BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487521
Length=1302
Score E
Sequences producing significant alignments: (Bits) Value
AT5G07010.1 | Symbols: ATST2A, ST2A | sulfotransferase 2A | chr... 1748 0.0
AT5G07000.1 | Symbols: ATST2B, ST2B | sulfotransferase 2B | chr... 1628 0.0
> AT5G07010.1 | Symbols: ATST2A, ST2A | sulfotransferase 2A | chr5:2174678-2176106
REVERSE LENGTH=1429
Length=1429
Score = 1748 bits (946), Expect = 0.0
Identities = 1220/1345 (91%), Gaps = 48/1345 (4%)
Strand=Plus/Plus
Query 1 ATGGCGACCTCAAGCATGAAGAGCATTCCAATGGCGATCCCAAGTTTCTCCATGTGTCAC 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 68 ATGGCTACCTCAAGCATGAAGAGCATTCCAATGGCGATCCCAAGTTTCTCCATGTGTCAC 127
Query 61 AAGCTCGAGCTCCTCAAGGAAGGCAAAA---GCAAAG-GCC--AA---GAAGATCATGAG 111
|||||||||||||| || |||||||||| || | | || || ||||| ||||
Sbjct 128 AAGCTCGAGCTCCTTAAAGAAGGCAAAACTCGCGACGTCCCGAAAGCCGAAGAAGATGAA 187
Query 112 GGGCTAAGCTACGAGTTCCAAGAGATGTTGGACTCTCTTCCTAAGGAGAGAGGTTGGAGA 171
|||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 188 GGGCTAAGCTGCGAGTTCCAAGAGATGTTGGATTCTCTTCCTAAGGAGAGAGGATGGAGA 247
Query 172 ACTCGTTACCTTTATCTATTCCAAGGGTTTTGGTGCCAAGCTAAGGAGATTCAAGCTATC 231
|||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |||
Sbjct 248 ACTCGTTACCTTTACCTATTCCAAGGGTTTTGGTGCCAAGCCAAAGAGATTCAAGCCATC 307
Query 232 ATGTCTTTCCAAAAACATTTCCAGTCCCTTC-CAAACGACGTCGTCCTCGCCACTATACC 290
||||||||||||||||||||||| |||| || |||||||||||| |||||||| |||||
Sbjct 308 ATGTCTTTCCAAAAACATTTCCAATCCC-TCGAAAACGACGTCGTTCTCGCCACCATACC 366
Query 291 TAAATCTGGTACAACCTGGTTAAAAGCTTTAACTTTCACTATCCTTAACCGTCACCGGTT 350
|||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 367 TAAATCCGGTACAACCTGGCTAAAAGCTTTAACTTTCACCATCCTTAACCGTCACCGGTT 426
Query 351 TGATCCGGTTTCCTTAAGTTCCGACCACCCTCTTCTCACATCCAACCCTCATGACCTCGT 410
|||||||||| ||| ||| || ||||||||||| |||| ||||||||||||||||| ||
Sbjct 427 TGATCCGGTTGCCTCGAGTACCAACCACCCTCTTTTCACTTCCAACCCTCATGACCTTGT 486
Query 411 ACCTTTCTTCGAGTACAAGCTTTACGCCAACGGAGATGTTCCCAATCTCTCGAGTCTAGC 470
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 487 ACCTTTCTTCGAGTACAAGCTTTACGCCAACGGAGATGTTCCCGATCTCTCGGGTCTAGC 546
Query 471 CAGTCCAAGAACATTCGCAACCCACATACCGTTCGGTTCCCTTATGGATTCGATCGAGAA 530
|||||||||||| |||||||||||| |||||||||||||||| | ||| ||||||||||
Sbjct 547 CAGTCCAAGAACGTTCGCAACCCACTTACCGTTCGGTTCCCTAAAGGAAACGATCGAGAA 606
Query 531 ACCCGGTGTGAAGGTCGTGTACTTATGCCGGAACCCGTTTGACACATTCATCTCCTCGTG 590
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 607 ACCCGGTGTGAAGGTCGTGTACTTGTGCCGGAACCCGTTTGACACATTCATCTCTTCGTG 666
Query 591 GCATTACATCAACAACATCAAATCCGAGTCAGTGAGCCCAGTCTTGCTAGACGAAGCTTT 650
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 667 GCATTACACCAACAACATCAAATCCGAGTCAGTGAGCCCAGTCTTGCTAGACCAAGCTTT 726
Query 651 TGATCTGTATTGCCGGGGAGTGATCGGGTTTGGCCCGTTTTGGGAACACATGTTGGGATA 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 727 TGATCTGTATTGCCGGGGAGTGATCGGGTTTGGCCCGTTTTGGGAACACATGTTGGGATA 786
Query 711 CTGGAGAGAGAGCTTGAAGAGGCCAGAGAAAGTCTTATTTTTAAAGTACGAGGATCTCAA 770
||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||
Sbjct 787 CTGGAGAGAGAGCTTGAAGAGACCAGAGAAAGTCTTCTTTTTAAGGTACGAGGATCTCAA 846
Query 771 AGAAGACATTGAAACCAACTTGAAGAAGCTTTCAAGTTTCTTAG-GACTTCCTTTCACCG 829
||| ||||| || ||||||||||||| |||| ||| |||||||| | |||||||||||||
Sbjct 847 AGACGACATCGAGACCAACTTGAAGAGGCTTGCAACTTTCTTAGAG-CTTCCTTTCACCG 905
Query 830 AAGAAGAGGAGCGAAAGGGAGTTGTGAAGGCTATTGCTGATCTGTGTAGCTTCGAGAATC 889
|||||||||| ||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct 906 AAGAAGAGGAACGAAAGGGAGTTGTGAAGGCTATCGCCGAGCTGTGTAGCTTCGAGAATC 965
Query 890 TGAAGAAGTTGGAGGTGAACAAGTCAAACAAATCCATCAAAAACTTTGAGAATCGATTCT 949
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct 966 TGAAGAAGTTGGAGGTGAACAAGTCAAACAAGTCGATCAAGAACTTTGAGAATCGATTCT 1025
Query 950 TGTTTAGGAAAGGAGAAGTGAGTGATTGGGTTAACTATTTGTCGCCTTCACAAGTGGAAA 1009
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1026 TGTTTCGGAAAGGAGAAGTGAGTGATTGGGTTAACTATTTGTCACCTTCACAAGTGGAAA 1085
Query 1010 GATTGTCAGCCTTAGTGGATGACAAGTTTGGTGGATCTGGTCTCACTTTCAGGTTGAGCT 1069
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1086 GATTGTCAGCCTTAGTGGATGACAAGTTAGGTGGATCTGGTCTCACTTTCAGGTTGAGCT 1145
Query 1070 AAAATATAAGGCCACGTGCCCACATTTCTACTCTTGTTTTGAGAGCCTA--A-A---G-- 1121
||| ||||||||||||||||| |||||||||||||||| |||| ||||| | | |
Sbjct 1146 AAA-TATAAGGCCACGTGCCCCCATTTCTACTCTTGTTCTGAGGGCCTACTATATACGTT 1204
Query 1122 --GC-A-GTT--G----T---ATTGTTGTTACAGATAGACAAT-GAAGCAACGTAACGTC 1167
|| | ||| | | |||||||||||||||||||| | ||||||||||||||||
Sbjct 1205 AAGCTAAGTTAAGGCAGTTGTATTGTTGTTACAGATAGACA-TCGAAGCAACGTAACGTC 1263
Query 1168 CACAATTAAGGTAATTTGTCGTTTCTATTTTTGTCAACATCGAAGTTTGTCGAGTTTCTA 1227
|| ||||||| ||||||||||||| |||||||||||||| ||||||||||||| ||| ||
Sbjct 1264 CATAATTAAGTTAATTTGTCGTTTTTATTTTTGTCAACACCGAAGTTTGTCGAATTTTTA 1323
Query 1228 TTTTATTAAATATCGTTTGTGTTTGCCA-TTATGTTCT-ATTTGTACTA---TC-----G 1277
||||||||||||||| |||| ||||| | ||||||| | |||| ||||| | |
Sbjct 1324 TTTTATTAAATATCGCTTGTTTTTGC-AGTTATGTTTTTATTTTTACTAGAGTATTATTG 1382
Query 1278 TTCATGTGTGTAGCTAAATGTATTG 1302
|||||||||| ||||||||||||||
Sbjct 1383 TTCATGTGTGAAGCTAAATGTATTG 1407
> AT5G07000.1 | Symbols: ATST2B, ST2B | sulfotransferase 2B | chr5:2171403-2172939
REVERSE LENGTH=1537
Length=1537
Score = 1628 bits (881), Expect = 0.0
Identities = 1110/1216 (91%), Gaps = 34/1216 (3%)
Strand=Plus/Plus
Query 10 TCAAGCATGAAGAGCATTCCAATGGCGATCCCAAGTTTCTCCATGTGTCACAAGCTCGAG 69
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 225 TCAAGCATAAAGAGCATTCCAATGGCGATCCCAAGTTTCTCCATGTGTCACAAGCCCGAG 284
Query 70 CTCCTCAAGGAAGGCAAAAGCAAAGGCCAAGAAGATCATGAGGGGCTAAGCTACGAGTTC 129
||||| ||||||||||||||| ||||||||||||| | || ||||||||||||||||||
Sbjct 285 CTCCTTAAGGAAGGCAAAAGCGAAGGCCAAGAAGA--A-GAAGGGCTAAGCTACGAGTTC 341
Query 130 CAAGAGATGTTGGACTCTCTTCCTAAGGAGAGAGGTTGGAGAACTCGTTACCTTTATC-T 188
||||||||||||||||||||||||||||||||||| |||||| |||||||||||| | |
Sbjct 342 CAAGAGATGTTGGACTCTCTTCCTAAGGAGAGAGGACGGAGAAATCGTTACCTTTA-CTT 400
Query 189 ATTCCAAGGGTTTTGGTGCCAAGCTAAGGAGATTCAAGCTATCATGTCTTTCCAAAAACA 248
||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 401 ATTCCAAGGGTTTCGGTGCCAAGCTAAGGAGATTCAAGCTATCACGTCTTTCCAAAAACA 460
Query 249 TTTCCAGTCCCTTCCAAACGACGTCGTCCTCGCCACTATACCTAAATCTGGTACAACCTG 308
||| |||||||||||| ||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 461 TTTTCAGTCCCTTCCAGACGACGTTGTCCTCGCCACCATACCTAAATCTGGCACAACCTG 520
Query 309 GTTAAAAGCTTTAACTTTCACTATCCTTAACCGTCACCGGTTTGATCCGGTTTCCT--T- 365
||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||| |
Sbjct 521 GTTAAAAGCTTTAACTTTCACCATCCTTACCCGTCATCGGTTTGATCCGGTTTCCTCATC 580
Query 366 AAGTTCCGACCACCCTCTTCTCACATCCAACCCTCATGACCTCGTACCTTTCTTCGAGTA 425
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 581 AAGTTCCGACCACCCTCTTCTCACATCCAACCCTCACGACCTCGTACCTTTCTTCGAGTA 640
Query 426 CAAGCTTTACGCCAACGGAGATGTTCCCAATCTCTCGAGTCTAGCCAGTCCAAGAACATT 485
||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct 641 CAAGCTTTACGCCAACGGAAATGTTCCCGATCTCTCGGGTCTAGCCAGTCCAAGAACATT 700
Query 486 CGCAACCCACATACCGTTCGGTTCCCTTATGGATTCGATCGAGAAACCCGGTGTGAAGGT 545
|||||||||| ||||||||||| |||||| ||||||| ||||||| ||| ||||||||||
Sbjct 701 CGCAACCCACGTACCGTTCGGTGCCCTTAAGGATTCGGTCGAGAATCCCAGTGTGAAGGT 760
Query 546 CGTGTACTTATGCCGGAACCCGTTTGACACATTCATCTCC-TCGTGGCATTACATCAACA 604
|||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 761 TGTGTACCTGTGCCGGAACCCGTTTGACACATTCATCTCCAT-GTGGCATTACATCAACA 819
Query 605 ACATCAAATCCGAGTCAGTGAGCCCAGTCTTGCTAGACGAAGCTTTTGATCTGTATTGCC 664
|||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 820 ACATCACTTCCGAGTCAGTGAGCGCAGTCTTGCTAGACGAAGCTTTTGATCTATATTGCC 879
Query 665 GGGG---AGTGATCGGGTTTGGCCCGTTTTGGGAACACATGTTGGGATACTGGAGAGAGA 721
|||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 880 GGGGATTACTGATCGGATTTGGCCCGTTTTGGGAACACATGTTGGGATACTGGAGAGAGA 939
Query 722 GCTTGAAGAGGCCAGAGAAAGTCTTATTTTTAAAGTACGAGGATCTCAAAGAAGACATTG 781
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 940 GCTTGAAGAGGCCAGAGAAAGTCTTATTTTTAAAGTACGAGGATCTCAAAGAAGACATCG 999
Query 782 AAACCAACTTGAAGAAGCTTTCAAGTTTCTTAGGACTTCCTTTCACCGAAGAAGAGGAGC 841
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 1000 AGACCAACTTGAAGAAGCTAGCAAGTTTCTTAGGACTTCCTTTCACCGAAGAAGAGGAAC 1059
Query 842 GAAAGGGAGTTGTGAAGGCTATTGCTGATCTGTGTAGCTTCGAGAATCTGAAGAAGTTGG 901
||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 1060 AAAAGGGAGTTGTGAAAGCTATCGCTGATCTGTGTAGCTTTGAGAATCTGAAGAAGTTGG 1119
Query 902 AGGTGAACAAGTCAAACAAATCCATCAAAAACTTTGAGAATCGATTCTTGTTTAGGAAAG 961
||||||||||||||| ||||| ||| | |||| |||||| || ||||||||||||||||
Sbjct 1120 AGGTGAACAAGTCAAGCAAATTGATCCAGAACTATGAGAACCGGTTCTTGTTTAGGAAAG 1179
Query 962 GAGAAGTGAGTGATTGGGTTAACTATTTGTCGCCTTCACAAGTGGAAAGATTGTCAGCCT 1021
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1180 GAGAAGTGAGTGATTTGGTTAACTATTTGTCGCCATCACAAGTGGAAAGATTGTCAGCCT 1239
Query 1022 TAGTGGATGACAAGTTTGGTGGATCTGGTCTCACTTTCAGGTTGAGCTAAAATATAAGGC 1081
|||||||||||||||| | ||||||||||||||||||||| ||||| |||| ||| ||||
Sbjct 1240 TAGTGGATGACAAGTTAGCTGGATCTGGTCTCACTTTCAGATTGAGTTAAA-TATGAGGC 1298
Query 1082 CACGTGCCCACATTTCTACTCTTGTTTTGAGAGCCTA-AA--G------G---------- 1122
||| ||||||||||| ||||| ||||||||| ||||| || | |
Sbjct 1299 CACCTGCCCACATTTATACTCCTGTTTTGAGGGCCTATAAAAGTTTTAAGTTAAGTGAAG 1358
Query 1123 -CAGTTGTATTGTTGTTACAGATAGACAATGAAGCAACGTAACGTCCACAATTAAGGTAA 1181
|||||||||| ||||||||||| |||||||| ||||||||||||||||| || || |||
Sbjct 1359 GCAGTTGTATTATTGTTACAGATGGACAATGATGCAACGTAACGTCCACACTTTAGTTAA 1418
Query 1182 TTTGTCGTTTCTATTT 1197
|||||||||| |||||
Sbjct 1419 TTTGTCGTTTTTATTT 1434
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64055895420
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5