BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487491
Length=1504
Score E
Sequences producing significant alignments: (Bits) Value
AT5G06780.1 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-li... 2176 0.0
AT3G12140.3 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-li... 573 2e-162
> AT5G06780.1 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like
domains-containing protein | chr5:2093926-2097129 REVERSE
LENGTH=1535
Length=1535
Score = 2176 bits (1178), Expect = 0.0
Identities = 1409/1516 (93%), Gaps = 34/1516 (2%)
Strand=Plus/Plus
Query 1 AGGTTTCTCTCTCCTTCAACTTGGAACTTCCGGTCGTCGATCTTCTCCCTTtctctctct 60
||||||||||||||| ||||||||||||||| ||| |||||||||| | ||||||||||
Sbjct 1 AGGTTTCTCTCTCCTCCAACTTGGAACTTCCCGTCTTCGATCTTCT--C-TTCTCTCTCT 57
Query 61 c-tc-tctctcACTGTGCCCAGCCAGGTAAAAACACTGCACTTCCGC-TTTT-TCAAGAT 116
| || || | | |||||||||||||| | |||||||||||||||||| |||| |||||||
Sbjct 58 CTTCATCGCACGCTGTGCCCAGCCAGCTCAAAACACTGCACTTCCGCTTTTTATCAAGAT 117
Query 117 CAATCTCTATCTCTATTCATAAAAAAGTTCTTTCCTTTTTGTCAAATTCTTTCAATTTCT 176
||||||||| | | || | || ||||||||||||||||||||||||||||||||||||||
Sbjct 118 CAATCTCTA-C-CAATACTTAGAAAAGTTCTTTCCTTTTTGTCAAATTCTTTCAATTTCT 175
Query 177 CACTTGAATTCCCTACGAATTACTCTCACTTCGGATCCAATCAGCTCGTTATATCCTCTG 236
| ||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct 176 CTCTTCAATTCCCTACGAATTA--CTCACTTCGGATCCAATCAGCTCTTTATAGCCTCTG 233
Query 237 CGTTTGGGAGTCAATCTTTCTCTCTTCGATAATAAAGGGTTTCGTATAAAGATTGCGGTT 296
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||
Sbjct 234 CGTTTGGGAGTCAATCTTTCTCTCTTCGACAATTAAGGGTTTCGTATAAAGATTGCTGTT 293
Query 297 TTACGACAGGATTCTGTGTAAGGAGAAGAAGGGCTAGTTTCATTTGGATGGAAAGTATAT 356
|||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||
Sbjct 294 TTACGACAGGATTCTGAATAAGGAGAAGAAGGGTTGGTTTCATTTGGATGGAAAGTATAT 353
Query 357 GGTAGGTCTACACATTAATATGGAAGCGCAGATTCATATACTTGAGCAGGAAGCTTATTC 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 354 GGTAGGTCTACACATTAATATGGAAGCGCAGATTCATATACTTGAGCAGGAAGCTTATTC 413
Query 417 TGCTGTATTAAGGGCTTTTCAAGCACAGGCTGATGAATTTTCTTGGGATAAA-CAAGACG 475
|||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 414 TGCTGTATTAAGAGCTTTTCAAGCACAGGCTGATGAATTTTCTTGGGATAAAGCAAC-CG 472
Query 476 TGATGACAAACCTACGTAAAGAATTGAGGATATCTGATGATGAAAACCGAGAACTGTTGA 535
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 473 TGATGACAAACCTACGTAAAGAATTGAGGATATCTGATGATGAAAACCGACAACTGTTGA 532
Query 536 ACAATCTTCATAATGATGATCTTATCAAAAGAATAAGAGATTCGAGACCTAGAGGTGGAA 595
||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 533 ACAATGTCCATAATGATGATCTTATCAAAAGAATAAGAGATTCGAGACCAAGAGGTGGAA 592
Query 596 ACCAGGTTGTTAGACATCAATCCCTCGATGTTCTTCCTAGTCCGACCTTTTCAGCTTCTC 655
||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||
Sbjct 593 ACCAGGTTGTTAGACATCAGTCCCTCGATGTTCATCCTAGTCCGACTTTTTCAGCTTCTC 652
Query 656 GAAAGAAACAGAAGACGTTCCAATCCTATCCGTCGATTGGTTCTACTAGAAATAAGTCGT 715
| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 653 GGAAGAAACAGAAGACGTTCCAATCCTATCCGTCGATTGGTTCTACTAGAAGTAAGTCAT 712
Query 716 TCAATAACCGTGTAGTAACAGCAAATGAACCCGCTGAAGCTCTTATTGGAAGAAAAGTGT 775
||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||
Sbjct 713 TCAATAACCGTGTAGTATCAGCAAATGAACCTGCGGAAGCTCTTATTGGAAGAAAAGTGT 772
Query 776 GGACAAAATGGCCTGATGACAACAGCTTTTATGAAGCAGTAGTGACACAATACAATGCAG 835
|||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 773 GGACAAAATGGCCTGAAGACAACAGCTTTTATGAAGCAGTAGTTACACAATACAATGCAA 832
Query 836 ATGAGGGGCGACATGCGTTGGTATATGACATAAACACAGCCAATGAGACGTGGGAATGGG 895
||||||| |||||||||||||||||||| |||||||||| |||||||| ||||||||||
Sbjct 833 ATGAGGGTCGACATGCGTTGGTATATGATATAAACACAGTGAATGAGACATGGGAATGGG 892
Query 896 TTGATCTTAAGGAGATTCCACCGGAAGATATAAGATGGGATGGAGAGGA-GAATGGGGTA 954
|||||||||| ||||||||| || ||||||||||||||||||||||||| || |||||||
Sbjct 893 TTGATCTTAATGAGATTCCAACGAAAGATATAAGATGGGATGGAGAGGAAGA-TGGGGTA 951
Query 955 ACTTTAAATGTAGGACATGGCGGTGGAACAACCCGTGGGAATCGAAGAACCTTAAGCCAT 1014
||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 952 ACTTTGAATGTAGGACATGGCGGTGGAACAACTCGTGGGAATCGAAGGACCTTAAGCCAT 1011
Query 1015 GGTGGTAGAGGGAGAGGTCCAAGAACTCAGCCAAGAAGAGAACATTTAGCAACGGAAAAC 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1012 GGTGGTAGAGGGAGAGGTCCAAGAACTCAGCCAAGAAGAGAACATTTAGCAACGGAAAAC 1071
Query 1075 GGTGGTGGGAGGAAGTTTTTCGATGAGATTGAATTGTTCAACACAGACTCACTTGTGAAA 1134
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1072 GGTGGTGGGAGGAAGTTTTTCGGTGAGATTGAATTGTTCAACACAGACTCACTTGTGAAA 1131
Query 1135 GAGGTGGAGAGAGTTTTTGATTCTAACCTTCCTGATCCACATGAGCTTGATAAGGCCAAG 1194
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1132 GAGGTCGAGAGAGTTTTTGATTCAAACCTTCCTGATCCACATGAGCTTGATAAGGCCAAG 1191
Query 1195 AAACTACTCAAGGAACATGAACAGGCGCTTATTGCTGCCATTGCAAGGCTTGCGGATGCT 1254
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1192 AAGCTACTCAAGGAACATGAACAGGCGCTTATTGCTGCCATTGCAAGGCTTACGGATGCT 1251
Query 1255 TCTGATTACGAAACCGATGGAGAAGAACCGTATTCGCATGAGCTTCCAATGCTGCTGGGA 1314
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 TCTGATTACGAAAGCGATGGAGAAGAACCGTATTCGCATGAGCTTCCAATGCTGCTGGGG 1311
Query 1315 TGAC-ACTGGATCAAAAAACACCATCAACCCTAGGATAAATGACCAGCAATAtttctttt 1373
||| | || || | |||||||| |||||||| ||||||| |||||||||||||||
Sbjct 1312 TGAGTA-TGTATGA-----CACCATCACCCCTAGGAAAAATGACTAGCAATATTTCTTTT 1365
Query 1374 ttctt-t-ttATT-CTCCTAAGGGATCCTAGAAAAGGATTTTGTTCATATATGATAAACA 1430
| ||| | || || || |||||||||| |||||| ||||||||||||||||||| ||||
Sbjct 1366 T-CTTCTGTT-TTGCTT-TAAGGGATCCCAGAAAATGATTTTGTTCATATATGATGAACA 1422
Query 1431 -TTAGTA-T-T-CTTTTAAGTTGTGGTTTCAGA-TGTATGATATATATTCGTTAGGAATT 1485
|||||| | | ||| ||| ||||||||||||| ||||||| | ||| ||||||||||||
Sbjct 1423 ATTAGTAGTATTCTTCTAATTTGTGGTTTCAGAATGTATGAAA-ATAATCGTTAGGAATT 1481
Query 1486 TTGTTTGTAAAAACAC 1501
||||||||||||||||
Sbjct 1482 TTGTTTGTAAAAACAC 1497
> AT3G12140.3 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like
domains-containing protein | chr3:3869069-3871713 REVERSE
LENGTH=1535
Length=1535
Score = 573 bits (310), Expect = 2e-162
Identities = 788/1006 (78%), Gaps = 83/1006 (8%)
Strand=Plus/Plus
Query 326 AGGGCTAG-TTTCATTTGGATGGAAAGTATATGGTAGGT---CTACACATTAATATGGAA 381
|||| ||| |||| |||||||||||| | | | | | | ||||| | | |||||| |
Sbjct 279 AGGGATAGCTTTCGTTTGGATGGAAATTCTCT-GAAACTAAACTACATAGTGATATGG-A 336
Query 382 G-CGCAGATTCAT-ATACTTGAGCAGGAAGCTTATTCTGCTGTATTAAGGGCTTTTCAAG 439
| | || |||||| | ||||||||||||||| ||| | ||||| |||||||||||| |||
Sbjct 337 GACACAAATTCATCA-ACTTGAGCAGGAAGCATATACCGCTGTTTTAAGGGCTTTTAAAG 395
Query 440 CACAGGCTGATG-AATTTTCTTGGGATAAA-CAAGACGTGATGA-CAAACCTACGTAAAG 496
| ||| |||||| | |||||||||| ||| ||| | |||| | | || | |||||||
Sbjct 396 CGCAGTCTGATGCGA-TTTCTTGGGAAAAAGAAAG-CTTGATAACCGAA-TTGCGTAAAG 452
Query 497 AATTGAGGA-TATCTGATGATGAAAACCGAGAACTGT-TGAACAATCTTC-ATAATGATG 553
|||||| || |||||||||||||| | ||||| || | | | | || |||| ||||
Sbjct 453 AATTGA-GAGTATCTGATGATGAACATCGAGAGCT-TCT-CAGTAGGGTCAATAAGGATG 509
Query 554 AT-CTTATCAAAAGAATAAGAGATTCGAGACCTAGAGGTGGAAACCAGGTTGTTAGACAT 612
|| | |||| | || |||||||||| ||||| |||| | || ||| || |||||||
Sbjct 510 ATAC-TATCCAGAGGATAAGAGATTGGAGACAGGGAGGCGCAAGCCAAATTACTAGACAT 568
Query 613 -C-A--A-TC--CC--TCGATGTTCTTCCTAGTCCGACCTTT-TCAGCTTCTCGAAAGAA 662
| | | || || | ||||||||||||||||| | |||| |||||| | ||||||||
Sbjct 569 GCAACTATTCAGCCTTTTGATGTTCTTCCTAGTCCCA-CTTTCTCAGCTGCCCGAAAGAA 627
Query 663 ACAGAAGAC-GTTCCAATC--CT-ATCCGTCGATTGGTTCTACTAGAAATAAGTCGTTCA 718
|||||| || |||| ||| | |||| || |||||| | ||| |||||| ||| ||||
Sbjct 628 ACAGAAAACATTTCC-ATCTTATAATCCATCAATTGGTGCGACTGGAAATAGGTCATTCA 686
Query 719 ATAA-C--C--GTGT--AGT---A-A-CAGCAAATGAACCCGCTGAAGCTCTTATTGGAA 766
|||| | | || | ||| | | ||| ||||||| | ||||||||||| || ||||
Sbjct 687 ATAATCGTCTGGTATCCAGTGGCATATCAGGAAATGAATCTGCTGAAGCTCTGATCGGAA 746
Query 767 GAAAAGTGTGGACAAAATGGCCTGATGACAAC-AGCTTTTATGAAGCAGT-AGTGACACA 824
||||||||||||||||||||||||| || ||| | ||| ||||||||| | | | || ||
Sbjct 747 GAAAAGTGTGGACAAAATGGCCTGAAGATAACCA-CTTCTATGAAGCAATTA-TAACCCA 804
Query 825 ATACAATGCAGATGAGGGGCGACATGCGTTGGTATATGACATAAACACAGCCAATGAGAC 884
||||||||||||||||| || ||||| ||||| ||||| ||| || |||| ||||| ||
Sbjct 805 GTACAATGCAGATGAGGGTCGGCATGCTTTGGTGTATGATATACACGCAGCTAATGAAAC 864
Query 885 GTGGGAATGGGTTGATCTTAAGGAGATTCCACCGGAAGATATAAGATGGGATGGAGAGGA 944
|||||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||
Sbjct 865 GTGGGAATGGGTTGATCTCAAGGAGATACCACCGGAAGACATAAGATGGGATGGGGAGGA 924
Query 945 GAATGGGGTAACTTTAAATGTAGGACATGGCGGTGGAACAACCCGTGGGAATC-GAAGAA 1003
|| ||||||| ||||||| | |||||||| ||| | | |||||| || | |||||
Sbjct 925 GAGTGGGGTAGCTTTAAACATTGGACATGGAAGTGCATCCTTCCGTGGCAA-CAGAAGAG 983
Query 1004 -CCTTAAGCCATGGTGGTAGAGGGAGAGGTCCAAGAA--C-TCAGCCAAGAAGAGAACAT 1059
|| || ||||||||||||||||||||| ||||||| | ||| |||||||| |||| |
Sbjct 984 GCCA-AATCCATGGTGGTAGAGGGAGAGGACCAAGAATTCATCAACCAAGAAGGGAAC-T 1041
Query 1060 T-TA--GCAACGGA-A-AAC-G---G-T-G-G-TGGGAGGA-AGTTTT-TC-GATGAGAT 1103
| || || || | | ||| | | | | | |||| ||| | || || ||||| ||
Sbjct 1042 TGTACCGCCACCAACACAACAGAATGGTAGTGGTGGGCGGAGAACTTCCTCTGATGATAT 1101
Query 1104 TGAATTGTTCAACACAGACTCACTTGTGAAAGAGGTGGAGAGAGTTTTTGATTCTAAC-C 1162
||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||||| | |
Sbjct 1102 TGAGTTGTTCAACACAGACTCGCTTGTGAAGGAGGTGGAGAGAGTTTTCGATTCTA-CGC 1160
Query 1163 TTCCTGATCCACAT-GAGCTTGATAAGGCCAAGAAACTACTCAAGGAACATGAACAGGCG 1221
||||||||||| | ||||| || |||||||||||| | ||||||||||||||||||||
Sbjct 1161 ATCCTGATCCAC-TCGAGCTCGACAAGGCCAAGAAAATGCTCAAGGAACATGAACAGGCA 1219
Query 1222 CTTATTGCTGCCATTGCAAGGCTTGCGGATGCTTCTGATTACGAAA 1267
|| ||||||||||||||||||||||| ||| |||| ||| |||||
Sbjct 1220 CTCATTGCTGCCATTGCAAGGCTTGCTGATACTTCGGATGGCGAAA 1265
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74196405510
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5