BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487747 Length=1710 Score E Sequences producing significant alignments: (Bits) Value AT5G09360.1 | Symbols: LAC14 | laccase 14 | chr5:2906426-290865... 2632 0.0 > AT5G09360.1 | Symbols: LAC14 | laccase 14 | chr5:2906426-2908658 REVERSE LENGTH=1710 Length=1710 Score = 2632 bits (1425), Expect = 0.0 Identities = 1619/1714 (94%), Gaps = 8/1714 (0%) Strand=Plus/Plus Query 1 ATGGAGTTCAAGCTCAACGTTCCAAATACAATCGTTAAAACACTACAGACTATAGTCTTC 60 |||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| Sbjct 1 ATGGAGTTCAAGCTCAACATTCCAAATACAATCATTAAAACTCTACAGACTATAGTCTTC 60 Query 61 TTTCTCTTTGTTCTTCTTACATTCCAAATCGCGGAAGCCAAGATTCACCACCACACTTTC 120 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 61 TTTCTCTTTGTTCTTCTTGCATTCCAAATCGCGGAAGCCGAGATTCACCACCACACTTTC 120 Query 121 AAGATAAAGTCGAAAGCTTACACACGACTTTGTAATACCAAAAAGATATTGACGGTGAAC 180 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 121 AAGATAAAGTCGAAAGCGTACACACGACTTTGTAATACCAACAAGATATTGACGGTGAAC 180 Query 181 GGAGAATTTCCCGGACCAACGTTAAAAGCCTACCGTGGAGATAAGCTCGTCGTCAATGTC 240 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct 181 GGAGAATTTCCCGGACCAACGTTAAAAGCCTACCGTGGTGATAAGCTCATCGTCAATGTC 240 Query 241 ATCAACAACGC-AACTTACAACATTACCCTCCATTGGCACGGAGCAAGACAAATCAGGAA 299 |||||||| || ||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 241 ATCAACAATGCAAAC-TACAACATTACTCTCCATTGGCACGGAGCAAGACAAATCAGGAA 299 Query 300 TCCATGGTCGGACGGACCCGAATATGTGACTCAATGTCCGGTCCGACCAGGAGAGAGCTA 359 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 300 TCCATGGTCGGACGGACCCGAATATGTGACTCAATGTCCGATCCGACCAGGAGAGAGCTA 359 Query 360 TGTATATAAAATCGATCTTACGGTCGAAGAAGGAACGATTTGGTGGCATGCGCATAGCCA 419 ||| |||| ||||||||||| ||||||||| |||||||||||||||||||| |||||||| Sbjct 360 TGTGTATAGAATCGATCTTAAGGTCGAAGAGGGAACGATTTGGTGGCATGCTCATAGCCA 419 Query 420 ATGGGCACGTGCCACCGTCCATGGAGCTTTTATTGTCTACCCCAAACTTGGCTCATCTTA 479 |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 420 ATGGGCACGTGCCACCGTCCATGGAGCTTTCATTGTCTACCCCAAACGTGGCTCATCTTA 479 Query 480 TCCTTTTCCTAAGCCTCACCGTGAAATCCCTCTCATTTTAGGTGAATGGTGGGAGAAGGA 539 |||||||||||||||||| ||||||||||| |||||| |||| ||||||||| ||||||| Sbjct 480 TCCTTTTCCTAAGCCTCATCGTGAAATCCCGCTCATTCTAGGCGAATGGTGGAAGAAGGA 539 Query 540 AAACATAATGCATATACCAGGAAAAGCTAATAAAACCGGAGGTGAACCAGCCATCTCTGA 599 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 540 AAACATAATGCATATACCAGGAAAAGCTAATAAAACCGGAGGAGAACCGGCCATCTCTGA 599 Query 600 CGCATATACCATAAACGGACAACCCGGTTATCTATACCCCTGCTCTAAACCAGAAACATT 659 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 600 CTCATATACCATAAACGGACAACCCGGTTATCTATACCCCTGCTCTAAACCGGAAACATT 659 Query 660 CAAAATAACGGTGGTGCGTGGCCGTCGATACCTTCTTCGGATTATCAACGCCGTGATGGA 719 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 660 CAAAATAACGGTGGTGCGTGGCCGTCGATACCTTCTACGGATTATCAACGCCGTGATGGA 719 Query 720 CGAAGAACTCTTCTTTGCAATCGCAAACCACACCTTAACCGTTGTAGCCAAAGACGGTCT 779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 720 CGAAGAACTCTTCTTTGCAATCGCAAACCACACCTTAACCGTTGTAGCCAAAGACGGTTT 779 Query 780 CTACTTAAAACATTTCAAAACCAATTACCTAATGATCACTCCGGGACAATCCATGGACGT 839 ||||||||||||||||||| | |||| ||||||||||||||||||||||| |||||||| Sbjct 780 CTACTTAAAACATTTCAAATCTGATTATCTAATGATCACTCCGGGACAATCTATGGACGT 839 Query 840 CCTCCTCCATGCGAACCAACGGTCC-AACCATTACTTTGTGGCGGCTAGAGCTTACTCCT 898 |||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||||| Sbjct 840 CCTCCTCCATGCGAACCAACGG-CCTAACCACTACTTTGTGGCGGCCAGAGCTTACTCCT 898 Query 899 CTGCAGTTGGTGCCGGTTTTGACAAAACCACCACCACAGCCATCTTAAAATACAAAGGTG 958 | ||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 899 CCGCATTTGGTGCCGGTTTTGACAAAACCACCACCACAGCCATATTACAATACAAAGGTG 958 Query 959 TTTCTTTAAACCGGGGTAAACCGATTCTACCCTATCTGCCTCCTTACAATCGAACCGAGG 1018 | | ||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 959 ATACCTTAAACCGGATTAAACCGATTCTACCCTATCTGCCTCCTTACAATCGTACCGAGG 1018 Query 1019 CATCTACCCGGTTCACTAACCAATTCAGAAGTCACCGTCCGGTTAACGTCCCGGTTAAAA 1078 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1019 CATCTACCCGGTTCACTAACCAATTCAGAAGTCAGCGTCCGGTTAACGTCCCGGTTAAAA 1078 Query 1079 TCGACACCCGTCTTCTCTACGCGATCTCCGTGAACTTGATGAATTGCTCCGACGATAAAC 1138 || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1079 TCAACACTCGTCTTCTCTACGCGATCTCCGTGAACTTGATGAATTGCTCCGACGATAGAC 1138 Query 1139 CTTGTACCGGTCCGTTCGGGAAGAGATTCTCGTCGAGCATTAACAACATAAGCTTCGTGA 1198 ||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| Sbjct 1139 CTTGTACCGGTCCGTTCGGTAAGAGATTCTCTTCGAGCATTAACAACATCAGCTTCGTGA 1198 Query 1199 ACCCATCAGTCGACATTCTCCGAGCTTATTATCGCCACATCGGAGGCGTTTTCCAGGAAG 1258 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1199 ACCCATCGGTCGACATTCTCCGAGCTTATTATCGCCACATCGGAGGCGTTTTCCAGGAGG 1258 Query 1259 ATTTCCCTAGAAATCCGCCGGCGAAATTTAACTACAATTTTGAGAATCTTCCGTTTCCGA 1318 ||||||| |||||||||||| ||||||| ||||||| |||||||||||| ||||||| Sbjct 1259 ATTTCCCGAGAAATCCGCCGACGAAATTCAACTACACCGGTGAGAATCTTCCATTTCCGA 1318 Query 1319 CGAGGTTCGGGACGAAAGTGGTGGTTCTCGATTATAATTCTAGCGTCGAGCTGATTTTAC 1378 | ||||||||||||||||| ||||||||||||||||| || ||||| ||||||||| ||| Sbjct 1319 CTAGGTTCGGGACGAAAGTTGTGGTTCTCGATTATAACTCGAGCGTTGAGCTGATTCTAC 1378 Query 1379 AGGGGACGAA-CGTGTTGGCTTCAG-ATAATCACCCGATTCATCTCCATGGGTATAGCTT 1436 ||||||| || ||||| |||||| | ||| ||||||||||||||| |||||||||| ||| Sbjct 1379 AGGGGAC-AACCGTGTGGGCTTC-GAATATTCACCCGATTCATCTGCATGGGTATAACTT 1436 Query 1437 CTACGTCGTGGGTTCCGGTTTTGGGAATTTCGATCGTCGGAAAGATCCGTTGAAGTATAA 1496 ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 1437 CTACGTCGTGGGTTCGGGTTTTGGGAATTTCGATCGTCGTAAAGATCCGTTGAGGTATAA 1496 Query 1497 CCTAGTTGATCCACCGGAGGAGACCACTGTTGGTGTTCCCCGTAACGGCTGGACCGCCGT 1556 |||||||||||||||||||||||| || || |||||||| |||||||| ||||||||||| Sbjct 1497 CCTAGTTGATCCACCGGAGGAGACAACCGTCGGTGTTCCTCGTAACGGTTGGACCGCCGT 1556 Query 1557 CAGATTCGTAGCTAATAATCCAGGGGTGTGGTTGTTGCATTGCCATATAGAGAGACATGC 1616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1557 CAGATTCGTAGCTAATAATCCAGGGGTGTGGTTGTTGCATTGCCATATAGAGAGACATGC 1616 Query 1617 CACATGGGGAATGAACACAGTCTTCATAGTGAAAGATGGATCGACTAAATCATCCCGAAT 1676 ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||| || Sbjct 1617 CACATGGGGAATGAACACAGTGTTCATAGTGAAAGATGGACCGACTAAATCTTCCCGTAT 1676 Query 1677 TGTCAAGCCTCCTCCTGATCTTCCTTCTTGTTAG 1710 ||||||||||||||||||||||||||||||||| Sbjct 1677 GGTCAAGCCTCCTCCTGATCTTCCTTCTTGTTAG 1710 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84537717780 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5