BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487553 Length=3545 Score E Sequences producing significant alignments: (Bits) Value AT5G07280.1 | Symbols: EMS1, EXS | Leucine-rich repeat transmem... 5134 0.0 > AT5G07280.1 | Symbols: EMS1, EXS | Leucine-rich repeat transmembrane protein kinase | chr5:2285040-2288686 FORWARD LENGTH=3647 Length=3647 Score = 5134 bits (2780), Expect = 0.0 Identities = 3159/3346 (94%), Gaps = 10/3346 (0%) Strand=Plus/Plus Query 205 ATTCCGAAGGAGATTTCAACTTTGAAGAATCTCAAAGAGCTTCGTCTAGCCGGAAATCAA 264 ||||||||||| ||||| | ||||||||| || | ||||||| |||| |||||||||||| Sbjct 289 ATTCCGAAGGAAATTTCGAGTTTGAAGAACCTTAGAGAGCTTTGTCTTGCCGGAAATCAA 348 Query 265 TTCTCCGGGAAGATTCCGTCTGAGATTTGGAAACTAAAACAGCTTCAAACCCTAGACCTC 324 |||||||||||||||||| ||||||||||||| |||||||| || |||||||| |||||| Sbjct 349 TTCTCCGGGAAGATTCCGCCTGAGATTTGGAATCTAAAACATCTCCAAACCCTTGACCTC 408 Query 325 TCTGGAAACTCACTCACAGGACTGCTCCCGAGTCAACTCAGTGAGTTACATCAGCTTCTC 384 || ||||| || ||||| ||||| |||||||| | |||||||||||||| |||||||||| Sbjct 409 TCAGGAAATTCTCTCACCGGACTTCTCCCGAGGCTACTCAGTGAGTTACCTCAGCTTCTC 468 Query 385 TATCTTGACCTAAGTGACAACCACTTCTCCGGTTCACTTCCTCCGTCGTTCTTCCTCAGC 444 || || ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct 469 TACCTCGACCTTAGTGACAACCACTTCTCCGGTTCACTTCCTCCATCGTTCTTCATCAGC 528 Query 445 TTCCCTGCACTGTCTTCACTCGACGTCTCCAACAACTCTCTCTCCGGCGAAATCCCTCCA 504 || |||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 529 TTACCTGCACTGTCTTCTCTTGACGTCTCCAACAACTCTCTCTCCGGCGAAATCCCTCCT 588 Query 505 GAAATCGGGAAATTGAGTAACCTCTCTGACCTTTACATGGGACTCAACTCATTTTCCGGT 564 |||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 589 GAAATCGGGAAACTGAGTAACCTCTCCAATCTTTACATGGGACTCAACTCATTTTCCGGT 648 Query 565 CAAATCCCGCCGGAGGTTGGTAACATCTCGTTGCTGAAGAACTTTGGTGCACCTTCTTGC 624 ||||| ||| ||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 649 CAAATTCCGTCGGAGATTGGTAACATCTCGTTGCTGAAGAACTTTGCTGCACCTTCTTGC 708 Query 625 TTCTTCAAAGGACCGTTACCAAAGGAGATTTCGAAGCTGAAACACTTAGCAAAGCTCGAC 684 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 709 TTCTTCAATGGACCGTTACCAAAGGAGATTTCGAAACTGAAACACTTAGCAAAGCTCGAC 768 Query 685 CTTTCTTACAACCCACTCAAGTGTT-CAATCCCAAAATCGTTTGGGGAGTTGCAGAATCT 743 |||||||| || ||||||||||||| || |||| ||||||||||| |||||||| ||||| Sbjct 769 CTTTCTTATAATCCACTCAAGTGTTCCATTCCC-AAATCGTTTGGAGAGTTGCATAATCT 827 Query 744 GAGTATATTGAATCTTGTCTCCGCAGAGCTTATTGGATTGATCCCACCAGAGCTTGGTAA 803 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 828 GAGTATACTAAATCTTGTCTCCGCAGAGCTTATTGGATTGATCCCACCAGAGCTTGGTAA 887 Query 804 GTGTAAAAGCCTCAAGACACTGATGCTTTCTTTCAATTCTCTCTCTGGTTCTTTGCCATT 863 ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| Sbjct 888 TTGTAAAAGCCTCAAGTCACTGATGCTGTCTTTCAATTCTCTCTCTGGACCTTTGCCATT 947 Query 864 GGAGCTTTCAGAGATTCCTCTGTTGACGTTTTCTGCTGAAAGGAATCAGCTTTCGGGTTC 923 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 948 GGAGCTTTCAGAGATTCCTCTGTTGACGTTTTCTGCTGAAAGGAATCAGCTTTCGGGTTC 1007 Query 924 ATTGCCTTCATGGATCGGCAAATGGAAGGTACTGGACTCACTTCTGTTAGCTAACAATCG 983 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 1008 ATTGCCTTCATGGATGGGGAAATGGAAGGTACTGGACTCACTTCTGTTAGCTAACAATCG 1067 Query 984 GTTTTCAGGTGAAATCCCTCGTGAGATTGAGGATTGTCCAATGTTGAAGCATCTCAGTCT 1043 |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 1068 GTTTTCAGGTGAAATCCCTCATGAGATTGAGGATTGTCCAATGTTGAAACATCTCAGTCT 1127 Query 1044 AGCTAGCAACTTGTTAACTGGTTCGATTCCTAGGGAGCTTTGTGGTTCAGGTTCGTTGGA 1103 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 1128 AGCTAGCAACTTGTTAAGTGGTTCGATTCCTAGGGAGCTCTGTGGTTCAGGTTCGTTGGA 1187 Query 1104 GGAGATTGATCTCTCTGGGAATTTGCTTTCGGGAACAATTGAGGAGGTGTTCAATGGTTG 1163 || ||||||||||||||||||||||||||| ||||||||||||||||| || |||| || Sbjct 1188 GGCGATTGATCTCTCTGGGAATTTGCTTTCTGGAACAATTGAGGAGGTCTTTGATGGATG 1247 Query 1164 TTCGTCTCTTGTAGAGTTGGTT-CTTACCAATAATCAGATCAATGGCTCTATTCCTGAGG 1222 ||| ||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||||| Sbjct 1248 TTCCTCTCTTGGAGAGTT-GTTACTTACTAATAATCAGATCAATGGCTCTATTCCTGAGG 1306 Query 1223 ATCTTTCAAAGCTTCCATTGATGGCAGTTGACTTGGATTCCAACAACTTCACAGGAGAAA 1282 |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1307 ATCTTTGGAAGCTTCCATTGATGGCACTTGACTTGGATTCCAACAACTTCACAGGAGAAA 1366 Query 1283 TCCCAAAGAGTCTCTGGAAATCAACGAACTTGATGGAGTTCT-CAGCTTCTTATAATCGT 1341 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct 1367 TCCCAAAGAGTCTCTGGAAATCAACGAACTTGATGGAGTT-TACAGCTTCTTATAATCGT 1425 Query 1342 CTAGAAGGTTATTTGCCTGCAGAGATTGGTAATGCAGCTTCACTGACGCGGCTGGTTCTC 1401 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 1426 CTAGAAGGTTATTTGCCTGCAGAGATTGGTAATGCAGCTTCACTGAAGCGGTTGGTTCTC 1485 Query 1402 AGTGATAATCAGTTAAAAGGTGAAATCCCAAGAGAGATTGGAAAACTCACATCATTGTCT 1461 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 1486 AGTGATAATCAGTTAACAGGTGAAATCCCAAGAGAGATTGGAAAACTCACATCTTTGTCT 1545 Query 1462 GTCTTGAATCTGAATTCAAACAAGCTTCAAGGGAAGATACCAAACGAGCTTGGTGACTGT 1521 ||||||||||||||| |||||| | ||||||||||||||||| ||||| ||||| ||| Sbjct 1546 GTCTTGAATCTGAATGCAAACATGTTTCAAGGGAAGATACCAGTTGAGCTCGGTGATTGT 1605 Query 1522 ACTTGTTTGACTACATTGGATCTTGGCAACAACAATCTTCAAGGACAGATTCCAGACAGA 1581 |||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||| | Sbjct 1606 ACTTCTTTGACTACATTGGATCTAGGCAGCAACAATCTTCAAGGACAGATTCCAGACAAA 1665 Query 1582 ATCACTGGTCTTTCTCAGCTTCAATGCCTGGTTCTCTCTTACAACAATCTCTCAGGGTCA 1641 ||||||| ||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1666 ATCACTGCTCTCGCTCAGCTTCAGTGCCTGGTTCTCTCTTACAACAATCTCTCCGGGTCA 1725 Query 1642 ATTCCATCAAAACCCTCTGCTTATTTCCATCAGATTGACATGCCTGATCTTAGCTTTCTT 1701 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 1726 ATTCCATCAAAACCCTCTGCTTATTTCCATCAGATTGAGATGCCTGATCTCAGCTTTCTT 1785 Query 1702 CAGCACCATGGGATATTTGATCTCTCCTACAATAGATTGTCTGGCTCTATACCAGAAGAA 1761 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1786 CAGCACCATGGGATATTTGATCTCTCCTACAATAGATTGTCTGGCCCTATACCAGAAGAA 1845 Query 1762 CTTGGCGACTGTGTGGTATTGGTGGAGATTTTACTGAGCAACAACCATCTCTCTGGAGAG 1821 |||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct 1846 CTTGGCGAGTGTTTGGTATTGGTAGAGATTTCACTGAGCAACAACCATCTCTCTGGAGAG 1905 Query 1822 ATTCCAGCTTCACTCTCTCGTTTGACCAACCTCACAATCCTGGATCTATCTGGAAATGCA 1881 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1906 ATTCCAGCTTCACTCTCTCGTTTGACCAACCTCACAATCCTGGATCTATCTGGAAATGCA 1965 Query 1882 CTTACTGGATCTATTCCAAAGGAGATGGGCCACTCTCTTAAGTTGCAGGGATTAAACTTG 1941 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1966 CTGACTGGATCTATTCCAAAGGAGATGGGCAACTCTCTTAAGTTGCAGGGATTAAACTTG 2025 Query 1942 GCGAATAATCAGCTCAATGGCTATATACCAGAAAGCTTTGGTC-TGTTAGATAGCTTGGT 2000 ||||||||||||||||||||| |||| |||||||||||||| | |||||| ||||||||| Sbjct 2026 GCGAATAATCAGCTCAATGGCCATATTCCAGAAAGCTTTGG-CTTGTTAGGTAGCTTGGT 2084 Query 2001 GAAGCTAAACTTGACCAAGAACAAGCTGGATGGATCGGTTCCTGCTTCTCTTGGGAACTT 2060 ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| Sbjct 2085 GAAGCTAAACTTGACTAAGAACAAGCTTGATGGACCGGTTCCTGCTTCTCTTGGGAACTT 2144 Query 2061 GAAAGAGCTTACACACATGGACTTGAGCTTTAACAACCTAAGTGGCGAGCTTTCATCAGA 2120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2145 GAAAGAGCTTACACACATGGACTTGAGCTTTAACAACCTAAGTGGCGAGCTTTCATCAGA 2204 Query 2121 ACTGTCTACAATGGTCAAACTTGTAGGCCTCTACATTGAGCAGAATAAGTTCACCGGAGA 2180 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| || Sbjct 2205 ACTGTCTACAATGGAAAAACTTGTCGGCCTCTACATTGAGCAGAATAAGTTCACCGGGGA 2264 Query 2181 AATACCGTCAGAACTTGGTAATCTTACACAGCTGGAGTACCTTGATGTTTCTGAGAACTT 2240 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2265 AATACCTTCAGAACTTGGTAATCTTACGCAGCTGGAGTACCTTGATGTTTCTGAGAACTT 2324 Query 2241 GCTATCTGGAGAAATCCCAACAAAGATCTGTGGATTGCCCAATCTGGAGTTCTTGAATCT 2300 | |||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2325 GTTATCTGGAGAGATACCAACAAAGATCTGTGGATTGCCCAATCTGGAGTTCTTGAATCT 2384 Query 2301 AGCCAAGAACAATCTGCGAGGAGAGGTGCCGAGTGATGGTGTTTGCCAGGATCCTTCCAA 2360 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2385 AGCCAAGAACAATCTGCGAGGAGAGGTGCCGAGTGATGGTGTTTGTCAGGATCCTTCCAA 2444 Query 2361 GGCATTGCTTTCAGGGAACAAAGAGTTGTGTGGCAGAGTTATTGGATCAGATTGCAAGAT 2420 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 2445 GGCATTGCTTTCAGGGAACAAAGAGTTGTGTGGCAGAGTGGTTGGATCAGATTGCAAGAT 2504 Query 2421 CGATGGAACTAAGTTGACTCA-TGCTTGGGGGATTGCAGGACTCATGCTTGGTTTTACGA 2479 ||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct 2505 CGAGGGAACTAAGTTGA-GGAGTGCTTGGGGGATTGCAGGACTCATGCTTGGCTTTACGA 2563 Query 2480 TCATCGTCTTTGTGTTTGTATTCTCTCTGCGCAGATGGGTTATGACAAAGAGAGTGAAGC 2539 ||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 2564 TCATCGTTTTTGTGTTTGTTTTCTCTCTGCGCAGATGGGCTATGACAAAGAGAGTGAAGC 2623 Query 2540 AAAGAGATGATCCAGAGCGAATGGAGGAAAGCAGGTTAAAAGGGTTTGTTGATCAGAACC 2599 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 2624 AAAGAGATGATCCAGAGCGAATGGAGGAAAGCAGATTGAAAGGGTTTGTTGATCAGAACC 2683 Query 2600 TGTATTTCTTAAGTGGAAGCAGATCAAGAGAGCCATTAAGCATCAATATAGCAATGTTCG 2659 |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 2684 TGTATTTCTTAAGTGGAAGCAGATCAAGGGAGCCTTTAAGCATCAATATAGCAATGTTCG 2743 Query 2660 AGCAGCCGCTTTTGAAGGTGCGTTTAGGAGATATTGTCGAGGCTACAGATCATTTCTCTA 2719 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2744 AGCAGCCGCTTCTGAAGGTGCGTTTAGGAGATATTGTCGAGGCTACAGATCATTTCTCTA 2803 Query 2720 AGAAGAACATTATAGGAGACGGTGGTTTTGGGACGGTTTACAAAGCTTGTTTACCAGGTG 2779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2804 AGAAGAACATTATAGGAGACGGTGGTTTTGGGACGGTTTACAAAGCTTGTTTACCAGGTG 2863 Query 2780 GGAAAACAGTAGCGGTGAAGAAGCTAAGTGAAGCCAAAACTCAGGGAAACCGGGAATTCA 2839 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 2864 AGAAAACAGTAGCGGTGAAGAAGCTAAGTGAAGCCAAAACGCAGGGAAACCGAGAATTCA 2923 Query 2840 TGGCAGAGATGGAGACTCTAGGGAAAGTGAAGCATCCGAATCTTGTGTCTTTGCTTGGAT 2899 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2924 TGGCAGAGATGGAGACTCTAGGGAAAGTGAAGCATCCGAATCTTGTGTCTTTGCTTGGAT 2983 Query 2900 ATTGTTCTTTCAGTGAAGAGAAGCTTCTGGTATATGAGTATATGGTTAATGGAAGCTTAG 2959 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2984 ATTGCTCTTTCAGTGAAGAGAAGCTTCTGGTATATGAGTATATGGTAAATGGAAGCTTAG 3043 Query 2960 ATCACTGGTTAAGGAACCAAACTGGGATGCTAGAGGTTCTGGACTGGTCAAAACGCCTCA 3019 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3044 ATCACTGGTTAAGGAACCAAACTGGGATGCTAGAGGTTCTGGACTGGTCAAAACGCCTCA 3103 Query 3020 AAATCGCAGTTGGAGCTGCAAGAGGTCTTGCTTTCCTACATCACGGTTTCATCCCTCACA 3079 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 3104 AAATCGCAGTTGGAGCTGCAAGAGGTCTAGCTTTCCTACATCACGGTTTCATCCCTCACA 3163 Query 3080 TTATACATAGGGACATCAAAGCCAGCAACATTCTCTTAGATGGTGATTTTGAGCCTAAGG 3139 ||||||| |||||||||||||| ||||||||||| ||||||||||||||||| || |||| Sbjct 3164 TTATACACAGGGACATCAAAGCGAGCAACATTCTGTTAGATGGTGATTTTGAACCAAAGG 3223 Query 3140 TGGCGGATTTCGGGCTAGCAAGACTAATTAGTGCCTGTGAATCCCATGTTAGTACAGTCA 3199 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3224 TGGCGGATTTTGGGCTAGCAAGACTAATTAGTGCCTGTGAATCCCATGTTAGTACAGTCA 3283 Query 3200 TCGCAGGGACTTTCGGGTATATCCCACCGGAGTATGGTCAGAGCGCAAGAGCCACAACCA 3259 | ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 3284 TAGCAGGGACTTTCGGGTATATCCCACCGGAGTATGGTCAGAGTGCCCGAGCCACAACCA 3343 Query 3260 AAGGGGATGTCTACAGCTTTGGAGTGATTCTGTTAGAACTAGTCACAGGGAAAGAGCCGA 3319 |||| |||||||| |||||||| ||||| || || || || ||||||||||||||||| | Sbjct 3344 AAGGAGATGTCTATAGCTTTGGCGTGATACTATTGGAGCTTGTCACAGGGAAAGAGCCAA 3403 Query 3320 CCGGTCCAGACTTCAAAGAGAGTGAAGGAGGAAACTTGGTTGGTTGGGTGACTCGGAAGA 3379 ||||||||||||| || |||||||||||||| |||||||||||||||| || || ||||| Sbjct 3404 CCGGTCCAGACTTTAAGGAGAGTGAAGGAGGGAACTTGGTTGGTTGGGCGATTCAGAAGA 3463 Query 3380 TTAACCAAGGGAAAGCGGTGGATGTTCTTGACCCACTGCTTGTATCTGTGGCCTTGAAGA 3439 | |||||||||||||| ||||||||| |||| |||||||| ||||||||||| ||||||| Sbjct 3464 TCAACCAAGGGAAAGCTGTGGATGTTATTGATCCACTGCTCGTATCTGTGGCTTTGAAGA 3523 Query 3440 ACTCTCTGCTTCGTCTGCTTCAGATTGCTATGGTCTGCCTTGCTGAAACGCCAGCTAATC 3499 |||||| |||||||||||||||||| |||||| | || |||||||||||||||||||| | Sbjct 3524 ACTCTCAGCTTCGTCTGCTTCAGATAGCTATGCTTTGTCTTGCTGAAACGCCAGCTAAGC 3583 Query 3500 GCCCAAACATGCTTGATGTGTTGAAGGCCCTCAAGGATATATGAGC 3545 |||| ||||||||||||||||||||||| || ||||| |||||||| Sbjct 3584 GCCCTAACATGCTTGATGTGTTGAAGGCTCTTAAGGAGATATGAGC 3629 Score = 217 bits (117), Expect = 7e-55 Identities = 179/207 (86%), Gaps = 12/207 (6%) Strand=Plus/Plus Query 1 ATGACGTTTCTTCCCGCCTTGTTCCTGTGGTTTCTCTTCTTCTCTGTTTCAGA-CACCGC 59 ||| |||||||| |||| ||||||| | |||||||||||||||| |||| || |||| Sbjct 49 ATGGCGTTTCTTACCGCATTGTTCC--T-GTTTCTCTTCTTCTCTTTTTC-GAGTTCCGC 104 Query 60 CATTGTTGATCTAAGCTCAGAGACGAGTTCTCTGC-TCTCCTTCAAGCACTCACTGGAAA 118 |||||||||||| ||||| || || | |||||| | |||||||||||| |||||| |||| Sbjct 105 CATTGTTGATCTTAGCTCGGAAACAACTTCTCT-CATCTCCTTCAAGCGCTCACTAGAAA 163 Query 119 ACCCATCTCGCCTTTCTTCATGGAACGTTTCGTCTTCCTCGTCGTCTCACTGCGATTGGG 178 ||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 164 ACCCATCTCTCCTTTCTTCATGGAACGTTTCGTCTTCC--G-CGTCTCACTGCGATTGGG 220 Query 179 TCGGCGTTACGTGTTTG-TTCGGACGA 204 | |||||||||||| || || |||||| Sbjct 221 TTGGCGTTACGTGTCTGCTT-GGACGA 246 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 176487305474 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5