BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487699
Length=1781
Score E
Sequences producing significant alignments: (Bits) Value
AT5G08570.1 | Symbols: | Pyruvate kinase family protein | chr5... 2872 0.0
AT5G63680.1 | Symbols: | Pyruvate kinase family protein | chr5... 1609 0.0
> AT5G08570.1 | Symbols: | Pyruvate kinase family protein | chr5:2778000-2780441
FORWARD LENGTH=1819
Length=1819
Score = 2872 bits (1555), Expect = 0.0
Identities = 1716/1790 (96%), Gaps = 25/1790 (1%)
Strand=Plus/Plus
Query 1 TTTACTCCAAAACCCAGAGT-CAT-ACACAAGTCCAAGCCAAAAAACAAGGGTTCTTGCT 58
|||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||
Sbjct 29 TTTACTCCAAAACCCAGAGTCCATCACACAAGTCCAAGCCCGAAAACAAGGGTTCTTGCT 88
Query 59 CCGACACGACAACAAATCCAGATTCTGAGCTTTTTAGAAGAGAAA-TT--GTA-GAG--A 112
|||||||||||||||||||||||| ||||| |||| | |||| || | | ||| |
Sbjct 89 CCGACACGACAACAAATCCAGATTTTGAGC---TTAG--G-GAAACTTGAGAAGGAGAAA 142
Query 113 AAAATGTCGAACATAGACATAGAAGGGATATTGAAGGAGCTACCTAATGATGGCAGGATC 172
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 143 AAAATGTCGAACATAGACATAGAAGGGATCTTGAAGGAGCTACCTAATGATGGGAGGATC 202
Query 173 CCAAAGACGAAGATAGTTTGCACTTTAGGACCAGCTTCTCGGACTGTTTCCATGATCGAA 232
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 203 CCAAAGACGAAGATAGTTTGCACATTAGGACCAGCTTCTCGCACTGTTTCCATGATCGAA 262
Query 233 AAGCTTTTGAAAGCCGGTATGAATGTCGCTCGCTTCAACTTCTCACATGGAAGCCATGAA 292
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 263 AAGCTTTTGAAAGCCGGTATGAATGTGGCTCGCTTCAACTTCTCACATGGAAGCCATGAA 322
Query 293 TACCATCAAGAGACACTCGACAACCTCCGCACCGCTATGCATAATACCGGCATTCTCGCT 352
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 323 TACCATCAAGAGACACTCGACAACCTCCGCTCTGCTATGCATAATACCGGCATTCTCGCT 382
Query 353 GCTGTCATGCTTGATACTAAGGGACCTGAGATTCGTACTGGTTTCTTGAAAGATGGGAAC 412
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 383 GCTGTCATGCTTGATACTAAGGGGCCTGAGATTCGTACTGGTTTCTTGAAAGATGGGAAC 442
Query 413 CCTATACAACTGAAGGAAGGTCAAGAGATTACTATAACCACTGATTATGACATT-AAGGG 471
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 443 CCTATACAACTGAAGGAAGGTCAAGAGATTACTATAACCACTGATTATGACATTCAA-GG 501
Query 472 AGACGAGTCAACGATATCCATGAGCTATAAAAAGCTGCCTTTGGATGTGAAGCCCGGAAA 531
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 502 AGACGAATCAACGATATCCATGAGCTATAAAAAGCTGCCTTTGGATGTGAAGCCCGGAAA 561
Query 532 CACCATACTCTGTGCAGATGGAAGCATAAGTCTAGCTGTCTTGTCATGTGATCCTGAGTC 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 562 CACCATACTCTGTGCAGATGGAAGCATAAGTCTAGCTGTCTTGTCATGTGATCCTGAGTC 621
Query 592 TGGAACGGTTAGGTGCCGGTGTGAAAACTCGGCGATGCTTGGTGAAAGAAAGAATGTGAA 651
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 622 TGGAACTGTTAGGTGCCGGTGTGAAAACTCGGCGATGCTTGGTGAAAGAAAGAATGTGAA 681
Query 652 TCTTCCTGGCGTTGTTGTTGATCTTCCCACTTTGACAGATAAGGATATTGAAGATATTCT 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 682 TCTTCCTGGCGTTGTTGTTGATCTTCCCACTTTGACAGATAAGGATATTGAAGATATTCT 741
Query 712 CGGTTGGGGTGTTCCGAACAGCATCGATATGATTGCTCTTTCGTTTGTCCGTAAAGGTTC 771
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 742 CGGTTGGGGTGTTCCGAACAGCATTGATATGATTGCTCTTTCGTTTGTCCGTAAAGGTTC 801
Query 772 GGATCTTGTTAATGTCCGGAAGGTTCTTGGATCTCATGCTAAAAGCATAATGCTGATGTC 831
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 802 GGATCTTGTTAATGTCCGCAAGGTTCTTGGATCTCATGCTAAAAGCATAATGCTCATGTC 861
Query 832 AAAGGTTGAGAACCAGGAAGGAGTGATTAACTTTGATGAGATCTTGCGTGAAACAGATGC 891
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 862 AAAGGTTGAGAACCAGGAAGGTGTGATTAACTTTGATGAGATCTTGCGTGAAACAGATGC 921
Query 892 GTTCATGGTTGCCCGTGGTGATCTCGGGATGGAGATTCCAATAGAGAAGATCTTCTTGGC 951
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 922 GTTCATGGTTGCCCGTGGTGATCTCGGGATGGAGATTCCGATAGAGAAGATCTTCTTGGC 981
Query 952 GCAAAAGTTGATGATCTACAAGTGTAACCTTGCTGGTAAACCGGTGGTCACAGCTACTCA 1011
|||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 982 TCAAAAGTTGATGATCTACAAGTGTAACCTTGCGGGTAAACCGGTGGTCACAGCCACTCA 1041
Query 1012 GATGCTGGAGTCAATGATCAAATCACCTCGGCCAACCCGAGCTGAAGCCACAGATGTTGC 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1042 GATGCTGGAGTCAATGATCAAATCACCTCGGCCAACCCGAGCTGAAGCCACAGATGTTGC 1101
Query 1072 AAATGCTGTTCTTGATGGCACTGACTGTGTGATGCTTAGCGGTGAGAGTGCAGCAGGAGC 1131
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1102 AAATGCTGTTCTTGATGGTACTGACTGTGTGATGCTTAGCGGTGAGAGTGCAGCAGGAGC 1161
Query 1132 TTATCCTGAAATAGCTGTGAAAGTCATGGCAAAGATCTGCATTGAAGCCGAATCCTCGCT 1191
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1162 TTATCCGGAAATAGCTGTGAAAGTCATGGCTAAGATCTGCATTGAAGCCGAATCCTCGCT 1221
Query 1192 TGATTATAACACAATCTTCAAAGAGATGATCCGAGCAACTCCGCTTCCAATGAGCCCACT 1251
|||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1222 TGATTACAACACAATCTTTAAAGAGATGATCCGAGCAACTCCACTTCCAATGAGCCCACT 1281
Query 1252 CGAGAGTCTTGCGTCATCCGCTGTACGGACTGCTAACAAAGCGAGGGCGAAACTCATCAT 1311
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1282 CGAGAGTCTTGCATCATCCGCTGTACGGACTGCTAACAAAGCGAGGGCAAAACTCATCAT 1341
Query 1312 TGTGTTGACACGTGGAGGTTCAACCGCTAACCTTGTGGCTAAATACAGACCGGCTGTTCC 1371
|||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct 1342 TGTGTTGACACGTGGAGGTTCAACTGCTAATCTCGTGGCTAAATACAGACCGGCTGTTCC 1401
Query 1372 GATTCTGTCAGTGGTTGTCCCGGTCATGACCACTGATTCCTTTGACTGGGCTTGTAGTGA 1431
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 1402 GATTCTGTCAGTGGTTGTCCCGGTTATGACCACTGATTCCTTTGACTGGTCTTGTAGTGA 1461
Query 1432 CGAGTCACCTGCAAGGCATAGTCTGATATACAGAGGTCTAATCCCTATGTTGGCTGAAGG 1491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1462 CGAGTCACCTGCAAGGCATAGTCTGATATACAGAGGTCTAATCCCTATGTTGGCTGAAGG 1521
Query 1492 ATCTGCAAAGGCAACAGACAGTGAAGCCACGGAAGTTATCATTGAAGCTGCTCTGAAGTC 1551
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1522 ATCTGCAAAGGCAACAGATAGTGAAGCCACCGAAGTTATCATTGAAGCTGCTCTGAAGTC 1581
Query 1552 GGCTACACAAAGAGGACTGTGCAACCATGGTGATGCAGTCGTGGCACTACACCGTATTGG 1611
|||||| || |||||||||||||||| |||||||||| ||||||| || |||||||||||
Sbjct 1582 GGCTACTCAGAGAGGACTGTGCAACCGTGGTGATGCAATCGTGGCGCTGCACCGTATTGG 1641
Query 1612 AGCTGCCTCAGTTATTAAGATCTGTGTGGTAAAGTGAGATTTCAGACTTCTTTCAATACC 1671
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 1642 AGCTGCCTCAGTTATTAAGATCTGTGTGGTTAAGTGAGATTACAGACTTCTTTCAATACC 1701
Query 1672 TCAAATCTTGGCTCCTGATGATTGTTGGTAATCGTAACTGAGAGTTTGCTTTGTAGTATG 1731
||||||||||| || | |||||||||||||||||||| |||||||||||| |||
Sbjct 1702 TCAAATCTTGG------AT--T-GTTGGTAATCGTAACTGAGATTTTGCTTTGTAGCATG 1752
Query 1732 AAATAATGAAAACAGGTCACAATAGTTCCTGGAACTCTGTTACTTTTAAG 1781
|||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1753 AAATAAAGAAAACAGGTCACAATAGTTCCTGAAACTCTGTTACTTTTAAG 1802
> AT5G63680.1 | Symbols: | Pyruvate kinase family protein | chr5:25490073-25492752
FORWARD LENGTH=1880
Length=1880
Score = 1609 bits (871), Expect = 0.0
Identities = 1326/1548 (86%), Gaps = 22/1548 (1%)
Strand=Plus/Plus
Query 112 AAAAATGTCGAACATAGACATAGAAGGGATATTGAAGGAGCTACCTAATGATGGCAGGAT 171
||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 122 AAAAATGTCGAACATAGACATAGAAGGAATATTGAAGGAGCTACCTAATGATGGGAGGA- 180
Query 172 C-CCAAAGACGAAGATAGTTTGCACTTTAGGACCAGCTTCTCGGACTGTTTCCATGATCG 230
| || ||||| ||||| ||||| || ||||| || || ||| || |||| | ||||| |
Sbjct 181 CTCCTAAGACTAAGATCGTTTGTACATTAGGTCCTGCGTCTAGGTCTGTGACAATGATTG 240
Query 231 AAAAGCTT-TTGAAAGCCGGTATGAATGTCGCTCGCTTCAACTTCTCACATGGAAGCCAT 289
| |||||| || ||||| || |||||||| ||||| ||||| ||||| || |||||||||
Sbjct 241 AGAAGCTTCTT-AAAGCAGGCATGAATGTAGCTCGATTCAATTTCTCTCACGGAAGCCAT 299
Query 290 GAATACCATCAAGAGACACTCGACAACCTCCGCACCGCTATGCATAATACCGGCATTCTC 349
|| |||||||| ||||| || ||||| ||||||||||||||||| |||||||||||||||
Sbjct 300 GAGTACCATCAGGAGACTCTTGACAATCTCCGCACCGCTATGCAGAATACCGGCATTCTC 359
Query 350 GCTGCTGTCATGCTTGATACTAAGGGACCTGAGATTCGTACTGGTTTCTTGAAAGATGGG 409
|||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct 360 GCTGCTGTTATGCTTGATACAAAGGGGCCTGAGATTCGTACCGGTTTCTTGAAAGATGGG 419
Query 410 AACCCTATACAACTGAAGGAAGGTCAAGAGATTACTATAACCACTGATTATGACATTAAG 469
|||||||||||||| |||||||| |||||||| || || ||||||||||||||||| |||
Sbjct 420 AACCCTATACAACTAAAGGAAGGCCAAGAGATCACAATTACCACTGATTATGACATCAAG 479
Query 470 GGAGACGAGTCAACGATATCCATGAGCTATAAAAAGCTGCCTTTGGATGTGAAGCCCGGA 529
|| || ||| |||||| ||||||||||| |||||||| || |||||||||||||||||
Sbjct 480 GGCGATGAGAAAACGATTTCCATGAGCTACAAAAAGCTCCCAGTGGATGTGAAGCCCGGA 539
Query 530 AACACCATACTCTGTGCAGATGGAAGCATAAGTCTAGCTGTCTTGTCATGTGATCCTGA- 588
|| |||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |
Sbjct 540 AATACCATACTATGTGCAGATGGAAGCATAAGTCTTGCTGTCGTGTCATGTGATCCAAAC 599
Query 589 GTCTGGAACGGTTAGGTGCCGGTGTGAAAACT-CGGCGATGCTTGGTGAAAGAAAGAATG 647
| |||| || |||| || || |||||||| | | || ||||| ||||||||||| ||||
Sbjct 600 G-CTGGGACTGTTATATGTCGATGTGAAAA-TACAGCCATGCTAGGTGAAAGAAAAAATG 657
Query 648 TGAATCTTCCTGGCGTTGTTGTTGATCTTCCCACTTTGACAGATAAGGATATTGAAGATA 707
||||||| || || |||||||||||||| ||||| ||||| || |||||| | |||||||
Sbjct 658 TGAATCTCCCAGGTGTTGTTGTTGATCTCCCCACATTGACTGACAAGGATGTAGAAGATA 717
Query 708 TTCTCGGTTGGGGTGTTCCGAACAGCATCGATATGATTGCTCTTTCGTTTGTCCGTAAAG 767
|||| ||||||||||| |||| ||||||||||||||||||||| ||||| || ||||
Sbjct 718 TTCTTAAATGGGGTGTTCCAAACAACATCGATATGATTGCTCTTTCATTTGTTCGCAAAG 777
Query 768 GTTCGGATCTTGTTAATGTCCGGAAGGTTCTTGGATCTCATGCTAAAAGCATAATGCTGA 827
|||| |||||||||||||||||||| || |||||||| ||| | || || |||||| |||
Sbjct 778 GTTCAGATCTTGTTAATGTCCGGAAAGTCCTTGGATCACATTCCAAGAGTATAATGTTGA 837
Query 828 TGTCAAAGGTTGAGAACCAGGAAGGAGTGATTAACTTT-GATGAGATCTTGCGTGAAACA 886
|||| |||||||||||||| |||||||| | || ||| |||||||| |||||||||||
Sbjct 838 TGTCGAAGGTTGAGAACCAAGAAGGAGTCCTGAA-TTTCGATGAGATTTTGCGTGAAACT 896
Query 887 GATGCGTTCATGGTTGCCCGTGGTGATCTCGGGATGGAGATTCCAATAGAGAAGATCTTC 946
||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct 897 GATGCATTCATGGTTGCTCGTGGTGATCTTGGGATGGAGATTCCGATAGAGAAGATCTTC 956
Query 947 TTGGCGCAAAAGTTGATGATCTACAAGTGTAACCTTGCTGGTAAACCGGTGGTCACAGCT 1006
||||| || ||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 957 TTGGCTCAGAAGATGATGATCTACAAGTGTAACCTTGCAGGTAAACCGGTGGTCACAGCC 1016
Query 1007 ACTCAGATGCTGGAGTCAATGATCAAATCACCTCGGCCAACCCGAGCTGAAGCCACAGAT 1066
||||| ||||| ||||| |||||||||||||| |||||||| ||||| ||||||||||||
Sbjct 1017 ACTCAAATGCTCGAGTCGATGATCAAATCACCACGGCCAACACGAGCAGAAGCCACAGAT 1076
Query 1067 GTTGCAAATGCTGTTCTTGATGGCACTGACTGTGTGATGCTTAGCGGTGAGAGTGCAGCA 1126
|| ||||| || ||||| ||||||||||||||||||||||||||||| || ||||| |||
Sbjct 1077 GTAGCAAACGCAGTTCTCGATGGCACTGACTGTGTGATGCTTAGCGGAGAAAGTGCTGCA 1136
Query 1127 GGAGCTTATCCTGAAATAGCTGTGAAAGTCA-TGGC-AAAGATCTGCATTGAAGCCGAAT 1184
|||||||| ||||||||||| |||||| || |||| ||| |||||||| || || ||||
Sbjct 1137 GGAGCTTACCCTGAAATAGCAGTGAAAA-CAATGGCTAAA-ATCTGCATCGAGGCGGAAT 1194
Query 1185 CCTCGCTTGATTATAACACAATCTTCAAAGAGATGATCCGAGCAACTCCGCTTCCAATGA 1244
| |||||||| || |||||||||||||| |||||||| |||||||||| ||||||||||
Sbjct 1195 CATCGCTTGACTACAACACAATCTTCAAGGAGATGATTAGAGCAACTCCACTTCCAATGA 1254
Query 1245 GCCCACTCGAGAGTCTTGCGTCATCCGCTGTACGGACTGCTAACAAAGCGAGGGCGAAAC 1304
|| | || ||||||||||| ||||| |||||||| || || |||||||| | || ||||
Sbjct 1255 GCACTCTTGAGAGTCTTGCATCATCAGCTGTACGAACGGCAAACAAAGCCAAAGCCAAAC 1314
Query 1305 TCATCATTGTGTTGAC-ACGTGGAGGTTCAACCGCTAACCTTGTGGCTAAATACAGACCG 1363
||||||| |||||||| | | |||||| |||| ||||| || ||||| || || ||||||
Sbjct 1315 TCATCATCGTGTTGACCA-GAGGAGGTACAACAGCTAAACTGGTGGCCAAGTATAGACCG 1373
Query 1364 GCTGTTCCGATTCTGTCAGTGGTTGTCCCGGTCATGACCA-CTGATTCCTTTGACTGG-G 1421
|||||||| ||||| || |||||||| |||||| | |||| | ||| | ||| ||||| |
Sbjct 1374 GCTGTTCCAATTCTATCGGTGGTTGTTCCGGTCTTCACCAGC-GATACGTTTAACTGGAG 1432
Query 1422 CTTGTAGTGACGAGTCACCTGCAAGGCATAGTCTGATATACAGAGGTCTAATCCCTATGT 1481
||| || || |||||||| || ||||||||| ||||||| |||||||| || || | |
Sbjct 1433 -TTGCAGCGATGAGTCACCGGCGAGGCATAGTTTGATATATAGAGGTCTGATACCGGTTT 1491
Query 1482 TGGCTGAAGGATCTGCAAAGGCAACAGACAGTGAAGCCACGGAAGTTATCATTGAAGCTG 1541
||| ||||||||||||||| ||||| || |||||| |||| || | || |||||| |||
Sbjct 1492 TGGGTGAAGGATCTGCAAAAGCAACTGATAGTGAATCCACAGAGGAGATTATTGAATCTG 1551
Query 1542 CTCTGAAGTCGGCTACACA-AAGAGGACTGTGCAACCATGGTGATGCAGTCGTGGCACTA 1600
|| ||||||| || ||| | || ||||||||| |||||||||||||| || ||||| ||
Sbjct 1552 CTTTGAAGTCAGCGACAGAGAA-AGGACTGTGTAACCATGGTGATGCTGTGGTGGCTCTG 1610
Query 1601 CACCGTATTGGAGCTGCCTCAGTTATTAAGATCTGTGTGGTAAAGTGA 1648
||||||||||||||||| || ||||| |||||||||||||| ||||||
Sbjct 1611 CACCGTATTGGAGCTGCTTCGGTTATCAAGATCTGTGTGGTGAAGTGA 1658
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88101956475
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5