BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487514
Length=1463
Score E
Sequences producing significant alignments: (Bits) Value
AT5G06960.1 | Symbols: OBF5, TGA5 | OCS-element binding factor ... 1725 0.0
AT5G06950.1 | Symbols: AHBP-1B, TGA2 | bZIP transcription facto... 893 0.0
AT3G12250.4 | Symbols: TGA6, BZIP45 | TGACG motif-binding facto... 828 0.0
> AT5G06960.1 | Symbols: OBF5, TGA5 | OCS-element binding factor
5 | chr5:2154780-2157646 FORWARD LENGTH=1586
Length=1586
Score = 1725 bits (934), Expect = 0.0
Identities = 1009/1046 (96%), Gaps = 1/1046 (0%)
Strand=Plus/Plus
Query 253 ATCGGTTTTTGTCTGATGATTTAGTAACTGAGATTTGGAAG-AAAAGAAAAATGGGAGAT 311
|||||||||| ||||||||||||||||| ||||||| |||| ||||||||||||||||||
Sbjct 297 ATCGGTTTTTATCTGATGATTTAGTAACAGAGATTTTGAAGAAAAAGAAAAATGGGAGAT 356
Query 312 ACTAGTCCAAGAACATCAGTCTCAACAGATGGAGAGACAGATCATAATAACCTAATGTTC 371
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 357 ACTAGTCCAAGAACATCAGTCTCAACAGATGGAGACACTGATCATAATAACCTAATGTTC 416
Query 372 GATGAAGGGCATTTGGGTATTGGTGCTTCTGATTCTAGTGACCGTTCAAAGAGTAAAATG 431
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 417 GATGAAGGGCATTTGGGTATCGGTGCTTCTGATTCTAGTGACCGTTCAAAGAGTAAAATG 476
Query 432 GATCAAAAGACGCTTCGTAGGCTCGCTCAAAACCGTGAGGCTGCAAGGAAAAGCAGATTG 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477 GATCAAAAGACGCTTCGTAGGCTCGCTCAAAACCGTGAGGCTGCAAGGAAAAGCAGATTG 536
Query 492 AGGAAGAAAGCATATGTTCAGCAGCTAGAGAATAGCCGATTGAAGTTAACACAACTTGAG 551
|||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||
Sbjct 537 AGGAAGAAAGCATATGTTCAGCAGCTAGAGAACAGTCGATTGAAGCTAACACAACTTGAG 596
Query 552 CAGGAGCTGCAAAGAGCAAGGCAACAGGGTGTCTTTATCTCAAGCTCTGGAGACCAAGCC 611
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 597 CAGGAGCTACAAAGAGCACGGCAACAGGGTGTCTTTATCTCAAGCTCTGGAGACCAAGCC 656
Query 612 CATTCTACCACTGGAGATGGGGCAATGGCATTTGATGCAGAATACAGACGATGGCAGGAA 671
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 657 CATTCTACCGCTGGAGATGGGGCAATGGCATTTGATGTAGAATACAGACGATGGCAGGAA 716
Query 672 GATAAAAACAGACAGATGAAGGAGCTGAGTTCTGCTTTAGATTCTCACGCGACTGATTCT 731
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 717 GATAAAAACAGACAGATGAAGGAGCTGAGTTCTGCTATAGATTCTCACGCGACTGATTCT 776
Query 732 GAGCTTCGGATAATTGTAGATGGAGTAATAGCTCACTATGAGGAGCTTTACAGGATAAAA 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 GAGCTTCGGATAATTGTAGATGGAGTAATAGCTCACTATGAGGAGCTTTACAGGATAAAA 836
Query 792 GGCAACGCAGCTAAGAATGATGTCTTCCATTTATTATCGGGGATGTGGAAAACACCAGCT 851
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 837 GGCAACGCAGCTAAGAGTGATGTCTTCCATTTATTATCAGGGATGTGGAAAACCCCAGCT 896
Query 852 GAGAGATGTTTCTTGTGGCTCGGTGGTTTCCGTTCATCAGAACTTCTCAAGCTTATAGCG 911
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 897 GAGAGATGTTTCTTGTGGCTCGGCGGTTTCCGTTCATCAGAACTTCTCAAGCTTATAGCG 956
Query 912 AATCAGTTGGAGCCGTTGACAGAACAACAATCACTAGACATAAATAACTTGCAACAGTCT 971
| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 957 AGTCAGTTGGAGCCCTTGACAGAACAACAATCGCTAGACATAAATAACTTGCAACAGTCT 1016
Query 972 TCTCAACAAGCAGAAGATGCTTTGTCTCAAGGGATGGATAACTTACAGCAATCACTCGCT 1031
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1017 TCTCAGCAAGCAGAAGATGCTTTGTCTCAAGGGATGGACAACTTACAGCAATCACTCGCT 1076
Query 1032 GATACTTTATCGAGCGGGACTCTCGGTTCGAGTTCATCAGGGAATGTAGCTGGCTACATG 1091
|||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 1077 GATACTTTATCGAGTGGGACTCTCGGTTCAAGTTCATCAGGGAATGTAGCTAGCTACATG 1136
Query 1092 GGTCAGATGGCCATGGCTATGGGGAAGTTAGGTACTCTTGAAGGATTTATCCGCCAGGCT 1151
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1137 GGTCAGATGGCCATGGCGATGGGGAAGTTAGGTACCCTTGAAGGATTTATCCGCCAGGCT 1196
Query 1152 GATAACTTAAGGCTACAAACATATCAACAAATGGTAAGAATATTAACAACCCGACAATCG 1211
||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||
Sbjct 1197 GATAACTTAAGGCTACAAACATATCAACAGATGGTGAGACTATTAACAACCCGACAATCG 1256
Query 1212 GCGCGTGCTCTCCTAGCAGTACACAATTATTCATTGCGGTTACACGCTCTTAGCTCTCTA 1271
|| ||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 1257 GCTCGTGCTCTCCTTGCAGTACACAATTATACATTGCGGTTACGTGCTCTTAGCTCTCTA 1316
Query 1272 TGGCTTGCCAGACCAAGAGAGTGAAC 1297
||||||||||||||||||||||||||
Sbjct 1317 TGGCTTGCCAGACCAAGAGAGTGAAC 1342
Score = 231 bits (125), Expect = 1e-59
Identities = 152/164 (93%), Gaps = 6/164 (4%)
Strand=Plus/Plus
Query 1 TTCGTCTTCCATTCCTGTTTTGTTTCAGAGACCGGGAAAATAAAATAAAAAGAAGATCGT 60
||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||
Sbjct 9 TTCGTCTTCCATTCCTGTTTTTTTTCAGAGACCGGCAAAATAAAA-AAAAAGAAGATCGT 67
Query 61 ACAAACT-AAAATACCTCAAAGAAGGTAGAGACAAAAGTAGTAACCTTTGTTGTTGATTG 119
|| |||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||
Sbjct 68 AC-AACTAAAAATACCTCAAAGAAGGAAGATACAAAAGTAGTAACCTTTGTTGGTGATTG 126
Query 120 ATATTCATATCTG--GTGGGTTTTAGACAAAGACCACGTCTTTG 161
||| | ||||||| |||||||||||||||||||||||||||||
Sbjct 127 ATACT-ATATCTGTTGTGGGTTTTAGACAAAGACCACGTCTTTG 169
> AT5G06950.1 | Symbols: AHBP-1B, TGA2 | bZIP transcription factor
family protein | chr5:2151025-2154553 FORWARD LENGTH=1649
Length=1649
Score = 893 bits (483), Expect = 0.0
Identities = 849/1022 (83%), Gaps = 40/1022 (4%)
Strand=Plus/Plus
Query 295 AAAGAAAAATGGGAGATACTAGTCCAAGAACATCA-GTCTCAACAGATGGA-GAGACAGA 352
|||| || |||| ||||| ||||| ||||| | | |||||||||||| || || |||||
Sbjct 270 AAAGTAATATGGCTGATACCAGTCCGAGAAC-TGATGTCTCAACAGAT-GACGACACAGA 327
Query 353 TCATAATAACCTAAT-GTTCGATGAAGG-GCA-T-TTGGGTATTGGTGCTTCTGATTCTA 408
|||| | | || | | ||| || || ||| | || || || |||||||||||| |
Sbjct 328 TCATCCTGATCT--TGGGTCG--GAGGGAGCACTAGTGAATACTGCTGCTTCTGATTCGA 383
Query 409 GTGACCGTTCAAAGAGTAAA-ATGGATCAAAAGACGCTTCGTAGGCTCGCTCAAAACCGT 467
||||||| || ||| | ||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct 384 GTGACCGATCGAAG-GGAAAGATGGATCAAAAGACTCTTCGTAGGCTTGCTCAAAACCGT 442
Query 468 GAGGCTGCAAGGAAAAGCAGATTGAGGAAGAAAGCATATGTTCAGCAGCTAGAGAATAGC 527
||||| |||||||||||||||||||||||||| || |||||||||||||||||||| |||
Sbjct 443 GAGGCAGCAAGGAAAAGCAGATTGAGGAAGAAGGCTTATGTTCAGCAGCTAGAGAACAGC 502
Query 528 CGATTGAAGTTAACACAACTTGAGCAGGAGCTGCAAAGAGCAAGGCAACAGGGTGTCTTT 587
|| ||||| |||| || |||||||||||||||||||||||||| || ||||| |||||
Sbjct 503 CGCTTGAAACTAACCCAGCTTGAGCAGGAGCTGCAAAGAGCAAGACAGCAGGGCGTCTTC 562
Query 588 ATCTCAAGCTCTGGAGACCAAGCCCATTCTACCACTGGAGATGGGGCAATGGCATTTGAT 647
|| ||| || | |||||||| ||||||||||| |||| |||| || |||| ||||||
Sbjct 563 ATTTCAGGCACAGGAGACCAGGCCCATTCTACTGGTGGAAATGGTGCTTTGGCGTTTGAT 622
Query 648 GCAGAATACAGACGATGGCAGGAAGATAAA-AAC-AGACAGATGAAGGAGCTGAGTTCTG 705
|| ||| | ||| ||| |||||| ||| ||| || || ||||| |||||||| ||||
Sbjct 623 GCTGAACATTCACGGTGGTTGGAAGA-AAAGAACAAG-CAAATGAACGAGCTGAGGTCTG 680
Query 706 CT-TTAGATTCTCACGCGA-CTGATTCTGAGCTTCGGATAATTGTAGATGGAGTAATAGC 763
|| | | || | || || | ||||||||||||||| ||||| || ||||| || || ||
Sbjct 681 CTCTGA-ATGCGCATGC-AGGTGATTCTGAGCTTCGAATAATAGTCGATGGTGTGATGGC 738
Query 764 TCACTATGAGGAGCTTTACAGGATAAAAG-GCAACGCAGCTAAGAATGATGTCTTCCATT 822
||||||||||||||||| |||||| |||| |||| |||||||||||||||||||| || |
Sbjct 739 TCACTATGAGGAGCTTTTCAGGAT-AAAGAGCAATGCAGCTAAGAATGATGTCTTTCACT 797
Query 823 TATTATCGGGGATGTGGAAAACACCAGCTGAGAGATGTTTCTTGTGGCTCGGTGG-TTTC 881
| |||| || |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 798 TGCTATCTGGCATGTGGAAAACACCAGCTGAGAGATGTTTCTTGTGGCTCGGTGGATTTC 857
Query 882 CGTTCATCAGAACTTCTCAAGCTTATAGCGAATCAGTTGGAGCCGTTGACAGA-ACAACA 940
||||||| |||||||| |||||| | ||||||||||||||||| ||||||| | | ||
Sbjct 858 -GTTCATCCGAACTTCTAAAGCTTCTGGCGAATCAGTTGGAGCCAATGACAGAGAGA-CA 915
Query 941 ATC-ACTAGACATAAATAACTTGCAACAGTCTTCTCAACAAGCAGAAGATGCTTTGTCTC 999
| | | | |||||||||| |||||||| | || || || || ||||||||||||||||
Sbjct 916 GTTGA-TGGGCATAAATAACCTGCAACAGACATCGCAGCAGGCTGAAGATGCTTTGTCTC 974
Query 1000 AAGGGATGGATAACTTACAGCAATCACTCGCTGATACTTTATCGAGCGGGACTCTCGGTT 1059
|||||||||| | |||||| || ||||| |||||||||||||||||||||||||| ||||
Sbjct 975 AAGGGATGGAGAGCTTACAACAGTCACTAGCTGATACTTTATCGAGCGGGACTCTTGGTT 1034
Query 1060 CGAGTTCATCAGGGAATGTAGCTGGCTACATGGGTCAGATGGCCATGGCTATGGGGAAGT 1119
| ||||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||
Sbjct 1035 CAAGTTCATCAGGGAATGTCGCAAGCTACATGGGTCAGATGGCCATGGCAATGGGAAAGT 1094
Query 1120 TAGGTACTCTTGAAGGATTTATCCGCCAGGCTGATAACTTAAGGCTACAAACATAT-CAA 1178
||||||| || |||||||||||||||||||||||||| || || |||||||||| | |||
Sbjct 1095 TAGGTACACTCGAAGGATTTATCCGCCAGGCTGATAATTTGAGACTACAAACAT-TGCAA 1153
Query 1179 CAAATGGTAAGAATATTAACAACCCGACAATCGGCGCGTGCTCTCCTAGCAGTACACAAT 1238
|| ||| ||||| |||||||||| |||| || || |||||||| || ||| ||||| ||
Sbjct 1154 CAGATGATAAGAGTATTAACAACGAGACAGTCAGCACGTGCTCTACTTGCAATACACGAT 1213
Query 1239 TA-TTCATTGCGGTTAC-ACGCTCTTAGCTCTCT-ATGGCTTGC-CAGACCAAGAGAGTG 1294
|| ||| | ||| ||| | ||||| ||||| || ||||||||| | |||| ||||||||
Sbjct 1214 TACTTC-TCACGGCTACGA-GCTCTAAGCTC-CTTATGGCTTGCTC-GACCCAGAGAGTG 1269
Query 1295 AA 1296
||
Sbjct 1270 AA 1271
> AT3G12250.4 | Symbols: TGA6, BZIP45 | TGACG motif-binding factor
6 | chr3:3906351-3908583 FORWARD LENGTH=1068
Length=1068
Score = 828 bits (448), Expect = 0.0
Identities = 764/915 (83%), Gaps = 28/915 (3%)
Strand=Plus/Plus
Query 395 TGCTTCTGATTCTAGTGACCGTTCAAA-GAGTAAAATGGATCAAAAGACGCTTCGTAGGC 453
||| |||||||| ||||| || ||||| || ||| ||||||||||||| ||||||||||
Sbjct 168 TGCCTCTGATTCCAGTGATCGATCAAAGGA-TAAGTTGGATCAAAAGACCCTTCGTAGGC 226
Query 454 TCGCTCAAAACCGTGAGGCTGCAAGGAAAAGCAGATTGAGGAAGAAAGCATATGTTCAGC 513
| |||||||| |||||||| ||||| |||||||||||||||||||| || ||||||||||
Sbjct 227 TTGCTCAAAATCGTGAGGCAGCAAGAAAAAGCAGATTGAGGAAGAAGGCGTATGTTCAGC 286
Query 514 AGCTAGAGAATAGCCGATTGAAGTTAACACAACTTGAGCAGGAGCTGCAAAGAGCAAGGC 573
|||| |||||||| ||||| ||| | || ||||||||||||||||||||||||||||| |
Sbjct 287 AGCTGGAGAATAGTCGATTAAAGCTGACTCAACTTGAGCAGGAGCTGCAAAGAGCAAGAC 346
Query 574 AACAGGGTGTCTTT-ATCTCAAGCTCTGGAGACCAAGCCCATTCTACCACTGG-AGATGG 631
| ||||| || ||| |||||||| || ||||||||||| |||||||| ||| | ||||
Sbjct 347 AGCAGGGAGT-TTTCATCTCAAGTTCAGGAGACCAAGCTCATTCTACTGGTGGCA-ATGG 404
Query 632 GGCAATGGCATTTGATGCAGAATACAGACGATGGCAGGAAGATAAA-AACAGACAGATGA 690
||| ||||||||||||||||| || |||||||| ||||| ||| ||||| || ||||
Sbjct 405 GGCTTTGGCATTTGATGCAGAACACTCACGATGGCTTGAAGA-AAAGAACAGGCAAATGA 463
Query 691 AGGAGCTGAGTTCTGCTTTAGATT-CTCACGC-GACTGATTCTGAGCTTCGGATAATTGT 748
| |||||||| ||||| | || | |||| || | |||| ||||||| |||||||||||
Sbjct 464 ACGAGCTGAGATCTGCCCT-GAATGCTCATGCAGG-TGATACTGAGCTCCGGATAATTGT 521
Query 749 AGATGGAGTAATAGCTCACTATGAGGAGCTTTACAGGATAAA-AGGCAACGCAGCTAAGA 807
|||||||| || ||||||||||||||||||| |||||| || || ||| ||||||||||
Sbjct 522 GGATGGAGTGATGGCTCACTATGAGGAGCTTTTCAGGATTAAGAG-CAATGCAGCTAAGA 580
Query 808 ATGATGTCTTCCATTTATTATCGGGGATGTGGAAAACACCAGCTGAGAGATGTTTCTTGT 867
||||||||||||| || ||||| || ||||||||||||||||||||| ||||||||||||
Sbjct 581 ATGATGTCTTCCACTTGTTATCTGGAATGTGGAAAACACCAGCTGAGCGATGTTTCTTGT 640
Query 868 GGCTCGGTGGTTTCCGTTCATCAGAACTTCTCAAGCTTATAGCGAATCAGTTGGAGCCGT 927
|||| || || ||||| ||||| ||||||||||||||| | ||||||||| | |||||
Sbjct 641 GGCTTGGCGGGTTCCGCTCATCCGAACTTCTCAAGCTTCTTGCGAATCAGCTAGAGCCCA 700
Query 928 TGACAGAACAACAA-TCACTAGACATAAATAACTTGCAACAGTCTTCTCAACAAGCAGAA 986
||||||||| ||| | | | | ||| |||| |||||| ||| | || || || ||||||
Sbjct 701 TGACAGAACGACAGGTAA-TGGGCATCAATAGCTTGCAGCAGACGTCGCAGCAGGCAGAA 759
Query 987 GATGCTTTGTCTCAAGGGATGGATAACTTACAGCAATCACTCGCTGATACTTTATCGAGC 1046
|||||||| |||||||||||||| | ||||||||||| || |||||||||||||| ||
Sbjct 760 GATGCTTTATCTCAAGGGATGGAGAGTTTACAGCAATCCCTAGCTGATACTTTATCCAGT 819
Query 1047 GGGACTCTCGGTTCGAGTTCATCAGGG-AATGTAGCTG-GCTACATGGGTCAGATGGCCA 1104
|| ||||| ||||| |||||||| || ||||| || | |||||||||||||||||||||
Sbjct 820 GGAACTCTTGGTTCCAGTTCATC-GGATAATGTCGC-GAGCTACATGGGTCAGATGGCCA 877
Query 1105 TGGCTATGGGGAAGTTAGGTACTCTTGAAGGATTTATCCGCCAGGCTGATAACTTAAGGC 1164
|||| |||||| ||||||| || || |||||||| || ||||||||||||||||| ||||
Sbjct 878 TGGCAATGGGGCAGTTAGGCACCCTCGAAGGATTCATACGCCAGGCTGATAACTTGAGGC 937
Query 1165 TACAAACA-TATCAACAAATGGTAAGAATATTAACAACCCGACAATCGGCGCGTGCTCTC 1223
| |||||| || ||||| ||| | || |||||||||| || || || || ||||||||
Sbjct 938 TGCAAACACTA-CAACAGATGCTTCGAGTATTAACAACACGTCAGTCAGCTCGTGCTCTT 996
Query 1224 CTAGC-AGTACACAATTATTCAT-TGCGGTTACACGCTCTTAGCTCTCTA-TGGCTTGCC 1280
|| || | ||||| ||||||||| | || |||| |||||||| || || |||||||||
Sbjct 997 CTTGCTA-TACACGATTATTCATCT-CGATTACGTGCTCTTAGTTC-CTTGTGGCTTGCC 1053
Query 1281 AGACCAAGAGAGTGA 1295
| ||||||||||||
Sbjct 1054 CGGCCAAGAGAGTGA 1068
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72138183165
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5