BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487710
Length=2015
Score E
Sequences producing significant alignments: (Bits) Value
AT5G08680.1 | Symbols: | ATP synthase alpha/beta family protei... 3216 0.0
AT5G08670.1 | Symbols: | ATP synthase alpha/beta family protei... 2431 0.0
AT5G08690.1 | Symbols: | ATP synthase alpha/beta family protei... 2350 0.0
> AT5G08680.1 | Symbols: | ATP synthase alpha/beta family protein
| chr5:2821928-2824966 FORWARD LENGTH=2027
Length=2027
Score = 3216 bits (1741), Expect = 0.0
Identities = 1913/1994 (96%), Gaps = 20/1994 (1%)
Strand=Plus/Plus
Query 29 TTTCTCTGTTT---CACAGTCATGGCGAGTCGGCGAATCTTATCATCGCTTCTCCGTTCT 85
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 44 TTTCTCTGTTTCACCACAGTCATGGCGAGTCGGCGAATCTTATCATCGCTTCTCCGTTCT 103
Query 86 TCTTCCG-GCAGATCTACTTCTAAATCCTCCTTGATCGGTAGCCGAAACCCGAGGCTTTC 144
|||| || | ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 104 TCTT-CGAGTAGATCTACTTCTAAATCCTCCTTGATCGGGAGCCGAAACCCGAGGCTTTT 162
Query 145 ATCACCAGGTCCCGCTCATCGAGCTGCGCCTTGTGGGACTCTCCTTGGCCGAGTCGCTGA 204
||| || |||||||| ||| |||| || || |||||||||||||||||||||||||| ||
Sbjct 163 ATCCCCCGGTCCCGCGCATGGAGCCGCTCCATGTGGGACTCTCCTTGGCCGAGTCGCCGA 222
Query 205 GTATTCGACATCTTCTCCGGCTAATTCGGCTGCGCCATCGTCTGCTCCTGCTAAGGATGA 264
||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||
Sbjct 223 GTATTCGACTTCTTCTCCGGCTAATTCGGCTGCACCATCTTCTGCTCCTGCTAAAGATGA 282
Query 265 GGGGAAGAAGATCTATGATTACGGTGGCAAAGGCGCGATCGGGCGTGTGTGTCAGGTTAT 324
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 283 GGGAAAGAAGACCTATGATTACGGTGGCAAAGGCGCGATCGGGCGTGTGTGTCAGGTTAT 342
Query 325 TGGTGCCATTGTTGATGTGAGATTCGAAGATCAGGAGGGATTGCCTCCGATCATGACATC 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 343 TGGTGCCATTGTTGATGTGAGATTCGAAGATCAGGAGGGATTGCCTCCGATCATGACATC 402
Query 385 TCTCGAGGTCCAGGATCATCCCACAAGGCTGGTACTTGAGGTGTCTCATCACTTGGGTCA 444
||||||||| ||||||||||| |||||| |||| ||||||||||||||||||||||||||
Sbjct 403 TCTCGAGGTACAGGATCATCCAACAAGGTTGGTCCTTGAGGTGTCTCATCACTTGGGTCA 462
Query 445 AAATGTCGTCAGGACCATTGCTATGGATGGTACTGAGGGTCTCGTCCGTGGAAGGAAAGT 504
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 463 AAATGTCGTTAGGACCATTGCTATGGATGGTACTGAGGGTCTCGTCCGTGGAAGGAAGGT 522
Query 505 TCTCAATACTGGCGCTCCAATCACTGTTCCTGTTGGAAGGGCCACCCTTGGACGTATCAT 564
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 523 TCTCAACACTGGTGCTCCAATCACTGTTCCTGTTGGAAGGGCCACCCTTGGACGTATCAT 582
Query 565 GAATGTTCTTGGCGAACCCATTGACGAGAGAGGCGAAATTAAGACCGAGCATTACTTACC 624
||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 583 GAACGTTCTTGGAGAACCTATTGACGAGAGAGGCGAAATTAAGACCGAGCATTACTTACC 642
Query 625 CATTCACAGAGACGCTCCAGCTTTGGTTGATTTGGCCACCGGTCAAGAGATTCTGGCTAC 684
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 643 CATTCACAGAGACGCTCCAGCTTTGGTTGATTTGGCCACCGGTCAAGAGATTCTCGCTAC 702
Query 685 TGGTATTAAGGTTGTTGATCTCCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGGCTTTT 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 703 TGGTATTAAGGTTGTTGATCTCCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGGCTTTT 762
Query 745 TGGCGGTGCTGGCGTTGGGAAAACAGTGCTCATTATGGAACTGATCAACAATGTTGCCAA 804
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 763 TGGCGGTGCTGGTGTTGGGAAAACAGTGCTCATTATGGAACTGATTAACAATGTTGCCAA 822
Query 805 AGCTCATGGTGGTTTCTCCGTGTTTGCTGGTGTGGGAGAACGGACCCGTGAAGGCAATGA 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 823 AGCTCATGGTGGTTTCTCCGTGTTTGCTGGTGTGGGAGAACGGACCCGTGAAGGCAATGA 882
Query 865 CTTGTACAGAGAAATGATTGAGAGTGGTGTCATCAAGCTAGGCGAGAAACAGTCTGAGAG 924
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 883 TTTGTACAGAGAAATGATTGAGAGTGGTGTCATCAAGCTAGGAGAGAAACAGTCTGAGAG 942
Query 925 CAAATGTGCTCTAGTGTATGGACAAATGAATGAGCCCCCGGGTGCCCGTGCTCGTGTTGG 984
||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 943 CAAATGTGCCCTAGTGTATGGACAAATGAATGAGCCCCCGGGTGCTCGTGCCCGTGTTGG 1002
Query 985 ACTGACTGGTTTGACTGTTGCCGAGTATTTCCGTGATGCCGAAGGCCAGGATGTCTTGCT 1044
||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct 1003 ACTGACTGGTTTGACTGTTGCTGAGTATTTCCGTGATGCTGAAGGCCAAGATGTCTTGCT 1062
Query 1045 TTTCATTGACAACATCTTCCGTTTCACCCAGGCCAACTCTGAAGTGTCTGCTTTGCTCGG 1104
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1063 TTTCATTGACAACATCTTCCGTTTCACCCAGGCCAACTCTGAAGTGTCTGCGTTGCTCGG 1122
Query 1105 TCGTATCCCGTCTGCTGTGGGTTACCAGCCAACCCTGGCTTCCGATCTTGGTGCTCTTCA 1164
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1123 TCGTATCCCGTCTGCTGTGGGGTACCAGCCAACTCTGGCTTCCGATCTTGGTGCTCTTCA 1182
Query 1165 AGAGCGAATCACTACCACCAAGAAAGGTTCAATTACCTCAGTCCAAGCCATCTATGTCCC 1224
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1183 AGAGCGAATCACAACCACCAAGAAAGGTTCAATTACCTCTGTCCAAGCCATCTATGTCCC 1242
Query 1225 TGCTGATGATTTGACAGATCCTGCTCCTGCCACAACTTTTGCTCACTTGGACGCCACAAC 1284
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1243 TGCTGATGATTTGACAGATCCTGCTCCTGCCACAACTTTTGCTCACTTGGATGCCACAAC 1302
Query 1285 TGTGCTGTCAAGACAGATTTCTGAGCTTGGTATCTACCCTGCTGTGGATCCTTTGGATTC 1344
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1303 TGTGCTTTCAAGACAGATTTCTGAGCTTGGTATCTACCCTGCTGTGGATCCTTTGGATTC 1362
Query 1345 GACGTCCCGTATGCTCTCGCCTCACATTTTGGGTGAGGAGCACTACAACACAGCTCGTGG 1404
||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||
Sbjct 1363 GACGTCCCGTATGCTCTCGCCCCACATTCTAGGTGAGGAGCACTACAACACAGCTCGTGG 1422
Query 1405 TGTGCAAAAAGTGCTACAGAACTACAAGAATTTGCAAGATATTATCGCCATTTTGGGAAT 1464
|||||| |||||| | ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1423 TGTGCAGAAAGTGTTGCAGAATTACAAGAATTTGCAAGATATTATCGCCATTTTGGGAAT 1482
Query 1465 GGATGAGTTAAGTGAAGATGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATT 1524
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1483 GGATGAGCTAAGTGAAGATGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATT 1542
Query 1525 CTTGAGTCAGCCATTCCATGTTGCTGAAATCTTCACTGGTGCCCCTGGAAAATATGTCGA 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1543 CTTGAGTCAGCCATTCCATGTTGCTGAAATCTTCACTGGTGCCCCTGGAAAATATGTCGA 1602
Query 1585 CCTTAAAGAAAACATCAACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTC 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1603 CCTTAAAGAAAACATCAACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTC 1662
Query 1645 CGAACAATCGTTTTACATGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGAT 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1663 CGAACAATCGTTTTACATGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGAT 1722
Query 1705 CGCTAAAGAGTCAGCAGCTTAGAAGCTGGATTCATCTCTTTCATATGCTTAATACTTGTC 1764
||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct 1723 CGCTAAAGAGTCAGCAGCTTAGAAGCTGGATCCATCTCTTGCATATGCTTAATACCTGTC 1782
Query 1765 TGTTTCTTGTGACAATAACGaaaa-aaaaaa-CCACTGCCTGTGAGTTACCTACCCCCAC 1822
|||||||||||||||||||||||| |||||| ||||||||||||||||||| || ||
Sbjct 1783 TGTTTCTTGTGACAATAACGAAAAGAAAAAAACCACTGCCTGTGAGTTACCCAC----AC 1838
Query 1823 CAAGCGGAATTTGAGTTCCGTATTTATAGTTTCTTTGGGTTCGGATTCCAATTGAGAGCT 1882
|||||||||||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct 1839 CAAGCGGAATTTGAGTTCCGTATTTATAGTTTCTTT-----CGAATTCC--TTGAGAGCT 1891
Query 1883 ACGAAATGATGCTGAACATATCCTTCATTCCCTTGTACTCAGATTTTTGGTTCATTTACT 1942
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1892 ACGAGATGATGCTGAACATACCCTTCATTCCCTTGTACTCAGATTTTTGGTTCATTTACT 1951
Query 1943 TCCTTGACTTGTTGAAATAAAGGTTAAGCAAGTCTTGCAGATTATGATTTCTTGATCTCA 2002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1952 TCCTTGACTTGTTGAAATAAAGGTTAAGCAAGTCTTGCAGATTATGATTTCTTGATCTCA 2011
Query 2003 GGA-TTTTTCTTTC 2015
| | ||||||||||
Sbjct 2012 G-ACTTTTTCTTTC 2024
> AT5G08670.1 | Symbols: | ATP synthase alpha/beta family protein
| chr5:2818117-2821176 REVERSE LENGTH=1976
Length=1976
Score = 2431 bits (1316), Expect = 0.0
Identities = 1746/1950 (90%), Gaps = 43/1950 (2%)
Strand=Plus/Plus
Query 45 TCATGGCGAGTCGGCGAATCTTATCATCGCTTCTCCGTTCTTCTTCCGGCAGATCTACTT 104
|||||||| |||| || |||||||||| ||||||||||| |||||||| |||||| |
Sbjct 26 TCATGGCGTCTCGGAGAGTCTTATCATCTCTTCTCCGTTCATCTTCCGGTAGATCTGCCG 85
Query 105 CTAAATCCTCCTTGATCGGTAGCCGAAACCCGAGGCTTTCATCACCAGGTCCCGCTCATC 164
| ||| || | || | ||| ||||| |||||| | || || ||||| | ||
Sbjct 86 CCAAA------TT-A--GGCAACCGTAACCCCAGGCTTCCTTCTCCTTCACCCGCGCGTC 136
Query 165 GAGCTGCGCCTTGT-GGGACTCTCCTTGGCCGAGTCGCTGAGTATTCGACATCTTCTCCG 223
|| || || ||| | || ||||| ||||| ||||| ||||| |||| ||||| ||
Sbjct 137 CCGCCGCTCCATGTAGCTAC-CTCCTCGGCCGCGTCGCCGAGTACGCGACCTCTTCACCT 195
Query 224 GCTAA-TTCGGCTGCGCCATCGTCTGCTCCTGCTAAGGATGAGGGGAAGAAGATCTATGA 282
|| || || ||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 196 GC-AAGCTCAGCTGCGCCATCTTCTGCTCCTGCTAAGGATGAGGGGAAGAAGACCTATGA 254
Query 283 TTACGGTGGCAAAGGCGCGATCGGGCGTGTGTGTCAGGTTATTGGTGCCATTGTTGATGT 342
||||||||||||||| |||||||||||||| || ||||| |||||||||||||| |||||
Sbjct 255 TTACGGTGGCAAAGGTGCGATCGGGCGTGTTTGCCAGGTCATTGGTGCCATTGTCGATGT 314
Query 343 GAGATTCGAAGATCAGGAGGGATTGCCTCCGATCATGACATCTCTCGAGGTCCAGGATCA 402
|||||| || |||||||| |||||||| || |||||||||||||||||||| ||||||||
Sbjct 315 GAGATTTGAGGATCAGGAAGGATTGCCACCAATCATGACATCTCTCGAGGTGCAGGATCA 374
Query 403 TCCCACAAGGCTGGTACTTGAGGTGTCTCATCACTTGGGTCAAAATGTCGTCAGGACCAT 462
||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 375 CCCCACAAGGCTAGTGCTTGAGGTGTCTCATCACTTGGGTCAGAATGTCGTCAGGACCAT 434
Query 463 TGCTATGGATGGTACTGAGGGTCTCGTCCGTGGAAGGAAAGTTCTCAATACTGGCGCTCC 522
||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct 435 TGCTATGGATGGTACTGAGGGTCTCGTTCGTGGAAGGAAAGTCCTCAACACTGGCGCTCC 494
Query 523 AATCACTGTTCCTGTTGGAAGGGCCACCCTTGGACGTATCATGAATGTTCTTGGCGAACC 582
||||||||| ||||| |||||||| || |||||||||||||||||||||||||| |||||
Sbjct 495 AATCACTGTACCTGTCGGAAGGGCTACTCTTGGACGTATCATGAATGTTCTTGGAGAACC 554
Query 583 CATTGACGAGAGAGGCGAAATTAAGACCGAGCATTACTTACCCATTCACAGAGACGCTCC 642
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||| || ||
Sbjct 555 TATTGACGAAAGAGGCGAAATTAAGACCGAACATTACTTACCTATTCACAGAGATGCACC 614
Query 643 AGCTTTGGTTGATTTGGCCACCGGTCAAGAGATTCTGGCTACTGGTATTAAGGTTGTTGA 702
|||||||||||| | || || || |||||||| ||||| ||||||||||||||||||||
Sbjct 615 GGCTTTGGTTGATCTAGCTACTGGGCAAGAGATCCTGGCCACTGGTATTAAGGTTGTTGA 674
Query 703 TCTCCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGGCTTTTTGGCGGTGCTGGCGTTGG 762
||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct 675 TCTTCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGTCTCTTTGGCGGTGCTGGTGTTGG 734
Query 763 GAAAACAGTGCTCATTATGGAACTGATCAACAATGTTGCCAAAGCTCATGGTGGTTTCTC 822
|||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 735 GAAAACTGTGCTTATTATGGAGCTGATCAACAATGTTGCCAAAGCTCATGGTGGTTTCTC 794
Query 823 CGTGTTTGCTGGTGTGGGAGAACGGACCCGTGAAGGCAATGACTTGTACAGAGAAATGAT 882
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 795 TGTGTTTGCTGGTGTGGGAGAACGAACCCGTGAAGGCAATGACTTGTACAGAGAAATGAT 854
Query 883 TGAGAGTGGTGTCATCAAGCTAGGCGAGAAA-CAGTCTGAGAGCAAATGTGCTCTAGTGT 941
||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||
Sbjct 855 TGAGAGTGGTGTCATCAAGCTAGGCGA-AAAGCAGTCTGAGAGCAAGTGTGCTCTAGTGT 913
Query 942 ATGGACAAATGAATGAGCCCCCGGGTGCCCGTGCTCGTGTTGGACTGACTGGTTTGACTG 1001
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 914 ACGGACAAATGAATGAGCCCCCGGGTGCCCGTGCCCGTGTTGGACTGACTGGTTTGACTG 973
Query 1002 TTGCCGAGTATTTCCGTGATGCCGAAGGCCAGGATGTCTTGCTTTTCATTGACAACATCT 1061
|||||||||||||||||||||| |||||||| || || |||||||||||||||||||| |
Sbjct 974 TTGCCGAGTATTTCCGTGATGCTGAAGGCCAAGACGTTTTGCTTTTCATTGACAACATTT 1033
Query 1062 TCCGTTTCACCCAGGCCAACTCTGAAGTGTCTGCTTTGCTCGGTCGTATCCCGTCTGCTG 1121
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1034 TCCGTTTCACTCAGGCCAACTCTGAAGTGTCTGCTTTACTCGGTCGTATCCCGTCTGCTG 1093
Query 1122 TGGGTTACCAGCCAACCCTGGCTTCCGATCTTGGTGCTCTTCAAGAGCGAATCACTACCA 1181
|||| ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||
Sbjct 1094 TGGGATACCAGCCAACTCTGGCTTCTGATCTTGGTGCTCTTCAAGAGCGAATTACTACCA 1153
Query 1182 CCAAGAAAGGTTCAATTACCTCAGTCCAAGCCATCTATGTCCCTGCTGATGATTTGACAG 1241
|||||||||| || || ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1154 CCAAGAAAGGGTCTATCACCTCAGTCCAAGCCATCTATGTACCTGCTGATGATTTGACTG 1213
Query 1242 ATCCTGCTCCTGCCACAACTTTTGCTCACTTGGACGCCACAACTGTGCTGTCAAGACAGA 1301
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1214 ATCCTGCTCCTGCTACAACTTTTGCTCACTTGGACGCCACAACTGTGCTCTCAAGACAGA 1273
Query 1302 TTTCTGAGCTTGGTATCTACCCTGCTGTGGATCCTTTGGATTCGACGTCCCGTATGCTCT 1361
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 1274 TTTCTGAGCTTGGTATCTACCCTGCTGTGGATCCTTTGGATTCAACATCCCGTATGCTGT 1333
Query 1362 CGCCTCACATTTTGGGTGAGGAGCACTACAACACAGCTCGTGGTGTGCAAAAAGTGCTAC 1421
| ||||||||| |||| |||||||| |||||||| |||||||| ||||| ||||| ||||
Sbjct 1334 CACCTCACATTCTGGGAGAGGAGCATTACAACACGGCTCGTGGCGTGCAGAAAGTTCTAC 1393
Query 1422 AGAACTACAAGAATTTGCAAGATATTATCGCCATTTTGGGAATGGATGAGTTAAGTGAAG 1481
||||||||||||| |||||||||||||| || |||||||| ||||||||| |||||||||
Sbjct 1394 AGAACTACAAGAACTTGCAAGATATTATTGCAATTTTGGGTATGGATGAGCTAAGTGAAG 1453
Query 1482 ATGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAGTCAGCCATTCC 1541
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1454 ATGACAAGTTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAGTCAGCCGTTCC 1513
Query 1542 ATGTTGCTGAAATCTTCACTGGTGCCCCTGGAAAATATGTCGACCTTAAAGAAAACATCA 1601
| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1514 ACGTTGCTGAGATCTTCACTGGTGCCCCTGGAAAATATGTCGACCTTAAAGAAAATATCA 1573
Query 1602 ACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACAATCGTTTTACA 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1574 ACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACAATCGTTTTACA 1633
Query 1662 TGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAAAGAGTCAGCAG 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1634 TGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAAAGAGTCAGCAG 1693
Query 1722 CTTA-GAAGCTGGATTCATCTCTTTCATATGCTTAATACTTGTCTGTTTCTTG-TGACAA 1779
|||| || | | |||||| |||||||| ||||||||||| ||| ||| || ||||||
Sbjct 1694 CTTAAGA-GATTGATTCAGATCTTTCAT--GCTTAATACTTCTCTTTTTTTTCCTGACAA 1750
Query 1780 TAACGaaaaaaaaaa-CCACTGCCTGTGAGTTACCTACCCCCACCAAGCGGAATTTGAGT 1838
||||||||||||||| ||| ||| ||| | || | | || ||||| |||||| |||||
Sbjct 1751 TAACGAAAAAAAAAAACCAATGC--GTGCG--AC-T-CTCCGACCAAACGGAATCTGAGT 1804
Query 1839 TCCGTATTTATAGTTTCTTTGGGTTCGGATTCCAATTGAGAGCTA-CGAA-ATGATGCTG 1896
|||||| ||||||||||||| ||||| |||||| | ||||||| | || ||||| |||
Sbjct 1805 TCCGTAATTATAGTTTCTTTTGGTTCAAATTCCA-T-GAGAGCTGGC-AAGATGATACTG 1861
Query 1897 AACATATCCTTCATTCCCTTGT-ACTCAGATTTTTGGTTCATTTACTTCCTTGACTTGTT 1955
|||| |||| |||| || || | ||| |||||||||| ||| ||||||| | |||
Sbjct 1862 AACAGATCC---ATTCACT-GTTAATCAAATTTTTGGTTGTTTTGCTTCCTT---T-GTT 1913
Query 1956 GAAATAAAGGTTAAGCAAGTCTTGCAGATT 1985
||||||||| | || || |||||||||||
Sbjct 1914 GAAATAAAGATGAAA-AA-TCTTGCAGATT 1941
> AT5G08690.1 | Symbols: | ATP synthase alpha/beta family protein
| chr5:2825713-2828662 FORWARD LENGTH=2007
Length=2007
Score = 2350 bits (1272), Expect = 0.0
Identities = 1598/1755 (91%), Gaps = 24/1755 (1%)
Strand=Plus/Plus
Query 45 TCATGGCGAGTCGGCGAATCTTATCATCGCTTCTCCGTTCTTCTTCCGGCAGATCTACTT 104
|||||||| ||| || | |||||||| ||||||||||| |||||||| |||||| |
Sbjct 25 TCATGGCGTCTCGAAGAGTTTTATCATCTCTTCTCCGTTCATCTTCCGGTAGATCTGCCG 84
Query 105 CTAAATCCTCCTTGATCGGTAGCCGAAACCCGAGGCTTTCATCACCAGGTCCCGCTCATC 164
| ||| | | | || | ||||||||| |||||| | || || ||||| | ||
Sbjct 85 CCAAA---T--TAG-TC---AACCGAAACCCCAGGCTTCCTTCTCCTTCACCCGCGCGTC 135
Query 165 GA-GCTGCGCCTTGT-GGGACTCTCCTTGGCCGAGTCGCTGAGTATTCGACATCTTCTCC 222
| || || || ||| | || ||||| ||||| ||||| |||||| |||| ||||| ||
Sbjct 136 -ACGCCGCTCCATGTAGCTAC-CTCCTCGGCCGCGTCGCCGAGTATGCGACCTCTTCACC 193
Query 223 GGCTAA-TTCGGCTGCGCCATCGTCTGCTCCTGCTAAGGATGAGGGGAAGAAGATCTATG 281
||| || || ||||||||||| |||||||||||||||||||||||||| |||| |||||
Sbjct 194 GGC-AAGCTCTGCTGCGCCATCCTCTGCTCCTGCTAAGGATGAGGGGAAAAAGACCTATG 252
Query 282 ATTACGGTGGCAAAGGCGCGATCGGGCGTGTGTGTCAGGTTATTGGTGCCATTGTTGATG 341
|||||||||||||||| |||||||||||||| |||||||| || ||||||||||| ||||
Sbjct 253 ATTACGGTGGCAAAGGTGCGATCGGGCGTGTTTGTCAGGTCATCGGTGCCATTGTCGATG 312
Query 342 TGAGATTCGAAGATCAGGAGGGATTGCCTCCGATCATGACATCTCTCGAGGTCCAGGATC 401
|||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||
Sbjct 313 TGAGATTCGAGGATCAGGAAGGATTGCCTCCGATCATGACATCTCTTGAGGTTCAGGATC 372
Query 402 ATCCCACAAGGCTGGTACTTGAGGTGTCTCATCACTTGGGTCAAAATGTCGTCAGGACCA 461
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 373 ATCCCACAAGGCTGGTGCTTGAGGTGTCTCATCATTTGGGTCAAAATGTCGTTAGGACCA 432
Query 462 TTGCTATGGATGGTACTGAGGGTCTCGTCCGTGGAAGGAAAGTTCTCAATACTGGCGCTC 521
||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||
Sbjct 433 TTGCTATGGATGGTACTGAGGGTCTTGTCCGTGGAAGGAAGGTTCTCAACACTGGTGCTC 492
Query 522 CAATCACTGTTCCTGTTGGAAGGGCCACCCTTGGACGTATCATGAATGTTCTTGGCGAAC 581
|||||||||| ||||||||||| || |||||||| |||||||||||||| ||||| ||||
Sbjct 493 CAATCACTGTACCTGTTGGAAGAGCTACCCTTGGCCGTATCATGAATGTGCTTGGAGAAC 552
Query 582 CCATTGACGAGAGAGGCGAAATTAAGACCGAGCATTACTTACCCATTCACAGAGACGCTC 641
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||
Sbjct 553 CCATTGACGAGAGAGGCGAAATCAAGACCGAGCATTACTTACCTATTCACAGAGATGCTC 612
Query 642 CAGCTTTGGTTGATTTGGCCACCGGTCAAGAGATTCTGGCTACTGGTATTAAGGTTGTTG 701
| |||||||||||| | ||||| || |||||||| ||||| |||||||||||||||||||
Sbjct 613 CGGCTTTGGTTGATCTAGCCACTGGGCAAGAGATCCTGGCCACTGGTATTAAGGTTGTTG 672
Query 702 ATCTCCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGGCTTTTTGGCGGTGCTGGCGTTG 761
|||| |||||||||||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct 673 ATCTTCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGTCTCTTTGGCGGTGCTGGTGTTG 732
Query 762 GGAAAACAGTGCTCATTATGGAACTGATCAACAATGTTGCCAAAGCTCATGGTGGTTTCT 821
||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 733 GGAAAACTGTGCTTATTATGGAGCTGATCAACAATGTTGCCAAAGCTCATGGTGGGTTCT 792
Query 822 CCGTGTTTGCTGGTGTGGGAGAACGGACCCGTGAAGGCAATGACTTGTACAGAGAAATGA 881
| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct 793 CTGTGTTTGCTGGTGTGGGGGAACGAACCCGTGAGGGCAATGACTTGTACAGAGAAATGA 852
Query 882 TTGAGAGTGGTGTCATCAAGCTAGGCGAGAAACAGTCTGAGAGCAAATGTGCTCTAGTGT 941
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 853 TTGAGAGTGGTGTCATCAAGCTAGGCGAGAAGCAGTCTGAGAGCAAATGTGCCCTAGTGT 912
Query 942 ATGGACAAATGAATGAGCCCCCGGGTGCCCGTGCTCGTGTTGGACTGACTGGTTTGACTG 1001
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 913 ATGGACAAATGAATGAGCCCCCGGGTGCTCGTGCCCGTGTTGGACTGACTGGTTTGACTG 972
Query 1002 TTGCCGAGTATTTCCGTGATGCCGAAGGCCAGGATGTCTTGCTTTTCATTGACAACATCT 1061
| || ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
Sbjct 973 TGGCTGAGTATTTCCGTGATGCTGAAGGCCAAGATGTCTTGCTTTTCATTGACAACATTT 1032
Query 1062 TCCGTTTCACCCAGGCCAACTCTGAAGTGTCTGCTTTGCTCGGTCGTATCCCGTCTGCTG 1121
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1033 TCCGTTTCACTCAGGCCAACTCTGAAGTGTCTGCTTTGCTCGGTCGTATTCCGTCTGCTG 1092
Query 1122 TGGGTTACCAGCCAACCCTGGCTTCCGATCTTGGTGCTCTTCAAGAGCGAATCACTACCA 1181
|||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||
Sbjct 1093 TGGGTTACCAGCCAACTCTGGCTTCTGATCTTGGTGCTCTGCAAGAGCGAATCACAACCA 1152
Query 1182 CCAAGAAAGGTTCAATTACCTCAGTCCAAGCCATCTATGTCCCTGCTGATGATTTGACAG 1241
|||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1153 CCAAGAAAGGGTCTATCACCTCAGTCCAAGCCATCTATGTCCCTGCTGATGATTTGACGG 1212
Query 1242 ATCCTGCTCCTGCCACAACTTTTGCTCACTTGGACGCCACAACTGTGCTGTCAAGACAGA 1301
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1213 ATCCTGCTCCTGCCACAACTTTTGCTCACTTGGACGCCACAACCGTGCTGTCAAGACAGA 1272
Query 1302 TTTCTGAGCTTGGTATCTACCCTGCTGTGGATCCTTTGGATTCGACGTCCCGTATGCTCT 1361
|||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1273 TTTCTGAGCTCGGTATCTATCCTGCTGTGGATCCTTTGGATTCGACATCCCGTATGCTCT 1332
Query 1362 CGCCTCACATTTTGGGTGAGGAGCACTACAACACAGCTCGTGGTGTGCAAAAAGTGCTAC 1421
| || |||||| |||||||||||||||||||||| |||||||||||||| |||||| | |
Sbjct 1333 CCCCCCACATTCTGGGTGAGGAGCACTACAACACTGCTCGTGGTGTGCAGAAAGTGTTGC 1392
Query 1422 AGAACTACAAGAATTTGCAAGATATTATCGCCATTTTGGGAATGGATGAGTTAAGTGAAG 1481
|||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 1393 AGAACTACAAAAATTTGCAAGATATTATTGCCATTTTGGGAATGGATGAGCTAAGTGAAG 1452
Query 1482 ATGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAGTCAGCCATTCC 1541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1453 ATGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAGTCAGCCATTCC 1512
Query 1542 ATGTTGCTGAAATCTTCACTGGTGCCCCTGGAAAATATGTCGACCTTAAAGAAAACATCA 1601
|||||||||| |||||||| ||||||||||||||||| || || ||||| ||||||||||
Sbjct 1513 ATGTTGCTGAGATCTTCACGGGTGCCCCTGGAAAATACGTTGATCTTAAGGAAAACATCA 1572
Query 1602 ACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACAATCGTTTTACA 1661
|||||||||||||| | | || || ||||||||||||||||||||||||||||||||||
Sbjct 1573 ACAGTTTCCAGGGTCTACTCGACGGTAAGTACGATGATCTTTCCGAACAATCGTTTTACA 1632
Query 1662 TGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAAAGAGTCAGCAG 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1633 TGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAAAGAGTCAGCAG 1692
Query 1722 CTTA-G-AAGCTGGATTCATCTCTTTCATATGCTTAATACTTGTCTGT-TTCTT--GT-G 1775
|||| | || || ||||||||||||||||||| |||||||| ||| | ||||| || |
Sbjct 1693 CTTAAGGAAT-TG-ATTCATCTCTTTCATATGCATAATACTTCTCT-TCTTCTTTTGTTG 1749
Query 1776 ACAATAACGaaaaaa 1790
|||||||||||||||
Sbjct 1750 ACAATAACGAAAAAA 1764
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 99848884005
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5