BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487743
Length=2568
Score E
Sequences producing significant alignments: (Bits) Value
AT5G09320.1 | Symbols: VPS9B | Vacuolar sorting protein 9 (VPS9... 1838 0.0
AT3G19770.1 | Symbols: ATVPS9A, VPS9A, VPS9 | Vacuolar sorting ... 915 0.0
> AT5G09320.1 | Symbols: VPS9B | Vacuolar sorting protein 9 (VPS9)
domain | chr5:2888655-2892016 REVERSE LENGTH=2491
Length=2491
Score = 1838 bits (995), Expect = 0.0
Identities = 1184/1273 (93%), Gaps = 21/1273 (2%)
Strand=Plus/Plus
Query 1 ATGGAGAACACGGACGTCGTCTCGGGTCTGCATAATTTCTTGAGTAAACCATCCGCCAAA 60
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1 ATGGAGAACACAGACGTCGTCTCGGGTCTGCATAATTTCTTGAGTAAACCCTCCGCCAAA 60
Query 61 GATTTCATCAAATCAATTAAAAGTTTCATTGTTTCGATCTTGAACACTGCACCAGACCCT 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GATTTCATCAAATCAATCAAAAGTTTCATTGTTTCGATCTTGAACACTGCACCAGACCCT 120
Query 121 GAAAAAGATTGTGATGCAGTTCAGGAATTCTTTTCCAAGATGGAGTCTGCTTTCAGGGCT 180
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 121 GAAAAAGATTGTGATGCAGTTCAGGACTTCTTTTACAAGATGGAGTCTGCTTTCAGGGCT 180
Query 181 CATCCACTTTGGTCTGGTTGTTCCGCTGATGAGTTACACAATGCAGGAGATGGACTGGAG 240
||||||||||||||||||||||||| |||||||||| ||||||| |||||||| ||||||
Sbjct 181 CATCCACTTTGGTCTGGTTGTTCCGATGATGAGTTAGACAATGCGGGAGATGGCCTGGAG 240
Query 241 AAGTATGTCATGACAAAGTTATTTCCCCGGGTTTTTGCATCAAACACCGAGGATGTTATA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 AAGTATGTCATGACAAAGTTATTTCCCCGGGTTTTTGCATCAAACACCGAGGATGTTATA 300
Query 301 TCGGATGAGAAACTCTTTCACAAGATGTCATTATTTCAACTA-TTCATATCTCCTGAAAA 359
|| ||||||||||||||||| ||||| || || |||||| | |||||||||||||||||
Sbjct 301 TCCGATGAGAAACTCTTTCAGAAGATTTCCTTGGTTCAAC-AGTTCATATCTCCTGAAAA 359
Query 360 CTTGGATATACAACCAACTTTTCAAAACCAAACATCATGGCTCCTAGCTCAAAAAGAGCT 419
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 360 CTTGGATATACAACCAACTTTTCAAAACCAAACATCTTGGCTTCTAGCTCAAAAAGAGCT 419
Query 420 CCAGAAGATAAATATGTACAATGCTCCTCGTGATAAGCTTATGTGTATCCTTAGGTGCTG 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 CCAGAAGATAAATATGTACAATGCTCCTCGTGATAAGCTTATGTGTATCCTTAGGTGCTG 479
Query 480 CAAAGTCATTAACAACTTACTTCTAAATGCTTCAATTGCTTCAAACGAGAATGCACCTGG 539
|||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 480 CAAAGTCATTAATAACTTACTTCTAAATGCTTCAATTGCTTCAAACCAGAATGAACCTGG 539
Query 540 AGCCGACCAATTTCTTCCTGTTCTCATATATGTTACCATTAAGGCTAACCCTCCACAACT 599
||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 540 AGCTGACCAATTTCTTCCTGTTCTCATATATGTTACCATTAAGGCTAACCCTCCCCAGTT 599
Query 600 TCACTCAAACTTATTGTATATACAAAGATATAGGCGTCAATCTAAACTTGTTGGTGAAGC 659
|||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 600 TCACTCAAACTTGTTGTATATACAAAGATATAGGCGTCAATCTAAACTGGTTGGCGAAGC 659
Query 660 TGCCTACTTGTTCACAAATATACTCTCTGCAGAGTCATTCATCTCAAATATTGATGCAGA 719
|| |||||| ||||| || ||||||||||||||||||||||||||||||||||||||| |
Sbjct 660 TGGCTACTTATTCACCAACATACTCTCTGCAGAGTCATTCATCTCAAATATTGATGCAAA 719
Query 720 ATCCCTCTCAATGGATGAAGCTGACTTTGAAAATAAAATGAAATCTGCACGGGCACGTCT 779
||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 720 ATCCCTCTCCATGGATGAAGCTGACTTTGAAACTAAAATGAAATCTGCACATGCACGTCT 779
Query 780 TTCTGGTCTCGG-AAGCCAGTCTTATCAAAATGATCACGACGCTGCACT-C--ACTGCTC 835
|||||||| ||| ||||||||||||||||| ||||||| |||||| | | |||||||
Sbjct 780 TTCTGGTC-CGGGAAGCCAGTCTTATCAAACGGATCACGGTGCTGCATTACCCACTGCTC 838
Query 836 ATAATCCTAAGAGGGAAAACACGCCTCTGCATACAAAATCGTCTGATAGTCTCTCTGGTA 895
||||| ||||||||||||||| || ||||||||||||||| |||||||| |||||||||
Sbjct 839 ATAATACTAAGAGGGAAAACATGCTTCTGCATACAAAATCAACTGATAGTTTCTCTGGTA 898
Query 896 CCAATGAAACAC---------CA--A-TAAAGAAATCTGAATCCATTACCGATTTGGAAA 943
|||||||||||| || | |||||||| |||| ||||||||||||||||||
Sbjct 899 CCAATGAAACACTGAGTGAAACACCAATAAAGAAAGCTGACCCCATTACCGATTTGGAAA 958
Query 944 ATAAGGGCGCTTCTACGCTTTCGAAGGATAGAAGTGAGGCAACCAAAATCTTTCAAGAAT 1003
||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||||||||
Sbjct 959 ATAAGGGCGCTGCTACGCTTTTGAATGATAGAAGTGAGGCAACCAAAATATTTCAAGAAT 1018
Query 1004 ATCCTTACATGTTTGCCAGTGTTGGTGATTTAAAGATAGGATATGTTGAAGACTTGCTAA 1063
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 1019 ATCCTTACATGTTTGCCAGTGTTGGTGATTTAAAGATAGGAGATGTTGAAGACTTGCTTA 1078
Query 1064 ATAGTTATAAACAGCTCGTTTTCAAATATGTTTGCCTTTCCAAAGGCTTGGGTGATGCAA 1123
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 ATAATTATAAACAGCTAGTTTTCAAATATGTTTGCCTTTCCAAAGGCTTGGGTGATGCAA 1138
Query 1124 AATCTTTAGCTCCAT-CTATTTCACCATTACAAGCGTCTAAAGACTCTGACAATCATACA 1182
||||||| |||||| | ||||||||||| ||||||||||||| |||||| |||||||||
Sbjct 1139 CATCTTTAACTCCATGC-ATTTCACCATTGCAAGCGTCTAAAGTCTCTGAGAATCATACA 1197
Query 1183 ACATTGTCTTCAGATGTTCAAACGAAAAGCGAAACTGACAGTAGCGTTGATGATTTGTTC 1242
||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 1198 ACATTGTCTTCAGATTTTCAAACGAAAAGCGAAACTGACAGGAGCGTTGATAATTTGTTT 1257
Query 1243 CGGGCTCTACAAG 1255
|| ||||||||||
Sbjct 1258 CGAGCTCTACAAG 1270
Score = 1640 bits (888), Expect = 0.0
Identities = 1060/1138 (93%), Gaps = 31/1138 (3%)
Strand=Plus/Plus
Query 1458 AACGGCGAGTATGGAAGGGATTGGACTGCGAAGTTGCGGAGATGATATTCTCCGTCTCGG 1517
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1341 AACGGCGACTATGGAAGGGATTGGACTGCGAAGTTGCGGAGATGATATTCTCCGTCTCGG 1400
Query 1518 ATTTAAATTACGCGGTGGTATCGGCGGCCGGATTCCGATTCTCCGGCGAGCTATGG-GAA 1576
||| || |||||||||||| ||| |||||||||| |||||||| ||||||||||| | |
Sbjct 1401 ATTCAAGCTACGCGGTGGTACCGGTGGCCGGATTCAGATTCTCCAGCGAGCTATGGTG-A 1459
Query 1577 TAAAGATGAGAGACCGTAGCAAGAACAGGAAACCGTTGCAGAGAGGTCGAATGCTCAGTA 1636
|||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1460 TAAAAATGAGAGACCGTAGCAAGAACAGGAAACCATTGCAGAGAGGACGAATGCTCAGTA 1519
Query 1637 TCGAAGCGATTCAAGCGGTTCAAGCCCTGAAGCGAGCTAAt-c-c-tctt-ct--tcct- 1689
||||||||||||||||||||||||||||||||||||| ||| | | |||| || ||||
Sbjct 1520 TCGAAGCGATTCAAGCGGTTCAAGCCCTGAAGCGAGCCAATCCACTTCTTCCTCCTCCTC 1579
Query 1690 cc--tcc-t-t-c-t---c--cttcttcttcctcAGCTCTGGTTGATCGTGTAATCATCT 1738
|| ||| | | | | | |||||||||||||||||||| |||||||||||||||| |
Sbjct 1580 CCGTTCCTTCTACTTCCACGACTTCTTCTTCCTCAGCTCTGCTTGATCGTGTAATCATTT 1639
Query 1739 CCAAATTCCGTCGGCTCTTGAAATTCGATATGGTCGCCGTTCTCAGAGAACTTCTACGCC 1798
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1640 CTAAATTCCGTCGGCTCTTGAAATTCGATATGGTCGCCGTTCTCAGAGAACTTCTACGCC 1699
Query 1799 AAAACGAGTGCTCTCTAGCTCTCAAGGTTTTTGAAGAGATTCGAAAGGAGTATTGGTACA 1858
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1700 AAAACGAGTGCTCTCTAGCTCTCAAGGTTTTTGAAGAGATTAGAAAGGAGTATTGGTACA 1759
Query 1859 AGCCTCAGGTGAGAATGTACACAGATATGATCACTGTAATGGCGGATAATAGTTTGATGG 1918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1760 AGCCTCAGGTGAGAATGTACACAGATATGATCACTGTAATGGCGGATAATAGTTTGATGG 1819
Query 1919 AAGAGGTCAATTACCTTTACTCAGCTATGAAATCAGAAAAGGGTTTAATGGCTGACATTG 1978
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1820 AAGAGGTCAATTATCTTTACTCAGCTATGAAATCAGAAAAGGGTTTAATGGCTGAGATTG 1879
Query 1979 AATGGTTCAACACTCTCTTGACGATTCTTCT-GAATCATAAGCTGTTTGATCTTGTCATG 2037
|||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||
Sbjct 1880 AATGGTTCAACACTCTCTTGACGATTCT-CTTGAATCATAAGCTTTTTGATCTTGTCATG 1938
Query 2038 GATTGTTATGCCTTTATGCAATCTATTGGCTACGAGCCTGATAGAGCCTCCTTTAGGATT 2097
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 1939 GATTGCTATGCCTTTATGCAATCTATTGGCTATGAGCCTGATAGAGCCTCCTTTAGGGTT 1998
Query 2098 CTAGTCTTAGGTCTTGAATCAAATGGCGAAATGAGTTTATCCGCTATTGTTAGGCAAGAT 2157
||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||
Sbjct 1999 TTAGTCTTAGGTCTTGAATCAAATGGTGAAATGGGTTTATCAGCTATTGTTAGGCAAGAT 2058
Query 2158 GCTCATGAGTATTACGGTGAATCACTCGAGTTTATCCAAGAAGAGGAAGAAATCTCTAGT 2217
|||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct 2059 GCTCATGAGTATTATGGTGAATCACTCGAGTTTATCGAAGAAGATGAAGAAATCTCTAGT 2118
Query 2218 GGGACTGGTGTGTTGATCTAACAATGGAGCAAAA-ACGTTGAGAGATTGGAGCT-TTTC- 2274
|||||| |||||||||||||| ||||||| ||| | |||||||| ||| |||| ||||
Sbjct 2119 GGGACTAGTGTGTTGATCTAATGATGGAGCGAAAGA-GTTGAGAGCTTGTAGCTCTTTCT 2177
Query 2275 --ATGGTTCTATGTTCAGTCGAGCTCGAGGTTTGATCATATCGTA-TACTAATACCTTCC 2331
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2178 TCATGGTTCTATATTCAGTCGAGCTCGAGGTTTGATCATATCGTAATACTAATACCTTCC 2237
Query 2332 AAGTATGCCGGATGAGATGATGCGTTGTTAGCCAAACCATATCATGTAGGCTTGTAACAT 2391
|||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2238 GAGTATGCCCGATGAGATGATGCGTCGTTAGCCAAACCATATCATGTAGGCTTGTAACAT 2297
Query 2392 AGAAATGTTACCGAGTATGCGAGTTTTGATTGCCTGAACTAGGATCTGTTCCAAGTCACT 2451
|| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2298 AGGAATGTTACCGAGTATGCGAGTTTTGATTGCCTGAACTTGGATCTGTTCCAAGTCACT 2357
Query 2452 CAAGTCAC-CATGTCTATGGAGACATTTATAGCTTCAAATTCCATCACAATTGGAGTTTT 2510
|||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 2358 CAAGTCACTCATGTCTATGGAGACATTTATAGCTTCAAATTCCATTACAATTGAAGTTTT 2417
Query 2511 GTTATTTGTAAACCTCTTGTTGATGTTATAAGTACACTTTTGAGTATTCAAATATTTA 2568
| |||||||||| ||||||||||||||||||||||| ||| ||||| |||||||||||
Sbjct 2418 GATATTTGTAAAGCTCTTGTTGATGTTATAAGTACAATTT-GAGTAATCAAATATTTA 2474
> AT3G19770.1 | Symbols: ATVPS9A, VPS9A, VPS9 | Vacuolar sorting
protein 9 (VPS9) domain | chr3:6866806-6869475 FORWARD LENGTH=2034
Length=2034
Score = 915 bits (495), Expect = 0.0
Identities = 730/843 (87%), Gaps = 18/843 (2%)
Strand=Plus/Plus
Query 1 ATGGAGAACACGGACGTCGTCTCGGGTCTGCATAATTT-CTTGA---G-T----AAACCA 51
|||||||| ||||||||| ||| ||| |||||| |||| || || | | |||||
Sbjct 111 ATGGAGAATACGGACGTCTTCTTGGGGCTGCATGATTTCCTGGAGCGGATGCGCAAACCC 170
Query 52 TCCGCCAAAGATTTCATCAAATCAATTAAAAGTTTCATTGTTTCGA-TCTTGAACACTGC 110
|||||| |||||| ||||||| |||||||||||||||||||| | ||| ||||| |||
Sbjct 171 TCCGCCGGCGATTTCGTCAAATCCATTAAAAGTTTCATTGTTTC-ATTCTCGAACAATGC 229
Query 111 ACCAGACCCTGAAAAAGATTGTG--ATGCAGTTCAGGAATTCTTTTCCAAGATGGAGTCT 168
||||||||| ||||||||||||| ||| |||||||| |||||||| ||||||||| ||
Sbjct 230 ACCAGACCCGGAAAAAGATTGTGCTATG--GTTCAGGAGTTCTTTTCTAAGATGGAGGCT 287
Query 169 GCTTTCAGGGCTCATCCACTTTGGTCTGGTTGTTCCGCTGATGAGTTACACAATGCAGGA 228
||||||||||||||||||||||||||||||||||| | || || || | | ||| |||
Sbjct 288 GCTTTCAGGGCTCATCCACTTTGGTCTGGTTGTTCTGAGGAGGAATTGGATAGTGCTGGA 347
Query 229 GATGGACTGGAGAAGTATGTCATGACAAAGTTATTTCCCCGGGTTTTTGCATCAAACACC 288
||||| |||||||||||||| ||||||||| ||||| | ||||| ||||| ||||||||
Sbjct 348 GATGGCCTGGAGAAGTATGTTATGACAAAGCTATTTACTCGGGTGTTTGCTTCAAACACT 407
Query 289 GAGGATGTTATATCGGATGAGAAACTCTTTCACAAGATGTCATTATTTCAACTATTCATA 348
||||| |||||| | |||||||| || ||||| ||||||||||| |||||| ||||||
Sbjct 408 GAGGAGGTTATAGCTGATGAGAAGCTATTTCAGAAGATGTCATTGGTTCAACAATTCATT 467
Query 349 TCTCCTGAAAACTTGGATATACAACCAACTTTTCAAAACCAAACATCATGGCTCCTAGCT 408
||||| || || |||||||||||||||||||||||||| || | |||||||| ||||||
Sbjct 468 TCTCCCGAGAATTTGGATATACAACCAACTTTTCAAAATGAATCGTCATGGCTGCTAGCT 527
Query 409 CAAAAAGAGCTCCAGAAGATAAATATGTACAATGCTCCTCGTGATAAGCTTATGTGTATC 468
||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||
Sbjct 528 CAAAAAGAGCTCCAGAAGATAAACATGTACAAAGCTCCTCGTGATAAGCTTGTGTGTATC 587
Query 469 CTTAGGTGCTGCAAAGTCATTAACAACTTACTTCTAAATGCTTCAATTGCTTCAAACGAG 528
|||| || |||||||| ||||| |||||||| |||||||||||||||||||||||||||
Sbjct 588 CTTAACTGTTGCAAAGTGATTAATAACTTACTGCTAAATGCTTCAATTGCTTCAAACGAG 647
Query 529 AATGCACCTGGAGCCGACCAATTTCTTCCTGTTCTCATATATGTTACCATTAAGGCTAAC 588
|||||||||||||| ||| |||||||||||||| | |||||||| || || |||||||||
Sbjct 648 AATGCACCTGGAGCAGACGAATTTCTTCCTGTTTTGATATATGTAACAATAAAGGCTAAC 707
Query 589 CCTCCACAACTTCACTCAAACTTATTGTATATACAAAGATATAGGCGTCAATCTAAACTT 648
||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||
Sbjct 708 CCTCCACAACTTCACTCAAACTTGTTGTATATACAAAGGTATAGGCGTGAATCTAAACTT 767
Query 649 GTTGGTGAAGCTGCCTACTTGTTCACAAATATACTCTCTGCAGAGTCATTCATCTCAAAT 708
|||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct 768 GTTGGTGAAGCTGCGTACTTCTTCACAAACATACTCTCTGCAGAGTCTTTCATCTCAAAT 827
Query 709 ATTGATGCAGAATCCCTCTCAATGGATGAAGCTGACTTTGAAAATAAAATGAAATCTGCA 768
||||||||| |||| | ||| ||||||||||||| |||||||| || ||| ||||||||
Sbjct 828 ATTGATGCAAAATCTATTTCACTGGATGAAGCTGAGTTTGAAAAGAACATGGAATCTGCA 887
Query 769 CGGGCACGTCTTTCTGGTCTCGGA-AGCCAGTCTTATCAAAATGATCACGACGCTGCACT 827
|||||||| |||||||| | ||| |||||| ||||||||| || ||| | | ||||||
Sbjct 888 CGGGCACGAATTTCTGGTTT-GGACAGCCAGACTTATCAAACTGGTCATGGCTCTGCAC- 945
Query 828 CAC 830
|||
Sbjct 946 CAC 948
Score = 300 bits (162), Expect = 5e-80
Identities = 308/374 (82%), Gaps = 28/374 (7%)
Strand=Plus/Plus
Query 900 TGAAACACCAATAAAGAAATCTGAATCCATTACCGATTTGGAAAATAAGGGCGCTTCTAC 959
|||||||||||| |||||| ||||||||||| | |||||||||||||| || | | | ||
Sbjct 1073 TGAAACACCAATGAAGAAAGCTGAATCCATTTCAGATTTGGAAAATAA-GG-G-TGCGAC 1129
Query 960 GCTTTC-GAAGGATAGAAGTGAGGCAACCAAAATCTTTCAAGAATATCCTTACATGTTTG 1018
|| ||| ||||||| | ||| ||| |||| |||||||||||||||||||||| ||||
Sbjct 1130 GC-TTCTGAAGGAT---ACCGAGCCAAGCAAAGTCTTTCAAGAATATCCTTACATATTTG 1185
Query 1019 CCAGTGTTGGTGATTTAAAGATAGGATATGTTGAAGACTTGCTAAATAGTTATAAACAGC 1078
|||||| ||||||||| | ||||||| ||||||||| |||| ||||||||||||||||||
Sbjct 1186 CCAGTGCTGGTGATTTGAGGATAGGAGATGTTGAAGGCTTGTTAAATAGTTATAAACAGC 1245
Query 1079 TCGTTTTCAAATATGTTTGCCTTTCCAAAGGCTTGGGTGATGCAAAATCTTTAGCTCCAT 1138
|||||||||||||||| |||||| ||||||| |||||||||| || ||||||||||||||
Sbjct 1246 TCGTTTTCAAATATGTGTGCCTTACCAAAGGATTGGGTGATGGAACATCTTTAGCTCCAT 1305
Query 1139 CTATTTCACCATTACAAGCGTC-TA-------AAGAC-TCT--G-A--C--A--ATCATA 1180
| | |||||| || |||||||| | || || ||| | | | | ||||||
Sbjct 1306 CCAGTTCACCCTTGCAAGCGTCGTCCGGTTTTAATACGTCTAAGGAATCTGAGGATCATA 1365
Query 1181 CAACATTGTCTTCAGATGTTCAAACGA-AAAGCGAAACTGACAGTAGCGTTGATGATTTG 1239
|| || |||||||||||| |||| || |||| ||||||||||| || ||||||||||||
Sbjct 1366 GAAGATCGTCTTCAGATGTACAAATGACAAAG-GAAACTGACAGGAGTGTTGATGATTTG 1424
Query 1240 TTCCGGGCTCTACA 1253
|||| ||||||||
Sbjct 1425 ATCCGAGCTCTACA 1438
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127474202163
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5