTGGTGTATTTGCCATATGTCATTT 2235
Query 2069 GTTGTGGTTGTGGGGTTGGAATGGCTTGAATGGGGTTTGATGATT-GTCTAAAGAGATGG 2127
||||| | | || ||||||||| | | |||||||||| |||| | | ||
Sbjct 2236 GTTGT--T-G-GG--TTGGAATGG---G---G---TTTGATGATTTGTCTC--G-G-TG- 2275
Query 2128 GTGAGGCTACACGAAAAGCACGTCTTGTTCTTTCTATTGTAAGCTGTGTATAATGTTTCC 2187
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2276 ---AGGCTACACTAAAAGCACGTCTTGTTCTTTCTATTGTAAGCTGTGTATAATGTTTCC 2332
Query 2188 AGATTCTTGTTTGAGTTTCTCTGGAAAGAAAA 2219
|||||||| ||||| |||||||||||||||||
Sbjct 2333 AGATTCTTCTTTGAATTTCTCTGGAAAGAAAA 2364
> AT3G11850.1 | Symbols: | Protein of unknown function, DUF593
| chr3:3738897-3741403 REVERSE LENGTH=1976
Length=1976
Score = 747 bits (404), Expect = 0.0
Identities = 1183/1538 (77%), Gaps = 138/1538 (9%)
Strand=Plus/Plus
Query 464 GGTTCTTTGCTTCGGTCTGTGAAG-AGA-AAG-TACGAGGAATTTGAGAATGAGAAACCA 520
||||| | | |||| ||||||||| ||| ||| |||| ||||| ||| ||||||| |
Sbjct 194 GGTTCATGGATTCGATCTGTGAAGAAGAGAAGACACGACGAATTACAGACCGAGAAACGA 253
Query 521 TTTCAC-ATACCGGAGCTGGA-G--CTGGACTTG-TCTTCCAATGCTAAAGTCCAAATTG 575
||| | |||||||||||||| | || ||| || || || ||| ||| |||||||||||
Sbjct 254 -TTCTCGATACCGGAGCTGGACGACCTAGACATGTTC-TCTAATCCTAGAGTCCAAATTG 311
Query 576 AGAATGAATTG-GAGCTGCTTA-GGGAGACTGTTAGCAGCCAACAGCAGTCGATTCAAGA 633
|||| ||| || || | | || | ||||||||||||| |||||||| ||||||| ||
Sbjct 312 AGAACGAA-TGTGAATTAC-TACGCGAGACTGTTAGCAATCAACAGCAAACGATTCAGGA 369
Query 634 TTTGTATGAGGAGCTTGACG-AAGAGCGGAATGCTGCATCGACAGCTGCAAG-TGAGGCA 691
||||||| | |||||||| | ||||||| | |||| |||| || ||||| || ||| |
Sbjct 370 TTTGTATCATGAGCTTGA-GCAAGAGCGTATTGCTTCATCAACTGCTGC-AGATGAAAC- 426
Query 692 ATGTCTATGAT-ATT--GAGGTTGCAGAGGGAGAAAGCTGAACTCCAGATGGAATTGAGA 748
| || | ||| ||| || |||| || | || ||||| || || | ||||| ||| |
Sbjct 427 A-GT-AAAGATGATTCAGACGTTGGAGCGTGAAAAAGCAAAAATCGACTTGGAACTGAAA 484
Query 749 CAGTTTAAGCGGT-TTGCTGAGGAGAA-AATGGAGCATGATCAGCAAGAGCTTTTGG-AT 805
||| || ||| || || ||| || || | || | |||| | |||||| || || ||
Sbjct 485 CAGCTTCAGC-GTAGTGTTGACGA-AACATTGAATTATGAAAACCAAGAGATTGAGGCAT 542
Query 806 CTGGAAGATTTGATATAT-AAGAGGGAGCAGACAATTCAGGCT-TTGACATATGAAGCTC 863
||||| || || | ||| || ||||| ||||| ||||||||| || || | |||| |||
Sbjct 543 -TGGAAAATATGGTTTATCAA-AGGGATCAGACGATTCAGGCTCTT-ACGTTTGAAACTC 599
Query 864 AGGCTTATAAGCATAGAATGATGAGTTTTGGGCTCACTG-AGGACGAGGTTGAAAT-G-G 920
||||||||||||| |||||||||||||||||||| || | || | || | || || | |
Sbjct 600 AGGCTTATAAGCACAGAATGATGAGTTTTGGGCTAACCGAAGCA-GAAGCTG--ATGGTG 656
Query 921 AGAAGAACATGCTTAGCCGTAACCCGAGCATGATCGACAATGA-TTAC-CAATATGATCT 978
||| || | ||||||| ||||||||||||||||||||| | | || | ||||||| ||
Sbjct 657 AGAGGAGCTTGCTTAGTCGTAACCCGAGCATGATCGAC-TTTAGTT-CTGAATATGA-CT 713
Query 979 -CCCTACATC-TGATTACCCTCCT-ATAAAGTGCAATGTGAATGAAAACCCAGGTCCC-C 1034
||||||| | |||||||||||| |||| |||||| | ||||| || ||| | ||| |
Sbjct 714 GCCCTACA-CAAGATTACCCTCCTCTTAAA-TGCAATATTAATGAGAA-CCAAGACCCTC 770
Query 1035 TGGAGGCTGATAT-TGATGTTG-ATGATGTTGAAAAGTATCCATTGGCTGATTCACCTCA 1092
| ||||||||||| | |||||| | |||| ||| || |||||| |||||||| |||||
Sbjct 771 TTGAGGCTGATATCT-ATGTTGCA-GATGATGAGAACTATCCACCAGCTGATTCTCCTCA 828
Query 1093 TGGCCGGGA-TA-ATTTGAAGACTTTGGAACGACGGA-TAAGTCAGATGGAGA-GAAATC 1148
||| | || || |||| ||||||||||| ||| || | || |||||||||| | ||||
Sbjct 829 TGG--GAGAGTACATTTAAAGACTTTGGATCGA-AGACTCAGCCAGATGGAGACG-AATC 884
Query 1149 CTAGCTTTACTCAGTCTACTGGTGATGTATCCGGAGGGAGATATTATACGGAGAAGATGG 1208
|||||||||||||| | ||| || ||| || ||| || | | |||||| ||
Sbjct 885 CTAGCTTTACTCAG-----T--TGA-ATAGAGGGA-GG-GATGTT-T-CAGAGAAG-GGG 931
Query 1209 -TGGTTGGTCAGAGTCCTAGGCAG-CAGAGACACTTCAGGAGGGTTT--CC-ACTGGTAG 1263
|||||||| |||||||||||| | || ||||| || |||||| ||| || ||||||
Sbjct 932 ATGGTTGGTGAGAGTCCTAGGC-GTCAAAGACATTTTAGGAGGATTTCCCCTACTGGTTC 990
Query 1264 TTCAAGTTCACTTTTGGGAACAACTAGGGAACAAAGGCCTGACT-TTTCCAATGATTCCC 1322
|||||||||| |||||| || ||| |||| ||| ||||| | ||| ||||||||
Sbjct 991 ATCAAGTTCACACTTGGGAGCATCTAAAGAACTAAGACCTGA-TGTTTTTGTTGATTCCC 1049
Query 1323 CAAGGTCCAACAATGGT--AGCTTC-AAGAAAATGGAAGATCCCTCATATGCAGCTGGTA 1379
| |||||| ||| | | ||| || ||||||||||||||| ||| ||| ||| | |
Sbjct 1050 CGAGGTCC--CAAAGCTACAGC-TCTAAGAAAATGGAAGATGTCTCGTATACAG--AG-A 1103
Query 1380 ATTCCTTTGCAAAGGATAAGGGTGACTCATCGGAAATAGGAGATAATGACATGAATGATA 1439
| | | || | ||| | ||||| ||||||||||||| ||||||||| |||||
Sbjct 1104 A-T--AAT---AATGCTAAAGATGACTTGTCGGAAATAGGAG---ATGACATGAGTGATA 1154
Query 1440 GAGTTTATACCATTGACTCTGTCCGTCACGGC-GTAT--CTCATAGT---GGTGCT-GCT 1492
|||||||||||||||| ||||| | |||| || || | |||||||| |||| | ||
Sbjct 1155 GAGTTTATACCATTGATTCTGTTCATCACAGCAGTGTGGCTCATAGTGGCGGTG-TAGCG 1213
Query 1493 GAGCAGAAGTTTAAGAATGACACTGCTGATGGTTATG-CGATGTCTCCGAGAGAAATATC 1551
||||||||| || || ||| || ||||||| ||| | | || ||||||| | | |
Sbjct 1214 GAGCAGAAGATTGAGGATGGTGCTTCTGATGGCAATGTTGTTTTC-CCGAGAG--A-A-C 1268
Query 1552 GAATCAACCGGATCTGGGTGATCCTGATATATCAAAACTCTACATGAGACTTCAAGCACT 1611
| | | ||||||| ||||||||||||||| | |||||||||||||| |||||||||||
Sbjct 1269 --A-C-A-CGGATCTTGGTGATCCTGATATAACGAAACTCTACATGAGGCTTCAAGCACT 1323
Query 1612 AGAAGCTGACAGGGAATCAATGAGACAGGCGATTATGTCGATGAGGACTGAGAAA-GCAC 1670
|| ||||||||||||||||||| ||| ||| || | || ||||||||||| ||| || |
Sbjct 1324 GGAGGCTGACAGGGAATCAATGAAACATGCGCTTCTCTCTATGAGGACTGA-AAAGGCTC 1382
Query 1671 AGATGGTTCTGTTGAAAGAAATTGCCCAACATC-TGTCAAAGGATGTTATCCCAGAACGT 1729
| ||||| ||||||||||||||||| ||||| | |||||||||| ||| |||| ||||
Sbjct 1383 AAATGGTACTGTTGAAAGAAATTGCTCAACA-CTTGTCAAAGGAAGTTGTCCCTCAACGG 1441
Query 1730 AGATTGCCACTGCGGAAAGCATCTATTGTTGGAG-CATTCAATTTCATATCTGTCTTTAA 1788
|||||||| || || ||||||||||||| ||| | |||| | ||| | | ||||||||
Sbjct 1442 AGATTGCCTCTACGTAAAGCATCTATTGCTGG-GCCATTGACTTTTACGCCGGTCTTTAA 1500
Query 1789 GTGGATCACATCTTTTGTTTTCTGGAGAAA-AAAGGCTCGTCGAAGCAAATACATGAACG 1847
|||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| | |
Sbjct 1501 GTGGATCACATCTTTTGTTTCCTGGA-AAAGAAAGGCTCGTCGAAGCAAATACATGTATG 1559
Query 1848 GGGTG-CAAGGGAACAACATGGGATTGCAAATGCTTCTAGAAAAGACTCC-TCGGAT-AC 1904
|| || || || |||||||| || |||||||||||||||||||| | ||| |||| | |
Sbjct 1560 GGATGTCA-GGAAACAACATCGGCTTGCAAATGCTTCTAGAAAA-AGTCCCTCGG-TCAA 1616
Query 1905 GGCAATGGAGATGTCT-ATCAAGCACACAAGTGTGAAA 1941
|| ||||| ||||||| | | |||| |||||||||||
Sbjct 1617 GGAAATGGCGATGTCTTAGGA-GCACGCAAGTGTGAAA 1653
> AT2G26000.2 | Symbols: BRIZ2 | zinc finger (C3HC4-type RING finger)
family protein | chr2:11081302-11085350 FORWARD LENGTH=1746
Length=1746
Score = 91.6 bits (49), Expect = 3e-17
Identities = 56/59 (95%), Gaps = 2/59 (3%)
Strand=Plus/Plus
Query 1789 GTGGATCACATCTTTTGTTTTCTGGAGAAAAAAGGCTCGTCGAAGCAAATACA-TGAAC 1846
|||||||||||||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct 32 GTGGATCACATCTTTTGTTTTCTGGAGAAAAAAGGCTCGTCGAAGCAAGTA-AGTGAAC 89
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 110089795185
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5