BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487739
Length=1156
Score E
Sequences producing significant alignments: (Bits) Value
AT5G09290.1 | Symbols: | Inositol monophosphatase family prote... 1812 0.0
AT5G64000.1 | Symbols: SAL2, ATSAL2 | Inositol monophosphatase ... 374 1e-102
> AT5G09290.1 | Symbols: | Inositol monophosphatase family protein
| chr5:2882427-2884229 FORWARD LENGTH=1176
Length=1176
Score = 1812 bits (981), Expect = 0.0
Identities = 1098/1156 (95%), Gaps = 1/1156 (0%)
Strand=Plus/Plus
Query 1 TGTTTCGATGTCTTATGAGAAGGAGCTTGCTGCTGCTAAAAAAGCCGTCTCTCTCGCTGC 60
|||||||||| |||| ||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct 1 TGTTTCGATGCCTTACGAGAAAGAGCTCGCTGCTGCTAAGAAAGCCGTCTCTCTAGCTGC 60
Query 61 TCGTCTCAGCCAGGCAGTGCAGAAGTCTCTGTTGCAATCAGGCGTCCGGTCAAAATCTGA 120
|||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 61 TCGTCTCAGCCAGGAAGTGCAGAAGTCTCTGTTGCAATCAGATGTCCGGTCAAAATCTGA 120
Query 121 TAAAAGTCCGGTTACAGCTGCTGATTATGGATCCCAAGCTGTGATCAGTCATGTGCTAGA 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 121 TAAAAGTCCGGTTACAGCTGCTGATTATGGATCCCAAGCTGTGATCAGTCATGTACTAGA 180
Query 181 GAAAGAACTTCACCCTGAACCACTATACTTGGTTGCTGAAGAGAATGCAGAAGATCTGCA 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GAGAGAACTTCACCCTGAACCACTATACTTGGTTGCTGAAGAGAATGCAGAAGATCTGCA 240
Query 241 AAAGAGTGGCGCGGAGGAATTTCTAGAAAGCATCACTAAGCTTGTGAACAATGCTCTACC 300
|||| |||||| |||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 241 CAAGAATGGCGCCGAGGAATTTCTAGAAAGCATTACTAAGCTTGTGAACAATGCTCTAGC 300
Query 301 TTCTGATGATTCCTACGCCAACTCTTCTCTTTCAGTGGAAGATGTAAGGAAGGCAATAGA 360
|||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||
Sbjct 301 TTCTGATGATTCCTACGCCAACTCTTCTCTTTCAATGGATGATGTAAGGAAGGCGATAGA 360
Query 361 CCACGGGAGGTCACAAGGCGGTTCCAATGGTCGCCATTGGATTCTTGATCCTGTGGATGG 420
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||
Sbjct 361 CCACGGGAGGTCACAAGGCGGTTCCAGTGGCCGCCATTGGATTCTTGATCCTGTTGATGG 420
Query 421 AACCAGAGGGTTTGTAAAAGGAGAGGATTACGCTGTGGCATTGGCTTTGCTTGTGGAAGG 480
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 421 AACCAGAGGGTTTGTAAAAGGAGAGGAATACGCTGTGGCATTAGCTTTGCTTGTGGAAGG 480
Query 481 CAAAGTAGTGCTCGGTGCCATGGCTTGCCCGAAACTTGAGAATCACAAGTCTTCTTCTTC 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CAAAGTAGTGCTCGGTGTCATGGCTTGCCCGAAACTTGAGAATCACAAGTCTTCTTCTTC 540
Query 541 AGGATGCCTTTTCTTTGCTACAGTGGGAGGTGGAGCTTACGTGCAATCGCTTGAAGGAGA 600
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct 541 AGGATGCCTTTTCTTTGCTACAGTGGGAGAAGGAGCTTATGTGCAATCGCTTGAAGGCGA 600
Query 601 CTCTCATCCTCCACAGAAGGTGCAAGTGAGCAACATTGAGAATCCTGAAGAAGCAACCTT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 CTCTCATCCTCCACAGAAGGTGCAAGTGAGCAACATTGAGAATCCTGAAGAAGCAACCTT 660
Query 661 TGTCGAATCATCCCACAAACCAATCCCCATCCATAGCTCCATTGCCAATAAACTTGGGAT 720
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TGTGGAATCATCCCACAAACCAATCCCCATCCATAGCTCCATTGCCAATAAACTTGGGAT 720
Query 721 CAAAGCTCCACCTCTAAGAATCCATAGTCAAGTGAAGTACGCTGCTCTAGCTCGAGGAGA 780
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 721 CAAAGCTCCACCTCTAAGAATCCATAGTCAAGTGAAGTACGCAGCTCTGGCTCGAGGAGA 780
Query 781 TGCAGAGATATACTTGCGTTTCACTCTCAAAGGGTACCGTGAGTCCATATGGAACCATGC 840
||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||
Sbjct 781 TGCAGAGATATACTTGCGTTTCACTCTTAAAGGGTACCGAGAGTTCATATGGAACCATGC 840
Query 841 TGCTGGTGCAATCATCACCACAGAAGCTGGAGGTGTAGTTTGCGATGCTGATGGGAATCC 900
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 841 TGCTGGTGCAATCATCACAACAGAAGCTGGAGGTGTAGTTTGCGATGCTGACGGGAATCC 900
Query 901 TCTGGACTTCTCGAGAGGAAAGCATCTTGAACACAATACAGGGATCGTGGTCAGCACCCA 960
||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |
Sbjct 901 TCTGGACTTCTCGAGAGGAAATCATCTTGAACACAAAACAGGGATCGTGGTCAGCACCAA 960
Query 961 GAAGCTCATGCCACGGATCTTGAAGGCCGTCAGAGAATCCATGGAAGAGGAAAAGCTTCT 1020
||| || ||||||||| ||||||| ||| | ||||||||||| |||||||| | ||||||
Sbjct 961 GAACCTTATGCCACGGCTCTTGAAAGCCATTAGAGAATCCATAGAAGAGGAGATGCTTCT 1020
Query 1021 CTCTGAGACGCAACTGAAACTGTAATATATGTACAGTCTGAAATAGCTATCTGGTGTATA 1080
||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 1021 CTCTGAGACACAACTGAAACTGTAATATATGTACTGCCTGAAATAGCTATCTGGTGTATA 1080
Query 1081 TCACGCATCTGCCATTGTGTACTGTCAGATACTGAAGAAGTTTGTATGCTTTTGAATAGT 1140
|||| |||||||| ||||||||||||||| ||||||||| || ||||||||||||||| |
Sbjct 1081 TCACACATCTGCCGTTGTGTACTGTCAGACACTGAAGAAATT-GTATGCTTTTGAATATT 1139
Query 1141 GGTCTCGATTTCAATA 1156
||||||||||||||||
Sbjct 1140 GGTCTCGATTTCAATA 1155
> AT5G64000.1 | Symbols: SAL2, ATSAL2 | Inositol monophosphatase
family protein | chr5:25616638-25618631 FORWARD LENGTH=1223
Length=1223
Score = 374 bits (202), Expect = 1e-102
Identities = 412/510 (81%), Gaps = 28/510 (5%)
Strand=Plus/Plus
Query 548 CTTTTCTTTGCTACAGTGGG---AGGTGGAGCTTACGTGCAATCGCTTGAAGGAGACTCT 604
||||||||||||||| ||| | | ||| |||||||||||||||| |||| | | |
Sbjct 594 CTTTTCTTTGCTACAACGGGTTCA-G-GGA-CTTACGTGCAATCGCTCAAAGG-CAAT-T 648
Query 605 CATCCT-CCACAGAAGGTGCAAGTGAGCAACATTGAGAATCCTGAAGAAGC-AACCTT-T 661
| | || ||||| |||||||||||||| | || |||||||| ||| ||||| || || |
Sbjct 649 C-T-CTGCCACAAAAGGTGCAAGTGAGTAGCAATGAGAATCTTGATGAAGCGAA-GTTCT 705
Query 662 GTCGAATCATCCCACAAACCAATCCCCATCCATAGCT-CCATTGCCAATAAACTTGGGAT 720
| ||||||| |||||||||||| ||||||||| | | |||||||||| ||||| |||||
Sbjct 706 -TAGAATCATACCACAAACCAATTCCCATCCAT-GGTACCATTGCCAAGAAACTCGGGAT 763
Query 721 CAAAGC-TCCACCTCTAAGAATCCATAGTCAAG-TGAAGTACGCTGCTCTAG-CTCGAGG 777
||||| | |||| |||| ||| |||| |||| | ||||| || ||| | | | |||||
Sbjct 764 TAAAGCAT-TACCTGTAAGGATCGATAGCCAAGCT-AAGTATGCGGCT-TTGTCGCGAGG 820
Query 778 AGATGCAGAGATATACTTGCGTTTCACTCTCAAAGGGTACCGTGAGTCCATATGGAACCA 837
||| ||||||||||||||||||||||||||||| || |||||||||| || ||| ||||
Sbjct 821 AGACGCAGAGATATACTTGCGTTTCACTCTCAATGGATACCGTGAGTGTATTTGGGACCA 880
Query 838 TGCTGCTGGTGCAATCATCACCACAGAAGCTGGAGGTGTAGTTTGCGATGCTG-ATGGGA 896
||| ||||| |||| ||||| |||||||||||||| ||||| || |||||| | ||||
Sbjct 881 TGCACCTGGTTCAATAATCACTACAGAAGCTGGAGGCGTAGTGTGTGATGCTACA-GGGA 939
Query 897 A-TCCTCTGGACTTCTCGAGAGGAAAGCATCTTGAACACAATACAGGGATCGTGGTCAGC 955
| || |||||||||||||| ||||||| |||||| ||||| || |||||| | || | |
Sbjct 940 AATC-TCTGGACTTCTCGAAAGGAAAGTATCTTGCTCACAAAACGGGGATCATAGTTACC 998
Query 956 ACCCAGAAGCTCATGCCACGGATCTTGAAGGCCGTCAGAGAATCCATGGAAGAGGAAAAG 1015
||| |||| |||| |||| |||| |||||||| |||||||||||||| ||||| || ||
Sbjct 999 ACCAAGAAACTCAAGCCATGGATATTGAAGGCAGTCAGAGAATCCATAGAAGAAGAGAAT 1058
Query 1016 CTTC-TCTCTGAGACGCAACTGAAACTGTA 1044
||| | |||||| | |||| |||||||||
Sbjct 1059 CTTTATTTCTGAGGCACAACAGAAACTGTA 1088
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56726615850
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5