BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487632
Length=1796
Score E
Sequences producing significant alignments: (Bits) Value
AT5G07990.1 | Symbols: TT7, CYP75B1, D501 | Cytochrome P450 sup... 2630 0.0
> AT5G07990.1 | Symbols: TT7, CYP75B1, D501 | Cytochrome P450 superfamily
protein | chr5:2560394-2563109 FORWARD LENGTH=1835
Length=1835
Score = 2630 bits (1424), Expect = 0.0
Identities = 1686/1807 (93%), Gaps = 40/1807 (2%)
Strand=Plus/Plus
Query 1 GTTTTGTATT-CTCATTTATCACTTACCATTCAAACCTACCCAACA-TAATGACAACTCT 58
||||||| || ||||||| ||||||||||||| || |||||||| | ||| |||||||
Sbjct 1 GTTTTGT-TTCCTCATTTTTCACTTACCATTC-AA---ACCCAACACT-ATGGCAACTCT 54
Query 59 CTTTCTCACAATCCTTCTAGCCACTGTCCTCTTCCTCCTCCTCCTCCGTGTATTCTCTCT 118
|||||||||||||| ||||||||||||||| | ||||| |||||||| | |||||||
Sbjct 55 ATTTCTCACAATCCTCCTAGCCACTGTCCTC-T--TCCTCATCCTCCGTATCTTCTCTCA 111
Query 119 CCGGCGCAACCGCAGCCACACCAACCGTCTTCCACCGGGCCCAAACCCATGGCCCATCAT 178
||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 112 CCGTCGCAACCGCAGCCACAACAACCGTCTTCCACCGGGGCCAAACCCATGGCCCATCAT 171
Query 179 CGGAAACCTCCCTCACATGGGCCCTAAGCCTCATCGAACCCTTGCCGCCATGG-TATCTA 237
|||||||||||||||||||||| |||||||||||||||||||| ||||||||| || |||
Sbjct 172 CGGAAACCTCCCTCACATGGGCACTAAGCCTCATCGAACCCTTTCCGCCATGGTTA-CTA 230
Query 238 CTTACGGCCCTATCCTCCACCTCCGATTAGGTTTCGTCGACGTCGTGGTCGCTGCCTCTA 297
|||||||||||||||||||||||||| |||| ||||| |||||||||||||| || ||||
Sbjct 231 CTTACGGCCCTATCCTCCACCTCCGACTAGGGTTCGTAGACGTCGTGGTCGCCGCTTCTA 290
Query 298 AATCTGTGGCCGAGCAGTTCCTGAAAATCCACGACGCCAATTTCGCTAGCCGACCACCAA 357
|||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 291 AATCCGTGGCCGAGCAGTTCTTGAAAATACACGACGCCAATTTCGCTAGCCGACCACCAA 350
Query 358 ACTCAGGAGCCAAACACATGGCATATAACTATCAAGATCTTGTCTTTGCACCTTACGGAC 417
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 351 ACTCAGGAGCTAAACACATGGCATATAACTATCAAGATCTTGTCTTTGCACCTTACGGAC 410
Query 418 AACGATGGAGACTGTTGAGGAAGATTAGTTCTGTTCATCTATTTTCAGCTAAAGCTCTAG 477
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 411 ACCGATGGAGACTGTTGAGAAAGATTAGTTCTGTTCATCTATTTTCAGCTAAAGCTCTCG 470
Query 478 AAGATTTCAAACATGTTCGACAGGAAGAGGTTGGAACGCTCACGTGGGAACTAGCGCGTG 537
|||||||||||||||||||||||||||||||||||||||| ||| |||| |||| |||||
Sbjct 471 AAGATTTCAAACATGTTCGACAGGAAGAGGTTGGAACGCTAACGCGGGAGCTAGTGCGTG 530
Query 538 TAGGCACGAAACCAGTGAATTTAGGTCAGTTGGTTAACATGTGTGTAGTCAACGCGCTAG 597
| ||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||
Sbjct 531 TTGGCACGAAACCCGTGAATTTAGGCCAGTTGGTGAACATGTGTGTAGTCAACGCTCTAG 590
Query 598 GACGAGAGATGATCGGGCGGCGACTGTTCGGCGCCGACGCCGATCATAAAGCTGACGAGT 657
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 591 GACGAGAGATGATCGGACGGCGATTGTTCGGCGCCGACGCCGATCATAAAGCTGACGAGT 650
Query 658 TTCGATCGATGGTGACGGAAATGATGGCTCTCGCCGGAGTATTTAACATCGGAGATTTCG 717
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 651 TTCGATCAATGGTGACGGAAATGATGGCTCTCGCCGGAGTATTCAACATCGGAGACTTCG 710
Query 718 TGCCGTCGCTGGATTGGTTAGATTTTCAAGGAGTCGCTGGTAAAATGAAACGGCTTCACA 777
||||||| || |||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 711 TGCCGTCACTTGATTGGTTAGATTTACAAGGCGTCGCTGGTAAAATGAAACGGCTTCACA 770
Query 778 AAAGATTCGACGCTTTTCTATCGTCGATTTTGGAAGAGCACGAAATGAACGGTCAAGATC 837
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 771 AGAGATTCGACGCTTTTCTATCGTCGATTTTGAAAGAGCACGAAATGAACGGTCAAGATC 830
Query 838 AAAAGCATACAGATATGCTTAGCACTTTAATCTCGCTTAAAGGAACTGATCTTGACGGTG 897
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 831 AAAAGCATACAGATATGCTTAGCACTTTAATCTCCCTTAAAGGAACTGATCTTGACGGTG 890
Query 898 ACGGAGGAAGTTTAACGGATACTGAGATTAAAGCCTTGCTATTGAATATGTTCACAGCTG 957
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 891 ACGGAGGAAGCTTAACGGATACTGAGATTAAAGCCTTGCTATTGAACATGTTCACAGCTG 950
Query 958 GAACTGACACGTCAGCAAGTACGGTGGACTGGGCTATAGCTGAGCTAATCCGTCACCCTG 1017
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 951 GAACTGACACGTCAGCAAGTACGGTGGACTGGGCTATAGCTGAACTTATCCGTCACCCGG 1010
Query 1018 ATATAATGGTTAAAGCCCAAGAAGAACTTGAT-TCTGTTGTGGGCCGTAACAGGCCTGTT 1076
|||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||
Sbjct 1011 ATATAATGGTTAAAGCCCAAGAAGAACTTGATAT-TGTTGTGGGCCGTGACAGGCCTGTT 1069
Query 1077 AACGAATCAGACATCTCTCAGCTTCCTTACCTTCAGGCGGTTATCAAAGAGAATTTCAGG 1136
|| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1070 AATGAATCAGACATCGCTCAGCTTCCTTACCTTCAGGCGGTTATCAAAGAGAATTTCAGG 1129
Query 1137 CTTCATCCACCAACACCACTCTCGTTACCACACATCGCATCAGAGAGCTGTGAGATCAAC 1196
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1130 CTTCATCCACCAACACCACTCTCGTTACCACACATCGCGTCAGAGAGCTGTGAGATCAAC 1189
Query 1197 CGCTACCATATCCCTAAAGGATCGACGCTATTGACGAACATATGGGCCATAGCCCGTGAC 1256
||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1190 GGCTACCATATCCCGAAAGGATCGACTCTATTGACGAACATATGGGCCATAGCCCGTGAC 1249
Query 1257 CCGGATCAATGGTCCGACCCGTTAACGTTCAAACCCGAGAGATTTTTACCCGGTGGTGAA 1316
|||||||||||||||||||||||| | || |||||||||||||| |||||||||||||||
Sbjct 1250 CCGGATCAATGGTCCGACCCGTTAGCATTTAAACCCGAGAGATTCTTACCCGGTGGTGAA 1309
Query 1317 AAATCCGGCGTTGATGTGAAAGGAAGCGATTTCGAGCTTATACCGTTCGGAGCTGGGAGG 1376
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1310 AAATCCGGCGTTGATGTGAAAGGAAGCGATTTCGAGCTAATACCGTTCGGAGCTGGGAGG 1369
Query 1377 AGAATCTGTGCCGGTTTAAGTTTAGGGTTACGTACGATTCAGTTTCTGACGGCGACGTTG 1436
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1370 AGAATCTGTGCCGGTTTAAGTTTAGGGTTACGTACGATTCAGTTTCTTACGGCGACGTTG 1429
Query 1437 GTTCAAGGATTTGATTGGGAATTAGCCGGAGGTA-TTACGCCGGAGAAGCTGAATATGGA 1495
|||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||
Sbjct 1430 GTTCAAGGATTTGATTGGGAATTAGCTGGAGG-AGTTACGCCGGAGAAGCTGAATATGGA 1488
Query 1496 GGAGAGTTATGGGCTTACTTTGCAAAGAGCGGTTCCTTTGGTGGTGCATCCTAAGCCAAG 1555
|||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 1489 GGAGAGTTATGGGCTTACACTGCAAAGAGCGGTTCCTTTGGTGGTACATCCTAAGCCAAG 1548
Query 1556 GTTGGCTCCGAATGTTTATGGAATCGGGTCGGGTTAAAATCTAA-TGTTGCTTCTCGGCC 1614
|||||||||||| ||||||||| ||||||||||||||||| ||| | |||||||| || |
Sbjct 1549 GTTGGCTCCGAACGTTTATGGACTCGGGTCGGGTTAAAATTTAACT-TTGCTTCTTGGAC 1607
Query 1615 AAGGCATAGGGCTTGCACGAAAATAAA-----A---CAGCGTAATTTGATCCGGAATTAG 1666
|||| ||| |||||||||||||||||| | ||||||| ||||||||||| ||||
Sbjct 1608 AAGGTATATGGCTTGCACGAAAATAAAGTTTTAAAACAGCGTAGTTTGATCCGGAGTTAG 1667
Query 1667 CTTAATGTAAGAACGTGTAGTAACGCCAAATCAAGTAATTATTAAATATTGTTGTGAGTT 1726
||| ||||||||||||||| | ||||||||||||| ||||||||||||||| | ||||
Sbjct 1668 CTTTATGTAAGAACGTGTA--A-CGCCAAATCAAGTCATTATTAAATATTGT-G--AGTT 1721
Query 1727 GTTTGTAACCTATAATGTAATTATTTATCTTGAAGAGGAAGATTTCTGAAATCTTGAATA 1786
|||||||||||||| | ||| || |||||||||||||||||| |||||||||||||
Sbjct 1722 GTTTGTAACCTATA-TATAA--AT----CTTGAAGAGGAAGATTTCAGAAATCTTGAATA 1774
Query 1787 TGTTTTA 1793
|||||||
Sbjct 1775 TGTTTTA 1781
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88854964650
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5