BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487674
Length=3228
Score E
Sequences producing significant alignments: (Bits) Value
AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfami... 4879 0.0
AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfami... 2294 0.0
AT5G08400.1 | Symbols: | Protein of unknown function (DUF3531)... 558 1e-157
> AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:2701013-2707273 FORWARD LENGTH=3242
Length=3242
Score = 4879 bits (2642), Expect = 0.0
Identities = 3078/3275 (94%), Gaps = 83/3275 (3%)
Strand=Plus/Plus
Query 1 TGTCTGTGTGTCATTCACATCTCTCTCCTCTCTTCTTCGCCATTAGA-G-GAG------- 51
||||||||||||||||||||||| |||||||||||||| |||||||| | |||
Sbjct 4 TGTCTGTGTGTCATTCACATCTCCCTCCTCTCTTCTTCACCATTAGAGGAGAGAAAACAC 63
Query 52 -------AA-A-A-ATATAAGT-TAACTCATCCAACAACTCCATTTTTTATCTTCTTCGT 100
|| | | |||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 64 ACTTTCAAATATATATATAAGTATAACTCATCCAACAACTCCA-TTTTTATCTTCTTCGT 122
Query 101 AAAGGCAACAACGACGTTTACTGCAAGATACTCTTCTTCATTCTGCATTCTTTTCCAATC 160
||||| |||||||||||||||| ||||||||| ||| ||| |||||||||||||||||||
Sbjct 123 AAAGGAAACAACGACGTTTACTCCAAGATACTGTTCCTCAATCTGCATTCTTTTCCAATC 182
Query 161 GATTTCAACCCCTCAAA-TTGGTTTCTGAGCTGCGATTGGGC-TTCTGGGTTTTTGTTGA 218
|| | || ||| |||||||||| |||| |||| ||| ||||||| | ||| |||
Sbjct 183 GA--T------CT-AAATTTGGTTTCTGTGCTGAGATT-GGCTTTCTGGG-TGTTGCTGA 231
Query 219 TTGC-AATTGCTGTT----TGTTGAGATCTTAAGTTGCTTTTGC--TA-CT-AG----CT 265
|||| |||||||||| | |||||||||||| ||||||||| || || || |
Sbjct 232 TTGCAAATTGCTGTTGACAAGCTGAGATCTTAAGGTGCTTTTGCAGTAGCTGAGATTTTT 291
Query 266 -G-GATTTTTGTCTGTTCGTGAGTAGAAGAATTTGGATGGTCGCCCATGTAAGGGTTTCG 323
| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 292 CGAGGTTTTTGTCTGTTCGTGAGTAGAAGAATTTGGATGGTCGCCGATGTAAGGGTTTCG 351
Query 324 TTTCCGCCATGAACACCAAGCGCGCCTACAAGCTCCAGGAATTTGTGGCACATTCTGCTG 383
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 352 TTTCCGCTATGAACACCAAGCGCGCCTACAAGCTCCAGGAATTTGTGGCACATTCTGCTG 411
Query 384 CTGTTAATTGTCTTAAGATTGGGAGGAAGTCCTCCAGGGTTCTCGTTACAGGCGGGGAAG 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 412 CTGTTAATTGTCTTAAGATTGGGAGGAAGTCCTCCAGGGTTCTCGTTACAGGCGGAGAAG 471
Query 444 ATCACAAGGTCAATCTATGGGCTATTGGTAAGCCCAACGCCATCCTGAGCTTGTATGGGC 503
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 472 ATCACAAGGTTAATCTATGGGCTATTGGTAAGCCCAACGCCATCCTGAGCTTGTATGGGC 531
Query 504 ACTCTAGTGGGATTGATTCAGTTACGTTTGATGCTTCGGAATGCTTAGTAGCAGCAGGAG 563
||||||| |||||||||||||| || ||||||||||||||| ||||||||||||||||||
Sbjct 532 ACTCTAGCGGGATTGATTCAGTAACATTTGATGCTTCGGAAGGCTTAGTAGCAGCAGGAG 591
Query 564 CTGCTAGTGGTACAATTAAACTTTGGGATCTCGAGGAGGCAAAGGTTGTCAGAACTCTCA 623
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 592 CTGCTAGTGGTACAATTAAACTTTGGGATCTGGAGGAAGCAAAGGTTGTCAGAACTCTCA 651
Query 624 CTGGTCACAGGTCGAACTGCGTATCCGTGAATTTTCACCCTTTTGGTGAGTTTTTTGCTT 683
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 CTGGTCACAGGTCAAACTGCGTATCCGTGAATTTTCACCCTTTTGGTGAGTTTTTTGCTT 711
Query 684 CTGGTTCTCTAGACACTAATCTCAAGATATGGGATATAAGAAAGAAGGGATGCATCCATA 743
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 712 CTGGTTCTCTAGACACAAATCTCAAGATATGGGATATAAGAAAGAAGGGCTGCATCCATA 771
Query 744 CTTACAAGGGTCACACTCGAGGGGTCAATGTACTCAGATTTACTCCAGATGGTCGTTGGA 803
||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||
Sbjct 772 CTTACAAGGGTCACACTAGAGGGGTCAACGTACTCAGATTCACTCCAGATGGTCGTTGGA 831
Query 804 TTGTATCTGGAGGAGAAGATAATGTTGTCAAGGTTTGGGATTTGACTGCTGGAAAACTTT 863
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 832 TTGTATCTGGAGGAGAAGATAATGTTGTCAAGGTGTGGGATTTGACTGCTGGAAAACTTT 891
Query 864 TGCATGAGTTTAAGAGTCATGAAGGGCAAATTCAGAGTCTAGATTTTCATCCCCATGAAT 923
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 892 TGCATGAGTTTAAGAGTCATGAAGGGAAAATTCAGAGTCTAGATTTTCATCCCCATGAAT 951
Query 924 TTCTGCTGGCAACAGGTTCAGCTGATAAGACTGTAAAATTCTGGGACCTTGAAACATTCG 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 952 TTCTGCTGGCAACAGGTTCAGCTGATAAGACTGTAAAATTCTGGGACCTTGAAACATTCG 1011
Query 984 AGCTTATTGGTTCTGGTGGAACTGAGACTACTGGGGTCCGTTGCCTGACCTTTAATCCAG 1043
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1012 AGCTTATTGGTTCTGGTGGAACTGAGACTACTGGGGTCCGTTGCCTAACCTTTAATCCAG 1071
Query 1044 ACGGAAAGAGTGTGCTTTGTGGATTGCAAGAAAGTCTCAAAATTTTCTCATGGGAGCCAA 1103
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1072 ATGGAAAGAGTGTGCTTTGTGGATTGCAAGAAAGTCTTAAAATTTTCTCATGGGAGCCAA 1131
Query 1104 TAAGACGTCATGATGGAGTGGATGTTGGATGGTCAAACTTGTCGGATATGAATGTTCACG 1163
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1132 TAAGATGTCATGATGGAGTGGATGTTGGATGGTCAAACTTGTCGGATATGAATGTTCACG 1191
Query 1164 AGGGAAAGCTTCTCGGTTGCTCATACAATCAAAATTGTGTTGGCGTTTGGGTTGTAGACC 1223
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1192 AGGGAAAGCTTCTCGGTTGCTCATACAATCAAAATTGTGTAGGCGTTTGGGTTGTAGACC 1251
Query 1224 TCTCGCGCCCTGAGCCTATGAGTGGAGGCGCCACTCAGTCAAATTCTCATCCAGAGAAAA 1283
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 TCTCGCGCACTGAGCCTATGAGTGGAGGCGCCACTCAGTCAAATTCTCATCCAGAGAAAA 1311
Query 1284 CATCGGGCTCAGGCAGAGATCAATCAGGTCTGAACGATAACAGCTCAAAGGTTATTCTCG 1343
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1312 CATCAGGCTCAGGCAGAGATCAAGCAGGTCTGAACGATAACAGCTCAAAGGTTATTCTCG 1371
Query 1344 GAAAGTTGTCTGGTTCCCAGAAAGTGGATCCTTTATTGAAGGAAACAAAGTCTCTTGGAA 1403
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1372 GAAAGTTGCCTGGTTCCCAGAAAGTGGATCCTTTATTGAAGGAAACAAAGTCTCTTGGAA 1431
Query 1404 AATTATCAGTTTCTCAAAACTCGGATCCTTTGCCAAAAGAAACAAAGTCTACTGGAAGGT 1463
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1432 AATTATCAGTTTCTCAAAACTCGGATCCGTTGCCAAAAGATACAAAGTCTACTGGAAGGT 1491
Query 1464 CATCA-TCATCTCAAAGTTCAGATCCTTTGGTAAAGGAACCAAAGCCTCTCGGAAGGTTG 1522
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1492 CATCAGT-ATCTCAAAGTTCAGATCCTTTGGTAAAGGAACCAAAGCCTCTCGGAAGGTTT 1550
Query 1523 TCAGTTACTCATCATAGCTCAGACGCAGTAAAAGAGTCAAGACCCCTGTCATCCACAGGA 1582
|||| |||||| || |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1551 TCAGCTACTCA-CA--GCTCAGACACAGTAAAAGAGTCAAGAACCCTGTCATCCACAGGA 1607
Query 1583 AGTGTATCAGACTCTCCTCACAGGGTTACGTTGACCAGTGCCCCAAAAAGTGCTTCTGGT 1642
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 1608 AGTGTATCAGACTCTCCTCACAGGGTTACTTTGACCAGTGCTCCAAAAAGTGCTTCTGGT 1667
Query 1643 ATTTCGACAGTTGTCCCCACTGCTGCAGCCTCAAAGAGAAATTTTGGAAAAGCTAACCCA 1702
||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 1668 ATTTCTACAGTTGTCCCTAATGCTGCAGCCTCAAAGAGAAATTTTGGAAAAGCTAACCCA 1727
Query 1703 AAGGCGAATCCTCCAGTAGTCAATAAAGAAGATTATTTTCCAGTAATTGTCCCCAGAACG 1762
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1728 AAGGCGAATCCTCCAGTAGTCAATAAAGAGGATTATTTTCCAGTAATCGTCCCCAGAACG 1787
Query 1763 GAGCCAATAATTGAGCAGGCATCTGAATTCAGAGCAGAACTTGACATTATTGGAAGAACT 1822
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 1788 GAGCCAATAATTGAGCAGGCATCTGAATCCAGAGCAGAACTTGACATTATCGGAAGAACT 1847
Query 1823 ATGCCATATTCGCTGCAGTCAAAGGCGGCTGATTCTCGGAGGCTGTCAAGCAGCAAAAAT 1882
|||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||
Sbjct 1848 ATGCCATATTCGCTGCAGTCAAAGGCCGCTGATTCTCGAAGGCTGTCGAGCAGCAGAAAT 1907
Query 1883 GAGCCAGATCTACCAACCAGTTCGCTTCTTGAAAGGTCTCAGTCTCAACCTATAGAACCA 1942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1908 GAGCCAGATCTACCAACCAGTTCGCTTCTTGAAAGGTCTCAGTCTCAACCTATAGAACCA 1967
Query 1943 ATCACTTTACAAGATGGGAATACTTATCCTAGTGACGAAGGTGGCTCATGGGATACAGCT 2002
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1968 ATCACTTTACAAGATGGGAATACATATCCTAGTGACGAAGGTGGCTCCTGGGATACAGCT 2027
Query 2003 GAGAGAACAAATAAAGATAGCAGATACAGGGTATTTGGAAGGTTTAATTCAAGATCACTG 2062
||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||
Sbjct 2028 GAGAGAACAAATAAAGAGAGCAAATGCAGGGTATTTGGAAGGTTTAATTCAAGATCACTG 2087
Query 2063 GTGAGATCACCACCGAGAAATCACAACGAAAACTCTGACTTGATTAGGTATAATGCAAAT 2122
||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 2088 GTGAGATCACCTCCGAGAAATCACGACGAAAACTCTGACTTGATTAGCTATAATGCAAAT 2147
Query 2123 AGAGATTCAAGTCCTACTGAAAGTCGAAAAGGAGGAAGACTGCATTCCGTCGTTCTAAAT 2182
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 2148 AGAGATTCAAGTCCTACTGAAAGCCGAAAAGGAGGAAGACTGCATTCCCTCGTTCTAAAT 2207
Query 2183 AGGGAAAGAAGAGGAAGATTTTCAAACTTTGAGGGTCCTGTTTCGAGTTCTTCTGGTGGA 2242
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2208 AGGGAAAGAAGAGGAAGATTTTCTAACTTTGAGGGTCCTGTTTCGAGTTCTTCTGGTGGA 2267
Query 2243 AATATGACTGCACCAAACAGTCGCCCTTCCAATATGGTCAAGCACAGAGGAAATTATGTG 2302
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||
Sbjct 2268 AATATGACTGCACCAAACAGTCGCCCTTCCAATATGCTCAAGCAGAGAGGAAATCATGTG 2327
Query 2303 CCAGTTGATCAAGGAGTCACTTCTGCTAGCGAAGAAGATATTGTTGTAGACATAATGGGG 2362
||||||||||||||| ||||||| ||||||||||||||||| |||| |||||||||||||
Sbjct 2328 CCAGTTGATCAAGGAATCACTTCAGCTAGCGAAGAAGATATAGTTGCAGACATAATGGGG 2387
Query 2363 CAACACGATCAATTTGTCAGCTCCATGCAGTCTCGTTTGGCTAAGTTACAGGTTGTCCGT 2422
||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct 2388 CAACACGATCAATTTGTCAGCTCTATGCACTCTCGTTTGGCTAAGTTACAGGTCGTCCGT 2447
Query 2423 AGATATTGGGAAAGAAATGATATTAAAAACTCGATAAGTTCAATAGAGAAGATGGCTGAT 2482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2448 AGATATTGGGAAAGAAATGATATTAAAAACTCGATAAGTTCAATAGAGAAGATGGCTGAT 2507
Query 2483 AATGCTGTCGTTGCGGATGTACTACTTATAGTAAACGAGAGACCTGAGATTTTGACACTG 2542
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2508 AATGCTGTAATTGCGGATGTACTACTTATAGTAAACGAGAGACCTGAGATTTTGACACTG 2567
Query 2543 GATACTTGTACCTCTCTTCTTCCCCTTTTGACAACACTTCTAGGGAGCAACATTGATAGT 2602
||||| |||||||||||||| |||||||||||| | ||||||||||||||||| ||||||
Sbjct 2568 GATACCTGTACCTCTCTTCTCCCCCTTTTGACAGCTCTTCTAGGGAGCAACATGGATAGT 2627
Query 2603 CATTTGAGTGTCTGCCTGGAATTGCTGCTTAAGCTGGTAAGAATGTATGGGTCACAAATT 2662
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 2628 CATTTGAGTGTCTGCCTTGATTTGCTGCTTAAGCTGGTAAGAATGTATGGGTCACAAATT 2687
Query 2663 TACTCGTCGCTTTCGGCTCCATCATCTGTTGGTGTGGATATTGAGGCTGAGCAAAGGATG 2722
|||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 2688 TACTCGTCGCTTTCCGCTCCCTCATCTGTTGGTGTAGATATTGAGGCTGAGCAAAGGATG 2747
Query 2723 GAGCGGTACAGTTGTTGCTTTGTCGAACTT-GAGAAAATCAAGGCTTGCCTTCCCTCTTT 2781
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 2748 GAGCGGTACAGTTGTTGCTTTGTCGAG-TTCGAGAAAATCAAGGCTTGCCTTCCCTCTTT 2806
Query 2782 AGCAAGAAGAGGAAATTTGGTGGCCAAGACTCTCCATGAACTCAACTTAACATTTCAAGA 2841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2807 AGCAAGAAGAGGAAATTTGGTGGCCAAGACTCTCCATGAACTCAACTTAACATTTCAAGA 2866
Query 2842 AGTTTCTTCGTGATGCCTCCGTACTTTTTGGATGTGGATTTGGTTCCAATGTGGAGTTTA 2901
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2867 AGTTTCATCGTGAT--------ACTTTTTGGATGTGGATTTGGTTCCAATGTGGAGTTTA 2918
Query 2902 ACAATAGTAAAG--TA-C-C-A--A-GCTAACCAAAAGAGTCTATGGAAGACTAACTAAC 2953
||| || ||||| || | | | | ||||||||| ||||||||||||||||||||||||
Sbjct 2919 ACAGTACTAAAGCCTAACTCTACCAAGCTAACCAATAGAGTCTATGGAAGACTAACTAAC 2978
Query 2954 CCTCGTGTGTTGCGTCTGGCCACTGCTCGGGTCCATTACCTTTGCCTTGCGGAAGCAGAA 3013
||||| || |||||| |||||||||||||||||| | |||||||||||||| | | ||
Sbjct 2979 CCTCGCGTATTGCGTATGGCCACTGCTCGGGTCCGTAACCTTTGCCTTGCGTATG--GA- 3035
Query 3014 TCTCCACGGTACTGTCGCTCGGTTTCAAGCTAACTTGGTGTGTAAAGAGCCATTTTGGCT 3073
| ||||||||||| |||| ||||||||||||||||||||||||||||||||| || |
Sbjct 3036 T----ACGGTACTGTCTCTCG-TTTCAAGCTAACTTGGTGTGTAAAGAGCCATTTCGGTT 3090
Query 3074 GTTGTATTGATCTAGGTTATCATTTCTTCCACACTGTTTAGCTATTTGTTCTTAAGAGCA 3133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3091 GTTGTATTGATCTAGGTTATCATTTCTTCCACACTGTTTAGCTATTTGTTCTTAAGAGCA 3150
Query 3134 CAAAAGAGAAGCCTATGTGTTTAACAAAAACTGTTTTCTAGAAAATTCAGATCTTGAAGT 3193
||||| |||||||||| | || ||||||| ||||||| ||||| ||||||||||||||||
Sbjct 3151 CAAAAAAGAAGCCTATAT-TT-AACAAAA-CTGTTTTGTAGAAGATTCAGATCTTGAAGT 3207
Query 3194 ACTTATACCCAAAATCAGGATTTGTCATTCCCTCT 3228
|||||||||||||||||||||||||||||||||||
Sbjct 3208 ACTTATACCCAAAATCAGGATTTGTCATTCCCTCT 3242
> AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7893671-7900387 REVERSE LENGTH=3351
Length=3351
Score = 2294 bits (1242), Expect = 0.0
Identities = 2154/2583 (83%), Gaps = 107/2583 (4%)
Strand=Plus/Plus
Query 314 AAGGGTTTCGTTTCCGCCATGAACACCAAGCGCGCCTACAAGCTCCAGGAATTTGTGGCA 373
|||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||||||
Sbjct 418 AAGGGTTTCGTTTCCGCCATGACCACCAAGCGAGCCTATAAGCTTCAGGAATTTGTGGCA 477
Query 374 CATTCTGCTGCTGTTAATTGTCTTAAGATTGGGAGGAAGTCCTCCAGGGTTCTCGTTACA 433
|||||||||||||| |||||||||||||| || |||||||| || |||||||| || |||
Sbjct 478 CATTCTGCTGCTGTCAATTGTCTTAAGATCGGAAGGAAGTCTTCTAGGGTTCTGGTAACA 537
Query 434 GGCGGGGAAGATCACAAGGTCAATCTATGGGCTATTGGTAAGCCCAACGCCATCCTGAGC 493
|| || |||||||||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct 538 GGTGGTGAAGATCACAAGGTCAATCTTTGGGCTATTGGTAAGCCCAATGCCATTCTGAGC 597
Query 494 TTGTATGGGCACTCTAGTGGGATTGATTCAGTTACGTTTGATGCTTCGGAATG-CTTAGT 552
|||||||||||||| ||||| ||||||||||| |||||||||||||||| | | ||||||
Sbjct 598 TTGTATGGGCACTCAAGTGGAATTGATTCAGTGACGTTTGATGCTTCGG-AGGTCTTAGT 656
Query 553 AGCAGCAGGAGCTGCTAGTGGTACAATTAAACTTTGGGATCTCGAGGAGGCAAAGGTTGT 612
||||||||||||||||||||||| || |||||||||||| | |||||||||||| ||||
Sbjct 657 TGCAGCAGGAGCTGCTAGTGGTACTATCAAACTTTGGGATTTAGAGGAGGCAAAGATTGT 716
Query 613 CAGAACTCTCACTGGTCACAGGTCGAACTGCGTATCCGTGAATTTTCACCCTTTTGGTGA 672
||| |||||||||||||||||||| || ||| | || ||| |||| ||||||||||||||
Sbjct 717 CAGGACTCTCACTGGTCACAGGTCCAATTGCATCTCAGTGGATTTCCACCCTTTTGGTGA 776
Query 673 GTTTTTTGCTTCTGGTTCTCTAGACACTAATCTCAAGATATGGGATATAAGAAAGAAGGG 732
||||||||| || || || |||||||| ||||| ||||||||||||||| |||| |||||
Sbjct 777 GTTTTTTGCGTCAGGCTCACTAGACACAAATCTTAAGATATGGGATATACGAAAAAAGGG 836
Query 733 ATGCATCCATACTTACAAGGGTCACACTCGAGGGGTCAATGTACTCAGATTTACTCCAGA 792
|||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||
Sbjct 837 CTGCATCCATACTTACAAGGGTCACACGCGAGGAGTCAATGTACTCAGATTCACCCCAGA 896
Query 793 TGGTCGTTGGATTGTATCTGGAGGAGAAGATAATGTTGTCAAGGTTTGGGATTTGACTGC 852
|||||| ||| |||||||||||||||| || || |||| |||||||||||||| || ||
Sbjct 897 TGGTCGCTGGGTTGTATCTGGAGGAGAGGACAACATTGTTAAGGTTTGGGATTTAACAGC 956
Query 853 TGGAAAACTTTTGCA-TGAGTTTAAGAGTCATGAAGGGCAAATTCAGAGTCTAGATTTTC 911
||||||||| || | ||||||||||||||||||||||||||||| || ||||||||||
Sbjct 957 TGGAAAACTGCTG-ACCGAGTTTAAGAGTCATGAAGGGCAAATTCAAAGCCTAGATTTTC 1015
Query 912 ATCCCCATGAATTTCTGCTGGCAACAGGTTCAGCTGATAAG-ACTGTAAAATTCTGGGAC 970
|||| |||||||| || ||||||||||||||||||||| || |||||||||||||||||
Sbjct 1016 ATCCTCATGAATTCCTACTGGCAACAGGTTCAGCTGAT-AGAACTGTAAAATTCTGGGAT 1074
Query 971 CTTGAAACATTCGAGCTTATTGGTTCTGGTGGAACTGAGACTACTGGGGTCCGTTGCCTG 1030
|| |||||||||||||| ||||||||||||||| |||||||| | |||||||||||||||
Sbjct 1075 CTGGAAACATTCGAGCTGATTGGTTCTGGTGGACCTGAGACTGCCGGGGTCCGTTGCCTG 1134
Query 1031 ACCTTT-AATCCAGACGGAAAGAGTGTGCTTTGTGGATTGCAAGAAAGTCTCAAAATTTT 1089
| ||| |||||||| ||||||| |||||||||||||||||||||||||||||| |||||
Sbjct 1135 A-GTTTCAATCCAGATGGAAAGACTGTGCTTTGTGGATTGCAAGAAAGTCTCAAGATTTT 1193
Query 1090 CTCATGGGAGCCAATAAGACGTCATGATGGAGTGGATGTTGGATGGTCAA-ACTTGTCGG 1148
||||||||||||||| ||| |||||||||||||||||||||||||||||| | ||||| |
Sbjct 1194 CTCATGGGAGCCAATTAGATGTCATGATGGAGTGGATGTTGGATGGTCAAGA-TTGTCAG 1252
Query 1149 ATATGAATGTTCACGAGGGAAAGCTTCTCGGTTGCTCATACAATCAAAATTGTGTTGGCG 1208
|||||||||||||||||||||||||||| ||||||||||||||||| | |||||| ||||
Sbjct 1253 ATATGAATGTTCACGAGGGAAAGCTTCTTGGTTGCTCATACAATCAGAGTTGTGTAGGCG 1312
Query 1209 TTTGGGTTGTAGACCTCTCGCGCCCTGAGCCTATG-AGTGGA-GGCGCCACT-C--AGTC 1263
| ||||||||||| |||||||| ||||||| ||| | ||| || | |||| | | ||
Sbjct 1313 TGTGGGTTGTAGATCTCTCGCGTACTGAGCC-ATGTA-TGGCTGGAGACACTGCGCAATC 1370
Query 1264 AAATTCTCATCCAGAGAAAAC-ATCGGGCTCAGGCAGAGATCAA-TCAGGTCTGAACGAT 1321
|||| ||||||||||||| | ||| ||||||| ||||||| | | || ||| || |||
Sbjct 1371 AAATGGTCATCCAGAGAAA-CGATCTTGCTCAGGAAGAGATCCAGT-AGTTCTCAATGAT 1428
Query 1322 AACAGCTCAAAGGTTA-TTCTCGGAAAGTTGTCTGGTTCCCAGAAA-GTGGATCCTTTAT 1379
|| | ||||||| | ||||||| ||| |||| | |||||| ||| || ||||||||||
Sbjct 1429 AATAACTCAAAGAC-AGTTCTCGGGAAGCTGTCCGTTTCCCA-AAATGTAGATCCTTTAT 1486
Query 1380 TGAAGGAAACAAAGTCTCTTGGAAAATTATCAGTTTCTCAAAACTCGGATCCTTTGCCAA 1439
||||||||||||||||||| |||| |||||| |||||||| ||||| ||||||| | |||
Sbjct 1487 TGAAGGAAACAAAGTCTCTAGGAAGATTATCTGTTTCTCAGAACTCTGATCCTTCGACAA 1546
Query 1440 AAGAAACAAAGTCTACTGGAAGGTCATCATCATCTCAAAGTTCAGA-TCCTTTGGTAAAG 1498
||||||||||||| | ||||||||||||| |||| |||| |||||| |||| | | |||
Sbjct 1547 AAGAAACAAAGTCCATTGGAAGGTCATCAACATCACAAAATTCAGAGTCCTC-GATGAAG 1605
Query 1499 GAACCAAAGCCTCTCGGAAGGTTGTCAGTTACTCATCATAGCTCAGACGCAG-TAAAAGA 1557
||| ||||||||||||| |||||||||||| |||| || ||||||| |||| ||
Sbjct 1606 GAATCAAAGCCTCTCGGGAGGTTGTCAGTTTCTCAAAAT---TCAGACGTTTCTAAA-GA 1661
Query 1558 GTCAAG-ACCCCTGTCATCCACAGGAAGTGTATCAGACTCTCCTCACAGGGTTACGTT-G 1615
|||||| || | ||||||||||||||| || ||| | ||||||| ||||| | ||| |
Sbjct 1662 GTCAAGGACGTTT-TCATCCACAGGAAGTTTACCAGGCACTCCTCATAGGGTCA-GTTCG 1719
Query 1616 ACCAGTGCCCCAAAAAGTG-CTTCTGGTATTTCGACAGTTGTCCCCACTGCTGCAGCCTC 1674
|||| || ||||| | |||| ||| |||| |||| ||| | | ||||||| | ||
Sbjct 1720 ACCAATGTATCAAAA-GCCACTTCGGGTGTTTCAACAGCCGTCTCTAATGCTGCAACGTC 1778
Query 1675 AAAGAGAAATTTTGGAAAAGCTAACCCAAAGGCGAATCCTCCAGTAGTCAATAAAG-A-- 1731
|| ||| |||||| ||||||||||||||||||||||||| || |||||| | |
Sbjct 1779 AAGGAGGAATTTTACAAAAGCTAACCCAAAGGCGAATCCT---GT---CAATAAGGCAGC 1832
Query 1732 AGATTATTT-TCCAGTAATTGTCCCCAGAACGGAGCCAATAATTGAGCAGGC-ATCTGAA 1789
||||| || ||| || |||||||||||| | || || | ||| |||||||| | |||||
Sbjct 1833 AGATT-TTGCTCCGGTGATTGTCCCCAGAGCAGACCCTAGAATAGAGCAGGCTA-CTGAA 1890
Query 1790 TTCAGAGCAGAACTTGACATTATTGGAAGAACTATGCCATATTCGCTGCAGTCAAAGGCG 1849
| |||||||||||||||||| |||| |||||| ||||| ||||| ||||| | ||
Sbjct 1891 TCCAGAGCAGAACTTGACATAATTGCAAGAACCATGCCGTATTCATTGCAG-----G-CG 1944
Query 1850 GCTGATTCTCGGAGGCTGTCA-AGCAGCAAAAATGAGCCAGATCTACCA-AC-CAGTTCG 1906
|||||||| || ||| | | ||||||| |||| | || ||||| ||| || | ||||
Sbjct 1945 GCTGATTCCCGAAGG-TCACCTAGCAGCAGAAATAACCCTGATCTGCCAGACGC--TTCG 2001
Query 1907 CTTCTTGAAAGGTCTCAGTCTCAACCTA-TAGAACCAA-TCACTTTACAAGATGGGAATA 1964
||||||||| |||| ||||||| || | | ||||||| | | | ||| ||||||| ||
Sbjct 2002 GTTCTTGAAATGTCTGAGTCTCAGCC-AGTTGAACCAAATAA-TATACCAGATGGGGGTA 2059
Query 1965 CT-TATCCTAGTGACGAA-GGT-GGC-T-CATGGGATACAGCTGAGAGAA-CAAATAAAG 2018
| | |||| ||| ||| ||| ||| | | ||| | || ||||| ||| || ||| |
Sbjct 2060 CACT-TCCTGGTG--GAAAGGTTGGCATGCG-GGG-TGCAACTGAGCGAAGCAT-TAATG 2113
Query 2019 ATAGCAGATACAGG-GTATTTGGAAGGTTTAATTCAAGATCACTGG-TGAGATCACCACC 2076
|| ||||||| | | || ||| ||| ||||||||| |||| || || | ||||| ||
Sbjct 2114 ATTTTAGATACAAGAG-ATATGGCAGGAGTAATTCAAGGTCAC-GGATGGGGTCACCTCC 2171
Query 2077 GA-GAAATCACAACGAAAACTCTGACTTGATTAGGTATA-ATGCAAATAGAGATTCAAGT 2134
| |||| ||| | ||||||| ||||||| | || | | || |||||||||| ||||
Sbjct 2172 -ACGAAACCACGATGAAAACTATGACTTGGTAAGCCACAGAT-CAAATAGAGACCCAAGC 2229
Query 2135 CCTACTGAAAGTC-GAAAAGGAGGAAGACTGCATTC-CGTCGTTC-TAAATAGGGAAAGA 2191
|| |||||||||| |||| ||||||||| | || || | |||| | |||||||||| ||
Sbjct 2230 CCCACTGAAAGTCAGAAA-GGAGGAAGATTCCAGTCAC-TCGT-CATAAATAGGGAGAGG 2286
Query 2192 AGAGGAAGATTTTCAAACTTTGAGGGTCCTGTTTCGAGTTCTTCTGGTGGAAATATGACT 2251
|||||||||||||||||||| |||||||||||||| | || ||| ||||||||||| ||
Sbjct 2287 AGAGGAAGATTTTCAAACTTCGAGGGTCCTGTTTCAAATTTTTCAAGTGGAAATATGCCT 2346
Query 2252 GCACCAAACAGTC-GCCCTTCCAATATGGTCAAGCACAGAGGAAATTATGTGCCAGTTGA 2310
|| ||||||| || ||||||| |||||| ||||||| ||||| || || ||||||||||
Sbjct 2347 GCTCCAAACA-TCCGCCCTTCAAATATGTTCAAGCAGAGAGGGAACCATATGCCAGTTGA 2405
Query 2311 TCAAGG-AGTC-ACTTCTGCTAGC-GAAGAAGATATTGTTGTAGACATAATGGGGCAA-C 2366
||||| | || | |||| || | |||||| ||||||||| |||||||||||| || |
Sbjct 2406 ACAAGGGA-TCGA-TTCTCCTT-CTGAAGAAAATATTGTTGAAGACATAATGGGA-AAGC 2461
Query 2367 ACGATCAATTTGTCAGCTCCATGCAGTCTCGTTTGGCTAAGTTACAGGTTGTCCGTAGAT 2426
|| |||||||||||||||| ||||||||||||||||||||||||||||| || |||||||
Sbjct 2462 ACAATCAATTTGTCAGCTCTATGCAGTCTCGTTTGGCTAAGTTACAGGTAGTTCGTAGAT 2521
Query 2427 ATTGGGAAAGAAATGATATTAAAAACTCGATAAGTTCAATAGAGAAGATGGCTGATAATG 2486
|||||||||| |||||| | ||||| |||||| | || ||||||||||||||||||||||
Sbjct 2522 ATTGGGAAAGGAATGATGTAAAAAATTCGATAGGCTCGATAGAGAAGATGGCTGATAATG 2581
Query 2487 CTGTCGTTGCGGATGTACTACTTATAGTAAACGAGAGACCTGAGATTTTGACACTGGATA 2546
|||| |||||| ||||| |||| ||| ||||||| ||||||||||||||||||||
Sbjct 2582 CTGTTACTGCGGACGTACTGGGTATAATAACCGAGAGAAATGAGATTTTGACACTGGATA 2641
Query 2547 CTTGTACCTCTCTTCTTCCCCTTTTGACAACACTTCTAGGGAGCAACATTGAT-AGTCAT 2605
||||||||| |||||||||||| | ||| | ||| |||||||| ||| ||| || |||
Sbjct 2642 ATTGTACCTCCCTTCTTCCCCTTCTAACAGCTCTTTTAGGGAGCGGCATGGATCAG-CAT 2700
Query 2606 TTGAGTGTCTGCCTGGAATTGCTGCTTAAGCTGGTAAGAATGTATGGGTCACAAATTTAC 2665
||||| || | |||||| |||||||| ||||| || ||| |||||||||||| |||||||
Sbjct 2701 TTGAGCGTTTCCCTGGATTTGCTGCTGAAGCTTGTCAGACTGTATGGGTCACCAATTTAC 2760
Query 2666 TCGTCGCTTTCGGCTCCATCATCTGTTGGTGTGGATATTGAGGCTGAGCAAAGGATGGAG 2725
|| || || || |||||| ||||||||||||| ||||| ||||||||||||||||| |||
Sbjct 2761 TCATCACTGTCAGCTCCAGCATCTGTTGGTGTAGATATCGAGGCTGAGCAAAGGATCGAG 2820
Query 2726 CGGTACAGTTGTTGCTTTGTCGAACTTGAGAAAATCAAGGCTTGCCTTCCCTCTTTAGCA 2785
|| ||||| |||||||||| || || |||||| |||| || |||||||||||| |||||
Sbjct 2821 CGCTACAGCCGTTGCTTTGTAGAGCTAGAGAAAGTCAAAGCATGCCTTCCCTCTCTAGCA 2880
Query 2786 AGAAGAGGAAATTTGGTGGCCAAGACTCTCCAT-GAACTCAACTTAACATTTCAAGAAGT 2844
||||||||| ||||||||||||| || | | | ||||||||| || ||||||| |||||
Sbjct 2881 AGAAGAGGAGGTTTGGTGGCCAAGTCTGTGC-TCGAACTCAACCTAGCATTTCAGGAAGT 2939
Query 2845 TTC 2847
|||
Sbjct 2940 TTC 2942
> AT5G08400.1 | Symbols: | Protein of unknown function (DUF3531)
| chr5:2706458-2708939 REVERSE LENGTH=1797
Length=1797
Score = 558 bits (302), Expect = 1e-157
Identities = 406/451 (90%), Gaps = 27/451 (6%)
Strand=Plus/Minus
Query 2786 AGAAGAGGAAATTTGGTGGCCAAGACTCTCCATGAACTCAACTTAACATTTCAAGAAGTT 2845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1413 AGAAGAGGAAATTTGGTGGCCAAGACTCTCCATGAACTCAACTTAACATTTCAAGAAGTT 1354
Query 2846 TCTTCGTGATGCCTCCGTACTTTTTGGATGTGGATTTGGTTCCAATGTGGAGTTTAACA- 2904
|| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1353 TCATCGTGA--------TACTTTTTGGATGTGGATTTGGTTCCAATGTGGAGTTTAACAG 1302
Query 2905 -A-T--AG--TAA-AGTACCAAGCTAACCAAAAGAGTCTATGGAAGACTAACTAACCCTC 2957
| | || ||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1301 TACTAAAGCCTAACTCTACCAAGCTAACCAATAGAGTCTATGGAAGACTAACTAACCCTC 1242
Query 2958 GTGTGTTGCGTCTGGCCACTGCTCGGGTCCATTACCTTTGCCTTGCGGAAGCAGAATCTC 3017
| || |||||| |||||||||||||||||| | |||||||||||||| | | | | |
Sbjct 1241 GCGTATTGCGTATGGCCACTGCTCGGGTCCGTAACCTTTGCCTTGCGTATG--G-A--T- 1188
Query 3018 CACGGTACTGTCGCTCGGTTTCAAGCTAACTTGGTGTGTAAAGAGCCATTTTGGCTGTTG 3077
||||||||||| ||| |||||||||||||||||||||||||||||||||| || |||||
Sbjct 1187 -ACGGTACTGTCTCTC-GTTTCAAGCTAACTTGGTGTGTAAAGAGCCATTTCGGTTGTTG 1130
Query 3078 TATTGATCTAGGTTATCATTTCTTCCACACTGTTTAGCTATTTGTTCTTAAGAGCACAAA 3137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1129 TATTGATCTAGGTTATCATTTCTTCCACACTGTTTAGCTATTTGTTCTTAAGAGCACAAA 1070
Query 3138 AGAGAAGCCTATGTGTTTAACAAAAACTGTTTTCTAGAAAATTCAGATCTTGAAGTACTT 3197
| ||||||||| | |||||| ||||||||||| ||||| ||||||||||||||||||||
Sbjct 1069 AAAGAAGCCTA--TATTTAAC-AAAACTGTTTTGTAGAAGATTCAGATCTTGAAGTACTT 1013
Query 3198 ATACCCAAAATCAGGATTTGTCATTCCCTCT 3228
|||||||||||||||||||||||||||||||
Sbjct 1012 ATACCCAAAATCAGGATTTGTCATTCCCTCT 982
Score = 182 bits (98), Expect = 2e-44
Identities = 110/116 (95%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 2608 GAGTGTCTGCCTGGAATTGCTGCTTAAGCTGGTAAGAATGTATGGGTCACAAATTTACTC 2667
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1797 GAGTGTCTGCCTTGATTTGCTGCTTAAGCTGGTAAGAATGTATGGGTCACAAATTTACTC 1738
Query 2668 GTCGCTTTCGGCTCCATCATCTGTTGGTGTGGATATTGAGGCTGAGCAAAGGATGG 2723
||||||||| ||||| |||||||||||||| ||||||||||||||||||||| |||
Sbjct 1737 GTCGCTTTCCGCTCCCTCATCTGTTGGTGTAGATATTGAGGCTGAGCAAAGGTTGG 1682
Score = 115 bits (62), Expect = 3e-24
Identities = 69/72 (96%), Gaps = 2/72 (3%)
Strand=Plus/Minus
Query 2717 AGGATGGAGCGGTACAGTTGTTGCTTTGTCGAACTT-GAGAAAATCAAGGCTTGCCTTCC 2775
||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||
Sbjct 1598 AGGATGGAGCGGTACAGTTGTTGCTTTGTCG-AGTTCGAGAAAATCAAGGCTTGCCTTCC 1540
Query 2776 CTCTTTAGCAAG 2787
||||||||||||
Sbjct 1539 CTCTTTAGCAAG 1528
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 160584384543
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5