BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487657
Length=4402
Score E
Sequences producing significant alignments: (Bits) Value
AT5G08230.1 | Symbols: | Tudor/PWWP/MBT domain-containing prot... 4207 0.0
AT5G23150.1 | Symbols: HUA2 | Tudor/PWWP/MBT domain-containing ... 837 0.0
> AT5G08230.1 | Symbols: | Tudor/PWWP/MBT domain-containing protein
| chr5:2641394-2649788 REVERSE LENGTH=5082
Length=5082
Score = 4207 bits (2278), Expect = 0.0
Identities = 2717/2920 (93%), Gaps = 65/2920 (2%)
Strand=Plus/Plus
Query 834 TAACATTGCCAGTTCTaaaaagccaaaagaattgctgaaagagaaacctgtgaagaaaaa 893
||||||||||||||||||||||||||||||||||||| || || | |||||||||
Sbjct 900 TAACATTGCCAGTTCTAAAAAGCCAAAAGAATTGCTG-AA-AG--A-----GAAGAAAAA 950
Query 894 gagatttgaaagtgaaCTAGGAAAGTCTGCATCAGGAGCAGATGAAAGTAAACGTGCTGC 953
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 951 GAGGTTTGAAAATGAACTAGGAAAGTCTGCATCAGGAGCAGATGAAAGTAAACGTGCTGC 1010
Query 954 TAAGAGGCCACGTTCTGAAGATGCGAAAGATCAAAAGCAATGTGAGAGCAACCGTCTTCT 1013
|||||||||||| |||||||||||||| |||||||| |||||| ||||||| |||||| |
Sbjct 1011 TAAGAGGCCACGGTCTGAAGATGCGAAGGATCAAAAACAATGTAAGAGCAAACGTCTTGT 1070
Query 1014 TCCTGTTGGTGAAGGCAAGGCTGAAGGATCTGATTCTACTGGCGTTGTATCAATTCTAAA 1073
||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||
Sbjct 1071 TCCTGTTGGTGAAGGCAAGGCTGAAATATCTGATTCTACTGGCGTTGTATCAATTTTTAA 1130
Query 1074 GCGTGAGATTGTGTTAGGGATAAGTGCCCTGGGAGGAAAAAATCAATTTGATAAGGACAT 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1131 GCGTGAGATTGTGTTAGGGATAAGTGCCCTGGGAGGAAAAAATCAATTTGATAAGGACAT 1190
Query 1134 GGTCGCTTATACAAAGCGCAGGAAACAGACAGTGGAGCACACAAGTGTTTCCTCTTTTTC 1193
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 1191 GGTCGCTTATACAAAGCGCCGGAAACAGACAGTGGAGCACACAAGTGTTTCCTCTTTTCC 1250
Query 1194 TGGGTCTCTCGTTAAAGAGAGGACAAATCA-CC--AACAGAAGATGAGTTCATCTTCTGA 1250
||||||||||||||||||| || ||||||| || |||||||||| ||||||||||||||
Sbjct 1251 TGGGTCTCTCGTTAAAGAGGGGGCAAATCACCCTGAACAGAAGATAAGTTCATCTTCTGA 1310
Query 1251 TAGCGATGTGAAGGTTCAAGCTGCTCAGCTGCCGAAGAGACGGAGGGCGGTATGTATCTA 1310
||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1311 TAGCGATATCAAGGTTCAAGCTGCTCAGCTGCCGAAGAGACGGAGGGCGGTTTGTATCTA 1370
Query 1311 TGACgatgatgatgatgatgaAGACCCAAAGACTCCAGTGCATGGAGGACATACCGATAT 1370
|||||| ||||||||||||||||||||||||||||||||||||||||||| || | ||||
Sbjct 1371 TGACGACGATGATGATGATGAAGACCCAAAGACTCCAGTGCATGGAGGACTTAGCAATAT 1430
Query 1371 TCCCAAAGCTAATTTAGCTACTACTGTTGGTCCTAAAAGTACTAATGCATCCCATAATAC 1430
| || | | ||||| |||||| || |||||||||| ||||||| |||||||||||
Sbjct 1431 T-CC----C--A--TAGCTTCTACTGATGCTCCTAAAAGTGCTAATGCGTCCCATAATAC 1481
Query 1431 TTCTATTAAAGCAAAGCTATTAGCTGGATCTGCAGAAAGTGCGAAAACAGGGAAAGTACC 1490
||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||||||
Sbjct 1482 TTCTATTAAAGCAAAACTATTAGCTGGATCTACAGACAGTGTGAAAACAGGGAAAGTACC 1541
Query 1491 TCTGTATAAACATAACAAGGATGCTTCACTTGCACTACCTGATAGGGTGGAAGGGTATAA 1550
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 1542 TCTGTATAAACATAACAAGGATGCTTCACTTGCACTACCTGATAGCGTGGAAGGATATAA 1601
Query 1551 CTCACCTATGGGAAAACCTGTCAAGGCGTTGCTCCCAAAGAATATCAAGCCGATCTTGAG 1610
||||| ||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||
Sbjct 1602 CTCACGTATGGGAAAACCTTTCAAGGCGTTGCTCCAAAAGAACATCAAGCCGATCTTAAG 1661
Query 1611 ATCTCCTAAGAATTCCTATCAGCTGGTTTCATTTAAGAAACAGGTGACAGGACAAAATAA 1670
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1662 ATCTCCTAAGAATTCTTATCAGCTGGTTTCATTTAAGAAACAGGTGACAGGACAAAATAA 1721
Query 1671 AACTGCAAAAGTCTCTGGTGCAGGAATGCCAGATAGCGTGGAGGGCCCTTCAAACAGCCC 1730
||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 1722 AACTGCAAAAGTCGCTGGTGCAGGAATGCCAGATAGTGTGGAGGGCCCTTCAAACAGCTC 1781
Query 1731 CTCTATGGGAAAACCAGTCATCAAGTTACCTCCACAGAATGTCAAGCAGATCTTGAGATC 1790
|| |||||| |||||||||||||| || || ||||||||||||||||||| |||||||||
Sbjct 1782 CTATATGGGTAAACCAGTCATCAAATTGCCCCCACAGAATGTCAAGCAGACCTTGAGATC 1841
Query 1791 TCCTAAGAAGTCCCCTCAGTTGTTTTCAACTAAGGAGCTGGTGGCAGGACAGAATAAAAT 1850
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 1842 TCCTAAGAAGTCCCCTCAGTTGTTTTCAACCAAGGAGCTGGTGGCAGTACAGAATAAAAT 1901
Query 1851 TGCAAAAGTCTCTGGTGCGGGGATGCCaaaaaaaTATCAAGGTGATTCTTCCAAGGACGC 1910
||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct 1902 TGCAAAAGTCTCTGGTGCGGGCATACCAAAAAAATATCATGGTGATTCTTCCAAGGACGT 1961
Query 1911 AGTGGCTGGTTCTGATAGAGTAAGCTCTTCTCATTCTCAGACAGCAAATCAGAGAAGCAA 1970
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1962 AGTGGCTGGTTCTGATAGAGTAAGCTCTTCTCATTCTCAGACAGCAAACCAGAGAAGCAA 2021
Query 1971 ACCAGCTTTTGGGGAAAAGCCAAC-AGGCACTCCGAAAGTTGCAACTCGCAGTCGTCTGG 2029
|||||||||||| ||||||||||| | |||||||||||||||||| | |||||| |
Sbjct 2022 ACCAGCTTTTGGAGAAAAGCCAACTA-GCACTCCGAAAGTTGCAA----C--TCGTCT-G 2073
Query 2030 ACGATGTTGAAGTGTCAAGGGACACTTCTGTGAACTTGTCTGCTGACGTGATTGATGTCA 2089
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2074 --GATGTTGAAGTGTCAAGGGACACTTTTGTGAACTTGTCTGCTGACGTGATTGATGTCA 2131
Query 2090 ATCAAGAAAATGGAAGTGCCCCATTGATCAGTTTTGGGATG-CGAGA---TTCTTCATCA 2145
||||||||||||||| |||||||||| |||||||||||||| | ||| |||||| |||
Sbjct 2132 ATCAAGAAAATGGAAATGCCCCATTGTTCAGTTTTGGGATGTC-AGATTCTTCTTCTTCA 2190
Query 2146 TCTATGAAGGATCTAATTGCAGCTGCCCAAGCAAAAAGAAAACAAGCACATTCACA-TAC 2204
| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 2191 TGTATGAAGGATCTAATTGCAGCTGCCCAGGCAAAAAGAAAACAAGCACATTCACAGT-T 2249
Query 2205 TTCACCGTTTGTGAATCTAGACCATAATTCCCTTACCATCGATTCAATGCAGTCGAGCCA 2264
||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||| |
Sbjct 2250 TTCACCGTTTGTGAATCTAGACCATAATTCCCTTAACATCGATTCGATGCAGACGAGTAA 2309
Query 2265 AAGCCCTTTCATGGTTCAAAATGTTTCATCTTCTACTGGCGATGCCATGCTGATTGTTGC 2324
|||||||||||||||||| |||||||||||| || ||| |||||||| ||||||||||||
Sbjct 2310 AAGCCCTTTCATGGTTCAGAATGTTTCATCTCCTGCTGCCGATGCCACGCTGATTGTTGC 2369
Query 2325 TCAGGAACATCAAGAAGATTCGACTCTGTCAAATCATGGCCGCCAGTCCTCATCAAGTAG 2384
||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||
Sbjct 2370 TCAGGAACATCAAGAAGTTTTGACTCCGTCAAATCATGGCCGCCAGTCCTCATCAAGTAA 2429
Query 2385 CCAAGCTGGGACTGAAGAGAATGAAGAGAGAAGGTTTAGTTCAGGGCATAGGTCAGGTGG 2444
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 2430 CCAAGCTGGGACTGAAGAGAACGAAGAGAGAAGGTTTAGTTCAGGGCATAGGTCAGTTGG 2489
Query 2445 TGGTTCACTGAGTGGTGCCACTGAGGCTGCGATAACTCGAGATACTTTTGAGGGAATGAT 2504
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2490 GGGTTCACTGAGTGGTGCCACTGAGGCTGCGATTTCTCGAGATACTTTTGAGGGAATGAT 2549
Query 2505 AGAGACTTTATCCAGAACTAAGGAAAGTATTAGACGTGCAACACGCCTGGCAATTGATTG 2564
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 2550 AGAGACTTTATCCAGAACTAAGGAAAGTATTAGACGTGCAACACGCGTTGCAATTGATTG 2609
Query 2565 TGCCAAGTATGGGATTGCCAGTGAGGTTGTGGAACTTCTCATTCGAAAGTTGGAAATTGA 2624
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 2610 TGCCAAGTATGGGATTGCCAATGAGGTTGTGGAACTTCTAATTCGAAAGTTGGAAATTGA 2669
Query 2625 GCCTCATTTTCCCCGAAAAGTGGACCTGTTCTTTCTTCTTGATTCGATCATCCAGTGTTC 2684
||||||||||||||| ||||||||| |||||||||| ||||||||||| |||||| ||||
Sbjct 2670 GCCTCATTTTCCCCGTAAAGTGGACTTGTTCTTTCTCCTTGATTCGATTATCCAGAGTTC 2729
Query 2685 CCATAGCCAAAAAGGTAGAGCCG-GCTCTTCATATATTCCTACTGTTCAGGCAGCCCTTC 2743
||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||
Sbjct 2730 ACATAGCCAAAAAGGTAGAG-CGCGCTCTTTGTATATTCCTACTGTTCAGGCAGCCCTTC 2788
Query 2744 CGCGCCTTCTAGGTGCTGCTGCTCCTCCAGGGACTGGTGCTCGTGAAAATCGTCATCAAT 2803
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2789 CACGCCTTCTAGGTGCTGCTGCTCCTCCAGGGACTGGTGCTCGTGAAAATCGTCATCAAT 2848
Query 2804 GTCGCAAGGTGTTGAGGTTGTGGCTTAAAAGGAAGATTTTCCCAGATTCTCTTTTGCGTC 2863
|||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||
Sbjct 2849 GTCGCAAGGTGTTGAGGTTGTGGCTTAAGAGGAAAATTTTCCCAGATTTTCTTTTGCGTC 2908
Query 2864 GTTATATTGGTGATCTTGGTGCTTCTGGTGATGATAAAACCGTTGGGTTTTCCCTACGAC 2923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2909 GTTATATTGGTGATCTTGGTGCTTCTGGTGATGATAAAACCGTTGGGTTTTCCCTACGAC 2968
Query 2924 GTCCTTCTAGATCTGAGCGTGCTGTAGATGATCCTCTACGGGACATGGAAGGGATGCTTG 2983
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2969 GTCCTTCTAGATCTGAGCGTGCTGTAGATGATCCTCTAAGGGACATGGAAGGGATGCTTG 3028
Query 2984 TCGACGAGTATGGGAGCAATGCAAGTTTTCAGCTGCCGGGGTATTTATCTTCTCACACTT 3043
| |||||||||||||||||||||| |||||||||||| ||||||||| |||||| ||||
Sbjct 3029 TTGACGAGTATGGGAGCAATGCAAATTTTCAGCTGCCAGGGTATTTAGCTTCTCTTACTT 3088
Query 3044 TTGGAGATGATGAAGAAGATGAGGATCTTCCAAGCACATCACAGGAAGTTAAACACACAC 3103
||||||||||||||||||| | | ||||||||||||||||||||||||||||| ||||||
Sbjct 3089 TTGGAGATGATGAAGAAGA-G-G-ATCTTCCAAGCACATCACAGGAAGTTAAAAACACAC 3145
Query 3104 ATATGGAAG--A-------------G------CCAGTCCATGCTTTAGGCAAGTTAGAGG 3142
||||||||| | | ||||||| ||||||||||||||||||||
Sbjct 3146 ATATGGAAGTTAAAATCACACACATGGAAGAGCCAGTCCTTGCTTTAGGCAAGTTAGAGG 3205
Query 3143 CTCATGGTAGTTCGAGTGATAAATCTCACTGTGTAGTGGATGTCAATGGTGGGCTTGAAT 3202
| |||| |||||| ||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 3206 CACATGATAGTTCAAGTGATAAACCTCACTGTGTAGTGGATGTTAATGGTGGGCTTGAAA 3265
Query 3203 TGAAAGATGCGTCTTGTCAGCTTAAAGATGATGTCCGTGGGATTGAAGCGAAGGAGGACT 3262
|| ||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct 3266 TGGAAGATGCGTCTTGTCAGCTGAAAGATGATGTCTGTGGGATTGAAGCGAAAGAGGACT 3325
Query 3263 CACCGGCTGCAACCTGTGCAACTGAGCTTCCTTCTTTTTCAGCGGGTtctcctcctctac 3322
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3326 CACCGGCTACAACCTGTGCAACTGAGCTTCCTTCTTTTCCAGCGGGTTCTCCTCCTCTAC 3385
Query 3323 ctcacgaatcgcctccatctccccctcctctacctccttcttcccccccacccccATCAT 3382
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 3386 CTCACGAATCGCCTCCATCTCCCCCTCCTCAACCCCCTTCTTCCCCCCCACCCCCATCAT 3445
Query 3383 CTCCACCGCAGCTGCCACCAGTGCCACCTCCCTCCGAGCATTGTTTACCTCCACCAGCAG 3442
|||||||||| ||| |||||| ||||||||||| || |||||||||||||||||| |||
Sbjct 3446 CTCCACCGCAACTGGCACCAGCACCACCTCCCTCTGATCATTGTTTACCTCCACCAACAG 3505
Query 3443 CTCCATTGGCACCTGCACAATCTATAGCTCTACCACCATCATCAATAACTCGACCGTCCA 3502
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3506 CTCCATTGGCACCTGCACAATCTATCGCTCTACCACCATCATCAATAACTCGACCGTCCA 3565
Query 3503 TGCCTAGCCATCCTTCATTACCACTTCAACCAGGATTCGCTCCCCCAGCATATCCATTAT 3562
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3566 TGCCTAGCCATCCTTCATTACCACTTCAACCAGGATTCGCTCCCCCAGCATATCCACTAT 3625
Query 3563 TGCAACATGAATACCAGATATCTATGCAGCGGGATCATTCTAGCATTGCCACTAGTAATC 3622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3626 TGCAACATGAATACCAGATATCTATGCAGCGGGATCATTCTAGCATTGCCACTAGTAATC 3685
Query 3623 AAATTGTCCAAGTGCCCGTAAACGGTGCACATGGAAGGCATGCTGATGGGGGTGTAAAAT 3682
|||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3686 AAATTGCCCCAGTGCCCGTAAACGCTGCACATGGAAGGCATGCTGATGGGGGTGTAAAAT 3745
Query 3683 CTGAATATTTATTACCGCAGTCATCTTGTTTTGCTCCGGT 3722
||||||||||| | ||||||||||||| ||||||||||||
Sbjct 3746 CTGAATATTTAATGCCGCAGTCATCTTCTTTTGCTCCGGT 3785
Score = 1186 bits (642), Expect = 0.0
Identities = 780/845 (92%), Gaps = 15/845 (2%)
Strand=Plus/Plus
Query 1 ATGGCTCCTGGGCGTAAAAGAGGAGCGAACAAAGCCATGGCCATAGGAGCGCTGAGATTG 60
||||||||||||||||||||||||||||||||||| ||||| ||||||| | ||||||||
Sbjct 1 ATGGCTCCTGGGCGTAAAAGAGGAGCGAACAAAGCTATGGCGATAGGAGAGATGAGATTG 60
Query 61 GGTGATCTCGTTCTTGCTAAAGTCAAAGGCTTCCCTGCTTGGCCTGCTAAGATCGGCCAG 120
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 61 GGTGATCTCGTTCTTGCTAAAGTTAAAGGATTCCCTGCTTGGCCTGCTAAGATCGGCCAG 120
Query 121 CCTGAAGATTGGAATCAAGCTCCAGACCCAAAGAAACACTTTGTTCAGTTTTTCGGAACA 180
|||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||
Sbjct 121 CCTGAAGATTGGAATCAAGCACCAGACCCAAAGAAACACTTCGTTCAGTTTTACGGAACA 180
Query 181 CAGGAAATAGGTTTTGTTGCGCCACCTGATATTCAACCCTTCACTAGCGAGGCAAAGAAT 240
|||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||
Sbjct 181 GGGGAAATAGGTTTTGTTACGCCTCCTGATATTCAACCCTTCACTAGCGAGACAAAGAAG 240
Query 241 AAACTATTAGCAAGATGTCAAGGTAAAACAGCCAAGTACTTTTCACAAGCCGTGGAGGAA 300
||||| | |||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 241 AAACTGTCGGCAAGATGTCAAGGTAAAACAGTCAAGTACTTTTCCCAAGCCGTGGAGGAA 300
Query 301 ATCTCTGCTGCATTTGAAGAGTCGCAGAATCACAAGTCAGATATAGTAGGTAATGAGGCT 360
||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct 301 ATCTCTGCTGCGTTTGAAGAGTCGCAGAAGCAAAAGTCAGATATAGTAGGCAATGAGGCT 360
Query 361 CTTTTGAATGCTGTTGAACCTAGTGTGACGAAGCCTAAGATATT-GAATCAAGCTAGTAG 419
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 361 CTTTTGAATGCTGTTGAACCTAGTGTGACGAAGCCTAAG-TATTTGAATCAAGCTAGTAG 419
Query 420 TGATGGAAAATCTGATAAGTTTGACT-CTAGGGCGGATCCTTGTCTTGGTAAATTAGTTG 478
|||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||
Sbjct 420 TGATGGAAAATCTGATAAGTTT-AGTTCTAGGGCGGATCCTTGTCTTGGTAAATTAGTTG 478
Query 479 AGAATAATGGTGCAGAGAAAAAGCCTGATATAGGAGATCA-GAATCTATCGAAATCAAAT 537
|||||||||||||||||| ||| |||||| ||||||| || || || ||||| |||||||
Sbjct 479 AGAATAATGGTGCAGAGATAAATCCTGATGTAGGAGAGCAAGATTC-ATCGATATCAAAT 537
Query 538 AACAGAACCACATCCCCAAGTAGTGAGCCATTGGAGCATGGATCACCTGACCCTATTTTA 597
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 538 AACAGAAACACATCCCCAAGTAGTGAGCCAGTGGAGCATGGATCACCTGACCCTATTTTA 597
Query 598 ATGGTAGCAGTTGTTGATAAAATTGACGGTGTCACTTGCACTGACCATAGTGATGGTACT 657
| ||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 598 AAGGTAGCAGTTGATGATAAGATTGACAATGTCACTTGCACTGACCATAGTGATGGTACT 657
Query 658 GGAAAGAATTCGGTCAATGATCAGAGGATAATCAGGAAGATAACAGGTGACTCGAATAAA 717
||||| |||| |||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 658 GGAAATAATTTAGTCAATGATCAGAGGATAATCAGGAAGACAACAGATGACTCGAATAAA 717
Query 718 -GATG-A--G-T----TTAGAGCCAAAAGTGTACCTGATAGTCGAGCTGCTACAGACAAT 768
|||| | | | ||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 718 AGATGTAAAGATGAGGTTAGAGCCAAACGTGTGCCTGATAGTCGAGCTGCTACAGACAAT 777
Query 769 CATCTCCTTGGTCCTAATCAGAAATTAAAGGGCAGTAAAAAGGGACAAGATCATAGTAGT 828
||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | |||
Sbjct 778 CATATCCTTGGTCCTAATCAGAAATTAAAGGGCAGTATAAAGGGACAAGATCATGGCAGT 837
Query 829 AGAAA 833
| |||
Sbjct 838 AAAAA 842
Score = 1085 bits (587), Expect = 0.0
Identities = 652/683 (95%), Gaps = 6/683 (1%)
Strand=Plus/Plus
Query 3721 GTGCTTTTTAAACATGAAGCGTCTTCACAGAACCAACAGCTTCGGCCAATCAATACCTCT 3780
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3856 GTGCTTTTTAAACAAGAAGCGTCTTCACAGAACCAACAGCTTCGGCCAATCAATACCTCT 3915
Query 3781 TTTCTTCAGAGACCTATGATTAGGAATCTCGCCCCAGCACCATCCAGCCATTTTCCGCTT 3840
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3916 TTTCTTCAGAGACCTATGATTAGGAATCTTGCCCCAGCACCATCCAGCCATTTTCCGCTT 3975
Query 3841 CCATGTCGGATTGTTCAATCAGAACCCCAGCGGTCCTCCTTTCCACATCCTTACCCTTTT 3900
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 3976 CCATGTCGAATTGTTCAATCTGAACCCCAGCGGTCCTCCTTTCCACATCCTTACCATTTT 4035
Query 3901 CCTTCCCAGCCAGTTGATGGGCGACGACATATGAATGAGGAAGCATGGCGGATGCCTTCA 3960
||||||||||||||||||||||||| |||||||||||||| | ||||||||||||| ||
Sbjct 4036 CCTTCCCAGCCAGTTGATGGGCGACAACATATGAATGAGG-A--ATGGCGGATGCCTCCA 4092
Query 3961 AATGGATGTAATGCAGATACTCAATATGGAGCCTGGATAAGTGGAAGAAACCCATTTCCA 4020
|||||||||| ||||||| |||||||||||||||||||| ||| ||||||||||||||||
Sbjct 4093 AATGGATGTAGTGCAGATCCTCAATATGGAGCCTGGATAGGTGTAAGAAACCCATTTCCA 4152
Query 4021 GGCTCTCTTACAGTTACCGACGGTTTCTTTCAGCCACCTCCAGAAAGACCACCTTCGGGG 4080
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 4153 GGCTCTCGTACAGTTACCGACGGTGTCTTTCAGCCACCTCCAGAAAGACCACCTTCGGGG 4212
Query 4081 ACTA-TGAGCTATCAGCTTGCTGCTAATAACTTCCAAGGTGGCCCTACGATTTCAGGTAA 4139
|| | |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct 4213 AC-AGTGAGGTATCAGCTTGCTGCTAATAACTTACAAGGTGGCTCTACGATTTCAGGTAA 4271
Query 4140 TATTGCTTCGCAGATGCTTCCGTCTCGGCCAGACGTACCTTCCGCGGCTCGGTGGAGGCC 4199
|||||||||||||||||||| |||||| ||||| |||||||||||||||| || |||||
Sbjct 4272 TATTGCTTCGCAGATGCTTCTGTCTCGACCAGATGTACCTTCCGCGGCTCAGTACAGGCC 4331
Query 4200 ATCCTGAAGTTAAGTTCGAAATAGAGAACCTGCATTCTCTTCCATGAAGGACATTTTTGG 4259
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 4332 ATCCTGAAGTTAAGTTCGAAATCGAGAACCTGCATTCTCTTCCATGAAGGAC-TTTTTGG 4390
Query 4260 CGGTATATTCACATCCAGAGGCATCAAAAGTTCAAAACTCTGCAGACTATTGTCAGGATA 4319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4391 CGGTATATTCACATCCAGAGGCATCAAAAGTTCAAAACTCTGCAGACTATTGTCAGGATA 4450
Query 4320 TTGCTATATATTGTAATTGTTCCTGACGAATGTATCACCGGATCATATTCTTCACAGTAT 4379
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 4451 TTGCTATATATTGTAATTGTTCCTGACGAATGTATCACCGGATCATGTTCTTCACAGTAT 4510
Query 4380 ATGCCCTAGTTTCTAATTTGGTT 4402
||||||||| |||||||||||||
Sbjct 4511 ATGCCCTAGGTTCTAATTTGGTT 4533
> AT5G23150.1 | Symbols: HUA2 | Tudor/PWWP/MBT domain-containing
protein | chr5:7785835-7792489 FORWARD LENGTH=4926
Length=4926
Score = 837 bits (453), Expect = 0.0
Identities = 1091/1389 (79%), Gaps = 84/1389 (6%)
Strand=Plus/Plus
Query 1736 TGGGAAAA-CCAGTCATCAAGTTACCTCCACAGAATGTCAAGCAGATCTTG-AGATCTCC 1793
||| |||| ||| | || || || || ||| || ||||||| ||||||||| | ||||||
Sbjct 1906 TGGTAAAACCCATTAATGAA-TTGCCGCCAAAGGATGTCAAACAGATCTTGCA-ATCTCC 1963
Query 1794 TAAGAAGTCCCCTCAG-TTGTTTTCAACTAAGGAGCTGGTGGCAGGACAG----AA---- 1844
|||| |||||||||| | ||||| |||||| ||| || ||||||||| ||
Sbjct 1964 GAAGATGTCCCCTCAGCTGGTTTT-AACTAACAAGCACGTTGCAGGACAGCATAAAGTTG 2022
Query 1845 TAAAAT--T--GCAAAAGTCTCTGGTGCGGGGATGCCaaaaaaaTATCAAGGTGATTCTT 1900
|||||| | | ||||| ||||||| | |||| |||| || |||| |||||||||
Sbjct 2023 TAAAATCATCGGTGAAAGTTTCTGGTGTTGTGATGGCAAAGAAGCCTCAAAGTGATTCTT 2082
Query 1901 CCAAGGACGCAGTGGCTGGTTCTGATAGAGTAAGCTCTTCTCATTCTCAGACAGCAAATC 1960
||||| || || || || ||||| | | ||||||||||||| |||||| |||||||||
Sbjct 2083 GTAAGGAGGCGGTTGCGGGATCTGACAAAATAAGCTCTTCTCAGTCTCAGCCAGCAAATC 2142
Query 1961 AGAGA-AGCAAACCAGCTT---TTGGGGAAAAGCCAACAG-GCACTCCGAAAGTTGCAAC 2015
||||| | |||| |||||| |||| || | || ||||| | | | |||| ||| |
Sbjct 2143 AGAGACA-CAAATCAGCTTCAGTTGGAGAGAGGCTAACAGTG-GTTTCAAAAGCTGC-A- 2198
Query 2016 TCGCAGTCGTCTGGACGATGT-TGAAGTGTCAAGGGACACT-TCTGTGAACTTGTCTGCT 2073
| || ||| || | || | || || ||||| |||| | |||| | |||||||||||
Sbjct 2199 T--CA--CGTTTGAATGA-CTCTG--GT-TCAAGAGACA-TGTCTGAGGACTTGTCTGCT 2249
Query 2074 GAC-GTGATTGATGTCAATCA-AGAAAATGGAAGTGCCCCATTGATCAGTTTTGGGATGC 2131
| | || |||| ||||| | |||||| || ||||| |||| | |||| || |
Sbjct 2250 G-CTATGCTTGACCTCAAT-AGAGAAAAGGGGAGTGCTACATTTACCAGTGCAAAGACCC 2307
Query 2132 GAGATTCTTCAT-CATCTATGAAGGATCTAATTGCAGCTGCCCAAGCAAAAAGAAAACAA 2190
|||||| | | |||||||||||||||||||||| ||||| || |||||||||||||
Sbjct 2308 CAGATTCGGC-TGCATCTATGAAGGATCTAATTGCTGCTGCGCAGGCAAAAAGAAAACTT 2366
Query 2191 GCACATTCACATACTTCACCGTTTGTGAATCTAG-ACCATAATTCCCTT-ACCATC---G 2245
|||||| |||| | |||| |||| |||| | | ||| || || ||| | |||| |
Sbjct 2367 GCACATACACAAAATTCAATTTTTGGGAAT-TTGAACCCTAGTT-TCTTGAGCATCAGTG 2424
Query 2246 ATTCA-ATGCAGTCGAGCCAAAGCCC-TTTCATGGTTCAAAATGTTTCATCTTCTACTGG 2303
|| || | | | |||||| ||||| ||| |||||||| |||| |||| ||||| || |
Sbjct 2425 ATACACA-GGGGAGGAGCCATAGCCCATTT-ATGGTTCAGAATGCTTCAGCTTCTGCT-G 2481
Query 2304 CGATGC-C-ATGCTGATT-GTTGCTC-AGG--AACATCAAGAAGATTCGACTCTGTCAAA 2357
| || | | |||| | || |||| || ||| | |||||| ||| ||| ||| ||||||
Sbjct 2482 CCAT-CTCAATGCCG-TTAGTTGTTCAAGGTCATCATCAACAAGGTTCTTCTCCGTCAAA 2539
Query 2358 TCATGGCCGCCAGTCCTCATCAAGTAGCCAAG-CTGGGACTGAAGAGAATGAAGAGAGAA 2416
|||||| | ||||||| |||||| | | || || |||||| || |||||||||||||
Sbjct 2540 TCATGGGCATCAGTCCTTATCAAGAAATC-AGATTGAGACTGATGATAATGAAGAGAGAA 2598
Query 2417 GGTTTAGTTCAGGGCATAGGTCAGGTGGTGGTTCACTGAGTGGT-GCCACTGAGGCTGCG 2475
| ||||||||||||||| ||||| ||| |||||||| ||| || | ||||||||||||
Sbjct 2599 GACTTAGTTCAGGGCATAAGTCAGTTGGAGGTTCACTTAGTTGTAG-CACTGAGGCTGCT 2657
Query 2476 ATAACTCGAGATACTTTTGAGGGAATGATAGAGACTTTATCCAGAACTAAGGAAAGTATT 2535
|| |||| ||| ||||||| || ||| ||||||| ||||| ||||| | ||||||||||
Sbjct 2658 ATTTCTCGGGATGCTTTTGAAGGCATGTTAGAGACCTTATCAAGAACCAGGGAAAGTATT 2717
Query 2536 AGACGTGCAACACGCCTGGCAATTGATTGTGCCAAGTATGGGATTGCCAGTGAGGTTGTG 2595
|||||||||| ||||| |||||||||||||||||||||||| |||| |||||||| |||
Sbjct 2718 GGACGTGCAACTCGCCTAGCAATTGATTGTGCCAAGTATGGGCTTGCTAGTGAGGTGGTG 2777
Query 2596 GAACTTCTCATTCGAAAGTTGGAAATTGAGCCTCATTTTCC-CCGAAAAGTGGACCTGTT 2654
||||||||||| ||||||||||||| ||| |||| |||| || ||||||||| ||||
Sbjct 2778 GAACTTCTCATACGAAAGTTGGAAAGTGAATCTCA-CTTCCATCGTAAAGTGGACTTGTT 2836
Query 2655 CTTTCTTC-TTGATTCGATCATCCAGTGTTCCCATAGCCAAAAAGGTAGAGCCGGCT-CT 2712
||||| || | || || |||| |||| ||| || ||||||||||||| || || | ||
Sbjct 2837 CTTTC-TCGTCGACTCTATCACCCAGCATTCGCACAGCCAAAAAGGTATTGCTGG-TGCT 2894
Query 2713 TCATATATTCCTACTGTTCAGGCAGCCCTT-CCGCGCCTTCTAGGTGCTGCTGCTCCTCC 2771
|| || |||||||||| || || | | || || || ||| ||||||| |||||||||||
Sbjct 2895 TCTTACGTTCCTACTGTGCAAGCTG-CTTTGCCACGTCTTTTAGGTGCCGCTGCTCCTCC 2953
Query 2772 AGGGACTGGTGCTCGTGAAAATCGTCATCAATGTC-GCAAGGTGTTGAGGTTGTGGCTTA 2830
||||||||||||| |||| || |||| | |||||| | ||||| ||| ||||||||||
Sbjct 2954 AGGGACTGGTGCTAGTGATAACCGTCGTAAATGTCTG-AAGGTCCTGAAGTTGTGGCTTG 3012
Query 2831 AAAGG-AAGATTTTCCCAGATTCTCTTTTGCGTCGTTATATTGGTGATCTTGGTGCTTCT 2889
||||| ||| ||||||| || |||||| ||||||||||||||| |||| || | ||||||
Sbjct 3013 AAAGGAAAG-TTTTCCCTGAATCTCTTCTGCGTCGTTATATTGATGATATTAGAGCTTCT 3071
Query 2890 GGTGATGATAAAACCGTTGGGTTTTCCCTACGACGTCCTTCTAGATCTGAGCGTGCTGTA 2949
||||||||| ||| | |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3072 GGTGATGATGCAACTGGTGGGTTTTCCCTGCGACGTCCTTCTAGATCTGAGCGTGCTGTA 3131
Query 2950 GATGATCCTCT-ACGGGACATGGAAGGGATGCTTGTCGACGAGTATGGGAGCAATGCAA- 3007
||||||||| | | |||| ||||||||||||||||| || |||||||| ||||||||||
Sbjct 3132 GATGATCCTATCA-GGGAAATGGAAGGGATGCTTGTTGATGAGTATGGCAGCAATGCAAC 3190
Query 3008 GTTTTCAGCTGCCGGGGTATTTATCTTCTCACACTTTTGGAGATGATGAAGAAGATGAGG 3067
|||| |||||||| |||| ||| || ||||| | ||||| |||||||||||||||||| |
Sbjct 3191 GTTT-CAGCTGCCAGGGTTTTTTTCATCTCATAATTTTGAAGATGATGAAGAAGATGACG 3249
Query 3068 ATCTTCCAA 3076
|||||||||
Sbjct 3250 ATCTTCCAA 3258
Score = 416 bits (225), Expect = 8e-115
Identities = 538/682 (79%), Gaps = 50/682 (7%)
Strand=Plus/Plus
Query 1 ATGGCTCCTGGGCGTAAAAGAGGAGCGAACAAAGCCATGGCCATAGGAGC-GCTGAGAT- 58
|||||||||||||||||||||||||||| ||| |||| |||| ||| || | || | |
Sbjct 339 ATGGCTCCTGGGCGTAAAAGAGGAGCGAGCAAGGCCAAAGCCAAAGG-GCAGTTG-GTTC 396
Query 59 TGGGTGATCTCGTTCTTGCTAAAGTCAAAGGCTTCCCTGCTTGGCCTGCTAAGATCGGCC 118
| |||||||| ||||| || ||||||||||||||||||||||||||||| |||||| |||
Sbjct 397 TCGGTGATCTGGTTCTCGCCAAAGTCAAAGGCTTCCCTGCTTGGCCTGCCAAGATCAGCC 456
Query 119 AGCCTGAAGATTGGAATCAAGCTCCAGACCCAAAGAAACACTTTGTTCAGTT-TTTCGGA 177
||||||||||||| ||| || |||||||||||||| ||||||||||||| ||| |||
Sbjct 457 GGCCTGAAGATTGGGATCGTGCGCCAGACCCAAAGAAGTACTTTGTTCAGTTCTTT-GGA 515
Query 178 ACACAGGAAATAGGTTTTGTTGCGCCACCTGATATTCAACCCTTCACTAGCGAGGCAAAG 237
||| ||||||||| ||||||||||||||||||||| ||| |||||||||| |||||||||
Sbjct 516 ACAGAGGAAATAGCTTTTGTTGCGCCACCTGATATCCAAGCCTTCACTAGTGAGGCAAAG 575
Query 238 AATAAACTATTAGCAAGATGTCAAGGTAAAACAGCCAAGTACTTTTCACAAGCCGTGGAG 297
| ||||||||||||||||||||||||||||| | |||||||||| ||||||| || |||
Sbjct 576 AGCAAACTATTAGCAAGATGTCAAGGTAAAACTGTCAAGTACTTTGCACAAGCTGTAGAG 635
Query 298 GAAATCT-CTGCTGCATTTGAAGAGTCGCAGAATCACAAGTCAGATA-TAGTAGGTAATG 355
|||||| | |||||||||||| || |||||||||||||||| || | | || |||
Sbjct 636 CAAATCTGCA-CTGCATTTGAAGGGTTGCAGAATCACAAGTCAAATGCTT-TGGGCGATG 693
Query 356 AGGCT-CTTTTGAATGCTGTTGAACCTAGTGTGACGAAGCCTAAGATATTGAATC-AA-- 411
||| | || | || |||| ||||||| || |||| ||| || ||||| || || ||
Sbjct 694 AGGATTCTCTGGA-TGCTACTGAACCTGGTTTGACAAAGGCTGAGATAGTGGATGGAACA 752
Query 412 G--C-TA--GT-AGTGA-TG-GA-A-AATCTGATAAGTTTGACTCTAGGGCGGATCCTTG 461
| | || || | ||| | || | || ||||||| ||| | | ||||| |||||||||
Sbjct 753 GATCATATTGTCATTGAGTCTGAGAGAA-CTGATAACTTTAATTTTAGGGTGGATCCTTG 811
Query 462 TCTTGGT-AAATTAGTTGAGAATAATGGTGCAG-AGAAAAAGCCTGATATA-GGA-GATC 517
||| ||||||| |||||||||||||| || ||| |||| |||| ||| ||| | |
Sbjct 812 -CTTCCCCAAATTAGATGAGAATAATGGTG-AGGAGAGAAAGGCTGAGATAAGGAAGCT- 868
Query 518 AGA---ATCT--AT--C-GAAATCAAATAACAGAACCACATCCCCAAGT-AGTGAGCCAT 568
||| |||| || | | ||||||| || |||||||||||| || || ||| ||
Sbjct 869 AGATTCATCTTCATTTCTGGAATCAAAGGTCAAAACCACATCCCCT-GTTAGCGAGTCAC 927
Query 569 TGGAGCATGGATCACCTGACCCTATTTTAATGGTAGCAG-TTGTTGATAAA--AT-TGAC 624
|||||||| | ||| |||||||| ||| | || || || |||||||| | ||||
Sbjct 928 TGGAGCATAGTTCATTTGACCCTAAAATAAAGAAAGAAGATT-TTGATAAAGGAACTGAC 986
Query 625 GGT-GTCACTTGCACTGACCAT 645
||| || |||||| ||| |||
Sbjct 987 GGTAGTG-CTTGCAATGAACAT 1007
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 219480375625
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5