BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487754
Length=3262
Score E
Sequences producing significant alignments: (Bits) Value
AT5G09410.3 | Symbols: EICBP.B | ethylene induced calmodulin bi... 3585 0.0
AT5G64220.1 | Symbols: | Calmodulin-binding transcription acti... 1541 0.0
> AT5G09410.3 | Symbols: EICBP.B | ethylene induced calmodulin
binding protein | chr5:2920827-2927420 FORWARD LENGTH=3396
Length=3396
Score = 3585 bits (1941), Expect = 0.0
Identities = 2219/2350 (94%), Gaps = 32/2350 (1%)
Strand=Plus/Plus
Query 943 ATGCAGCCTTCTAATACTGACTCAATGCTTGTGGAAGAAAATACAGACAAAGGTGGACAG 1002
||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| | |
Sbjct 1021 ATGCAGCCTTCTAATACTGACTCAATGCTGGTGGAAGAAAATTCAGAAAAAGGTGGGCGG 1080
Query 1003 TTAAAGGCAGAGCATATCAGAAATCCTC-T-----TC-A---AACT--CA--ATTA-A-- 1045
|||||||||||||||||||||||||||| | || | || | || || | |
Sbjct 1081 TTAAAGGCAGAGCATATCAGAAATCCTCTTCAAACTCAATTTAATTGGCAGGATGACACT 1140
Query 1046 -AT-TGGC--------AGCAAAATGCACAAGATAATTTTGAGACATTTTCCAGTCTCCTT 1095
|| |||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1141 GATCTGGCGTTATTTGAGCAAAGTGCACAAGATAATTTTGAGACATTTTCCAGTCTCCTT 1200
Query 1096 GGGAGTGAAAATCAGCAACCTTTTGGAATTAGTTATCAAGCTCCTCCTTCAAGTATGGAA 1155
|| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1201 GGCAGTGAAAATCTGCAACCTTTTGGAATTAGTTATCAAGCTCCTCCTTCAAATATGGAC 1260
Query 1156 TCTGAATTTATACCTGTAAAG-AAATCATTGTTAAGAAGCGAAGAGAGTTTGAAAAAAGT 1214
||||||| ||| ||||||| | |||| |||| |||||||||||| ||||||||||||||
Sbjct 1261 TCTGAATATATGCCTGTAATGAAAAT-ATTGCGAAGAAGCGAAGATAGTTTGAAAAAAGT 1319
Query 1215 CGATAGTTTTTCTCGGTGGGCTAGTAAAGAACTTGGCGAGATGGAGGATTTGCAGATGCA 1274
||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 1320 CGATAGTTTTTCTAAGTGGGCTATTAAAGAACTTGGGGAGATGGAGGATTTGCAGATGCA 1379
Query 1275 GTCTTCACGTGGAGATATTGCATGGACCACTGTTGAATGTGAGACTGCAGCAGCCGGGAT 1334
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1380 GTCTTCACGTGGAGATATTGCATGGACCACTGTTGAATGTGAAACTGCAGCAGCTGGGAT 1439
Query 1335 CTCCTTGAGCCCTTCTCTCTCTGAGGATCAGCGTTTCACCATAGTTGATTTTTGGCCAAA 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 CTCCTTGAGCCCTTCTCTCTCTGAGGATCAGCGTTTCACCATAGTTGATTTTTGGCCAAA 1499
Query 1395 ATGCGCACAGACTGACGCAGAAGTGGAGGTCATGGTTATTGGGACATTTCTGCTTAGTCC 1454
| | ||| |||| ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 1500 AAGTGCAAAGACAGACGCAGAAGTTGAGGTCATGGTTATTGGGACATTTCTACTTAGTCC 1559
Query 1455 GCAAGAAGTAACAAAATATAACTGGTCATGCATGTTTGGTGAAGTGGAGGTTCCTGCTGA 1514
|||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 1560 GCAAGAAGTAACTAAATATAATTGGTCATGCATGTTTGGTGAAGTGGAAGTTCCTGCTGA 1619
Query 1515 GATTTTAGTAGACGGCGTTCTTTGCTGTCATGCTCCACCGCATACAGCTGGTCAAGTGCC 1574
|||||||||||| || |||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1620 GATTTTAGTAGATGGTGTTCTTTGCTGTCATGCTCCACCGCATACAGCTGGTCACGTCCC 1679
Query 1575 CTTTTATGTTACATGTTCCAACAGATTTGCTTGCAGTGAAGTACGAGAATTTGATTTCCT 1634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1680 CTTTTATGTTACATGTTCCAACAGATTTGCTTGCAGTGAAGTACGAGAATTTGATTTCCT 1739
Query 1635 TTCTGGTTCTACCCAAAAAATTGATGCTACTGATGTTTATGGTACCTATACAAATGAAGC 1694
||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 1740 TTCTGGTTCTACCCAAAAAATCAATGCTACAGATGTTTATGGTACCTATACAAATGAAGC 1799
Query 1695 ATCACTTCAGTTGCGGTTTGAGAAGATGCTTGCTCACAGAAATTTTGTTCACGAACATCA 1754
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 1800 ATCACTTCAGTTGCGGTTTGAGAAGATGCTTGCTCACAGGGATTTTGTTCACGAACACCA 1859
Query 1755 TATATTTGAAGATGTTGGGGAGAAACGAAGAAAAATCAGTAAAATTATGTCACTAAAGGA 1814
|||||| |||||||||||||| ||||||||| |||||||||||||||||| ||||||||
Sbjct 1860 TATATTCGAAGATGTTGGGGACAAACGAAGACAAATCAGTAAAATTATGTTGCTAAAGGA 1919
Query 1815 GGAGAAAGAGTATCTCCTTTCTGGGACATATCAGAGAGATTCAATCAAACAAGAACCAAA 1874
||||||||||||||||||| | ||||||||||||||||| |||| |||||||||||||||
Sbjct 1920 GGAGAAAGAGTATCTCCTTCCAGGGACATATCAGAGAGACTCAACCAAACAAGAACCAAA 1979
Query 1875 AGGACAGCTTTTCAGGGAACAGTTTGAAGAAGAACTATATATATGGCTCATCCATAAAGT 1934
|||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 1980 AGGACAGCTTTTTAGGGAACTGTTTGAAGAAGAACTATATATATGGCTCATACATAAAGT 2039
Query 1935 GACTGAAGAGGGTAAAGGTCCAAACATACTGGATGAAGATGGACAGGGTATTTTACACTT 1994
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2040 GACTGAAGAGGGTAAAGGTCCAAACATATTGGATGAAGATGGACAGGGTATTTTACACTT 2099
Query 1995 TGTTGCAGCGCTTGGGTACGATTGGGCCATTAGACCGATGCTAGCAGCGGGAGTTAACAT 2054
|||||||||||||||||| || |||||||||| |||| || ||||||| |||||||||||
Sbjct 2100 TGTTGCAGCGCTTGGGTATGACTGGGCCATTAAACCGGTGTTAGCAGCAGGAGTTAACAT 2159
Query 2055 TAACTTCCGTGATGCCAATGGCTGGTCTGCCCTTCATTGGGCTGCGTTTAGTGGCAGGGA 2114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2160 TAACTTCCGTGATGCCAATGGCTGGTCTGCCCTTCATTGGGCTGCGTTTAGTGGCAGGGA 2219
Query 2115 GGAAACTGTCGCTGTGCTTGTCTCTCTAGGTGCTGATGCTGGGGCATTGACGGATCCATC 2174
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2220 GGAAACTGTCGCTGTGCTTGTCTCTCTAGGTGCTGATGCTGGGGCATTAACGGATCCATC 2279
Query 2175 TCCAGAGCTTCCATTGGGTAAAACAGCAGCTGATTTGGCTTACGCAAATGGACACAGGGG 2234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2280 TCCAGAGCTTCCATTGGGTAAAACAGCAGCTGATTTGGCTTACGCAAATGGACACAGGGG 2339
Query 2235 AATTTCGGGTTTTCTTGCAGAGTCTTCCTTAACTAGTTATCTTGAAAAGCTAACAGTGGA 2294
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2340 AATTTCGGGATTTCTTGCAGAGTCTTCCTTAACTAGTTATCTTGAAAAGCTAACAGTGGA 2399
Query 2295 CTCAAAGGAAAATAGCCCTGCCAACTCTTCTGGAGCAAAAGCTGTTCAAACAGTCTCTGA 2354
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 2400 CTCAAAGGAAAATAGCCCTGCCAACTCTTGTGGAGAAAAAGCTGTTCAAACAGTCTCTGA 2459
Query 2355 GCGAACCGCTGCTCCTATGAGCTATGGCGATGTACCAGAAAAACTTTCCTTGAAGGATTC 2414
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 2460 GCGAACCGCTGCTCCTATGACCTATGGCGATGTACCAGAGAAACTTTCCTTGAAGGATTC 2519
Query 2415 ACTTACCGCTGTCCGTAATGCTACACAAGCGGCTGATCGTCTCCATCAAGTATTCAGGAT 2474
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2520 ACTTACTGCTGTCCGTAATGCTACGCAAGCGGCTGATCGTCTCCATCAAGTATTCAGGAT 2579
Query 2475 GCAATCATTCCAGCGGAAACAGCTGTCTGATATCGGCGATGATGACAAGATTGATATCTC 2534
|||||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||||||
Sbjct 2580 GCAATCATTCCAACGGAAACAGCTGTGTGATATTGGCGATGATGAAAAGATTGATATCTC 2639
Query 2535 CGATAAGTTAGCTGTTTCTTTTGCAACTT-TGAAAACTAAGAATCTAGGACAGGGTGATG 2593
||| |||||||||||||||||||| ||| | ||||||||||||| ||||||||||||||
Sbjct 2640 CGACCAGTTAGCTGTTTCTTTTGCAGCTTCT-AAAACTAAGAATCCAGGACAGGGTGATG 2698
Query 2594 TTTCTCTTAGTTCTGCTGCCACCCATATCCAGAAGAAATATCGTGGTTGGAAGAAGAGAA 2653
| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2699 TCTCTCTTAGTTGTGCTGCTACCCATATCCAGAAGAAATATCGTGGTTGGAAGAAGAGAA 2758
Query 2654 AAGAGTTTCTTTTAATCCGACAAAGAATCGTTAAAATTCAGGCTCATGTGAGAGGACATC 2713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2759 AAGAGTTTCTTTTAATCCGACAAAGAATCGTTAAAATTCAGGCTCATGTGAGAGGACATC 2818
Query 2714 AGGTCCGGAAACAATACCGAACAGTCATCTGGTCTGTGGGATTACTCGAAAAAATCATTT 2773
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2819 AGGTCCGGAAACAATACCGAACAGTCATCTGGTCTGTGGGATTACTCGAGAAAATCATTT 2878
Query 2774 TGCGTTGGAGACGCAAAGGTAATGGCTTGAGAGGGTTTAAACGCAATGCAGTCGCCAAAA 2833
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2879 TGCGTTGGAGACGCAAAGGTAATGGTTTGAGAGGGTTTAAACGCAATGCAGTCGCCAAAA 2938
Query 2834 CCGTGGAACCGGAACCACCTGTATCAGCTATATGTCCCACAATCCCACAGGAAGATGAGT 2893
|||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||
Sbjct 2939 CCGTGGAACCGGAACCGCCTGTATCAGCTATATGTCCTAGGATCCCACAGGAAGATGAGT 2998
Query 2894 ATGATTATCTTAAAGAGGGAAGAAAACAAACAGAGGAAAGGCTTGAGAAGGCTCTGACTC 2953
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2999 ATGATTATCTTAAAGAGGGAAGAAAACAAACAGAGGAAAGGCTACAGAAGGCTCTGACTC 3058
Query 2954 GGGTGAAGTCGATGGTTCAATACCCAGAAGCACGGGATCAATACCGTAGACTCCTAACGG 3013
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3059 GTGTTAAGTCGATGGTTCAATACCCAGAAGCACGGGATCAATACCGTAGACTCCTAACGG 3118
Query 3014 TTGTCGAGGGCTTCCGTGAAAATGAGGCTTCATCAAGTGCATCTATAAACAATAAAGAAG 3073
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3119 TTGTTGAGGGCTTCCGTGAAAATGAGGCTTCATCAAGTGCATCTATAAACAATAAAGAAG 3178
Query 3074 AAGAAGAAGTCAACTGTGAAGAAGACGAGTTTATTGACATTGACTCTCTTTTGAACGATG 3133
|||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 3179 AAGAAGCAGTCAACTGTGAAGAAGACGATTTTATTGACATTGAGTCTCTTTTGAACGATG 3238
Query 3134 ACACATTGATGATGTCTATTTCTCCTTGattttacattctgactcgtattcatttttc-t 3192
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 3239 ACACATTGATGATGTCTATTTCTCCTTGATTTTACTTTCTGACTCGTATTCATTTTTCCT 3298
Query 3193 tcttttactttctaactttatttcttctctGTAAATATAATAGTTGATATTTACCGTTTA 3252
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 3299 TCTTTTACTTTCTAACTTTATTTCTTCTCTGTAAATACCATAGTTGATATTTACCGCTTA 3358
Query 3253 ATTTATTACT 3262
||||||||||
Sbjct 3359 ATTTATTACT 3368
Score = 835 bits (452), Expect = 0.0
Identities = 513/542 (95%), Gaps = 5/542 (1%)
Strand=Plus/Plus
Query 1 aaaaaaaTCGCTATCGTTTTCACACCTGGATATAGCCCGAAACCAAGGAAACAGGATTAT 60
|||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 78 AAAAAAATCGGTATCGTTTTCACACCTGGATATAGCCCGAAACGAAGGAAACAAGATTAT 137
Query 61 AAGCTTCTTAGTTCATGCATACTCAGATCGGTTAGGGTTCGTTGATTCTCTCTTTGTGAT 120
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 138 AAGCTTCTCAGTTCATGCATACTCAGATCGGTTAGGGTTCGTTGATTCTCT-TTT-TGAT 195
Query 121 TACGAAAGCTTGAGATCTCttttggttgttttttgggttttttCTTCTATGGTGGATCGC 180
||||||||||| |||||||||||||| | ||||||||||| | | |||||||||||||||
Sbjct 196 TACGAAAGCTTAAGATCTCTTTTGGTGGATTTTTGGGTTTATCCATCTATGGTGGATCGC 255
Query 181 GGATCTTTTGGCTTTATTAGTCCT-C-CT-CAATTAGATATGGAACAGTTGCTGTCAGAA 237
|||||||||||| ||| | |||| | || ||||||||||||||||||||||||||||||
Sbjct 256 AGATCTTTTGGCTCTATAACTCCTCCTCTCCAATTAGATATGGAACAGTTGCTGTCAGAA 315
Query 238 GCTCAACACAGGTGGCTTAGGCCTTCTGAGATTTGTGAAATTCTTCAGAACTATCACAAG 297
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 316 GCCCAACACAGGTGGCTTAGGCCTACTGAGATTTGTGAAATTCTTCAGAACTATCACAAG 375
Query 298 TTTCATATAGCATCAGAGTCTCCCACCCGACCCGCCAGTGGTTCACTGTTTCTTTTTGAT 357
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 376 TTTCATATAGCATCAGAGTCTCCCACCCGACCCGCCAGTGGTTCACTTTTTCTTTTTGAT 435
Query 358 AGGAAGGTGCTGAGATATTTTAGGAAAGACGGACATAATTGGAGGAAGAAGAAGGATGGT 417
|||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 436 AGGAAGGTACTGAGATATTTTAGGAAAGACGGACATAACTGGAGGAAGAAGAAAGATGGT 495
Query 418 AAAACCATAAAAGAAGCTCATGAGAAGCTCAAGGTAGGAAGCGTAGATGTGCTACATTGT 477
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 496 AAAACCATAAGAGAAGCTCATGAGAAGCTCAAGGTAGGAAGCATAGATGTGCTACATTGT 555
Query 478 TACTATGCACATGGGGAAGGCAACGAGAATTTTCAGAGACGTTGCTACTGGATGCTTGAA 537
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 556 TACTATGCACATGGGGAAGCCAACGAGAATTTCCAGAGACGTTGCTACTGGATGCTTGAA 615
Query 538 CA 539
||
Sbjct 616 CA 617
Score = 459 bits (248), Expect = 1e-127
Identities = 292/311 (94%), Gaps = 11/311 (4%)
Strand=Plus/Plus
Query 542 ATTTGATGCATATCGTTTTCGTACACTACTTGGAGGTTAAGGGTAATCGGACCAGTATAG 601
||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||
Sbjct 710 ATTTGATGCATATCGTTTTTGTGCACTACTTGGAGGTTAAGGGTAACCGGACCAGTATAG 769
Query 602 GAATGAAAGAAAACAATTCAAATTCTGTAAATGGCACAGCTTCAGTGAATATTGATTCAA 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 770 GAATGAAAGAAAACAATTCAAATTCTGTAAATGGCACAGCTTCAGTGAATATTGATTCAA 829
Query 662 CGGCAAGCCCAACTAGCACATTGTCATCATTATGTGAAGATGCTGATAC--T---GG-G- 714
| ||||||||||||||||||||||||||||||||||||||||||||||| | || |
Sbjct 830 CAGCAAGCCCAACTAGCACATTGTCATCATTATGTGAAGATGCTGATACCGTTTTGGTGC 889
Query 715 -G---ATAGTCATCAAGCAAGTTCCGTCTTACGAGCATCTTCTGAACCTCAAACTGGAAA 770
| ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 890 AGGGGATAGTCAACAAGCAAGTTCCGTCTTACGACCATCTCCTGAACCTCAAACTGGAAA 949
Query 771 TCGCTATGGTTGGACACCAGCTCCTGGCATGCGTAATGTTTCACAGGTTCATGGGAACAG 830
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 950 TCGCTATGGTTGGACACCTGCTCCTGGCATGCGTAATGTTTCACAGGTTCATGGGAACAG 1009
Query 831 AGTCAGAGAAA 841
|||||||||||
Sbjct 1010 AGTCAGAGAAA 1020
> AT5G64220.1 | Symbols: | Calmodulin-binding transcription activator
protein with CG-1 and Ankyrin domains | chr5:25686246-25692215
FORWARD LENGTH=3517
Length=3517
Score = 1541 bits (834), Expect = 0.0
Identities = 1634/2009 (81%), Gaps = 100/2009 (5%)
Strand=Plus/Plus
Query 1177 AAATCATTGTTAAGAAGCGAAGAGAGTTTGAAAAAAGTCGATAGTTTTTCTCGGTGGGCT 1236
||| ||||||||| || || || ||||||||||| || || ||||| |||||||||| |
Sbjct 1238 AAAGCATTGTTAAAAAAAGAGGATAGTTTGAAAAAGGTTGACAGTTTCTCTCGGTGGGTT 1297
Query 1237 AGTAAAGAACTTGGCGAGATGGAGGATTTGCAGATGCAGTCTTCA-CGTGGAGATATTGC 1295
|||||||||||||| |||||||| || ||||||||||| |||||| | ||||| ||||||
Sbjct 1298 AGTAAAGAACTTGGGGAGATGGAAGACTTGCAGATGCAATCTTCATC-TGGAGGTATTGC 1356
Query 1296 ATGGACCACTGTTGAATGTG-AGACTGCAGCAGCCGGGATC-TCCTTGAGCCCTTCTCTC 1353
|||||| |||||||||||| | || |||||||| ||| || ||||| || ||||||||
Sbjct 1357 ATGGACTTCTGTTGAATGTGAAAAC-GCAGCAGCTGGG-TCTTCCTTAAGTCCTTCTCTG 1414
Query 1354 TCTGAGGATCAGCGTTTCACCATAG-TTGATTTTTGGCCAAAATGCG-CACAGACTGACG 1411
|| ||||||||||| ||||| || | | || |||||||| ||||| | | ||||| |||
Sbjct 1415 TCCGAGGATCAGCGCTTCACTAT-GATCGACTTTTGGCCCAAATG-GACTCAGACAGACT 1472
Query 1412 CAGAAGTGGAGGTCATGGTTATTGGGACATTTCTGCTT-AGTCCGCAAGAAGTAACAAAA 1470
||||||| ||||| |||||||| |||||||||||| || ||||| || |||||||| |
Sbjct 1473 CAGAAGTTGAGGTAATGGTTATCGGGACATTTCTG-TTGAGTCCTCAGGAAGTAACTAGC 1531
Query 1471 TATAACTGGTCATGCATGTTTGGTGAAGTGGAGGTTCCTGCTGAGATTTTAGTAGACGGC 1530
|||| |||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||
Sbjct 1532 TATAGCTGGTCATGCATGTTTGGAGAAGTGGAGGTTCCGGCTGATATTTTAGTAGATGGT 1591
Query 1531 GTTCTTTGCTGTCATGCTCCACCGCAT-ACAGCT-GGTCAAGTGCCC-TTTTATGTTACA 1587
|||||||| ||||||||||| || ||| | || | |||| ||| ||| || ||| | |||
Sbjct 1592 GTTCTTTGTTGTCATGCTCCGCCACATGA-AG-TCGGTCGAGT-CCCGTTCTATATAACA 1648
Query 1588 TGTTCCAACAGATTTGCTTGCAGTGAAGTACGAGAATTTGATTTCCTTTCTGGTTCTACC 1647
||||| |||||||| |||||||||||||||||||||| ||||||||| |||| |||| |
Sbjct 1649 TGTTCTGACAGATTTTCTTGCAGTGAAGTACGAGAATTCGATTTCCTTCCTGGGTCTA-C 1707
Query 1648 CAAAAAATT-GATGCTACTGATGTTTATGGTACCTATACAAATGAAGCATCACTTCAGTT 1706
|| ||| || |||||||||| |||||||| || |||||| |||| ||||||| || ||
Sbjct 1708 CAGAAAGTTAAATGCTACTGACATTTATGGTGCCAATACAATTGAAACATCACTCCATTT 1767
Query 1707 GCGGTTTGAGAAGATGCTTGCTCACAGAAATTTTGTTCACGAACATCATATATTTGAAGA 1766
||||||||| || |||| |||| |||| || |||||| ||||| |||||||||||| |
Sbjct 1768 GCGGTTTGAAAACTTGCTGGCTCTCAGATGTTCTGTTCAGGAACACCATATATTTGAAAA 1827
Query 1767 TGTTGGGGAGAAACGAAGAAAAATCAGTAAAATTATGTCACTAAAGGAGGAGAAAGAGTA 1826
||||||||||||||||||||||||||| ||||| |||| |||||||| || ||||||
Sbjct 1828 TGTTGGGGAGAAACGAAGAAAAATCAGCAAAATCATGTTGCTAAAGGATGAAAAAGAGC- 1886
Query 1827 TCTCCTTTCTG-GGA-CATATC-AGAGAGAT-TCAATCAAA-CAAGAACCAAAAG-GACA 1880
||||| || ||| || || ||| |||| | || || | | ||| |||||| | |
Sbjct 1887 -CTCCTCTCCCCGGAACA-ATTGAGAAAGATCT-AA-CAGAGCTGGAAGCAAAAGAG-C- 1940
Query 1881 GCTT--TTCAGGGAACAGTTTGAAGA-AGAACTATATATATGGCTCATCCATAAAGTGAC 1937
| || || |||||| |||||||||| | || ||||| | |||||||||||||| |||||
Sbjct 1941 GATTGATT-AGGGAAGAGTTTGAAGATA-AATTATATCTGTGGCTCATCCATAAGGTGAC 1998
Query 1938 TGAAGAGGGTAAAGGTCCAAACATACTGGATGAAGATGGACAGGGTATTTTACACTTTGT 1997
||||||||| || |||||||| ||| | |||||||||||||||||| || ||||| | |
Sbjct 1999 TGAAGAGGGCAAGGGTCCAAATATATTAGATGAAGATGGACAGGGTGTTCTACACCTAGC 2058
Query 1998 TGCAGCGCTTGGGTACGATTGGGCCATTA-GACCGATGCT-AGCAGCGGGAGTTAACATT 2055
|||||||| ||||| |||||||| || | | || || || |||||| ||||||| |||
Sbjct 2059 CGCAGCGCTGGGGTATGATTGGGCGATAAAG-CCAAT-CTTAGCAGCAGGAGTTAGCATC 2116
Query 2056 AACTTCCGTGATGCCAATGGCTGGTCTGCCCTTCATTGGGCTGCGTTTAGTGGCAGGGAG 2115
|||||||| ||||| ||||| |||||||| ||||| |||||||| || ||||||||||||
Sbjct 2117 AACTTCCGCGATGCAAATGGGTGGTCTGCTCTTCACTGGGCTGCATTCAGTGGCAGGGAG 2176
Query 2116 GAAACTGTCGCTGTGCTTGTCTCTCTAGGTGCTGATGCTGGGGCATTGACGGATCCATCT 2175
|| ||||||||||| |||||||| || |||||||||||||| |||||| |||| ||||||
Sbjct 2177 GATACTGTCGCTGTACTTGTCTCACTGGGTGCTGATGCTGGAGCATTGGCGGACCCATCT 2236
Query 2176 CCAGAGCTTCCATTGGGTAAAACAGCAGCTGATTTGGCTTACGCAAATGGACACAGGGGA 2235
||||| | ||| ||||| |||||||| ||||| |||||||| | ||| ||||||||||||
Sbjct 2237 CCAGAACATCCTTTGGGGAAAACAGCTGCTGACTTGGCTTATGGAAACGGACACAGGGGA 2296
Query 2236 ATTTCGGGTTTTCTTGCAGAGTCTTCCTTAACTAGTTATCTTGAAAAGCTAACAGTGGAC 2295
|| |||||||| ||||||||||| ||| | ||||| || |||||||| ||||||||||||
Sbjct 2297 ATATCGGGTTTCCTTGCAGAGTCATCCCTCACTAGCTACCTTGAAAAACTAACAGTGGAC 2356
Query 2296 TCAAAGGAAAATAGC-CCTGCCAACTCTTCTGGAGCAAAAGCTGTTCAAACAGTCTCTGA 2354
| |||||||| ||| || || |||| ||||||||||||||||||| ||||| ||||
Sbjct 2357 GCTAAGGAAAACAGCTCC-GCTGACTCCTCTGGAGCAAAAGCTGTTCTGACAGTAGCTGA 2415
Query 2355 GCGAACCGCTGCTCCTATGAGCTATGGCGATGTACCAGAAAAACTTTCCTTGAAGGATTC 2414
|||||| ||| |||||||||| ||||| ||||||||||||| |||||| ||||||||||
Sbjct 2416 GCGAACAGCTACTCCTATGAGTTATGGTGATGTACCAGAAACACTTTCGATGAAGGATTC 2475
Query 2415 ACTTACCGCTGTCCGTAA-TGCTACACAAGCGGCTGATCGTCTCCATCAAGTATTCAGGA 2473
|||||| |||||| ||| |||||||||||| ||||||||||| |||||||| ||||| |
Sbjct 2476 ACTTACTGCTGTCT-TAAATGCTACACAAGCAGCTGATCGTCTTCATCAAGTGTTCAGAA 2534
Query 2474 TGCAATCATTCCAGCGGAAACAGCTGTCTGATA-TCGGCGATGATGACAAGATT-GATAT 2531
|||| || ||||||||||||||||| ||||| | | || | || |||| ||| |||||
Sbjct 2535 TGCAGTCGTTCCAGCGGAAACAGCTCTCTGA-ACTTGGTGGCGACAACAA-ATTCGATAT 2592
Query 2532 CTCCGATAAGTTAGCTGTTTCTTTTGCAACTTTGAAA-ACTAAGAA-TCTAGGACAGGGT 2589
|||||| |||||||||| |||||||| || ||| |||||||| || |||||| ||
Sbjct 2593 ATCCGATGAGTTAGCTGTGTCTTTTGCGGCTGC-AAAGACTAAGAAGTC-AGGACACAGT 2650
Query 2590 -GATGTTTCTCTT-AGTTCTGCTGCCACCCATATCCAGAAGAAATATCGTGGTTGGAAGA 2647
| || | || || | | ||||||| || |||||||| ||||| |||||||||||||
Sbjct 2651 AG-TGGTGCTGTTCA-TGCTGCTGCGGTTCAAATCCAGAAAAAATACCGTGGTTGGAAGA 2708
Query 2648 AGAGAAAAGAGTTTCTTTTAATCCGACAAAGAATCGTTAAAATTCAGGCTCATGTGAGAG 2707
||||||| ||||| ||| | ||||||||||||||||| || |||||||||||||||||||
Sbjct 2709 AGAGAAAGGAGTTCCTTCTGATCCGACAAAGAATCGTCAAGATTCAGGCTCATGTGAGAG 2768
Query 2708 GACATCAGGTCCGGAAACAATACCGAAC-AGTCATCTGGTCTGTGGGATTACTCGAAAAA 2766
||||||| ||||| |||||||||||| | | | || ||||| || ||||| || || |||
Sbjct 2769 GACATCAAGTCCGAAAACAATACCGAGCCATT-ATTTGGTCCGTAGGATTGCTTGAGAAA 2827
Query 2767 ATCATTTTGCGTTGGAGACGCAAAGGTAATGGCTTGA-GAGGGTTT-AAACGCAATGCAG 2824
||||| ||||| ||||| || ||||||| |||||| | | || ||| ||||| || ||
Sbjct 2828 ATCATCTTGCGATGGAGGCGTAAAGGTAGTGGCTT-ACGCGG-TTTCAAACGTGATACAA 2885
Query 2825 TC-GCCAAAACCGTGGAACCGGAACCACCTGTATCAGCTATATGTCCCACAATCCCACAG 2883
|| || || || ||| | |||| ||||| | | || ||| || | | ||
Sbjct 2886 TCAGC-AAG-CC----AACAG-AACC---TGTAT--G-TCC-TG-CCC-CA--C--A-AG 2924
Query 2884 GAAGATGAGTATGATTATCTTAAAGAGGGAAGAAAACAAACAGAGGAAAGGCTTGAGAAG 2943
||||||| ||||||| ||| || || ||||| ||||||||||||||||||||| | |||
Sbjct 2925 -AAGATGATTATGATTTTCTCAAGGAAGGAAGGAAACAAACAGAGGAAAGGCTTCAAAAG 2983
Query 2944 GCTCTGACTCGGGTGAAGTCGATGGTTCAATACCCAGAAGCACGGGATCAATACCGTAGA 3003
||||| || || |||||||| |||| |||||| ||||| ||||||| |||||||||||||
Sbjct 2984 GCTCTAACCCGAGTGAAGTCTATGGCTCAATATCCAGAGGCACGGGCTCAATACCGTAGA 3043
Query 3004 CTCCTAACGGTTGTCGAGGGCTTCCGTGAAAATGAGGCTTCATCAAG-T-G-CATCT-AT 3059
|| | || || || || ||||||||||| || |||||||| || || | | ||| | |
Sbjct 3044 CTATTGACTGTCGTTGAAGGCTTCCGTGAGAACGAGGCTTCTTCTAGCTCGGCAT-TGAA 3102
Query 3060 AAACAATAAAGAAGAAGAAG-AAGT--CAACTGTGAAGAAGACGAGTTTA-TTGACATTG 3115
|||||| | ||| |||| | || | |||| | |||||||||| |||| |||||||||
Sbjct 3103 AAACAACACAGAGGAAGCTGCAAATTACAAC-G--AAGAAGACGA-TTTAATTGACATTG 3158
Query 3116 ACTCTCTTTTGAACGATGACACATTGATG 3144
| ||||||||| | || ||||| || |||
Sbjct 3159 ATTCTCTTTTGGATGACGACACTTTCATG 3187
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 162290060605
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5