BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487557
Length=1948
Score E
Sequences producing significant alignments: (Bits) Value
AT5G07320.1 | Symbols: | Mitochondrial substrate carrier famil... 2946 0.0
AT5G61810.1 | Symbols: | Mitochondrial substrate carrier famil... 1306 0.0
AT5G51050.1 | Symbols: | Mitochondrial substrate carrier famil... 645 0.0
> AT5G07320.1 | Symbols: | Mitochondrial substrate carrier family
protein | chr5:2309911-2312287 FORWARD LENGTH=1982
Length=1982
Score = 2946 bits (1595), Expect = 0.0
Identities = 1865/1988 (94%), Gaps = 48/1988 (2%)
Strand=Plus/Plus
Query 1 ATGTTACCGTCACTTGCGGTTGACAGATGACGGAGCCGGATTTTGCTTCACCGGCCATCA 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||
Sbjct 1 ATGTTACCGTCACTTGCGGTTGACAGATGACGGAGCCGGATTTTCCTTCACCGG-C--CA 57
Query 61 TCCATCGTTTATAGCCACTG------------A-CATTAACCCTTTTCGTTTCTGACTCC 107
|||||||||||||||||||| | ||||||||||||| | ||||||||||
Sbjct 58 TCCATCGTTTATAGCCACTGACCCACAACAACACCATTAACCCTTTTTGCTTCTGACTCC 117
Query 108 AA-AGTGAAGTAAATTTCCAAACTATTGTGTTTCGTCTTCGACGTGAAGACTCTTTCGGT 166
|| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 118 AATAGTGAAGTAAATTTCCAAACTTTTGTGTTTCTTCTTCGACGTGAAGACTCTTTCGGT 177
Query 167 -G-CTCTTGTCTTGTGA---G-CAGGTCTTCTTTCTCAAAACCCAGGACTCACTCTCTG- 219
| | |||| |||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 178 GGTGTGTTGTGTTGTGACTTGTGAGGTCTTCTTTCTCAAAACCCAGGACTCACTCTCTGT 237
Query 220 ----T--AT----AAGAAGATGAATGATCCTTAGAATCATTCAAATCTATTGTAAAGCAT 269
| || ||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 238 ATAATAAATACGCAAGAAGATGAATGATCCTTAGAATCATTCAATTCTCTTGTAAAGCAT 297
Query 270 TCTAA-TTGGGGCAATCTCG--ATTGATCGCGAATCAGCAATGGAATCGTCGAAGCCCAA 326
||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct 298 TCTAATTTGGGGCAATCTCGATATTGATCGCGAATCAGCAATGGAGTCATCGAAGCCCAA 357
Query 327 AAACCGTAATCCGATGAAGAAACCTGTATCCGTCACGATGGAGCATGTTCTATTGGCGTT 386
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 358 AAACCGTAACCCGATGAAGAAACCTGTATCCATCACGATGGAGCATGTTCTATTGGCGTT 417
Query 387 ACGTGAGACTATGGATGAGAGAGAGATCAGGATTCGTAGTTTGTTTGATTTCTTCGATAA 446
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 418 ACGTGAGACAATGGATGAGAGAGAGATCAGGATTCGTAGTTTGTTTGATTTCTTTGATAA 477
Query 447 TTCGAATTTAGGGTTCTTAGATTATGCCCAGATCGAAAAGGGTCTTGCTTCGCTTCAGAT 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 TTCGAATTTAGGGTTCTTAGATTATGCCCAGATCGAAAAGGGTCTTGCTTCGCTTCAGAT 537
Query 507 TCCTCCTGAGTACAAGTACGCTAGAGATTTGTTTAGAGTCTGCGACGCCAATCGAGATGG 566
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 538 TCCTCCTGAGTACAAGTACGCTAGAGATTTGTTTAGAGTCTGCGACGCTAATCGAGATGG 597
Query 567 GCGTGTGGATTACCAGGAGTTTCGTCGATACATTGATGCTAAGGAGCTTGAGCTGTATAG 626
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 598 GCGTGTTGATTACCAGGAGTTTCGTCGATACATTGATGCTAAGGAGCTTGAGCTATACAG 657
Query 627 GATTTTCCAAGCCATTGATGTTGAGCACAATGGCTGCATTTTGCCTGAGGAGCTTTGGGA 686
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 658 GATTTTCCAAGCCATTGATGTTGAGCATAATGGCTGCATTTTGCCTGAGGAGCTTTGGGA 717
Query 687 GGCTCTTGTTAAGGCCGGCATTGAGATCGATGATGAGGAACTCGCTCGTTTTGTGGAGCA 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 GGCTCTTGTTAAGGCCGGCATTGAGATCGATGATGAGGAACTCGCTCGTTTTGTGGAGCA 777
Query 747 TGTTGATAAGGACAATAATGGAACTATAACGTTTGAAGAATGGAGAGATTTTCTTTTGTT 806
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 778 TGTTGATAAGGACAACAATGGAACTATAACGTTTGAAGAGTGGAGAGATTTTCTTTTGTT 837
Query 807 ATACCCTCATGAAGCCACTATTGAAAACATTTATCATCACTGGGAAAGGGTGTGCTTGAT 866
||| |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||
Sbjct 838 ATATCCTCATGAAGCCACCCTTGAAAACATATATCATCATTGGGAAAGGGTGTGCTTGAT 897
Query 867 AGATATTGGGGAGCAAGCTGTTATACCGGATGGTATAAGCAAACATGTGAAAAGAAGCAG 926
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 898 AGATATTGGGGAGCAAGCTGTTATACCGGATGGTATAAGTAAACATGTGAAAAGAAGCAG 957
Query 927 ATTACTTCTCGCTGGTGGACTAGCCGGAGCTGTTTCTAGAACTGCTACCGCGCCTCTGGA 986
||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||
Sbjct 958 ATTACTTCTCGCTGGAGGACTAGCCGGAGCTGTTTCTAGAACTGCAACTGCGCCTCTTGA 1017
Query 987 TCGCCTGAAAGTTGTTTTGCAAGTTCAAAGGGCACACGCAGGGGTCCTCCCGACCATTAA 1046
||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1018 TCGTCTGAAGGTTGTTTTGCAAGTTCAAAGGGCACATGCAGGGGTCCTCCCGACAATTAA 1077
Query 1047 GAAGATATGGAGAGAAGATAAGTTGATGGGtttttttAGAGGTAATGGGTTAAATGTCAT 1106
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1078 GAAGATATGGAGAGAAGATAAGTTGATGGGTTTCTTTAGAGGTAATGGGTTAAATGTCAT 1137
Query 1107 GAAGGTTGCTCCTGAAAGCGCCATTAAATTTTGTGCTTACGAAATGCTAAAACCCATGAT 1166
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1138 GAAGGTTGCTCCTGAAAGTGCCATTAAGTTTTGTGCTTACGAAATGCTAAAACCCATGAT 1197
Query 1167 TgggggggAGGATGGTGATATTGGTACAAGCGGGAGGCTTTTGGCTGGTGGAATGGCTGG 1226
||| |||||||||||||||||||||||||| ||||| ||| |||| ||||||||||||||
Sbjct 1198 TGGAGGGGAGGATGGTGATATTGGTACAAGTGGGAGACTTATGGCAGGTGGAATGGCTGG 1257
Query 1227 TGCATTAGCTCAAACCGCTATTTACCCTATGGATCTAGTGAAGACTCGGTTACAGACTTG 1286
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1258 TGCATTGGCTCAAACCGCTATTTACCCTATGGATCTCGTGAAGACTCGGTTACAGACTTG 1317
Query 1287 TGTCAGTGAAGGTGGAAAGGCACCTAAGTTGTGGAAGCTCACAAAAGATATATGGGTACA 1346
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1318 TGTCAGTGAAGGTGGAAAGGCACCTAAGTTGTGGAAGCTTACAAAAGATATATGGGTTCG 1377
Query 1347 AGAGGGACCTCGGGCGTTCTACAAGGGTCTGTTTCCTTCTCTTCTTGGGATTATTCCTTA 1406
|||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1378 GGAGGGACCTCGGGCTTTCTACAAGGGTCTGTTTCCTTCTCTTCTTGGGATTGTTCCTTA 1437
Query 1407 TGCAGGAATTGACCTCGCTGCATACGAAACGCTAAAAGACTTGTCGAGAACATATATTCT 1466
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1438 TGCAGGAATTGACCTCGCTGCATATGAAACGCTAAAAGACTTGTCCAGAACATATATTCT 1497
Query 1467 TCAGGACACTGAGCCGGGTCCTCTGATACAGCTGAGCTGTGGAATGACATCAGGAGCTCT 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1498 TCAGGACACTGAGCCGGGTCCTCTGATACAGCTGAGCTGTGGAATGACATCAGGAGCCCT 1557
Query 1527 TGGAGCATCATGTGTTTACCCGTTACAGGTAGTAAGAACAAGAATGCAAGCGGATAGTTC 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1558 TGGAGCATCATGTGTTTACCCGTTACAGGTAGTAAGAACAAGAATGCAAGCGGATAGTTC 1617
Query 1587 AGAT-ACGACAATGAAGCAAGAGTTTATGAAAACGATGAAAGGCGAAGGTCTGAGAGGTT 1645
|| |||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct 1618 -GAAGACGACAATGAAGCAAGAGTTTATGAATACGATGAAAGGAGAAGGTCTTAGAGGTT 1676
Query 1646 TCTACAGAGGACTCTTACCCAATCTTCTCAAAGTAGTTCCAGCCGCAAGCATCACGTACA 1705
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1677 TCTACAGAGGACTATTACCCAATCTTCTCAAAGTAGTTCCAGCGGCAAGCATCACGTACA 1736
Query 1706 TTGTTTATGAAGCTATGAAGAAAAATATGGCTCTTGATTAGCCAATACGGTCTTGAAATT 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1737 TTGTTTATGAAGCTATGAAGAAAAATATGGCTCTTGATTAGCCAATACGGTCTTGAAATT 1796
Query 1766 TTCTCCGGGTTAGTTTATTCTTTTTTGTTCCCAAGGGGTCACTCTAGG-AGGTTATGTGA 1824
||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1797 TTCTCCGAGTTAGTTTATTCTTTTTTGTTCCCAAGGGGTCACTCTCTCTAGGTTATGTGA 1856
Query 1825 GAAAAACAAAAACAAGAC-GAGATTGGAACATGTCTTCGG-G-TCGT-TTGATGTGTTCA 1880
|||| |||||||||||| ||||||| |||||||||||| | | || || | | | ||
Sbjct 1857 GAAATTCAAAAACAAGACAGAGATTGTAACATGTCTTCGTTGAT-GTGTTCAAGA-T-CA 1913
Query 1881 AGACTCAAGTCTGTAAAACTCACATCTCCAAAAAAGATTTTGAATGGTTAAGTTATGAAC 1940
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1914 AGACTCAAGTCTGTAAA-CTCACATCTCCAAAAAAGATTTTGAATGGTTAAGTCATGAAC 1972
Query 1941 TCACATCT 1948
||||||||
Sbjct 1973 TCACATCT 1980
> AT5G61810.1 | Symbols: | Mitochondrial substrate carrier family
protein | chr5:24831619-24833902 REVERSE LENGTH=1828
Length=1828
Score = 1306 bits (707), Expect = 0.0
Identities = 1180/1405 (84%), Gaps = 46/1405 (3%)
Strand=Plus/Plus
Query 364 ATGGAGCATGT-TCTATTGGCGTTACGTGAGACTATGGATG-AGAGAGAGATCAGGATTC 421
|||||||| || | | |||| ||||| ||||| | ||| | ||||||||||||||||||
Sbjct 222 ATGGAGCACGTGT-TGGTGGCATTACGAGAGACCAAGGA-GAAGAGAGAGATCAGGATTC 279
Query 422 GTAGTTTGTTTGATTTCTTCGATAATTCGAATTTAGGGTTCTTAGATTATGCCCAGATCG 481
| |||| || |||||||| |||||||| |||||||||||||| || |||||||||
Sbjct 280 AAAAACTGTTCGAATTCTTCGACAATTCGAAGTTAGGGTTCTTAGACGATACCCAGATCG 339
Query 482 A-AAAGGGTCTTG-CTTCGCTTCAG-ATTCCTCCTGAGTACAAGTACGCTAGAGATTTGT 538
| ||| ||| ||| |||||||| || |||||||| |||| | ||||||||| ||||| |
Sbjct 340 AGAAA-GGT-TTGTCTTCGCTT-AGTATTCCTCCAAAGTATAGGTACGCTAGTGATTT-T 395
Query 539 -TTAGAGTCTGCGACGCCAATCGAGATGGGCGTGTGGATTACCAGGAGTTTCGTCGATAC 597
||| |||||||||| | |||||||||||||||||||| ||||||||||||||||| |||
Sbjct 396 CTTAAAGTCTGCGACTCGAATCGAGATGGGCGTGTGGACTACCAGGAGTTTCGTCGTTAC 455
Query 598 ATTGATGCTAAGGAGCTTGAGCTGTATAGGATTTTCCAAGCCATTGATGTTGAGCACAAT 657
|| |||||||| ||||||||| |||| | |||||| || ||||||||| |||| ||||||
Sbjct 456 ATGGATGCTAAAGAGCTTGAGTTGTACAAGATTTTTCAGGCCATTGATATTGAACACAAT 515
Query 658 GGCTG-CATTTTG-CCTGAGGAGCTTTGGGAGGCTCTTGTTAAGGCCGGCATTGAGATCG 715
||| | || |||| || | |||||||||||||||||||| ||| || |||||| | |||
Sbjct 516 GGC-GACA-TTTGTCCAGCGGAGCTTTGGGAGGCTCTTGATAAAGCTGGCATTAAAATCA 573
Query 716 ATGATGAGGAACTCGC-TCGTTTTGTGGAGCATGTTGATAAGGACAATAATGGAACTATA 774
| ||||||||||| || || |||| |||||||||||||||||||||| || |||| ||||
Sbjct 574 AAGATGAGGAACTTGCTTC-TTTTATGGAGCATGTTGATAAGGACAACAACGGAATTATA 632
Query 775 ACGTTTGAAGAATGGAGAGATTTTCTTTTGTTATACCCTCATGAAGCCACTATTGAAAAC 834
|| ||||| || ||||| |||||||||||| || ||||||||||||| || ||||| |||
Sbjct 633 ACTTTTGAGGAGTGGAGGGATTTTCTTTTGCTAAACCCTCATGAAGCTACAATTGAGAAC 692
Query 835 ATTTATCATCACTGGGAAAGGGTGTGCTTGATAGATATTGGGGAGCAAGCTGTTATACCG 894
|||||||||||||||||||| || ||||| ||||| ||||| |||||||||||||||||
Sbjct 693 ATTTATCATCACTGGGAAAGAGTATGCTTAATAGACATTGGAGAGCAAGCTGTTATACCA 752
Query 895 GATGGTATAAGCAAACATG-TGAAAAGAAGCAGATTACTTCTCGCTGGTGGACTAGCCGG 953
||||||||||| ||| | | ||||||||| |||||||||||| || ||| |||| ||
Sbjct 753 GATGGTATAAGTGCACACGCT-CAAAGAAGCAAATTACTTCTCGCGGGAGGAATAGCAGG 811
Query 954 AGCTGTTTCTAGAACTGCTACCGCGCCTCTGGATCGCCTGAAAGTTGTTTTGCAAGTTCA 1013
|||||||||||||| || || ||||||||||| || |||||||||| | ||||||||||
Sbjct 812 GGCTGTTTCTAGAACCGCAACTGCGCCTCTGGACCGTCTGAAAGTTGCTCTGCAAGTTCA 871
Query 1014 AAGGGCACACGCAGGG-GTCCTCCCGACCATTAAGAAGATATGGAGAGAAGATAAGTTGA 1072
| || || | ||| || |||||||||||||||| |||||||||||||||||||||
Sbjct 872 ACGGACA-AATTTGGGTGTTGTCCCGACCATTAAGAAAATATGGAGAGAAGATAAGTTGT 930
Query 1073 TGGGtttttttAGAGGTAATGGGTTAAATGTCA-TGAAGGTTGCTCCTGAAAGCGCCATT 1131
||||||| || |||||||||||||||||||| | ||| || |||||||||||||| | |
Sbjct 931 TGGGTTTCTTCAGAGGTAATGGGTTAAATGT-AGCGAAAGTCGCTCCTGAAAGCGCTA-T 988
Query 1132 AAATTTTG-TGCTTACGAAATGCTAAAACCCATGATTgggggggAGGATGGTGATATTGG 1190
||| |||| |||||| |||||||| ||||| || |||||||| | ||||||||| |||||
Sbjct 989 AAAGTTTGCTGCTTATGAAATGCTGAAACCAATAATTGGGGGAGCGGATGGTGACATTGG 1048
Query 1191 TACAAGCGGGAGGCTTTTGGCTGGTGGAATGGCTGGTGCATTAGCTCAAACCGCTATTTA 1250
|||||||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||
Sbjct 1049 TACAAGCGGGAGGCTTTTGGCTGGTGGATTGGCTGGTGCAGTGGCTCAAACAGCTATTTA 1108
Query 1251 CCCTATGGATCTAGTGAAGACTCGGTTACAGACTTGTGTCAGTGAAGGTGGAAAGGCACC 1310
||||||||||| |||||||||||||||||||||| ||| ||||||| ||| | ||||
Sbjct 1109 TCCTATGGATCTCGTGAAGACTCGGTTACAGACTTTTGTGAGTGAAGTTGGGA---CACC 1165
Query 1311 TAAGTTGTGGAAGCTCACAAAAGATATATGGGTACAAGAGGGACCTCGGGCGTTCTACAA 1370
||| ||||||| |||||||| ||||| ||| | ||||| ||||| || || || ||||
Sbjct 1166 AAAGCTGTGGAAACTCACAAAGGATATTTGGATTCAAGAAGGACCCCGAGCTTTTTACAG 1225
Query 1371 GGGTCTGTT-TCCTTCTCTTCTTGGGATTATTCCTTATGCAGGAATTGACCTCGCTGCAT 1429
|||||| || ||||||||| |||||||||| ||||| |||||||||||||| ||||| |
Sbjct 1226 GGGTCT-TTGTCCTTCTCTAATTGGGATTATCCCTTACGCAGGAATTGACCTTGCTGCTT 1284
Query 1430 ACGAAACGCTAAAAGACTTGTCGAGAACATATATTCTTCAGGACACTG---AGCCGGGTC 1486
||||||| || |||||||| || || || || ||||||| ||||||| |||| ||||
Sbjct 1285 ACGAAACTCTTAAAGACTTATCAAGGGCACATTTTCTTCATGACACTGCGGAGCCAGGTC 1344
Query 1487 CTCTGATACAGCTGAGCTGTGGAATGACATCAGGAGCTCTTGGAGCATCATGTGTTTACC 1546
|| ||||||| ||| | ||||||||||| || ||||||||||||||||| ||||||||||
Sbjct 1345 CTTTGATACAACTGGGATGTGGAATGACTTCTGGAGCTCTTGGAGCATCGTGTGTTTACC 1404
Query 1547 CGTTACAGGT-AGTAAGAACAAGAATGCAAGCGGATAGTTCAGATACGA-CAATGAAGC- 1603
| |||||||| | ||||||||||||||||||| ||||| ||| | || | || || ||
Sbjct 1405 CATTACAGGTCA-TAAGAACAAGAATGCAAGCTGATAGCTCAAAAACAAGCA-TGG-GCC 1461
Query 1604 AAGAGTTTATGAAAACGATGAA-AGGCGAAGGTCTGAGAGGTTTCTACAGAGGACTCTTA 1662
|||||||| |||||||| | || |||||||||||| | |||||| ||||||||| ||||
Sbjct 1462 AAGAGTTTCTGAAAACGCT-AAGAGGCGAAGGTCTAAAAGGTTTTTACAGAGGAATCTTC 1520
Query 1663 CCCAATCTTCT-CAAAGT-AGTTCCAGCCGCAAGCATCACGTACATTGTTTATGAAGCTA 1720
||||| ||||| |||||| | |||| |||||||||| ||||| |||| || |||||||
Sbjct 1521 CCCAA-CTTCTTCAAAGTCA-TTCCTTCCGCAAGCATTTCGTACCTTGTCTACGAAGCTA 1578
Query 1721 TGAAGAAAAATATGGCTCTTGATTA 1745
||||||||||| | || ||||||||
Sbjct 1579 TGAAGAAAAATCTTGCCCTTGATTA 1603
> AT5G51050.1 | Symbols: | Mitochondrial substrate carrier family
protein | chr5:20753381-20755714 FORWARD LENGTH=1464
Length=1464
Score = 645 bits (349), Expect = 0.0
Identities = 1094/1442 (76%), Gaps = 98/1442 (7%)
Strand=Plus/Plus
Query 343 AAGAAACCTGTATCCGTCACGATGGAGCATGTTCTATTGGCGT-TACGTGAGACTATGGA 401
|||||||| | | |||| | || || |||||||| || || | | |||||||| | ||
Sbjct 46 AAGAAACCCGGACCCGTTTCAATTGATCATGTTCTCTTAGC-TCTCCGTGAGAC-A-AGA 102
Query 402 TG-AGAGAGAGA-TCAGGATTC-GTAGTTTGTTTGA-TTTCTTCGATAATTCGAAT-TTA 456
| |||| |||| | | || || | || || || | |||||| ||| | |||| ||
Sbjct 103 -GAAGAGCGAGATTTACGAATCAGGAGCTT-ATTCAGTTTCTTTGATTCTGAGAATGTT- 159
Query 457 GGGTT-CTTAGATTATGCCCAGATCGA-AAAGGGTCT-TGCTTCGCTTCAGATTCCTCCT 513
|||| |||||||| ||| || || || || |||| | || | ||||||| || || |
Sbjct 160 -GGTTACTTAGATTGTGCTCAAATTGAGAAGGGGT-TATG-TGCGCTTCAAATCCCAAGT 216
Query 514 GAGTACAAGTACGCT-AGAGATTTGTTTAGAGTCTGCGACGCCAATCGAGATGGGCGTGT 572
| ||| || |||||| || || |||||||| || || || || ||| |||||||||||||
Sbjct 217 GGGTATAAATACGCTAAG-GAGTTGTTTAGGGTTTGTGATGCGAATAGAGATGGGCGTGT 275
Query 573 GGATTACCAGGAGTTTCGTCGATACATTGATGCTAAGGAGCTTGAGCTGTATAGGAT-TT 631
|||||| || ||||||||| |||| || |||| ||||||||||||||||||||| || ||
Sbjct 276 GGATTATCATGAGTTTCGTAGATATATGGATGATAAGGAGCTTGAGCTGTATAGAATCTT 335
Query 632 TCCAAGCCATTGATGTTGAGCACAATGGCTGCATTT-TGCCTGA-GGAGCTTTGGGAGGC 689
| ||||| |||||||||||||| ||||| || |||| | ||||| ||| |||||||| |
Sbjct 336 T-CAAGCTATTGATGTTGAGCATAATGGTTGTATTTCT-CCTGAGGGA-CTTTGGGATTC 392
Query 690 TCTTGTTAAGGCCGGCATTGAGATCGATGATGAGGAACTCGCTCGTTTTGTGGAGCATGT 749
|| ||||| || || |||||||| | |||||||| || |||||||||||||| |||||
Sbjct 393 ACTCGTTAAAGCTGGGATTGAGATAAAAGATGAGGAGCTTGCTCGTTTTGTGGAACATGT 452
Query 750 TGATAAGGACAATAATGGAACT-ATAACGTTTGAAGAATGGAGAGATTTTCTTTTGTTAT 808
||| ||||||||| |||||| | || | |||||||||||||||||||||||||||| | |
Sbjct 453 TGACAAGGACAATGATGGAA-TCATTATGTTTGAAGAATGGAGAGATTTTCTTTTGCTGT 511
Query 809 ACCCTCATGAAGCCACTATTGAAAACATTTATCATCACTGGGAAAGGGTGTG-CTTGATA 867
||||||| ||||| || |||||||| || || |||||||||||||| || || |||| ||
Sbjct 512 ACCCTCACGAAGCTACCATTGAAAATATATACCATCACTGGGAAAGAGTATGTCTTG-TA 570
Query 868 GATATTGGGGAGCAAGCTGTTATACCGGATGGTATAAGCAAACATGTGAAA-AGAAGCAG 926
|||||||| || |||||||| || || || || || ||||||||| | ||| || || |
Sbjct 571 GATATTGGAGAACAAGCTGTAATTCCAGAAGGCATCAGCAAACATAT-AAAGAGGAGTA- 628
Query 927 ATTACTTC-TCGCTGGTGG-ACTAGCCGGAGCTGTTTCTAGAACTGCTACCGCGCCTCTG 984
| || ||| |||| ||||| | |||| || || | |||||| |||||||| || |||||
Sbjct 629 ACTATTTCATCGCAGGTGGCA-TAGCTGGTGCAGCTTCTAGGACTGCTACTGCACCTCTA 687
Query 985 GATCGCCTGAAAGTTGTTTTGCAAGTTCA-AAGGGCACACGC-AGGGGTCCTCCC-GACC 1041
|||||| | |||||| |||||||| |||| || | | || || ||| | ||
Sbjct 688 GATCGCTTAAAAGTTCTTTTGCAAATTCAGAAAACCG-ATGCTAGAA-TCCGAGAAG-CC 744
Query 1042 ATTAAGAAGATATGGAGAGAAGA-TA-AGTT-GATGGGtttttttAGAGGTAATGGGTTA 1098
|| ||| |||||||| || || | |||| || || ||||||| ||||||| |||||
Sbjct 745 ATAAAGTTGATATGGA-AGCAGGGTGGAGTTAGA-GG-TTTTTTTCGAGGTAACGGGTTG 801
Query 1099 AATGTCATGAAGGTTGCTCCTGAAAGCGCCATTAAATTTTGTGCTTACGAAATGCT-AAA 1157
||| | ||||||| || || || || ||||| || || | ||| || || | | |||
Sbjct 802 AATATTGTGAAGGTAGCACCAGAGAGTGCCATCAAGTTCTATGCATATGAGCTTTTCAAA 861
Query 1158 ACC-C-AT-GAT-------Tgggggg-gAGGATG-GTGATATTGGTACAAGCGGG-AGGC 1204
| | | || | | |||| | || | | | ||||| || |||| | | || |
Sbjct 862 AACGCTATCGGTGAAAACATGGGTGAAGACAAAGCG-GATATAGGCACAA-CAGTTAGAC 919
Query 1205 TTTTGGCTGGTGGAATGGCTGGTGCATTAGCTCAAACCGCTATTTACCCTATGGATCTAG 1264
|||| ||||| ||||||||||||||| |||||||| || |||| |||||| | ||||| |
Sbjct 920 TTTTTGCTGGAGGAATGGCTGGTGCAGTAGCTCAAGCCTCTATATACCCTTTAGATCTTG 979
Query 1265 TGAAGACTCGGTTACAGACTT----GTGTCAGTGAAGGTGGAAAGGCACCTAAGTTGTGG 1320
|||| |||||||| ||||||| | | || | ||||| | || | | | |||
Sbjct 980 TGAAAACTCGGTTGCAGACTTACACGAGCCAA-GCAGGTGTTGCTGTTCCCAGGCT-TGG 1037
Query 1321 AA-GCTCACAAAAGATATATGGGTACAAGAGGGACCTCGGGCGTTCTACAAGGGTCTGTT 1379
|| |||||| |||||||||| ||| || ||||| || || || |||||||| ||||| ||
Sbjct 1038 AACGCTCACCAAAGATATATTGGTTCATGAGGGTCCACGTGCCTTCTACAAAGGTCT-TT 1096
Query 1380 TCC-TTCTCTTCTTGGGATTATTCCTTATGCAGGAATTGACCTCGCTGCATACGAAACGC 1438
||| |||||||||||||||||||||||| || || |||||||| |||||||| || ||
Sbjct 1097 TCCCTTCTCTTCTTGGGATTATTCCTTACGCGGGTATTGACCTTGCTGCATATGAGACAT 1156
Query 1439 TAAAAGACTTGTCGAGAACATATATTCTTCAGGACACTGAGCCGGGTCCTCT-GATACAG 1497
|||| |||||||| || |||||||||||||| ||| |||| || ||||| || | | ||
Sbjct 1157 TAAAGGACTTGTCCAGGACATATATTCTTCAAGACGCTGAACCAGGTCCGCTCG-TGCAA 1215
Query 1498 CTGAGC-TGTGGAATGA-CATCAGGAGCTCTTGGAGCATCATGTGTTTACCCGTTACAGG 1555
|| || ||||||| | | |||||||||||||||||| | ||||| || || || ||||
Sbjct 1216 CT-AGGATGTGGAACAATC-TCAGGAGCTCTTGGAGCAACCTGTGTCTATCCTTTGCAGG 1273
Query 1556 TAGTAAGAACAAGAATGCAAGCGGATA-GTTCA-GATACGACAATGAAGCAAGAGT-TT- 1611
| || |||||||||||||||||||| | | || || || | ||| || |||| ||
Sbjct 1274 TTGTGAGAACAAGAATGCAAGCGGA-ACGAGCAAGA-ACCTCGATGT--CAGGAGTATTC 1329
Query 1612 ATGAAAACGATGAAAG-GC-GAAGGTCTG-AGAGGTTTCTACAGAGGACT-CTTACCCAA 1667
| || ||| || || | | |||||| | |||| |||||| ||| || || ||| ||
Sbjct 1330 AGGAGAACAAT-AA-GTGAAGAAGGT-TACAGAGCACTCTACAAAGGGCTACT-ACCGAA 1385
Query 1668 TCTTCTCAAAG-TAGTTCCAGCCGCAAGCATCACGTACATTGTTTATGAAGCTATGAAGA 1726
||||| |||| ||||||| || |||||||| || || || ||||| ||||| ||||| |
Sbjct 1386 CCTTCT-AAAGGTAGTTCCTGCTGCAAGCATTACATATATGGTTTACGAAGCAATGAA-A 1443
Query 1727 AA 1728
||
Sbjct 1444 AA 1445
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 96485447490
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5