BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487602
Length=1368
Score E
Sequences producing significant alignments: (Bits) Value
AT5G07680.1 | Symbols: ANAC080, ANAC079, ATNAC4, NAC080 | NAC d... 2108 0.0
AT5G61430.1 | Symbols: ANAC100, ATNAC5, NAC100 | NAC domain con... 859 0.0
> AT5G07680.1 | Symbols: ANAC080, ANAC079, ATNAC4, NAC080 | NAC
domain containing protein 80 | chr5:2435875-2437480 FORWARD
LENGTH=1365
Length=1365
Score = 2108 bits (1141), Expect = 0.0
Identities = 1301/1376 (95%), Gaps = 19/1376 (1%)
Strand=Plus/Plus
Query 1 AActtctctttcacctttactctctctatctctctt---tcta--tatatatattccctg 55
|||||||||||||||||||||||||||||||||||| | || |||||||||||||||
Sbjct 1 AACTTCTCTTTCACCTTTACTCTCTCTATCTCTCTTACATATATCTATATATATTCCCTG 60
Query 56 aacttatctcttGAAAACATTCAAGATCAAATCTCTCTCGATCTATTCAAAGAAAAACTA 115
||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 61 AACCCATCTCTTGAAAACATTCAAGATCAAATCTTTCTCGATCTATTCAAAGAAAAACTA 120
Query 116 TTTAAGAAATATATGTTTTGGATCAAATAAGGGTTTGATCTTGTTCCGGAATCAGGtttt 175
||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 121 TTTAAGAAACATATGTTTTGGATCAAGTAAGGGTTTGATCTTGTACCGGAATCAGGTTTT 180
Query 176 tgcttttcttttagggtttaaggtttttttAAAGA-AGATGGAAACTTTCGGTGTGTTTC 234
|||||||||| |||||||||||| || |||||| | ||||||||||||||||||||||||
Sbjct 181 TGCTTTTCTTCTAGGGTTTAAGG-TTATTTAAAAACAGATGGAAACTTTCGGTGTGTTTC 239
Query 235 ACAAGGAAGATGATGAGCAGATGGATTTGCCTCCTGGTTTTAGGTTTCATCCAACAGACG 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 ACAAGGAAGATGATGAGCAGATGGATTTGCCTCCTGGTTTTAGGTTTCATCCAACAGACG 299
Query 295 AAGAACTCATAACCCACTATCTTCACAAGAAGGTTCTCGACATCAGTTTCGCGGCTAAAG 354
|||||||||||||||||||||| |||||||||||||| ||| | ||||| |||||||||
Sbjct 300 AAGAACTCATAACCCACTATCTCCACAAGAAGGTTCTTGACCTTGGTTTCTCGGCTAAAG 359
Query 355 CTATTGGTGAGGTTGATTTGAACAAAGCTGAGCCATGGGAGTTGCCATATAAAGCAAAAA 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 CTATTGGTGAGGTTGATTTGAACAAAGCTGAGCCATGGGAGTTGCCATATAAAGCAAAAA 419
Query 415 TGGGTGAGAAAGAATGGTACTTTTTCTGTGTGAGGGATCGAAAGTATCCAACCGGTCTGA 474
| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||
Sbjct 420 TTGGTGAGAAAGAATGGTACTTTTTCTGTGTGAGGGATAGAAAGTATCCGACTGGTCTGA 479
Query 475 GGACTAACCGAGCAACTCAAGCCGGTTATTGGAAGGCGACAGGGAAGGATAAGGAAATCT 534
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 480 GGACTAACCGAGCAACTCAAGCCGGTTATTGGAAGGCGACAGGGAAGGATAAAGAGATCT 539
Query 535 TCCGAGGTAAATCGCTTGTGGGTATGAAGAAAACACTTGTTTTCTATAGAGGAAGAGCTC 594
||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 540 TCCGAGGCAAATCGCTTGTTGGTATGAAGAAAACACTTGTTTTCTACAGAGGAAGAGCTC 599
Query 595 CTAAAGGCCAGAAAACAAATTGGGTGATGCATGAGTATAGGCTAGATGGGAAACTCTCAG 654
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 600 CTAAAGGCCAGAAAACAAATTGGGTGATGCATGAGTATAGGCTAGATGGAAAACTCTCTG 659
Query 655 CTCACAACTTGCCTAAAACCGCTAAGAATGAATGGGTGATATGCAGGGTATTTCATAAAA 714
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 660 CTCACAACTTGCCTAAAACCGCTAAGAATGAATGGGTGATCTGCAGGGTATTTCATAAAA 719
Query 715 CTGCTGGTGGTAAGAAGATCCCGATTTCGACCTTAATCCGAATCGGTTCTTACGGAACCG 774
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 720 CTGCTGGAGGTAAGAAGATCCCGATTTCGACGTTAATCCGAATCGGTTCTTACGGAACCG 779
Query 775 GGTCCAGTTTACCACCTTTAACCGATTCTTCACCATACAATGACAAAACCAAGACTGAAC 834
|||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||
Sbjct 780 GGTCTAGTTTACCACCTTTAACTGATTCTTCACCATACAACGACAAAACCAAGACCGAAC 839
Query 835 CAGTTTACGTGCCCTGCTTCTCCAACCACGCTGAAACTAGAGGAACAATACTCAATTGCT 894
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 840 CAGTTTACGTGCCCTGCTTCTCCAACCAAGCTGAAACTAGAGGAACAATACTCAATTGCT 899
Query 895 TTAGCAACCCTTCCCTTAGCTCGGTCCAACCAGATTTTCTCCAGATGATTCCACTCTACC 954
| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 900 TCAGCAACCCTTCCCTTAGCTCCATCCAACCAGATTTTCTCCAGATGATTCCACTCTACC 959
Query 955 AACCTCAATCTCTCAACATTTTGGAGAATCTACAGAGTTCCAATCCGGTTCTTTCGCAAG 1014
||||||||||||||||||||| |||| | |||||||||||||||| ||||||
Sbjct 960 AACCTCAATCTCTCAACATTTCCGAGA-------G--TTCCAATCCGGTTCTTACGCAAG 1010
Query 1015 ACCAATCAGTTTTACAAGCGATGGTGGAAAACAACAGAAGGCAGAACTTCAAAACATTGA 1074
| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1011 AACAATCAGTTTTACAAGCGATGATGGAAAACAACAGAAGGCAGAACTTCAAAACATTGA 1070
Query 1075 GCATCTCGCAGGAAACCGAAGTTTCGAATACCGATAATTCATCGGTTTTTGAATTTGGGA 1134
|||||||||| ||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct 1071 GCATCTCGCAAGAAACCGGGGTTTCGAACACCGATAACTCATCGGTTTTTGAATTTGGGA 1130
Query 1135 GGAAACGATTTGATCATCAAGAAGTTCCATCTTCCTCTTCCGGTCCGGTTGATCTTGAAC 1194
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1131 GGAAGCGATTTGATCATCAAGAAGTTCCATCTCCCTCTTCCGGTCCGGTTGATCTTGAAC 1190
Query 1195 CTTTCTGGAACTACTGAAGATTCAGAACCTGAAAAGTCCATTAATTTAGGTCACAAGTAA 1254
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1191 CTTTCTGGAATTACTGAAGATTCAGAACCTGAAAAGTCTATTAATTTAGGTCACAAGTAA 1250
Query 1255 GAAA-TCTTTGCTAAGTTTTATCCTTTTAGCGTGGTGTGCTAAGCTTGTATAGATTATT- 1312
|||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251 GAAAATCTTTGCAAAGTTTTATCCTTTTAGCGTGGTGTGCTAAGCTTGTATAGATTATTG 1310
Query 1313 ATCACTACTTCCACTATTAGTGTTTCATATTATTATATTCAACTAAAGTTAATATT 1368
| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1311 A-CACTACTTCCTGTATTAGTGTTTTATATTATTATATTCAACTAAAGTTAATATT 1365
> AT5G61430.1 | Symbols: ANAC100, ATNAC5, NAC100 | NAC domain containing
protein 100 | chr5:24701122-24702761 REVERSE LENGTH=1425
Length=1425
Score = 859 bits (465), Expect = 0.0
Identities = 897/1095 (82%), Gaps = 71/1095 (6%)
Strand=Plus/Plus
Query 165 AATCAGGtttttgcttttc--tttt-agggtttaaggttt-tt-ttAAAG-AA-GATGGA 217
||||||| ||||| |||| |||| |||||||||||||| || ||| || ||||||
Sbjct 156 AATCAGG-TTTTG-GTTTCAGTTTTAAGGGTTTAAGGTTTCTTGGGGAAGAAACGATGGA 213
Query 218 AACTTTCGGTGTGTTTCACAAGGAAGATGATGAGCAGATGGATTTGCCTCCTGGTTTTAG 277
||||| ||| |||||| |||| || || |||||||||||||| |||||||| || ||
Sbjct 214 GACTTTTTGTGGGTTTCAAAAGG-AG--GAAGAGCAGATGGATTTACCTCCTGGGTTCAG 270
Query 278 GTTTCATCCAACAGACGAAGAACTCATAACCCACTATCTTCACAAGAAGGTTCTCGACAT 337
||||||||||||||| |||||||||||||| |||||||| || ||||||||||| ||||
Sbjct 271 GTTTCATCCAACAGATGAAGAACTCATAACTCACTATCTCCATAAGAAGGTTCTTGACAC 330
Query 338 CAGTTTCGCGGCTAAAGCTATTGGTGAGGTTGATTTGAACAAAGCTGAGCCATGGGAGTT 397
||| ||| | ||||||||||| ||||| |||||||| |||||| | ||||||||||||||
Sbjct 331 CAGCTTCTCAGCTAAAGCTATCGGTGAAGTTGATTTAAACAAATCAGAGCCATGGGAGTT 390
Query 398 GCCATATAAAGCAAAAATGGGTGAGAAAGAATGGTACTTTTTCTGTGTGAGGGATC-GAA 456
|||| | |||||||||||||||||||||||||| |||||||||||||| || | |||
Sbjct 391 ACCATGGATGGCAAAAATGGGTGAGAAAGAATGGTATTTTTTCTGTGTGAGAGA-CAGAA 449
Query 457 AGTATCCAACCGGTCTGAGGACTAACCGAGCAACTCAAGCCGGTTATTGGAAGGCGACAG 516
||||||| |||||| | || ||||||||||||||| |||||||||||||||||||||| |
Sbjct 450 AGTATCCCACCGGTTTAAGAACTAACCGAGCAACTGAAGCCGGTTATTGGAAGGCGACCG 509
Query 517 GGAAGGATAAGGAAATCTTCCGAGGTAAATCGCTTG-TGGGTATGAAGAAAACACTTGTT 575
|||||||||| || || | |||||| ||||| |||| |||| |||||||| |||||||||
Sbjct 510 GGAAGGATAAAGAGATATACCGAGGCAAATCACTTGTTGGG-ATGAAGAAGACACTTGTT 568
Query 576 TTCTATAGAGGAAGAGCTCCTAAAGGCCAGAAAACAAATTGGGTGATGCATGAGTATAGG 635
|||||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||
Sbjct 569 TTCTATAGAGGAAGAGCTCCTAAAGGTCAGAAAACCAACTGGGTGATGCATGAGTACAGG 628
Query 636 CTAGATGGGAAACTCTCAGCTCACAACTTGCCTAAAACCGCTAAGAATGAATGGGTGATA 695
|| || || ||| |||| || || |||||||| |||||||| ||||||||||||||||||
Sbjct 629 CTTGAAGGAAAATTCTCTGCCCATAACTTGCCGAAAACCGCAAAGAATGAATGGGTGATA 688
Query 696 TGCAGGGTATTTCATAAA-ACTGCTGGTGGTAAGAAGATCCCGATTTCGAC-CTTAATCC 753
|||||||| || || ||| | |||||| || ||||||||||||||||||| || |||||
Sbjct 689 TGCAGGGTGTTCCA-AAAGAGTGCTGGAGGGAAGAAGATCCCGATTTCGAGTCT-AATCC 746
Query 754 GAATCGGTTCT-TACGGAACCGGGT----CCA---G-TTTA-CCAC-CTTTAACCGATTC 802
|||||||||| | |||||||| | || | ||| || | |||||||||||||
Sbjct 747 GAATCGGTTCACT-CGGAACCGACTTTAACCCTTCGCTTTTGCC-CTCTTTAACCGATTC 804
Query 803 TTCACCATACAATGACAAAACCAAGACTGAACCAGTTTACGTGCCCTGCTTCTCCAACCA 862
||| || ||||| || |||||||| || ||||| || |||||||||||||||||||||||
Sbjct 805 TTCGCCTTACAACGATAAAACCAAAACAGAACCGGTCTACGTGCCCTGCTTCTCCAACCA 864
Query 863 --CGC-TGAAA-CTAGAGGAACAATACTCAATTGCTTTAGCAACCCT-TCCCTTAGCTCG 917
|| | ||| | | |||||| | |||||||||||| |||| |||| | | ||| ||||
Sbjct 865 AACGGATCAAAACCA-AGGAACCACACTCAATTGCTTCAGCAGCCCTGTTC-TTAACTCG 922
Query 918 GTCCAA-CC-AGATTTTCTC-CAGATGATTCCACTCTACCAACCTCAATCTCTCAACATT 974
||||| || | ||||| || ||| |||||||||||| ||| |||| || ||| | ||
Sbjct 923 ATCCAAGCCGACATTTT-TCACAG--GATTCCACTCTATCAAACTCAGTCCCTCCAGGTT 979
Query 975 T-TGGAGAATCTACAGAGTTCCAATCCGGTTCTTTCGCAAGACCAATCAGTTTTACAAGC 1033
| | |||||||||||| || | |||||| ||||||| || |||||| |||| ||
Sbjct 980 TCTAT-GAATCTACAGAG--CC---C-GGTTCTCACGCAAGAACACTCAGTTCTACATGC 1032
Query 1034 GATGGTGGAAAACAACAGAAGGCAGAACT-TCAAAAC-ATTGAGCATCTCGCAGGAAACC 1091
||| | || ||||||||||| || || | ||||||| || ||| |||| || ||||||
Sbjct 1033 TATGATCGAGAACAACAGAAGACA-AAGTCTCAAAACGAT-GAGTGTCTCACAAGAAACC 1090
Query 1092 GAAGTTTC----GA-AT-A-C-C-GATAAT-TCATCGGTTTTTGAATTTGGGAGGAAACG 1141
| |||||| || || | | | |||| | ||||||| |||||||||||| | || |||
Sbjct 1091 GGAGTTTCAACTGACATGAACACTGATA-TCTCATCGGATTTTGAATTTGGTAAGAGACG 1149
Query 1142 ATTTGAT-CATCAAGAAGTTCCATCTTCCTCTTCCGGTCCGGTTGATCTTGAACCTTTCT 1200
|||||| | |||||||| ||| ||||||||| | || ||||||||||||||||||||||
Sbjct 1150 GTTTGATTC-TCAAGAAGATCCGTCTTCCTCTACTGGACCGGTTGATCTTGAACCTTTCT 1208
Query 1201 GGAACTACTGAAGAT 1215
|||| ||||||||||
Sbjct 1209 GGAATTACTGAAGAT 1223
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67369131390
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5