BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487510 Length=1623 Score E Sequences producing significant alignments: (Bits) Value AT5G06950.1 | Symbols: AHBP-1B, TGA2 | bZIP transcription facto... 2457 0.0 AT3G12250.4 | Symbols: TGA6, BZIP45 | TGACG motif-binding facto... 1072 0.0 > AT5G06950.1 | Symbols: AHBP-1B, TGA2 | bZIP transcription factor family protein | chr5:2151025-2154553 FORWARD LENGTH=1649 Length=1649 Score = 2457 bits (1330), Expect = 0.0 Identities = 1555/1654 (94%), Gaps = 54/1654 (3%) Strand=Plus/Plus Query 1 GTCTCGGAGATTGGAATTTCGGATCGTGTCTCTCTCTGCTTCTTCTTTGTTTCAATCCGA 60 |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 1 GTCTCGGAGATTGGAATTTCGGATCGTGTCTCTCTCTG--T-TTCTTTGTTTCAATCCGA 57 Query 61 TTCCGAATCAAACCCTTTACTTCTGCTCC-TCAAAGATTTCGTTTTTCCAGCACAGCCAA 119 || |||||||| |||||||||| ||| || || ||||||||||||||||||| ||||||| Sbjct 58 TTTCGAATCAAGCCCTTTACTTGTGCACCTTC-AAGATTTCGTTTTTCCAGCGCAGCCAA 116 Query 120 TGGTCCGGATGATCAACATTTGTTCTTGATTCATTTCCTATTGATTCTTATTGTCTGTGC 179 || ||||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 117 TGCTCCGGGTGACCAACATTTGTTCCTGATTCATTTCCTATTGATTCGTATTGTCTGTGC 176 Query 180 ACACTAA-AG-AATTCTCAAGAAGTTGTTACTAAAAGAGAGGCCACAAGTGGATATTGTC 237 |||| || || |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 177 ACAC-AAGAGAAATT-TCAAGAAGTTGTTACTAAAAGAGAGGCCACAAGTGGATATTGTC 234 Query 238 TTTGTTATCAAGTGTTAGTACAGAAAAGTGGTGAGAAAGTAATATGGCTGATACCAGTCC 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 235 TTTGTTATCAAGTGTTAGTACAGAAAAGTGGTGAGAAAGTAATATGGCTGATACCAGTCC 294 Query 298 GCGAACTGATGTCTCAACAGATGAAGACACAGATCATCCTGATCTTGGGTCGGAGGGAGC 357 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 295 GAGAACTGATGTCTCAACAGATGACGACACAGATCATCCTGATCTTGGGTCGGAGGGAGC 354 Query 358 ACTAGTGAATAATGCTGCTTCTGATTCGAGTGACCGATCGAAGGGCAAGATGGATCAAAA 417 ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 355 ACTAGTGAATACTGCTGCTTCTGATTCGAGTGACCGATCGAAGGGAAAGATGGATCAAAA 414 Query 418 GACCCTTCGTAGGCTTGCTCAAAACCGTGAGGCAGCAAGGAAAAGCAGATTGAGGAAGAA 477 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 415 GACTCTTCGTAGGCTTGCTCAAAACCGTGAGGCAGCAAGGAAAAGCAGATTGAGGAAGAA 474 Query 478 GGCGTATGTTCAGCAGCTGGAGAACAGCCGCTTGAAACTTACCCAGCTTGAGCAGGAGCT 537 ||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 475 GGCTTATGTTCAGCAGCTAGAGAACAGCCGCTTGAAACTAACCCAGCTTGAGCAGGAGCT 534 Query 538 GCAAAGAGCAAGACAGCAGGGCGTCTTCATTTCAAGCACAGGAGACCAAGCCCATGCTAC 597 |||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| Sbjct 535 GCAAAGAGCAAGACAGCAGGGCGTCTTCATTTCAGGCACAGGAGACCAGGCCCATTCTAC 594 Query 598 TGGTGGAAATGGTGCTTTGGCGTTTGATGCTGAACACTCACGGTGGCTGGAAGAAAAGAA 657 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct 595 TGGTGGAAATGGTGCTTTGGCGTTTGATGCTGAACATTCACGGTGGTTGGAAGAAAAGAA 654 Query 658 CAAGCAAATGAACGAGCTGAGGTCTGCTCTGAATGCGCATGCAGGTGATTCTGAGCTTCG 717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 655 CAAGCAAATGAACGAGCTGAGGTCTGCTCTGAATGCGCATGCAGGTGATTCTGAGCTTCG 714 Query 718 AATAATAGTCGATGGTGTGATGGCTCACTATGAAGAGCTTTTCAGGATAAAGAGCAATGC 777 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 715 AATAATAGTCGATGGTGTGATGGCTCACTATGAGGAGCTTTTCAGGATAAAGAGCAATGC 774 Query 778 AGCTAAGAATGATGTCTTTCACTTGCTATCTGGCATGTGGAAAACACCAGCTGAAAGATG 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 775 AGCTAAGAATGATGTCTTTCACTTGCTATCTGGCATGTGGAAAACACCAGCTGAGAGATG 834 Query 838 TTTCTTGTGGCTTGGTGGCTTTCGTTCATCCGAACTTCTCAAGCTTCTGGCGAATCAGTT 897 |||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 835 TTTCTTGTGGCTCGGTGGATTTCGTTCATCCGAACTTCTAAAGCTTCTGGCGAATCAGTT 894 Query 898 GGAGCCAATGACAGAGAGACAGTTGATGGGCATAAATAACTTGCAACAGACATCGCAGCA 957 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 895 GGAGCCAATGACAGAGAGACAGTTGATGGGCATAAATAACCTGCAACAGACATCGCAGCA 954 Query 958 GGCTGAAGATGCTTTGTCTCAAGGGATGGAGAGCTTACAACAGTCTCTAGCTGATACTTT 1017 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 955 GGCTGAAGATGCTTTGTCTCAAGGGATGGAGAGCTTACAACAGTCACTAGCTGATACTTT 1014 Query 1018 ATCGAGCGGGACTCTTGGTTCAAGCTCATCAGGGAATGTGGCGAGCTACATGGGTCAGAT 1077 |||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| Sbjct 1015 ATCGAGCGGGACTCTTGGTTCAAGTTCATCAGGGAATGTCGCAAGCTACATGGGTCAGAT 1074 Query 1078 GGCCATGGCAATGGGAAAGTTAGGTACCCTCGAAGGATTTATTCGCCAGGCTGATAATTT 1137 ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct 1075 GGCCATGGCAATGGGAAAGTTAGGTACACTCGAAGGATTTATCCGCCAGGCTGATAATTT 1134 Query 1138 GAGACTACAAACATTGCAACAGATGATAAGAGTATTAACAAC-ACGACAGTCAGCGCGTG 1196 |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| Sbjct 1135 GAGACTACAAACATTGCAACAGATGATAAGAGTATTAACAACGA-GACAGTCAGCACGTG 1193 Query 1197 CTCTACTTGCAATTCATGATTACTTCTCACGGCTACGAGCTCTTAGCTCCTTATGGCTTG 1256 ||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| Sbjct 1194 CTCTACTTGCAATACACGATTACTTCTCACGGCTACGAGCTCTAAGCTCCTTATGGCTTG 1253 Query 1257 CTCGACCCAGAGAGTGAAACTGTATTTTGGTCACTATCAGTCAGCTGTACAAAATCCATA 1316 |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 1254 CTCGACCCAGAGAGTGAAACTGTATTTTGGTCAC-AT--GTCAGCTGTACAAAATCCATA 1310 Query 1317 TGGGACACAAA-CCAGGAGAGACTATTAATCAACACTTGTCAGAGATTCTTCTTACCAAA 1375 ||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1311 TGG-ACACAAAACCAGGAGAGACTATTAATCAACACTTGTCAGA--TTCTTCTTACCAAA 1367 Query 1376 TCCATCAACAAATAAGCAAATTTCTGGGAAACAAA----T-T--------------CT-- 1414 ||||||||||||||||||||||||||||||||||| | | || Sbjct 1368 TCCATCAACAAATAAGCAAATTTCTGGGAAACAAAAGACTCTTTGTATGTAGGTTTCTTC 1427 Query 1415 -ACATGGTTGTGGTAATTCATGTTGTTTTAGCTGTAGCCTTCAGTTTTTAATTTAGCATT 1473 |||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||| Sbjct 1428 TACATGGTTGTGGTAATTCATGTTGTTTTAGTTGTAGTCATCAGTTTTTAATTTAGCATT 1487 Query 1474 TAAAAAGTTCAATGTT-TATATAT--CATCTTCGATTATCTTAGAAAGGTTATTGAAttt 1530 | |||||||||||||| | ||||| |||||||||||||||||||||||||||||||||| Sbjct 1488 TGAAAAGTTCAATGTTGTTTATATAGCATCTTCGATTATCTTAGAAAGGTTATTGAATTT 1547 Query 1531 ttgtttgttttttttttGTTACTTT-GTGTGTGGTAAAGGTGTTTTAACCTTGCAACTTC 1589 | |||| |||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct 1548 T-GTTT-TTTTTT----GTTACTTTTGTGTGTGGTAAAGGTGTTTTAACCTTGCAACTTC 1601 Query 1590 TGTACTTGTAATCATCATTTAACAATATAAAGAT 1623 |||||| |||||||| || |||||||| ||||| Sbjct 1602 TGTACT-GTAATCAT--TT-AACAATATTAAGAT 1631 > AT3G12250.4 | Symbols: TGA6, BZIP45 | TGACG motif-binding factor 6 | chr3:3906351-3908583 FORWARD LENGTH=1068 Length=1068 Score = 1072 bits (580), Expect = 0.0 Identities = 800/908 (88%), Gaps = 8/908 (1%) Strand=Plus/Plus Query 370 TGCTGCTTCTGATTCGAGTGACCGATCGAAGGGCAAGATGGATCAAAAGACCCTTCGTAG 429 |||||| |||||||| ||||| ||||| |||| ||| |||||||||||||||||||||| Sbjct 165 TGCTGCCTCTGATTCCAGTGATCGATCAAAGGATAAGTTGGATCAAAAGACCCTTCGTAG 224 Query 430 GCTTGCTCAAAACCGTGAGGCAGCAAGGAAAAGCAGATTGAGGAAGAAGGCGTATGTTCA 489 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 225 GCTTGCTCAAAATCGTGAGGCAGCAAGAAAAAGCAGATTGAGGAAGAAGGCGTATGTTCA 284 Query 490 GCAGCTGGAGAACAGCCGCTTGAAA-CTTACCCAGCTTGAGCAGGAGCTGCAAAGAGCAA 548 |||||||||||| || || || ||| || || || ||||||||||||||||||||||||| Sbjct 285 GCAGCTGGAGAATAGTCGATT-AAAGCTGACTCAACTTGAGCAGGAGCTGCAAAGAGCAA 343 Query 549 GACAGCAGGGCGTCTTCATTTCAAGCACAGGAGACCAAGCCCATGCTACTGGTGGAAATG 608 |||||||||| || ||||| ||||| ||||||||||||| ||| |||||||||| |||| Sbjct 344 GACAGCAGGGAGTTTTCATCTCAAGTTCAGGAGACCAAGCTCATTCTACTGGTGGCAATG 403 Query 609 GTGCTTTGGCGTTTGATGCTGAACACTCACGGTGGCTGGAAGAAAAGAACAAGCAAATGA 668 | |||||||| |||||||| ||||||||||| ||||| ||||||||||||| |||||||| Sbjct 404 GGGCTTTGGCATTTGATGCAGAACACTCACGATGGCTTGAAGAAAAGAACAGGCAAATGA 463 Query 669 ACGAGCTGAGGTCTGCTCTGAATGCGCATGCAGGTGATTCTGAGCTTCGAATAATAGTCG 728 |||||||||| ||||| |||||||| |||||||||||| ||||||| || ||||| || | Sbjct 464 ACGAGCTGAGATCTGCCCTGAATGCTCATGCAGGTGATACTGAGCTCCGGATAATTGTGG 523 Query 729 ATGGTGTGATGGCTCACTATGAAGAGCTTTTCAGGATAAAGAGCAATGCAGCTAAGAATG 788 |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 524 ATGGAGTGATGGCTCACTATGAGGAGCTTTTCAGGATTAAGAGCAATGCAGCTAAGAATG 583 Query 789 ATGTCTTTCACTTGCTATCTGGCATGTGGAAAACACCAGCTGAAAGATGTTTCTTGTGGC 848 ||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 584 ATGTCTTCCACTTGTTATCTGGAATGTGGAAAACACCAGCTGAGCGATGTTTCTTGTGGC 643 Query 849 TTGGTGGCTTTCGTTCATCCGAACTTCTCAAGCTTCTGGCGAATCAGTTGGAGCCAATGA 908 |||| || || || ||||||||||||||||||||||| ||||||||| | ||||| |||| Sbjct 644 TTGGCGGGTTCCGCTCATCCGAACTTCTCAAGCTTCTTGCGAATCAGCTAGAGCCCATGA 703 Query 909 CAGAGA-GACAGTTGATGGGCATAAATAACTTGCAACAGACATCGCAGCAGGCTGAAGAT 967 |||| | ||||| | |||||||| |||| |||||| ||||| ||||||||||| |||||| Sbjct 704 CAGA-ACGACAGGTAATGGGCATCAATAGCTTGCAGCAGACGTCGCAGCAGGCAGAAGAT 762 Query 968 GCTTTGTCTCAAGGGATGGAGAGCTTACAACAGTCTCTAGCTGATACTTTATCGAGCGGG 1027 ||||| ||||||||||||||||| ||||| || || ||||||||||||||||| || || Sbjct 763 GCTTTATCTCAAGGGATGGAGAGTTTACAGCAATCCCTAGCTGATACTTTATCCAGTGGA 822 Query 1028 ACTCTTGGTTCAAGCTCATCAGGG-AATGTGGCGAGCTACATGGGTCAGATGGCCATGGC 1086 ||||||||||| || ||||| || ||||| ||||||||||||||||||||||||||||| Sbjct 823 ACTCTTGGTTCCAGTTCATC-GGATAATGTCGCGAGCTACATGGGTCAGATGGCCATGGC 881 Query 1087 AATGGGAAAGTTAGGTACCCTCGAAGGATTTATTCGCCAGGCTGATAATTTGAGACTACA 1146 |||||| ||||||| |||||||||||||| || |||||||||||||| ||||| || || Sbjct 882 AATGGGGCAGTTAGGCACCCTCGAAGGATTCATACGCCAGGCTGATAACTTGAGGCTGCA 941 Query 1147 AACATTGCAACAGATGATAAGAGTATTAACAACACGACAGTCAGCGCGTGCTCTACTTGC 1206 |||| | ||||||||| | |||||||||||||||| |||||||| |||||||| ||||| Sbjct 942 AACACTACAACAGATGCTTCGAGTATTAACAACACGTCAGTCAGCTCGTGCTCTTCTTGC 1001 Query 1207 AATTCATGATTACTTC-TCACGGCTACGAGCTCTTAGCTCCTTATGGCTTGCTCGACCCA 1265 || || ||||| ||| || || |||| |||||||| ||||| |||||||| || || | Sbjct 1002 TATACACGATTA-TTCATCTCGATTACGTGCTCTTAGTTCCTTGTGGCTTGCCCGGCCAA 1060 Query 1266 GAGAGTGA 1273 |||||||| Sbjct 1061 GAGAGTGA 1068 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80170270365 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5