BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487711
Length=1737
Score E
Sequences producing significant alignments: (Bits) Value
AT5G08670.1 | Symbols: | ATP synthase alpha/beta family protei... 2687 0.0
AT5G08690.1 | Symbols: | ATP synthase alpha/beta family protei... 2671 0.0
AT5G08680.1 | Symbols: | ATP synthase alpha/beta family protei... 2385 0.0
> AT5G08670.1 | Symbols: | ATP synthase alpha/beta family protein
| chr5:2818117-2821176 REVERSE LENGTH=1976
Length=1976
Score = 2687 bits (1455), Expect = 0.0
Identities = 1653/1749 (95%), Gaps = 12/1749 (1%)
Strand=Plus/Plus
Query 1 ACACACACCCACTCATGGCGTCTCGGAGAGTTTTATCATCTCTTCTCCGTTCATCTTCCG 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 14 ACACACACCCACTCATGGCGTCTCGGAGAGTCTTATCATCTCTTCTCCGTTCATCTTCCG 73
Query 61 GCAGATCTGCTGCCAAACTAGGCAACCGTAACCCCAGGCTTCCTTCTCCTTCACCTGCGC 120
| |||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 74 GTAGATCTGCCGCCAAATTAGGCAACCGTAACCCCAGGCTTCCTTCTCCTTCACCCGCGC 133
Query 121 GTCACGCCGCTCCATGTAGCTACCTCCTCGGCCGCGTCGCCGAGTACGCCACCTCTTCAC 180
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 134 GTCCCGCCGCTCCATGTAGCTACCTCCTCGGCCGCGTCGCCGAGTACGCGACCTCTTCAC 193
Query 181 CGGCAAGCTCAGCTGCGCCATCCTCTGCTCCTGCTAAGGATGAGGGGAAGAAGACCTATG 240
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 194 CTGCAAGCTCAGCTGCGCCATCTTCTGCTCCTGCTAAGGATGAGGGGAAGAAGACCTATG 253
Query 241 ATTACGGAGGCAAAGGTGCGATCGGGCGTGTTTGCCAAGTCATTGGTGCCATTGTTGATG 300
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 254 ATTACGGTGGCAAAGGTGCGATCGGGCGTGTTTGCCAGGTCATTGGTGCCATTGTCGATG 313
Query 301 TGAGATTCGAAGATCAGGAAGGATTGCCTCCGATCATGACATCTCTCGAGGTGCAGGATC 360
||||||| || ||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 314 TGAGATTTGAGGATCAGGAAGGATTGCCACCAATCATGACATCTCTCGAGGTGCAGGATC 373
Query 361 ACCCCACAAGGCTGGTACTTGAGGTGTCCCACCATTTGGGTCAAAATGTCGTCAGGACCA 420
||||||||||||| || ||||||||||| || || |||||||| ||||||||||||||||
Sbjct 374 ACCCCACAAGGCTAGTGCTTGAGGTGTCTCATCACTTGGGTCAGAATGTCGTCAGGACCA 433
Query 421 TTGCTATGGATGGTACTGAGGGTCTTGTCCGTGGAAGGAAAGTTCTCAACACTGGTGCTC 480
||||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||
Sbjct 434 TTGCTATGGATGGTACTGAGGGTCTCGTTCGTGGAAGGAAAGTCCTCAACACTGGCGCTC 493
Query 481 CAATCACTGTGCCTGTTGGAAGAGCTACCCTTGGACGTATCATGAATGTTCTTGGAGAAC 540
|||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 494 CAATCACTGTACCTGTCGGAAGGGCTACTCTTGGACGTATCATGAATGTTCTTGGAGAAC 553
Query 541 CTATTGACGAGAGAGGCGAAATTAAGACCGAACATTACTTACCTATTCACAGAGATGCAC 600
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 554 CTATTGACGAAAGAGGCGAAATTAAGACCGAACATTACTTACCTATTCACAGAGATGCAC 613
Query 601 CGGCTTTGGTTGATCTAGCTACTGGGCAAGAGATCCTGGCCACTGGTATTAAGGTTGTTG 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 614 CGGCTTTGGTTGATCTAGCTACTGGGCAAGAGATCCTGGCCACTGGTATTAAGGTTGTTG 673
Query 661 ATCTTCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGTCTCTTTGGCGGAGCTGGTGTTG 720
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 674 ATCTTCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGTCTCTTTGGCGGTGCTGGTGTTG 733
Query 721 GGAAAACTGTGCTTATTATGGAACTGATCAACAATGTTGCAAAAGCTCATGGTGGTTTCT 780
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 734 GGAAAACTGTGCTTATTATGGAGCTGATCAACAATGTTGCCAAAGCTCATGGTGGTTTCT 793
Query 781 CTGTGTTTGCTGGTGTGGGAGAACGAACCCGTGAAGGCAATGACTTGTACAGAGAAATGA 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 794 CTGTGTTTGCTGGTGTGGGAGAACGAACCCGTGAAGGCAATGACTTGTACAGAGAAATGA 853
Query 841 TTGAGAGTGGTGTCATCAAGCTAGGCGAGAAGCAGTCTGAGAGCAAATGTGCTCTAGTGT 900
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 854 TTGAGAGTGGTGTCATCAAGCTAGGCGAAAAGCAGTCTGAGAGCAAGTGTGCTCTAGTGT 913
Query 901 ATGGACAAATGAATGAGCCCCCGGGTGCCCGTGCTCGTGTTGGACTGACTGGTTTGACTG 960
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 914 ACGGACAAATGAATGAGCCCCCGGGTGCCCGTGCCCGTGTTGGACTGACTGGTTTGACTG 973
Query 961 TTGCCGAGTATTTCCGTGATGCTGAAGGCCAGGATGTCTTGCTTTTCATTGACAACATCT 1020
||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |
Sbjct 974 TTGCCGAGTATTTCCGTGATGCTGAAGGCCAAGACGTTTTGCTTTTCATTGACAACATTT 1033
Query 1021 TCCGTTTCACCCAGGCCAACTCTGAAGTGTCTGCTTTGCTCGGTCGTATCCCGTCTGCTG 1080
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1034 TCCGTTTCACTCAGGCCAACTCTGAAGTGTCTGCTTTACTCGGTCGTATCCCGTCTGCTG 1093
Query 1081 TGGGTTACCAGCCAACTCTGGCTTCTGATCTTGGTGCTCTTCAAGAGCGAATCACAACCA 1140
|||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 1094 TGGGATACCAGCCAACTCTGGCTTCTGATCTTGGTGCTCTTCAAGAGCGAATTACTACCA 1153
Query 1141 CCAAGAAAGGTTCAATTACCTCAGTCCAAGCCATCTATGTCCCTGCTGATGATTTGACAG 1200
|||||||||| || || ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1154 CCAAGAAAGGGTCTATCACCTCAGTCCAAGCCATCTATGTACCTGCTGATGATTTGACTG 1213
Query 1201 ATCCTGCTCCTGCCACAACATTTGCTCACTTGGACGCCACAACTGTGCTTTCAAGACAGA 1260
||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1214 ATCCTGCTCCTGCTACAACTTTTGCTCACTTGGACGCCACAACTGTGCTCTCAAGACAGA 1273
Query 1261 TTTCTGAGCTTGGTATCTATCCTGCTGTGGATCCTTTGGATTCGACGTCCCGTATGCTCT 1320
||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| |
Sbjct 1274 TTTCTGAGCTTGGTATCTACCCTGCTGTGGATCCTTTGGATTCAACATCCCGTATGCTGT 1333
Query 1321 CGCCCCACATTCTTGGTGAGGAGCACTACAACACTGCTCGTGGTGTGCAAAAAGTGCTAC 1380
| || |||||||| || |||||||| |||||||| |||||||| ||||| ||||| ||||
Sbjct 1334 CACCTCACATTCTGGGAGAGGAGCATTACAACACGGCTCGTGGCGTGCAGAAAGTTCTAC 1393
Query 1381 AGAACTACAAGAACTTGCAAGATATTATCGCCATTTTGGGTATGGATGAGCTAAGTGAAG 1440
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1394 AGAACTACAAGAACTTGCAAGATATTATTGCAATTTTGGGTATGGATGAGCTAAGTGAAG 1453
Query 1441 ATGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAGTCAGCCATTCC 1500
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1454 ATGACAAGTTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAGTCAGCCGTTCC 1513
Query 1501 ATGTTGCTGAAATCTTTACTGGTGCCCCTGGAAAATATGTCGACCTTAAAGAAAACATTA 1560
| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct 1514 ACGTTGCTGAGATCTTCACTGGTGCCCCTGGAAAATATGTCGACCTTAAAGAAAATATCA 1573
Query 1561 ACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACAATCGTTTTACA 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1574 ACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACAATCGTTTTACA 1633
Query 1621 TGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAAAGAGTCGGCAG 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1634 TGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAAAGAGTCAGCAG 1693
Query 1681 CTTAAGGGATT-AT---G--CTTA-ATACTTC-T-CTTCT-TCTTTTGT--TGACAATAA 1728
|||||| |||| || | ||| || ||| | ||||| | |||| | |||||||||
Sbjct 1694 CTTAAGAGATTGATTCAGATCTTTCATGCTTAATACTTCTCTTTTTTTTCCTGACAATAA 1753
Query 1729 CGaaaaaaa 1737
|||||||||
Sbjct 1754 CGAAAAAAA 1762
> AT5G08690.1 | Symbols: | ATP synthase alpha/beta family protein
| chr5:2825713-2828662 FORWARD LENGTH=2007
Length=2007
Score = 2671 bits (1446), Expect = 0.0
Identities = 1652/1751 (94%), Gaps = 16/1751 (1%)
Strand=Plus/Plus
Query 2 CACACACCCACTCATGGCGTCTCGGAGAGTTTTATCATCTCTTCTCCGTTCATCTTCCGG 61
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 14 CACACACCCACTCATGGCGTCTCGAAGAGTTTTATCATCTCTTCTCCGTTCATCTTCCGG 73
Query 62 CAGATCTGCTGCCAAACTAGGCAACCGTAACCCCAGGCTTCCTTCTCCTTCACCTGCGCG 121
|||||||| |||||| ||| |||||| |||||||||||||||||||||||||| |||||
Sbjct 74 TAGATCTGCCGCCAAATTAGTCAACCGAAACCCCAGGCTTCCTTCTCCTTCACCCGCGCG 133
Query 122 TCACGCCGCTCCATGTAGCTACCTCCTCGGCCGCGTCGCCGAGTACGCCACCTCTTCACC 181
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 134 TCACGCCGCTCCATGTAGCTACCTCCTCGGCCGCGTCGCCGAGTATGCGACCTCTTCACC 193
Query 182 GGCAAGCTCAGCTGCGCCATCCTCTGCTCCTGCTAAGGATGAGGGGAAGAAGACCTATGA 241
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 194 GGCAAGCTCTGCTGCGCCATCCTCTGCTCCTGCTAAGGATGAGGGGAAAAAGACCTATGA 253
Query 242 TTACGGAGGCAAAGGTGCGATCGGGCGTGTTTGCCAAGTCATTGGTGCCATTGTTGATGT 301
|||||| |||||||||||||||||||||||||| || ||||| ||||||||||| |||||
Sbjct 254 TTACGGTGGCAAAGGTGCGATCGGGCGTGTTTGTCAGGTCATCGGTGCCATTGTCGATGT 313
Query 302 GAGATTCGAAGATCAGGAAGGATTGCCTCCGATCATGACATCTCTCGAGGTGCAGGATCA 361
||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 314 GAGATTCGAGGATCAGGAAGGATTGCCTCCGATCATGACATCTCTTGAGGTTCAGGATCA 373
Query 362 CCCCACAAGGCTGGTACTTGAGGTGTCCCACCATTTGGGTCAAAATGTCGTCAGGACCAT 421
|||||||||||||| ||||||||||| || |||||||||||||||||||| ||||||||
Sbjct 374 TCCCACAAGGCTGGTGCTTGAGGTGTCTCATCATTTGGGTCAAAATGTCGTTAGGACCAT 433
Query 422 TGCTATGGATGGTACTGAGGGTCTTGTCCGTGGAAGGAAAGTTCTCAACACTGGTGCTCC 481
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 434 TGCTATGGATGGTACTGAGGGTCTTGTCCGTGGAAGGAAGGTTCTCAACACTGGTGCTCC 493
Query 482 AATCACTGTGCCTGTTGGAAGAGCTACCCTTGGACGTATCATGAATGTTCTTGGAGAACC 541
||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 494 AATCACTGTACCTGTTGGAAGAGCTACCCTTGGCCGTATCATGAATGTGCTTGGAGAACC 553
Query 542 TATTGACGAGAGAGGCGAAATTAAGACCGAACATTACTTACCTATTCACAGAGATGCACC 601
|||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||
Sbjct 554 CATTGACGAGAGAGGCGAAATCAAGACCGAGCATTACTTACCTATTCACAGAGATGCTCC 613
Query 602 GGCTTTGGTTGATCTAGCTACTGGGCAAGAGATCCTGGCCACTGGTATTAAGGTTGTTGA 661
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 614 GGCTTTGGTTGATCTAGCCACTGGGCAAGAGATCCTGGCCACTGGTATTAAGGTTGTTGA 673
Query 662 TCTTCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGTCTCTTTGGCGGAGCTGGTGTTGG 721
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 674 TCTTCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGTCTCTTTGGCGGTGCTGGTGTTGG 733
Query 722 GAAAACTGTGCTTATTATGGAACTGATCAACAATGTTGCAAAAGCTCATGGTGGTTTCTC 781
||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||
Sbjct 734 GAAAACTGTGCTTATTATGGAGCTGATCAACAATGTTGCCAAAGCTCATGGTGGGTTCTC 793
Query 782 TGTGTTTGCTGGTGTGGGAGAACGAACCCGTGAAGGCAATGACTTGTACAGAGAAATGAT 841
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 794 TGTGTTTGCTGGTGTGGGGGAACGAACCCGTGAGGGCAATGACTTGTACAGAGAAATGAT 853
Query 842 TGAGAGTGGTGTCATCAAGCTAGGCGAGAAGCAGTCTGAGAGCAAATGTGCTCTAGTGTA 901
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 854 TGAGAGTGGTGTCATCAAGCTAGGCGAGAAGCAGTCTGAGAGCAAATGTGCCCTAGTGTA 913
Query 902 TGGACAAATGAATGAGCCCCCGGGTGCCCGTGCTCGTGTTGGACTGACTGGTTTGACTGT 961
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 914 TGGACAAATGAATGAGCCCCCGGGTGCTCGTGCCCGTGTTGGACTGACTGGTTTGACTGT 973
Query 962 TGCCGAGTATTTCCGTGATGCTGAAGGCCAGGATGTCTTGCTTTTCATTGACAACATCTT 1021
|| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 974 GGCTGAGTATTTCCGTGATGCTGAAGGCCAAGATGTCTTGCTTTTCATTGACAACATTTT 1033
Query 1022 CCGTTTCACCCAGGCCAACTCTGAAGTGTCTGCTTTGCTCGGTCGTATCCCGTCTGCTGT 1081
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1034 CCGTTTCACTCAGGCCAACTCTGAAGTGTCTGCTTTGCTCGGTCGTATTCCGTCTGCTGT 1093
Query 1082 GGGTTACCAGCCAACTCTGGCTTCTGATCTTGGTGCTCTTCAAGAGCGAATCACAACCAC 1141
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1094 GGGTTACCAGCCAACTCTGGCTTCTGATCTTGGTGCTCTGCAAGAGCGAATCACAACCAC 1153
Query 1142 CAAGAAAGGTTCAATTACCTCAGTCCAAGCCATCTATGTCCCTGCTGATGATTTGACAGA 1201
||||||||| || || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1154 CAAGAAAGGGTCTATCACCTCAGTCCAAGCCATCTATGTCCCTGCTGATGATTTGACGGA 1213
Query 1202 TCCTGCTCCTGCCACAACATTTGCTCACTTGGACGCCACAACTGTGCTTTCAAGACAGAT 1261
|||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1214 TCCTGCTCCTGCCACAACTTTTGCTCACTTGGACGCCACAACCGTGCTGTCAAGACAGAT 1273
Query 1262 TTCTGAGCTTGGTATCTATCCTGCTGTGGATCCTTTGGATTCGACGTCCCGTATGCTCTC 1321
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1274 TTCTGAGCTCGGTATCTATCCTGCTGTGGATCCTTTGGATTCGACATCCCGTATGCTCTC 1333
Query 1322 GCCCCACATTCTTGGTGAGGAGCACTACAACACTGCTCGTGGTGTGCAAAAAGTGCTACA 1381
||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | ||
Sbjct 1334 CCCCCACATTCTGGGTGAGGAGCACTACAACACTGCTCGTGGTGTGCAGAAAGTGTTGCA 1393
Query 1382 GAACTACAAGAACTTGCAAGATATTATCGCCATTTTGGGTATGGATGAGCTAAGTGAAGA 1441
||||||||| || |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1394 GAACTACAAAAATTTGCAAGATATTATTGCCATTTTGGGAATGGATGAGCTAAGTGAAGA 1453
Query 1442 TGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAGTCAGCCATTCCA 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1454 TGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAGTCAGCCATTCCA 1513
Query 1502 TGTTGCTGAAATCTTTACTGGTGCCCCTGGAAAATATGTCGACCTTAAAGAAAACATTAA 1561
||||||||| ||||| || ||||||||||||||||| || || ||||| |||||||| ||
Sbjct 1514 TGTTGCTGAGATCTTCACGGGTGCCCCTGGAAAATACGTTGATCTTAAGGAAAACATCAA 1573
Query 1562 CAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACAATCGTTTTACAT 1621
||||||||||||| | | || || |||||||||||||||||||||||||||||||||||
Sbjct 1574 CAGTTTCCAGGGTCTACTCGACGGTAAGTACGATGATCTTTCCGAACAATCGTTTTACAT 1633
Query 1622 GGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAAAGAGTCGGCAGC 1681
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1634 GGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAAAGAGTCAGCAGC 1693
Query 1682 TTAAGG----GATT-ATG-CTT--A-AT--A-----CTTCTCTTCTTCTTTTGTTGACAA 1725
|||||| |||| || ||| | || | ||||||||||||||||||||||||
Sbjct 1694 TTAAGGAATTGATTCATCTCTTTCATATGCATAATACTTCTCTTCTTCTTTTGTTGACAA 1753
Query 1726 TAACGaaaaaa 1736
|||||||||||
Sbjct 1754 TAACGAAAAAA 1764
> AT5G08680.1 | Symbols: | ATP synthase alpha/beta family protein
| chr5:2821928-2824966 FORWARD LENGTH=2027
Length=2027
Score = 2385 bits (1291), Expect = 0.0
Identities = 1564/1695 (92%), Gaps = 22/1695 (1%)
Strand=Plus/Plus
Query 6 CACC-CACTCATGGCGTCTCGGAGAGTTTTATCATCTCTTCTCCGTTCATCTTCCG-GCA 63
|||| || |||||||| |||| || | |||||||| ||||||||||| |||| || | |
Sbjct 55 CACCACAGTCATGGCGAGTCGGCGAATCTTATCATCGCTTCTCCGTTCTTCTT-CGAGTA 113
Query 64 GATCTGCTGCCAAA-----C-T-A--GGCAACCGTAACCCCAGGC-TTCCTTCTCC-TTC 112
||||| || | ||| | | | || | ||| ||||| |||| || | | || ||
Sbjct 114 GATCTACTTCTAAATCCTCCTTGATCGGGAGCCGAAACCCGAGGCTTTTATCCCCCGGTC 173
Query 113 ACCTGCGCGT-CACGCCGCTCCATGTAGCTAC-CTCCTCGGCCGCGTCGCCGAGTACGCC 170
|| |||| | | |||||||||||| | || ||||| ||||| ||||||||||| |
Sbjct 174 -CC-GCGCATGGA-GCCGCTCCATGT-GGGACTCTCCTTGGCCGAGTCGCCGAGTATTCG 229
Query 171 ACCTCTTCACCGGC-AAGCTCAGCTGCGCCATCCTCTGCTCCTGCTAAGGATGAGGGGAA 229
|| ||||| ||||| || || ||||| ||||| |||||||||||||| |||||||| ||
Sbjct 230 ACTTCTTCTCCGGCTAA-TTCGGCTGCACCATCTTCTGCTCCTGCTAAAGATGAGGGAAA 288
Query 230 GAAGACCTATGATTACGGAGGCAAAGGTGCGATCGGGCGTGTTTGCCAAGTCATTGGTGC 289
|||||||||||||||||| |||||||| |||||||||||||| || || || ||||||||
Sbjct 289 GAAGACCTATGATTACGGTGGCAAAGGCGCGATCGGGCGTGTGTGTCAGGTTATTGGTGC 348
Query 290 CATTGTTGATGTGAGATTCGAAGATCAGGAAGGATTGCCTCCGATCATGACATCTCTCGA 349
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 349 CATTGTTGATGTGAGATTCGAAGATCAGGAGGGATTGCCTCCGATCATGACATCTCTCGA 408
Query 350 GGTGCAGGATCACCCCACAAGGCTGGTACTTGAGGTGTCCCACCATTTGGGTCAAAATGT 409
||| |||||||| || |||||| |||| ||||||||||| || || ||||||||||||||
Sbjct 409 GGTACAGGATCATCCAACAAGGTTGGTCCTTGAGGTGTCTCATCACTTGGGTCAAAATGT 468
Query 410 CGTCAGGACCATTGCTATGGATGGTACTGAGGGTCTTGTCCGTGGAAGGAAAGTTCTCAA 469
||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 469 CGTTAGGACCATTGCTATGGATGGTACTGAGGGTCTCGTCCGTGGAAGGAAGGTTCTCAA 528
Query 470 CACTGGTGCTCCAATCACTGTGCCTGTTGGAAGAGCTACCCTTGGACGTATCATGAATGT 529
||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| ||
Sbjct 529 CACTGGTGCTCCAATCACTGTTCCTGTTGGAAGGGCCACCCTTGGACGTATCATGAACGT 588
Query 530 TCTTGGAGAACCTATTGACGAGAGAGGCGAAATTAAGACCGAACATTACTTACCTATTCA 589
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 589 TCTTGGAGAACCTATTGACGAGAGAGGCGAAATTAAGACCGAGCATTACTTACCCATTCA 648
Query 590 CAGAGATGCACCGGCTTTGGTTGATCTAGCTACTGGGCAAGAGATCCTGGCCACTGGTAT 649
|||||| || || |||||||||||| | || || || |||||||| || || ||||||||
Sbjct 649 CAGAGACGCTCCAGCTTTGGTTGATTTGGCCACCGGTCAAGAGATTCTCGCTACTGGTAT 708
Query 650 TAAGGTTGTTGATCTTCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGTCTCTTTGGCGG 709
||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||
Sbjct 709 TAAGGTTGTTGATCTCCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGGCTTTTTGGCGG 768
Query 710 AGCTGGTGTTGGGAAAACTGTGCTTATTATGGAACTGATCAACAATGTTGCAAAAGCTCA 769
||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||
Sbjct 769 TGCTGGTGTTGGGAAAACAGTGCTCATTATGGAACTGATTAACAATGTTGCCAAAGCTCA 828
Query 770 TGGTGGTTTCTCTGTGTTTGCTGGTGTGGGAGAACGAACCCGTGAAGGCAATGACTTGTA 829
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 829 TGGTGGTTTCTCCGTGTTTGCTGGTGTGGGAGAACGGACCCGTGAAGGCAATGATTTGTA 888
Query 830 CAGAGAAATGATTGAGAGTGGTGTCATCAAGCTAGGCGAGAAGCAGTCTGAGAGCAAATG 889
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 889 CAGAGAAATGATTGAGAGTGGTGTCATCAAGCTAGGAGAGAAACAGTCTGAGAGCAAATG 948
Query 890 TGCTCTAGTGTATGGACAAATGAATGAGCCCCCGGGTGCCCGTGCTCGTGTTGGACTGAC 949
||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 949 TGCCCTAGTGTATGGACAAATGAATGAGCCCCCGGGTGCTCGTGCCCGTGTTGGACTGAC 1008
Query 950 TGGTTTGACTGTTGCCGAGTATTTCCGTGATGCTGAAGGCCAGGATGTCTTGCTTTTCAT 1009
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1009 TGGTTTGACTGTTGCTGAGTATTTCCGTGATGCTGAAGGCCAAGATGTCTTGCTTTTCAT 1068
Query 1010 TGACAACATCTTCCGTTTCACCCAGGCCAACTCTGAAGTGTCTGCTTTGCTCGGTCGTAT 1069
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1069 TGACAACATCTTCCGTTTCACCCAGGCCAACTCTGAAGTGTCTGCGTTGCTCGGTCGTAT 1128
Query 1070 CCCGTCTGCTGTGGGTTACCAGCCAACTCTGGCTTCTGATCTTGGTGCTCTTCAAGAGCG 1129
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1129 CCCGTCTGCTGTGGGGTACCAGCCAACTCTGGCTTCCGATCTTGGTGCTCTTCAAGAGCG 1188
Query 1130 AATCACAACCACCAAGAAAGGTTCAATTACCTCAGTCCAAGCCATCTATGTCCCTGCTGA 1189
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1189 AATCACAACCACCAAGAAAGGTTCAATTACCTCTGTCCAAGCCATCTATGTCCCTGCTGA 1248
Query 1190 TGATTTGACAGATCCTGCTCCTGCCACAACATTTGCTCACTTGGACGCCACAACTGTGCT 1249
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1249 TGATTTGACAGATCCTGCTCCTGCCACAACTTTTGCTCACTTGGATGCCACAACTGTGCT 1308
Query 1250 TTCAAGACAGATTTCTGAGCTTGGTATCTATCCTGCTGTGGATCCTTTGGATTCGACGTC 1309
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1309 TTCAAGACAGATTTCTGAGCTTGGTATCTACCCTGCTGTGGATCCTTTGGATTCGACGTC 1368
Query 1310 CCGTATGCTCTCGCCCCACATTCTTGGTGAGGAGCACTACAACACTGCTCGTGGTGTGCA 1369
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1369 CCGTATGCTCTCGCCCCACATTCTAGGTGAGGAGCACTACAACACAGCTCGTGGTGTGCA 1428
Query 1370 AAAAGTGCTACAGAACTACAAGAACTTGCAAGATATTATCGCCATTTTGGGTATGGATGA 1429
|||||| | ||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 1429 GAAAGTGTTGCAGAATTACAAGAATTTGCAAGATATTATCGCCATTTTGGGAATGGATGA 1488
Query 1430 GCTAAGTGAAGATGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAG 1489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1489 GCTAAGTGAAGATGACAAGCTGACTGTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAG 1548
Query 1490 TCAGCCATTCCATGTTGCTGAAATCTTTACTGGTGCCCCTGGAAAATATGTCGACCTTAA 1549
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1549 TCAGCCATTCCATGTTGCTGAAATCTTCACTGGTGCCCCTGGAAAATATGTCGACCTTAA 1608
Query 1550 AGAAAACATTAACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACA 1609
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1609 AGAAAACATCAACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACA 1668
Query 1610 ATCGTTTTACATGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAA 1669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1669 ATCGTTTTACATGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAA 1728
Query 1670 AGAGTCGGCAGCTTA 1684
|||||| ||||||||
Sbjct 1729 AGAGTCAGCAGCTTA 1743
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85893132495
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5