BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487491 Length=1504 Score E Sequences producing significant alignments: (Bits) Value AT5G06780.1 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-li... 2176 0.0 AT3G12140.3 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-li... 573 2e-162 > AT5G06780.1 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein | chr5:2093926-2097129 REVERSE LENGTH=1535 Length=1535 Score = 2176 bits (1178), Expect = 0.0 Identities = 1409/1516 (93%), Gaps = 34/1516 (2%) Strand=Plus/Plus Query 1 AGGTTTCTCTCTCCTTCAACTTGGAACTTCCGGTCGTCGATCTTCTCCCTTtctctctct 60 ||||||||||||||| ||||||||||||||| ||| |||||||||| | |||||||||| Sbjct 1 AGGTTTCTCTCTCCTCCAACTTGGAACTTCCCGTCTTCGATCTTCT--C-TTCTCTCTCT 57 Query 61 c-tc-tctctcACTGTGCCCAGCCAGGTAAAAACACTGCACTTCCGC-TTTT-TCAAGAT 116 | || || | | |||||||||||||| | |||||||||||||||||| |||| ||||||| Sbjct 58 CTTCATCGCACGCTGTGCCCAGCCAGCTCAAAACACTGCACTTCCGCTTTTTATCAAGAT 117 Query 117 CAATCTCTATCTCTATTCATAAAAAAGTTCTTTCCTTTTTGTCAAATTCTTTCAATTTCT 176 ||||||||| | | || | || |||||||||||||||||||||||||||||||||||||| Sbjct 118 CAATCTCTA-C-CAATACTTAGAAAAGTTCTTTCCTTTTTGTCAAATTCTTTCAATTTCT 175 Query 177 CACTTGAATTCCCTACGAATTACTCTCACTTCGGATCCAATCAGCTCGTTATATCCTCTG 236 | ||| |||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 176 CTCTTCAATTCCCTACGAATTA--CTCACTTCGGATCCAATCAGCTCTTTATAGCCTCTG 233 Query 237 CGTTTGGGAGTCAATCTTTCTCTCTTCGATAATAAAGGGTTTCGTATAAAGATTGCGGTT 296 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| Sbjct 234 CGTTTGGGAGTCAATCTTTCTCTCTTCGACAATTAAGGGTTTCGTATAAAGATTGCTGTT 293 Query 297 TTACGACAGGATTCTGTGTAAGGAGAAGAAGGGCTAGTTTCATTTGGATGGAAAGTATAT 356 |||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||| Sbjct 294 TTACGACAGGATTCTGAATAAGGAGAAGAAGGGTTGGTTTCATTTGGATGGAAAGTATAT 353 Query 357 GGTAGGTCTACACATTAATATGGAAGCGCAGATTCATATACTTGAGCAGGAAGCTTATTC 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 354 GGTAGGTCTACACATTAATATGGAAGCGCAGATTCATATACTTGAGCAGGAAGCTTATTC 413 Query 417 TGCTGTATTAAGGGCTTTTCAAGCACAGGCTGATGAATTTTCTTGGGATAAA-CAAGACG 475 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 414 TGCTGTATTAAGAGCTTTTCAAGCACAGGCTGATGAATTTTCTTGGGATAAAGCAAC-CG 472 Query 476 TGATGACAAACCTACGTAAAGAATTGAGGATATCTGATGATGAAAACCGAGAACTGTTGA 535 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 473 TGATGACAAACCTACGTAAAGAATTGAGGATATCTGATGATGAAAACCGACAACTGTTGA 532 Query 536 ACAATCTTCATAATGATGATCTTATCAAAAGAATAAGAGATTCGAGACCTAGAGGTGGAA 595 ||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 533 ACAATGTCCATAATGATGATCTTATCAAAAGAATAAGAGATTCGAGACCAAGAGGTGGAA 592 Query 596 ACCAGGTTGTTAGACATCAATCCCTCGATGTTCTTCCTAGTCCGACCTTTTCAGCTTCTC 655 ||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| Sbjct 593 ACCAGGTTGTTAGACATCAGTCCCTCGATGTTCATCCTAGTCCGACTTTTTCAGCTTCTC 652 Query 656 GAAAGAAACAGAAGACGTTCCAATCCTATCCGTCGATTGGTTCTACTAGAAATAAGTCGT 715 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct 653 GGAAGAAACAGAAGACGTTCCAATCCTATCCGTCGATTGGTTCTACTAGAAGTAAGTCAT 712 Query 716 TCAATAACCGTGTAGTAACAGCAAATGAACCCGCTGAAGCTCTTATTGGAAGAAAAGTGT 775 ||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||| Sbjct 713 TCAATAACCGTGTAGTATCAGCAAATGAACCTGCGGAAGCTCTTATTGGAAGAAAAGTGT 772 Query 776 GGACAAAATGGCCTGATGACAACAGCTTTTATGAAGCAGTAGTGACACAATACAATGCAG 835 |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 773 GGACAAAATGGCCTGAAGACAACAGCTTTTATGAAGCAGTAGTTACACAATACAATGCAA 832 Query 836 ATGAGGGGCGACATGCGTTGGTATATGACATAAACACAGCCAATGAGACGTGGGAATGGG 895 ||||||| |||||||||||||||||||| |||||||||| |||||||| |||||||||| Sbjct 833 ATGAGGGTCGACATGCGTTGGTATATGATATAAACACAGTGAATGAGACATGGGAATGGG 892 Query 896 TTGATCTTAAGGAGATTCCACCGGAAGATATAAGATGGGATGGAGAGGA-GAATGGGGTA 954 |||||||||| ||||||||| || ||||||||||||||||||||||||| || ||||||| Sbjct 893 TTGATCTTAATGAGATTCCAACGAAAGATATAAGATGGGATGGAGAGGAAGA-TGGGGTA 951 Query 955 ACTTTAAATGTAGGACATGGCGGTGGAACAACCCGTGGGAATCGAAGAACCTTAAGCCAT 1014 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 952 ACTTTGAATGTAGGACATGGCGGTGGAACAACTCGTGGGAATCGAAGGACCTTAAGCCAT 1011 Query 1015 GGTGGTAGAGGGAGAGGTCCAAGAACTCAGCCAAGAAGAGAACATTTAGCAACGGAAAAC 1074 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1012 GGTGGTAGAGGGAGAGGTCCAAGAACTCAGCCAAGAAGAGAACATTTAGCAACGGAAAAC 1071 Query 1075 GGTGGTGGGAGGAAGTTTTTCGATGAGATTGAATTGTTCAACACAGACTCACTTGTGAAA 1134 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1072 GGTGGTGGGAGGAAGTTTTTCGGTGAGATTGAATTGTTCAACACAGACTCACTTGTGAAA 1131 Query 1135 GAGGTGGAGAGAGTTTTTGATTCTAACCTTCCTGATCCACATGAGCTTGATAAGGCCAAG 1194 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1132 GAGGTCGAGAGAGTTTTTGATTCAAACCTTCCTGATCCACATGAGCTTGATAAGGCCAAG 1191 Query 1195 AAACTACTCAAGGAACATGAACAGGCGCTTATTGCTGCCATTGCAAGGCTTGCGGATGCT 1254 || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1192 AAGCTACTCAAGGAACATGAACAGGCGCTTATTGCTGCCATTGCAAGGCTTACGGATGCT 1251 Query 1255 TCTGATTACGAAACCGATGGAGAAGAACCGTATTCGCATGAGCTTCCAATGCTGCTGGGA 1314 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1252 TCTGATTACGAAAGCGATGGAGAAGAACCGTATTCGCATGAGCTTCCAATGCTGCTGGGG 1311 Query 1315 TGAC-ACTGGATCAAAAAACACCATCAACCCTAGGATAAATGACCAGCAATAtttctttt 1373 ||| | || || | |||||||| |||||||| ||||||| ||||||||||||||| Sbjct 1312 TGAGTA-TGTATGA-----CACCATCACCCCTAGGAAAAATGACTAGCAATATTTCTTTT 1365 Query 1374 ttctt-t-ttATT-CTCCTAAGGGATCCTAGAAAAGGATTTTGTTCATATATGATAAACA 1430 | ||| | || || || |||||||||| |||||| ||||||||||||||||||| |||| Sbjct 1366 T-CTTCTGTT-TTGCTT-TAAGGGATCCCAGAAAATGATTTTGTTCATATATGATGAACA 1422 Query 1431 -TTAGTA-T-T-CTTTTAAGTTGTGGTTTCAGA-TGTATGATATATATTCGTTAGGAATT 1485 |||||| | | ||| ||| ||||||||||||| ||||||| | ||| |||||||||||| Sbjct 1423 ATTAGTAGTATTCTTCTAATTTGTGGTTTCAGAATGTATGAAA-ATAATCGTTAGGAATT 1481 Query 1486 TTGTTTGTAAAAACAC 1501 |||||||||||||||| Sbjct 1482 TTGTTTGTAAAAACAC 1497 > AT3G12140.3 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein | chr3:3869069-3871713 REVERSE LENGTH=1535 Length=1535 Score = 573 bits (310), Expect = 2e-162 Identities = 788/1006 (78%), Gaps = 83/1006 (8%) Strand=Plus/Plus Query 326 AGGGCTAG-TTTCATTTGGATGGAAAGTATATGGTAGGT---CTACACATTAATATGGAA 381 |||| ||| |||| |||||||||||| | | | | | | ||||| | | |||||| | Sbjct 279 AGGGATAGCTTTCGTTTGGATGGAAATTCTCT-GAAACTAAACTACATAGTGATATGG-A 336 Query 382 G-CGCAGATTCAT-ATACTTGAGCAGGAAGCTTATTCTGCTGTATTAAGGGCTTTTCAAG 439 | | || |||||| | ||||||||||||||| ||| | ||||| |||||||||||| ||| Sbjct 337 GACACAAATTCATCA-ACTTGAGCAGGAAGCATATACCGCTGTTTTAAGGGCTTTTAAAG 395 Query 440 CACAGGCTGATG-AATTTTCTTGGGATAAA-CAAGACGTGATGA-CAAACCTACGTAAAG 496 | ||| |||||| | |||||||||| ||| ||| | |||| | | || | ||||||| Sbjct 396 CGCAGTCTGATGCGA-TTTCTTGGGAAAAAGAAAG-CTTGATAACCGAA-TTGCGTAAAG 452 Query 497 AATTGAGGA-TATCTGATGATGAAAACCGAGAACTGT-TGAACAATCTTC-ATAATGATG 553 |||||| || |||||||||||||| | ||||| || | | | | || |||| |||| Sbjct 453 AATTGA-GAGTATCTGATGATGAACATCGAGAGCT-TCT-CAGTAGGGTCAATAAGGATG 509 Query 554 AT-CTTATCAAAAGAATAAGAGATTCGAGACCTAGAGGTGGAAACCAGGTTGTTAGACAT 612 || | |||| | || |||||||||| ||||| |||| | || ||| || ||||||| Sbjct 510 ATAC-TATCCAGAGGATAAGAGATTGGAGACAGGGAGGCGCAAGCCAAATTACTAGACAT 568 Query 613 -C-A--A-TC--CC--TCGATGTTCTTCCTAGTCCGACCTTT-TCAGCTTCTCGAAAGAA 662 | | | || || | ||||||||||||||||| | |||| |||||| | |||||||| Sbjct 569 GCAACTATTCAGCCTTTTGATGTTCTTCCTAGTCCCA-CTTTCTCAGCTGCCCGAAAGAA 627 Query 663 ACAGAAGAC-GTTCCAATC--CT-ATCCGTCGATTGGTTCTACTAGAAATAAGTCGTTCA 718 |||||| || |||| ||| | |||| || |||||| | ||| |||||| ||| |||| Sbjct 628 ACAGAAAACATTTCC-ATCTTATAATCCATCAATTGGTGCGACTGGAAATAGGTCATTCA 686 Query 719 ATAA-C--C--GTGT--AGT---A-A-CAGCAAATGAACCCGCTGAAGCTCTTATTGGAA 766 |||| | | || | ||| | | ||| ||||||| | ||||||||||| || |||| Sbjct 687 ATAATCGTCTGGTATCCAGTGGCATATCAGGAAATGAATCTGCTGAAGCTCTGATCGGAA 746 Query 767 GAAAAGTGTGGACAAAATGGCCTGATGACAAC-AGCTTTTATGAAGCAGT-AGTGACACA 824 ||||||||||||||||||||||||| || ||| | ||| ||||||||| | | | || || Sbjct 747 GAAAAGTGTGGACAAAATGGCCTGAAGATAACCA-CTTCTATGAAGCAATTA-TAACCCA 804 Query 825 ATACAATGCAGATGAGGGGCGACATGCGTTGGTATATGACATAAACACAGCCAATGAGAC 884 ||||||||||||||||| || ||||| ||||| ||||| ||| || |||| ||||| || Sbjct 805 GTACAATGCAGATGAGGGTCGGCATGCTTTGGTGTATGATATACACGCAGCTAATGAAAC 864 Query 885 GTGGGAATGGGTTGATCTTAAGGAGATTCCACCGGAAGATATAAGATGGGATGGAGAGGA 944 |||||||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||| Sbjct 865 GTGGGAATGGGTTGATCTCAAGGAGATACCACCGGAAGACATAAGATGGGATGGGGAGGA 924 Query 945 GAATGGGGTAACTTTAAATGTAGGACATGGCGGTGGAACAACCCGTGGGAATC-GAAGAA 1003 || ||||||| ||||||| | |||||||| ||| | | |||||| || | ||||| Sbjct 925 GAGTGGGGTAGCTTTAAACATTGGACATGGAAGTGCATCCTTCCGTGGCAA-CAGAAGAG 983 Query 1004 -CCTTAAGCCATGGTGGTAGAGGGAGAGGTCCAAGAA--C-TCAGCCAAGAAGAGAACAT 1059 || || ||||||||||||||||||||| ||||||| | ||| |||||||| |||| | Sbjct 984 GCCA-AATCCATGGTGGTAGAGGGAGAGGACCAAGAATTCATCAACCAAGAAGGGAAC-T 1041 Query 1060 T-TA--GCAACGGA-A-AAC-G---G-T-G-G-TGGGAGGA-AGTTTT-TC-GATGAGAT 1103 | || || || | | ||| | | | | | |||| ||| | || || ||||| || Sbjct 1042 TGTACCGCCACCAACACAACAGAATGGTAGTGGTGGGCGGAGAACTTCCTCTGATGATAT 1101 Query 1104 TGAATTGTTCAACACAGACTCACTTGTGAAAGAGGTGGAGAGAGTTTTTGATTCTAAC-C 1162 ||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||||| | | Sbjct 1102 TGAGTTGTTCAACACAGACTCGCTTGTGAAGGAGGTGGAGAGAGTTTTCGATTCTA-CGC 1160 Query 1163 TTCCTGATCCACAT-GAGCTTGATAAGGCCAAGAAACTACTCAAGGAACATGAACAGGCG 1221 ||||||||||| | ||||| || |||||||||||| | |||||||||||||||||||| Sbjct 1161 ATCCTGATCCAC-TCGAGCTCGACAAGGCCAAGAAAATGCTCAAGGAACATGAACAGGCA 1219 Query 1222 CTTATTGCTGCCATTGCAAGGCTTGCGGATGCTTCTGATTACGAAA 1267 || ||||||||||||||||||||||| ||| |||| ||| ||||| Sbjct 1220 CTCATTGCTGCCATTGCAAGGCTTGCTGATACTTCGGATGGCGAAA 1265 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74196405510 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5