BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487470
Length=3842
Score E
Sequences producing significant alignments: (Bits) Value
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |... 6312 0.0
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |... 3657 0.0
> AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12
| chr5:2019107-2027943 REVERSE LENGTH=3898
Length=3898
Score = 6312 bits (3418), Expect = 0.0
Identities = 3743/3892 (96%), Gaps = 53/3892 (1%)
Strand=Plus/Plus
Query 1 GATTGTATTTCTCCCT-AGAGTCACTTTGCCTCT-TCTTTGATTTTTCTCTGCATCGTCG 58
|||||||||||||||| ||||||||||||||| | ||||||||||||||||| |||||||
Sbjct 1 GATTGTATTTCTCCCTAAGAGTCACTTTGCCTTTGTCTTTGATTTTTCTCTGTATCGTCG 60
Query 59 GTCTCTCTTTTGCCTTTCTCGATCCCACCGTCAAATCCTTCTCCGGCCAATGACTATGAT 118
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 61 GTCTCTCTTTTGCGTTTCTCGATCCCACCGTCTAATCCTTCTCCGGCCAATGACTATGAT 120
Query 119 GACTCCGCCTCCCGTTGATCAGCCAGAAGATGAGGAGATGCTTGTGCCGAATTCAGATTT 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GACTCCGCCTCCCGTTGATCAGCCAGAAGATGAGGAGATGCTTGTGCCGAATTCAGATTT 180
Query 179 GGTCGACGGTCCTGCTCAGCCCATGGAAGTTACCCAACCCGAGACTGCTGCGAGTACTGT 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GGTCGACGGTCCTGCTCAGCCCATGGAAGTTACCCAACCCGAGACTGCTGCGAGTACTGT 240
Query 239 GGAGAACCAGCCAGCTGAGGATCCTCCTACTCTGAAATTCACGTGGACTATCCCTAATTT 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GGAGAACCAGCCAGCTGAGGATCCTCCTACTCTGAAATTCACGTGGACTATCCCTAATTT 300
Query 299 CTCTAGGCAAAACACCAGGAAGCATTACTCCGATGTATTTGTCGTTGGAGGTTACAAATG 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 CTCTAGGCAAAACACCAGGAAGCATTACTCCGATGTATTTGTCGTTGGAGGTTACAAATG 360
Query 359 GCGCATATTAATTTTCCCGAAAGGGAACAATGTTGATCATTTGTCCATGTACTTGGATGT 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GCGCATATTAATTTTCCCGAAAGGGAACAATGTTGATCATTTGTCCATGTACTTGGATGT 420
Query 419 TTCTGATGCTGCGAGTTTGCCGTACGGATGGAGCAGATATGCTCAGTTCAGTCTGGCTGT 478
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 421 TTCTGATGCTGCGAGTTTGCCGTACGGTTGGAGCAGATATGCTCAGTTCAGTCTGGCTGT 480
Query 479 AGTCAATCAAATCCACTCCAGATATACCATTAGAAAGGAGACGCAACATCAATTCAATGC 538
|||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 481 AGTCAATCAAATCCACACCAGATATACCGTTAGAAAAGAGACGCAACATCAATTCAATGC 540
Query 539 TAGAGAAAGCGATTGGGGATTTACATCATTCATGCCTCTAAGTGAACTTTATGATCCTAG 598
|||||||||||||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct 541 TAGAGAAAGCGATTGGGGATTTACATCATTCATGCCACTTAGCGAACTTTATGATCCTAG 600
Query 599 TAGAGGATATTTAGCGAATGATACTGTTTTGGTTGAAGCTGAAGTCGCTGTACGTAAGGT 658
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 TAGAGGATATTTAGTGAATGATACTGTTTTGGTTGAAGCTGAAGTCGCTGTACGTAAGGT 660
Query 659 TCTTGATTACTGGTCATATGACTCTAAAAAAGAGACTGGTTTTGTTGGACTCAAGAACCA 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TCTTGATTACTGGTCATATGACTCTAAAAAAGAGACTGGTTTTGTTGGACTCAAGAACCA 720
Query 719 AGGTGCAACTTGTTACATGAATTCTCTCCTACAGACACTATACCACATACCTTACTTCAG 778
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 AGGTGCAACATGCTACATGAATTCTCTCCTACAGACACTATACCACATACCTTACTTCAG 780
Query 779 AAAGGCTGTATACCACATGCCGACAACTGAGAACGATTTACCCACAGCAAGTATACCTTT 838
||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| ||
Sbjct 781 AAAGGCTGTATACCACATGCCAACAACTGAGAATGATGCACCCACAGCAAGTATACCGTT 840
Query 839 GGCTCTCCAAAGTTTGTTTTACAAGCTCCAATATAATGACACTAGTGTTGCAACAAAGGA 898
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 841 GGCTCTCCAAAGTTTGTTTTACAAGCTCCAATACAATGACACTAGTGTTGCAACAAAAGA 900
Query 899 GCTGACAAAGTCTTTTGGTTGGGATACATATGATTCCTTTATGCAACATGATGTGCAAGA 958
|||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 901 GCTGACAAAGTCGTTTGGTTGGGATACATATGATTCCTTCATGCAGCATGATGTGCAAGA 960
Query 959 ACTCAATCGGGTTCTCTGCGAAAAGCTTGAGGACAAAATGAAGGGAACTGTTGTGGAGGG 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 ACTCAATCGGGTTCTCTGCGAAAAGCTTGAGGACAAAATGAAGGGAACTGTTGTGGAGGG 1020
Query 1019 AACAATACAACAACTATTTGAGGGCCACCATATGAATTATATTGAGTGCATAAATGTAGA 1078
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1021 AACAATACAACAACTTTTTGAGGGCCACCATATGAATTACATTGAGTGCATAAATGTAGA 1080
Query 1079 TTTCAAATCGACACGGAAAGAATCATTTTACGACCTTCAGCTGGATGTGAAAGGCTGCAA 1138
||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1081 TTTTAAATCTACACGGAAAGAATCATTTTACGACCTTCAGCTGGATGTTAAAGGCTGCAA 1140
Query 1139 GGATGTTTATGCTTCTTTTGACAAGTATGTTGAAGTTGAACGTCTTGAAGGAGATAACAA 1198
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1141 GGATGTTTATGCTTCTTTTGACAAGTATGTTGAAGTTGAACGTCTTGAAGGAGACAACAA 1200
Query 1199 ATATCATGCAGAAGGACATGGTTTACAGGATGCaaaaaaaGGTGTTCTTTTCATTGACTT 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 ATATCATGCAGAAGGACATGGTTTACAGGATGCAAAAAAAGGTGTTCTTTTCATTGACTT 1260
Query 1259 TCCACCGGTTCTTCAACTCCAGCTCAAGAGGTTTGAATATGACTTTATGAGGGACACCAT 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 TCCACCGGTTCTTCAACTCCAGCTCAAGAGGTTTGAATATGACTTTATGAGGGACACCAT 1320
Query 1319 GGTAAAGATAAACGATCGGTATGAGTTTCCTCTTGAACTGGATCTTGATAGAGAAAATGG 1378
||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 1321 GGTGAAGATAAATGATCGGTATGAGTTTCCGCTTGAACTGGATCTTGATAGAGAAGATGG 1380
Query 1379 AAAGTATCTGTCTCCTGATGCTGACAGGAGTGTCCGCAACCTTTATACTCTTCACAGTGT 1438
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 AAAGTATCTGTCGCCTGATGCTGACAGGAGTGTCCGCAACCTTTATACTCTTCACAGTGT 1440
Query 1439 CTTAGTTCATAGTGGAGGAGTACATGGTGGGCACTATTACGCTTTTATAAGACCTACGCT 1498
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1441 TTTAGTTCATAGTGGAGGAGTACATGGTGGGCACTATTATGCTTTTATAAGGCCTACGCT 1500
Query 1499 CTCAGATCAGTGGTATAAATTTGATGATGAACGCGTAACAAAGGAAGATTTGAAAAGGGC 1558
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1501 CTCAGATCAGTGGTATAAATTTGATGATGAACGAGTAACCAAGGAAGATTTGAAAAGGGC 1560
Query 1559 ATTGGAGGAGCAATATGGTGGTGAAGAAGAGCTACCACAGACTAATCCTGGTTTCAATAA 1618
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1561 TTTGGAGGAGCAATATGGTGGTGAAGAAGAGCTACCACAGACTAATCCTGGTTTCAATAA 1620
Query 1619 ---CCCTCCTTTCAAATTCACAAAGTACTCGAATGCTTACATGCTTGTTTATATCCGGGA 1675
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1621 TAACCCTCCTTTCAAATTCACAAAGTACTCGAATGCTTACATGCTTGTATATATCCGAGA 1680
Query 1676 AAGTGACAAGGATAAAATAATCTGCAACGTTGATGAGAAAGACATAGCAGAACATTTAAG 1735
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1681 AAGTGACAAAGATAAAATAATCTGCAACGTTGATGAGAAAGACATAGCAGAACATTTAAG 1740
Query 1736 GGTGAGGCTaaagaaagagcaagaagaaaaggaagataaaagaagaTACAAGGCACAAGC 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1741 GGTGAGGCTAAAGAAAGAGCAAGAAGAAAAGGAAGATAAAAGAAGATACAAGGCACAAGC 1800
Query 1796 TCACCTATATACAATAATTAAGGTTGCAAGAGATGAAGATCTTAAGGAACAAATCGGGAA 1855
|||| ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1801 TCACTTATATACCATAATTAAGGTTGCAAGAGATGAAGACCTTAAGGAACAAATTGGGAA 1860
Query 1856 GGATATATATTTTGATCTTGTGGACCATGACAAAGTTCGCAGTTTCCGTATCCAGAAACA 1915
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1861 GGATATATATTTTGATCTTGTGGATCATGACAAAGTTCGCAGTTTCCGTATCCAGAAACA 1920
Query 1916 GACACCATTTCAACAGTTTAAGGAGGAGGTAGCCAAAGAATTTGGTGTACCTGTTCAGTT 1975
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1921 GACACCATTTCAACAGTTTAAGGAGGAGGTAGCAAAAGAATTTGGTGTACCTGTTCAGTT 1980
Query 1976 ACAGAGGTTCTGGATTTGGGCTAAGCGACAAAACCATACCTATCGTCCCAATCGCCCCCT 2035
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 1981 ACAGAGGTTCTGGATTTGGGCAAAGAGACAAAACCATACCTATCGTCCCAATCGCCCCCT 2040
Query 2036 TACGCCTCAAGAGGAATTACAACAGGTTGGACAAATAAGAGAAGCATCTAACAAGGCAAA 2095
||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||
Sbjct 2041 TACGCCTCAAGAGGAATTACAACCGGTTGGACAAATAAGGGAAGCATCTAATAAGGCAAA 2100
Query 2096 CACTGCAGAACTAAAGCTTTTCCTGGAAGTAGAGCACCTGGATTTACGTCCTATTCCTCC 2155
|||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2101 CACTGCAGAACTCAAGCTTTTTTTGGAAGTAGAGCACCTGGATTTACGTCCTATTCCTCC 2160
Query 2156 TCCTGAAAAATCAAAAGAAGATATTCTGCTTTTCTTTAAGCTTTATGACCCCGAGAAGGC 2215
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 2161 TCCTGAAAAATCAAAAGAAGATATTCTTCTTTTCTTCAAGCTTTATGACCCCGAGAAGGC 2220
Query 2216 AGTATTAAGCTATGCAGGCAGGCTGATGGTGAAAAGTTCCAGTAAGCCTATGGATATAAC 2275
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AGTATTAAGCTATGCTGGCAGGCTGATGGTGAAAAGTTCCAGTAAGCCTATGGATATAAC 2280
Query 2276 TGGAAAACTTAATGAAATGGTTGGCTTTGCTCCTGATGAAGAAATAGAACTTTTTGAGGA 2335
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2281 TGGAAAACTGAATGAAATGGTTGGCTTTGCTCCTGATGAAGAAATAGAACTTTTTGAGGA 2340
Query 2336 AATCAAGTTTGAACCTTGTGTTATGTGCGAACACTTGGATAAGAAAACTTCATTCAGATT 2395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2341 AATCAAGTTTGAACCTTGTGTTATGTGCGAACACTTGGATAAGAAAACTTCATTCAGATT 2400
Query 2396 GTGTCAAATTGAAGATGGAGACATCATTTGCTTTCAGAAACCTCTAGTTAACAAGGAGAT 2455
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 2401 GTGTCAAATTGAAGATGGAGATATCATTTGCTTTCAGAAACCTCTTGTTAACAAGGAGAT 2460
Query 2456 TGAGTGCCGCTACCCAGCTGTGCCTTCGTTTCTTGAATATGTCCAGAACAGACAGCTGGT 2515
||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2461 TGAATGCCTCTACCCAGCTGTGCCTTCGTTTCTTGAATATGTCCAGAATAGACAGCTGGT 2520
Query 2516 CCGGTTTCGTGCTCTGGAAAAACCTAAAGAAGATGAGTTTGTTCTGGAGTTGTCGAAGCT 2575
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2521 CCGGTTTCGTGCTCTGGAAAAACCTAAAGAAGATGAGTTTGTTCTGGAGTTGTCGAAGCA 2580
Query 2576 GCACACTTATGACGATGTTGTGGAAAAAGTGGCTGAGAAGCTTGGTCTTGACGATCCATC 2635
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2581 GCACACTTATGACGATGTTGTGGAGAAAGTGGCTGAGAAGCTTGGTCTTGACGATCCATC 2640
Query 2636 CAAACTTAGGCTTACATCTCACAATTGCTATTCCCAGCAACCTAAGCCTCAGCCTATCAA 2695
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2641 CAAACTTAGGCTTACATCTCACAATTGCTATTCCCAGCAACCCAAGCCTCAGCCTATCAA 2700
Query 2696 ATACCGTGGAGTAGACCATTTGTCAGATATGTTAGTTCACTACAATCAGACGTCTGACAT 2755
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2701 GTACCGTGGAGTAGACCATTTGTCAGATATGTTAGTTCATTACAATCAGACGTCTGACAT 2760
Query 2756 TTTGTATTATGAAGTTCTGGACATTCCTCTTCCAGAATTGCAAGGTCTTAAAACCTTAAA 2815
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 2761 TTTGTATTATGAAGTTCTGGACATCCCTCTTCCAGAATTACAAGGTCTTAAAACCTTAAA 2820
Query 2816 AGTTGCTTTCCATCATGCCACGAAGGAAGAAGTGGTAATCCACAATATCAGACTACCTAA 2875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2821 AGTTGCTTTCCATCATGCCACGAAGGAAGAAGTGGTAATCCACAATATCAGACTACCTAA 2880
Query 2876 ACAAAGCACGGTCGGAGATGTTATTAATGAACTTAAAACAAAGGTGGAGCTTTCGCATCC 2935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2881 ACAAAGCACGGTCGGAGATGTTATTAATGAACTTAAAACAAAGGTGGAGCTTTCGCATCC 2940
Query 2936 AGATGCAGAACTGAGATTGCTCGAGGTGTTTTACCACAAGATCTACAAGATTTTCCCATC 2995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2941 AGATGCAGAACTGAGATTGCTCGAGGTGTTTTACCACAAGATCTACAAGATTTTCCCATC 3000
Query 2996 AACTGAAAGAATTGAGAATATAAATGACCAGTACTGGACTTTACGAGCTGAGGAGATTCC 3055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3001 AACTGAAAGAATTGAGAATATAAATGACCAGTACTGGACTTTACGAGCTGAGGAGATTCC 3060
Query 3056 GGAAGAAGAGAAGAATATCGGTCCAAATGATCGCTTAATTCTTGTGTACCATTTTGCTAA 3115
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 3061 GGAAGAAGAGAAGAATATTGGTCCAAATGATCGCTTAATTCTTGTGTACCATTTTGCCAA 3120
Query 3116 GGAGACTGGACAAAATCAGCAAGTGCAAAACTTTGGCGAGCCCTTCTTCTTGGTAATCCA 3175
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3121 GGAGACTGGACAAAACCAGCAAGTGCAAAACTTTGGCGAGCCCTTCTTCTTGGTAATCCA 3180
Query 3176 TGAAGGTGAAACTCTTGAAGAAATAAAGAACCGTATCCAAAAGAAGCTTCATGTATCCGA 3235
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 3181 TGAAGGTGAAACTCTTGAAGAAATCAAGAACCGTATCCAAAAGAAGCTTCATGTATCTGA 3240
Query 3236 TGAGGACTTTGCCAAGTGGAAGTTTGCGTTTATGTCAATGGGGCGTCCAGAGTACTTACA 3295
||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 3241 TGAAGATTTTGCCAAGTGGAAGTTTGCGTTCATGTCAATGGGGCGTCCAGAGTACTTGCA 3300
Query 3296 GGACACAGATGTTGTTTATAATCGCTTTCAGAGAAGAGATGTCTATGGTGCTTTTGAGCA 3355
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3301 GGACACAGATGTTGTTTATAATCGCTTCCAGAGAAGAGATGTCTATGGTGCTTTTGAGCA 3360
Query 3356 GTACCTCGGGTTGGAGCATGCTGACACTACTCCTAAGAGGGCTTATGCTGCAAACCAGAA 3415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3361 GTACCTCGGGTTGGAGCATGCTGACACTACTCCTAAGAGGGCTTATGCTGCAAACCAGAA 3420
Query 3416 CCGCCACGCTTACGAGAAGCCGGTGAAAATATACAATTAGCCCCA------GA------- 3462
|||||| ||||||||||||||||| |||||||||||||||||||| ||
Sbjct 3421 CCGCCATGCTTACGAGAAGCCGGTAAAAATATACAATTAGCCCCAAAACATGAACACAAA 3480
Query 3463 -G--A-----CATTGTGGCAGCAACGTTGGACCAAGGCATTGATTGGACCAATGCATCGA 3514
| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3481 TGTCAGGAGACATTGTGGCAGCAACGTTGGACCAAGGCATTGATTGGACCAATGCATCGA 3540
Query 3515 ATAAGGAGGGAAAGAGAGAGTGTGAGGGTGTGATGATGACCGTAGGATGTTGTAGAGAAT 3574
||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3541 ATAAGAAGGGAAAGGGCGAGTGTGAGGGTGTGATGATGACCGTAGGATGTTGTAGAGAAT 3600
Query 3575 CTGGTCTGATAGGGTTTTGGGTTGCGCATTGATAGTGGTGTGTTTTCTATTTTT--CTTT 3632
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3601 CTGGTCTGATAGGGTTTTGGGTTGCGCATTGATAGTGGTGTGTTTTCTATTTTTTTCTTT 3660
Query 3633 -CG-TG---C-TT---------C-------AATACTTTTGTGTTAATATCTGGAATGTGT 3670
| | | || | |||||||| |||||||||||||||||||||
Sbjct 3661 TCAATCTATCCTTATTTTATTTCGTGCTTCAATACTTT-GTGTTAATATCTGGAATGTGT 3719
Query 3671 GAAGACCATTGGCACATGCAATTTTTATTTTCCaaaaaaaaaTATATGGAAGCCCTTCGC 3730
||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 3720 GAAGACCATTG-CACATGCAATTTTTATTTTCCAAAAAAAGA-ATATGGAAGCCCTTCGC 3777
Query 3731 TTGGATTCGGGAGCGCGGTTTGGCTTTCAGAGTTAATAGAATACCGAAACATTTGTAATT 3790
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3778 TTGGATTCGGGAGCGCGGTTTGGCTTTCAGAGTTTATAGAATACCGAAACATTTGTAATT 3837
Query 3791 TTAGAGATTGGGGTTTAAGAAGATTTTTGACTGAGGAAATTTGCATTCTTTT 3842
|||||||||| |||||||||||||||||||||||||| ||||| ||||||||
Sbjct 3838 TTAGAGATTGTGGTTTAAGAAGATTTTTGACTGAGGAGATTTGTATTCTTTT 3889
> AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13
| chr3:3761388-3770413 REVERSE LENGTH=3841
Length=3841
Score = 3657 bits (1980), Expect = 0.0
Identities = 2983/3463 (86%), Gaps = 86/3463 (2%)
Strand=Plus/Plus
Query 35 CTTTGATT-TT-TCTCTGCATCGTCGGTCTCTCTTTTGCCTT-TCTCGATCCCACCGTCA 91
|||| ||| || |||||| ||| | | ||||||| | ||| ||||||||| |||||
Sbjct 53 CTTTCATTGTTCTCTCTG-TTCGGC-G-CTCTCTTCT-ACTTCTCTCGATCCGACCGT-G 107
Query 92 AATC-CTTCTCCGG-CCAATGACTATGATGACTCCGCCTCCCG-TTGATCAGCCA-GAAG 147
|||| | | | ||| |||||||||||||||||||||| ||| | |||||| || ||||
Sbjct 108 AATCAC-TAT-CGGAGCAATGACTATGATGACTCCGCC-GCCGCTAGATCAG-CAGGAAG 163
Query 148 ATGAGGAGATGCTTGTGCCGAATTCAGATTTGGTCGACGGTCCTGCTCAGCCCATGGAAG 207
| |||||||||||||| |||||| | ||||||||||| || | ||||||| |||||||
Sbjct 164 ACGAGGAGATGCTTGTTCCGAATCCGGATTTGGTCGA-GGGAC--CTCAGCCTATGGAAG 220
Query 208 TTACCCAACCCGAGACTGCTGCGAGTACTGTGGAGAA-CCAGCCAGCTGAGGATCCTCCT 266
|| ||||| | || ||||||| | |||||||||| ||| ||| | |||||||||||
Sbjct 221 TTGCCCAAACTGATCCTGCTGCTACCGCTGTGGAGAATCCA-CCACCCGAGGATCCTCCA 279
Query 267 ACTCTGAAATTCACGTGGACTATCCCTAAT-TTCTCTAGGCAAAACACCAGGAAGCATTA 325
| |||||||||||||||||| ||||| ||| ||| |||||| || ||||||||||||||
Sbjct 280 AGTCTGAAATTCACGTGGACCATCCC-AATGTTCACTAGGCTCAATACCAGGAAGCATTA 338
Query 326 CTCCGATGTATTTGTCGTTGGAGGTTACAAATGGCGCATATT-AATTTTCCCGAAAGGGA 384
||| || |||||||| || || ||||| || ||||| ||||| | ||||||| ||||| |
Sbjct 339 CTCTGACGTATTTGTTGTAGGCGGTTATAAGTGGCGTATATTGATTTTTCCC-AAAGGAA 397
Query 385 ACAATGTTGATCATTTGTCCATGTACTTGGATGTTTCTGATGCTGCGAGTTTGCCGTACG 444
||||||| || |||||||| ||||||||||||||| |||||||||||| |||||||||||
Sbjct 398 ACAATGTCGACCATTTGTCAATGTACTTGGATGTTGCTGATGCTGCGAATTTGCCGTACG 457
Query 445 GATGGAGCAGATATGCTCAGTTCAGTCTGGCTGTAGTCAATCAAATCCAC-TCCAGATAT 503
| |||||||||||| | |||||||||||||||||||| |||||| || || || |||||
Sbjct 458 GGTGGAGCAGATATTCACAGTTCAGTCTGGCTGTAGTGAATCAAGTCAACAACC-GATAT 516
Query 504 ACCATTAGAAAGGAGACGCAACATCAATTCAATGCTAGAGAAAGCGATTGGGGATTTACA 563
|||| ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 517 TCCATCAGAAAGGAGACGCAACATCAATTCAATGCAAGAGAAAGCGACTGGGGGTTTACA 576
Query 564 TCATTCATGCCTCTAAGTGAACTTTATGATCCTAGTAGAGGATATTTAGCGAATGATACT 623
|||||||||||||| || || || ||||| || | | |||||||||||| |||||| |||
Sbjct 577 TCATTCATGCCTCTCAGCGAGCTCTATGAACCCACTCGAGGATATTTAGTGAATGACACT 636
Query 624 GTTTTGGTTGAAGCTGAAGTCGCTGTACGTAAGGTTCTTGATTACTGGTCATATGACTCT 683
||| || ||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||
Sbjct 637 GTTCTGATTGAAGCTGAAGTTGCTGTGCGTAAAGTTCTTGATTATTGGTCATATGACTCA 696
Query 684 AAAAAAGAGACTGGTTTTGTTGGACTCAAGAACCAAGGTGCAACTTGTTACATGAATTCT 743
||||||||||| |||||||||||||| || ||||||||||| || |||||||||||||||
Sbjct 697 AAAAAAGAGACAGGTTTTGTTGGACTAAAAAACCAAGGTGCTACCTGTTACATGAATTCT 756
Query 744 CTCCTACAGACACTATACCACATACCTTACTTCAGAAAGGCTGTATACCACATGCCGACA 803
||||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct 757 CTCCTGCAGACTTTATACCACATACCTTACTTTAGAAAGGCTGTTTACCACATGCCAACG 816
Query 804 ACTGAGAACGATTTACCCACAGCAAGTATACCTTTGGCTCTCCAAAGTTTGTTTTACAAG 863
||||| || ||| ||| || || ||||| || ||||| ||||| ||||| |||||||||
Sbjct 817 ACTGAAAATGATGCACCTACCGCTAGTATCCCATTGGCGCTCCAGAGTTTATTTTACAAG 876
Query 864 CTCCAATATAATGACACTAGTGTTGCAACAAAGGAGCTGACAAAGTCTTTTGGTTGGGAT 923
|| || |||||||| || ||||| || |||||||||||||||||||| ||||||||||||
Sbjct 877 CTTCAGTATAATGATACCAGTGTAGCGACAAAGGAGCTGACAAAGTCGTTTGGTTGGGAT 936
Query 924 ACATATGATTCCTTTATGCAACATGATGTGCAAGAACTCAATC-GGGTTCTCTGCGAAAA 982
||||||||||| ||||||||||||||||| ||||||||||| | | |||||||| |||||
Sbjct 937 ACATATGATTCTTTTATGCAACATGATGTACAAGAACTCAA-CAGAGTTCTCTGTGAAAA 995
Query 983 GCTTGAGGACAAAATGAAGGGAACTGTTGTGGAGGGAACAATACAACAA-CTATTTGAGG 1041
|||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| |
Sbjct 996 GCTTGAGGACAAGATGAAGGGAACTGTTGTGGAGGGAACAATACAA-AAGCTATTTGAAG 1054
Query 1042 GCCACCATATGAATTATATTGAGTGCATAAATGTAGATTTCAAATCGACACGGAAAGAAT 1101
| ||||| |||||||| ||||||||||| |||||||||| |||||| ||||||||||| |
Sbjct 1055 GTCACCACATGAATTACATTGAGTGCATTAATGTAGATTACAAATCTACACGGAAAGAGT 1114
Query 1102 CATTTTACGACCTTCAGCTGGATGTGAAAGGCTGCAAGGATGTTTATGCTTCTTTTGACA 1161
||||||| ||||| ||||| ||||| ||||||||||| ||||| ||||||||||||||||
Sbjct 1115 CATTTTATGACCTCCAGCTTGATGTTAAAGGCTGCAAAGATGTATATGCTTCTTTTGACA 1174
Query 1162 AGTATGTTGAAGTTGAACGTCTTGAAGGAGATAACAAATATCATGCAGAAGGACATGGTT 1221
||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||| ||
Sbjct 1175 AGTATGTTGAAGTTGAACGCCTTGAAGGAGACAACAAATACCATGCAGAAGGACATGATT 1234
Query 1222 TACAGGATGCaaaaaaaGGTGTTCTTTTCATTGACTTTCCACCGGTTCTTCAACTCCAGC 1281
| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||
Sbjct 1235 TGCAGGATGCAAAAAAAGGTGTTCTATTCATAGACTTTCCACCAGTTCTTCAACTTCAGC 1294
Query 1282 TCAAGAGGTTTGAATATGACTTTATGAGGGACACCATGGTAAAGATAAACGATCGGTATG 1341
|||||||||||||||| || |||||||||||||| ||||| ||||| || ||||||||||
Sbjct 1295 TCAAGAGGTTTGAATACGATTTTATGAGGGACACAATGGTGAAGATTAATGATCGGTATG 1354
Query 1342 AGTTTCCTCTTGAACTGGATCTTGATAGAGAAAATGGAAAG-TATCTGTCTCCTGATGCT 1400
|||||||||| |||||||||| || |||||| |||| ||| ||| | || ||||||||
Sbjct 1355 AGTTTCCTCTCCAACTGGATCTCGACAGAGAAGATGG-AAGATATTTATCCCCTGATGCA 1413
Query 1401 GACAGGAGTGTCCGCAACCTTTATACTCTTCACAGTGTCTTAGTTCATAGTGGAGGAGTA 1460
|||| |||||||||||| || || || || ||||||||||| ||||| |||||||||||
Sbjct 1414 GACAAGAGTGTCCGCAATCTCTACACCCTCCACAGTGTCTTGGTTCACAGTGGAGGAGTG 1473
Query 1461 CATGGTGGGCACTATTACGCTTTTATAAGACCTACGCTCTCAGATCAGTGGTATAAATTT 1520
||||| ||||| ||||| |||||||| || || || || |||||||||||||||||||||
Sbjct 1474 CATGGAGGGCATTATTATGCTTTTATTAGGCCAACACTTTCAGATCAGTGGTATAAATTT 1533
Query 1521 GATGATGAACGCGTAAC-AAAGGAAGATTTGAAAAGGGCATTGGAGGAGCAATATGGTGG 1579
|| |||||||| || || ||| |||||| | ||||| ||| |||| ||||||||||||||
Sbjct 1534 GACGATGAACGGGTCACGAAA-GAAGATGTCAAAAGAGCACTGGAAGAGCAATATGGTGG 1592
Query 1580 TGAAGAAGAGCTACCACAGACTAATCCTGGTTTCAATAACCCTCCTTTCAAATTCACAAA 1639
|||||||||| |||| |||| |||||||||||||||||| || |||||||||||||||||
Sbjct 1593 TGAAGAAGAGTTACCGCAGAATAATCCTGGTTTCAATAATCCACCTTTCAAATTCACAAA 1652
Query 1640 GTACTCGAATGCTTACATGCTTGTTTATATCCGGGAAAGTGACAAGGATAAAATAATCTG 1699
||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1653 ATACTCGAATGCATACATGCTTGTTTATATTCGGGAAAGTGACAAGGATAAGATAATCTG 1712
Query 1700 CAACGTTGATGAGAAAGACATAGCAGAACATTTAAGGGTGAGGCT-aaagaaagagcaag 1758
||||||||||||||||||||| || |||||||| |||||||||| ||| ||||| ||||
Sbjct 1713 CAACGTTGATGAGAAAGACATTGCGGAACATTTGCGGGTGAGGCTGAAA-AAAGAACAAG 1771
Query 1759 aagaaaaggaagataaaagaagaTACAAGGCACAAGCTCACCTATAT-ACAATAATTAAG 1817
||||||||||||||||||||| ||||||||| ||||||||||| | | || | ||| |||
Sbjct 1772 AAGAAAAGGAAGATAAAAGAAAATACAAGGCTCAAGCTCACCT-TTTCACGACAATCAAG 1830
Query 1818 GTTGCAAGAGATGAAGATC-TTAAGGAACAAATCGGGAAGGATATATATTTTGATCTTGT 1876
|| ||||||||||| || | | | || ||||| || ||| |||||||||||||||||||
Sbjct 1831 GTCGCAAGAGATGATGA-CATCACTGAGCAAATTGGAAAGAATATATATTTTGATCTTGT 1889
Query 1877 GGACCATGACAAAGTTCGCAGTTTCCGTATCCAGAAACAGACACCATTTCAACAGTTTAA 1936
|| ||||| ||||| | ||||| || |||||||||||||| || |||||||| |||||
Sbjct 1890 TGATCATGAAAAAGTGAGGAGTTTTCGAATCCAGAAACAGACCCCCTTTCAACAATTTAA 1949
Query 1937 GGAGGAGGTAGCCAAAGAATTTGGTGTACCTGTTCAGTTACAGAGGTTCTGGATTTGGGC 1996
||| |||||||||||||| |||||||| || ||||| ||||| |||||||||| |||||
Sbjct 1950 GGAAGAGGTAGCCAAAGAGTTTGGTGTCCCGGTTCAACTACAGCGGTTCTGGATCTGGGC 2009
Query 1997 TAAGCGACAAAACCATACCTATCGTCCCAATCGCCCCCTTA-CGCCTCAA-GAGGAATTA 2054
||||| ||||||||||| || || |||||||| |||| || | ||| || || ||||||
Sbjct 2010 AAAGCGTCAAAACCATACTTACCGCCCCAATCGTCCCC-TATCACCT-AATGAAGAATTA 2067
Query 2055 CA-ACAGGTTGGACAAATAAGAGAAGCATCTAACAAGGCAAACACTGCAGAACTAAAGCT 2113
|| || ||||||||||||| |||| ||||||||||||||||||| ||| || ||||||||
Sbjct 2068 CAGAC-GGTTGGACAAATACGAGAGGCATCTAACAAGGCAAACAATGCTGAGCTAAAGCT 2126
Query 2114 -TTTCCTGGAAGTAGAGC----ACCTGGATTTA-CGTCCTATTCCTCCTCCTGAAAAATC 2167
||| ||||| |||||| ||| ||| | | | |||||||||||| || |||||| |
Sbjct 2127 GTTT-TTGGAAATAGAGCGTGGACC-GGA-TGACCTTCCTATTCCTCCCCCAGAAAAAAC 2183
Query 2168 AAAAGAAGATATTCTGCTTTTCTTTAAGCTTTATGACCCCGAGAAGGCAGTATTAAGCTA 2227
|| ||||| || ||||||||||| || |||||||| ||||| |||||| |||| ||
Sbjct 2184 TTCTGAGGATATCCTTCTTTTCTTTAAACTCTATGACCCTGAGAACGCAGTACTAAGATA 2243
Query 2228 TGCAGGCAGGCTGATGGTGAAAAGTTCCAGTAAGCCTATGGATATAACT-GGAAAACTT- 2285
|| |||||||| ||||||||||||||||||||||| |||||||| | | || || ||
Sbjct 2244 TGTTGGCAGGCTAATGGTGAAAAGTTCCAGTAAGCCCATGGATAT-AGTAGGGCAA-TTG 2301
Query 2286 AATGAAATGGTTGGCTTTGCTCCTGATGAAGAAATAGAACTTTTTGAGGAAATCAAGTTT 2345
||| |||||| ||| |||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 2302 AATAAAATGGCTGGTTTTGCTCCTGATGAGGAAATAGAACTTTTTGAGGAAATAAAGTTT 2361
Query 2346 GAACCTTGTGTTATGTGCGAACA-CTTGGATAAGAAAACTTCATTCAGATTGTGTCAAAT 2404
|||||||| || ||||| ||||| || |||||||| ||||| ||||| ||||||||||
Sbjct 2362 GAACCTTGCGTAATGTGTGAACAGATT-GATAAGAAGACTTCTTTCAGGCTGTGTCAAAT 2420
Query 2405 TGAAGATGGAGACATCATTTGCTT-TCAGAAACCTCTAGT-TAACAAGGAGATTGAGTGC 2462
|||||||||||| |||||||| || |||||||||||| | || | |||||| ||| |
Sbjct 2421 TGAAGATGGAGATATCATTTG-TTATCAGAAACCTCT-TTCTATCGAGGAGAGTGAATTT 2478
Query 2463 CGCTACCCAGCTGTGCCTTCGTTTCTT-GAATATGTCCAGAA-CAGACAGCTGGTCCGGT 2520
|| ||||||| |||||| || ||| || || ||||| ||||| | || ||||||| || |
Sbjct 2479 CGATACCCAGATGTGCCATCATTT-TTGGAGTATGTACAGAATC-GAGAGCTGGTGCGTT 2536
Query 2521 TTCGTGCTCTGGAAAAACCTAAAGAAGATGAGTTTGTTCTGGAGTTGTCGAAGCTGCACA 2580
|||| | ||||||||||| ||||| ||||||||| | ||||| |||| ||||||||||
Sbjct 2537 TTCGCACACTGGAAAAACCAAAAGAGGATGAGTTTACTATGGAGCTGTCAAAGCTGCACA 2596
Query 2581 CTTATGACGATGTTGTGGAAAAAGTGGCTGAGAAGCTTGGTCTTGACGATCCATCCAAAC 2640
||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||| ||||
Sbjct 2597 CTTATGATGATGTAGTGGAAAGGGTGGCTGAGAAGCTTGGCCTTGACGATCCATCAAAAC 2656
Query 2641 TTAGGCTTACATCTCACAATTGCTATTCCCAGCAACCTAAGCCTCAGCCTATCAAATACC 2700
||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||
Sbjct 2657 TTAGGCTTACATCTCACAATTGCTACTCTCAGCAACCCAAGCCTCAGCCAATCAAATACC 2716
Query 2701 GTGGAGTAGACCAT-TTGTCAGATATGTTAGTTCACTACAATCAGACGTCTGACATTTTG 2759
|||||||||| ||| || |||||||||||||||||||| ||||||||||||||||| |||
Sbjct 2717 GTGGAGTAGATCATCTT-TCAGATATGTTAGTTCACTATAATCAGACGTCTGACATATTG 2775
Query 2760 TATTATGAAGTTCTGGACATTCCTCTTCCAGAATTGCAAGGTCTTAAAACCT-TAAAAGT 2818
|||||||||||| |||| ||||||||||||||||||||||||||||| | || |||||||
Sbjct 2776 TATTATGAAGTTTTGGATATTCCTCTTCCAGAATTGCAAGGTCTTAAGA-CTCTAAAAGT 2834
Query 2819 TGCTTTCCATCA-TGCCACGAAGGAAGAAGTGGTAATCCACAATATCAGACTACCTAAAC 2877
||||||||| | |||||| ||||| |||||| ||||||||||||||||||||||||| |
Sbjct 2835 AGCTTTCCAT-AGTGCCACAAAGGATGAAGTGATAATCCACAATATCAGACTACCTAAGC 2893
Query 2878 AAAGCACGGTCGGAGATGTTATTAATGAACTTAAAACAAAGGTGGAGCTTTCGCATCCAG 2937
| || || || |||||||||||||| ||||| ||||||||||||||||||||||||| ||
Sbjct 2894 AGAGTACTGTTGGAGATGTTATTAACGAACTGAAAACAAAGGTGGAGCTTTCGCATCAAG 2953
Query 2938 ATGCAGAACTGAGATTGCTCGAGGTGTTTTACCACAAGATCTACAAGAT-TTTCCCATCA 2996
||||||||||||| || || ||||| |||| |||||||||||||||||| ||| |||||
Sbjct 2954 ATGCAGAACTGAGGTTACTTGAGGTCTTTTTCCACAAGATCTACAAGATCTTT-CCATCT 3012
Query 2997 ACTGAAAGAATTGAGAATATAAATGACCAGTACTGGACTTTACGAGCTGAGGAGATTCCG 3056
|||||| ||||||| || || |||||||||||||||||||||||||| |||||||| ||
Sbjct 3013 ACTGAACGAATTGAAAACATCAATGACCAGTACTGGACTTTACGAGCAGAGGAGATACCT 3072
Query 3057 GAAGAAGAGAAGAATATCGGTCCAAATGATCGCTTAATTCTTGTGTACCATTTTGCTAAG 3116
||||||||||||||||| ||||| |||||| | ||||||| || || |||||| ||||
Sbjct 3073 GAAGAAGAGAAGAATATTGGTCCCAATGATAGGTTAATTCACGTATATCATTTTACTAAA 3132
Query 3117 GAGACTGGACAAAATCAGCAAGTGCAAAACTTTGGCGAGCCCTTCTTCTTGGTAATCCAT 3176
||| | ||||||||||||||||| ||||| ||||| || |||||||| |||||||||||
Sbjct 3133 GAGGCCGGACAAAATCAGCAAGTTCAAAATTTTGGGGAACCCTTCTTTTTGGTAATCCAC 3192
Query 3177 GAAGGTGAAACTCTT-GAAGAAATAAAGAACCGTATCCAAAAGAAGCTTCATGTATCC-G 3234
|||||||||||| || |||||||| |||| ||||||||||||||| || ||||| || |
Sbjct 3193 GAAGGTGAAACT-TTAGAAGAAATCAAGACCCGTATCCAAAAGAAACTCCATGT-CCCTG 3250
Query 3235 ATGAGGACTTTGCCAAGTGGAAGTTTGCGT--TTATGTCAATGGGGCGTCCAGAGTACTT 3292
|||||||||||||||||||||||||||| | || | |||||||| ||||| || |||||
Sbjct 3251 ATGAGGACTTTGCCAAGTGGAAGTTTGCATCGTT-T-TCAATGGGACGTCCTGATTACTT 3308
Query 3293 ACAGGACACAGATGTTGTTTATAATCGCTTTCAGAGAAGAGATGTCTATGGTGCTTTTGA 3352
| |||||||||||||||||||||||||||||||||||||||||| || ||||| | ||
Sbjct 3309 GCTGGACACAGATGTTGTTTATAATCGCTTTCAGAGAAGAGATGTATACGGTGCGTGGGA 3368
Query 3353 GCAGTACCTCGGGTTGGAGCATGCTGACACTACTCCTAAGAGGGCTTATGCTGCAAACCA 3412
|||||| || ||||||||||| ||| | | ||||||| ||||||||||||||||| ||
Sbjct 3369 GCAGTATCTTGGGTTGGAGCACATTGATAATGCTCCTAAAAGGGCTTATGCTGCAAATCA 3428
Query 3413 GAACCGCCACGCTTACGAGAAGCCGGTGAAAATATACAATTAG 3455
|||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 3429 GAACCGACACGCATACGAGAAGCCGGTGAAAATATACAATTAG 3471
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 191386887545
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5