BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487528
Length=1369
Score E
Sequences producing significant alignments: (Bits) Value
AT5G07080.1 | Symbols: | HXXXD-type acyl-transferase family pr... 2067 0.0
> AT5G07080.1 | Symbols: | HXXXD-type acyl-transferase family
protein | chr5:2200332-2202110 FORWARD LENGTH=1509
Length=1509
Score = 2067 bits (1119), Expect = 0.0
Identities = 1284/1365 (94%), Gaps = 5/1365 (0%)
Strand=Plus/Plus
Query 1 ATGTGATATAGAAATCGAGATGGGAAGCCAAGGCATAACTTCACCGAGTCCCTTGGTGGT 60
|||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||
Sbjct 3 ATGTGATATAGAAATCAAGATGGGAAGCCAAGGCATGAGTTCACCGAGTCCCTTGGTGGT 62
Query 61 GAAGAAATCGCAAGTGGTTATAGTGAAACCCTCAAAGGCAACCCCTGATGTCTCTCTTTC 120
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 63 GAAGAAATCGCAAGTGGTTATAGTGAAACCCTCAAAGGCTACACCTGATGTCTCTCTTTC 122
Query 121 TCTCTCGACATTCGACAATGATCCTTACCTCGAAACCCTCGCCAAAACCATCTATGTCTA 180
|||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 123 TCTCTCCACACTCGACAACGATCCTTATCTCGAAACCCTCGCCAAAACCATCTATGTCTA 182
Query 181 CG--CC-CCACCCCCGAACGACCACGTCCACGATCCAGCTTCCCTTTTTCAGCAAGCTCT 237
|| || ||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 CGCTCCACCATCCCCAAACGACCACGTCCACGATCCAGCTTCCCTTTTTCAGCAAGCTCT 242
Query 238 CTCTGATGCTCTTGTCTATTACTACCCTCTCGCTGGAAAACTTCACCGTGGATCCCACGA 297
|||||| || |||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 243 CTCTGACGCCCTTGTCTATTACTACCCTCTCGCTGGAAAACTTCACCGGGGATCACACGA 302
Query 298 CCATAGATTAGAGTTGAGGTGCAGTCCCGCGCAAGGAGTCCCCTTTGTTAGGGCGACCAC 357
||||||| |||| |||||||||||||||||| |||||||||||||||||||||| ||| |
Sbjct 303 CCATAGACTAGAATTGAGGTGCAGTCCCGCGGAAGGAGTCCCCTTTGTTAGGGCAACCGC 362
Query 358 GGACTGCACTCTCTCTTCCCTCAACTATTTGAAGGACATGGACGCTGACTTATACCAACT 417
||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 363 AGACTGTACTCTCTCTTCCCTCAACTATTTGAAGGACATGGACACTGACTTATACCAACT 422
Query 418 AGTACCTTGTGATGTAGCTGTGGCCTCTGGTGGTTACAACCCTCTGGCTTTGCAAATCAC 477
||||||||||||||||||| | ||||||| | ||||||||||||||||||||| |||||
Sbjct 423 CGTACCTTGTGATGTAGCTGCGCCCTCTGGCGATTACAACCCTCTGGCTTTGCAGATCAC 482
Query 478 TCTGTTTGCATGTGGAGGTCTCACTCTTGCAACGGCTCTCTCTCATTCCTTGTGTGATGG 537
| |||||||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||
Sbjct 483 TTTGTTTGCATGCGGAGGGCTCACTCTTGCTACGGCCCTCTCTCATTCCTTGTGTGATGG 542
Query 538 TTTTGGAGCGTCTCAGTTTTTCAAAGCCTTAACTGAGCTCGCCGCGGGAAATATACAACC 597
||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||
Sbjct 543 TTTTGGAGCGTCTCAGTTTTTCAAAACCTTAACTGAGCTCGCCGCGGGAAAAACACAACC 602
Query 598 TAGCATCATCCCCGTTTGGGAAAGACATCGTCTCACCTCTAACAACTTTAGCTTAAACGG 657
||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 603 TAGCATCATCCCCGTCTGGGACAGACATCGTCTCACTTCTAACAACTTTAGCTTAAACGA 662
Query 658 GCAAGTGGAGGAGGGACAAGCTCCCAAGCTGGTTGACTTCGGAGAGGCTTGCTCTTCTGT 717
||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct 663 CCAAGTGGAGGAGGGACAAGCTCCCAAGCTAGTTGATTTTGGAGAGGCTTGCTCTTCTGC 722
Query 718 GGCAACTTCCCCCTACACACCCA-CTAACGACATGGTATGTGAGATCCTCAACGTGACAT 776
||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 723 GGCAACTTCTCCCTACACACCCAGC-AACGACATGGTATGTGAGATCCTCAACGTGACAT 781
Query 777 CCCAAGAGATCACTCAGCTCAAGGAGAAGGTTGCGGGGGAGGTCACGACTCTAGAGATTC 836
|| |||| || ||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 782 CCGAAGATATTACTCAGCTCAAGGAGAAAGTTGCGGGGGTGGTCACGACTCTAGAGATTC 841
Query 837 TTGCAGCCCACGTCTGGAGAGCAAGGTGCCGAGCCTTGAAGCTAAGTCCAGATGGGACTT 896
|||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 842 TTGCGGCCCACGTCTGGAGAGCAAGGTGCCGGGCCTTGAAGTTAAGTCCAGATGGGACTT 901
Query 897 CTCTTTTCGGAATGGCTGTGGGTATACGCCGCATTGTGGAGCCACCGTTACCGGAAGGCT 956
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 902 CTCTTTTCGGAATGGCTGTGGGTATACGCCGCATTGTGGAGCCACCATTACCGGAAGGGT 961
Query 957 ACTACGGGAACGCATTTGTCAAAGCCAACGTAGCAATGAAGGCTGGAGAGTTGAGCAACT 1016
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 962 ACTACGGAAACGCATTTGTCAAAGCCAACGTAGCAATGAAGGCTGGAGAGTTAAGCAACT 1021
Query 1017 CACCGTTGTCTCACGTTGTTAAGCTCATTAAAGAAGCTAAGAAAGCGGCGCTGGAGAAGA 1076
|||||||||||||||||||| ||||||||||||| || ||||||||||| | ||||||||
Sbjct 1022 CACCGTTGTCTCACGTTGTTCAGCTCATTAAAGAGGCAAAGAAAGCGGCACAGGAGAAGA 1081
Query 1077 GGTACGTGTTGGAGCAGCTAAGAGAGACAGAGAAAACGTTGAAGATGAAGGTAGCGTGTG 1136
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1082 GGTACGTGTTGGAGCAGTTAAGAGAGACAGAGAAAACGTTGAAGATGAATGTAGCGTGTG 1141
Query 1137 AAGGAGGGAACGGAGCGTTCATGTTGCTTACTGATTGGAGGCAACTTGGATTGCTAGACG 1196
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1142 AAGGAGGGAAAGGAGCGTTCATGTTGCTTACTGATTGGAGGCAACTTGGATTGCTAGACG 1201
Query 1197 AAATTGATTTTGGGTATGGAGGATCGGTGAATATTATACCATTGGTTCCCAAGTATTTGC 1256
||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||
Sbjct 1202 AAATTGATTTTGGGTATGGAGGATCAGTGAATATTATACCATTGGTGCCCAAGTATCTGC 1261
Query 1257 CGGATATTTGCATTTTCTTGCCGAGGAAGCACGGTGGTGTTAGAGTGCTAGTCACGCTGC 1316
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1262 CGGATATTTGTATTTTCTTGCCGAGGAAGCAAGGTGGTGTTAGAGTGCTAGTCACGCTGC 1321
Query 1317 CTAAACCTGTAATGGACAACTTCAAGGAACACATGAATCCCCTAA 1361
| ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 1322 CCAAATCTGTAATGGTCAACTTCAAGGAACACATAAATCCCCTAA 1366
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67419331935
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5